RPSBLAST alignment of GI: 254780660 and protein with PDBid: 1mw7

>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1 Length = 240

 Score =  234 bits (599), Expect = 1e-62
 Identities = 78/238 (32%), Positives = 124/238 (52%), Gaps = 8/238 (3%)

Query: 7   FKNIMHRKERKDALKSKIFSKLSREITVSAKLSGQNPLENPRLRLAIQNAKNQSMPKENI 66
           F+     KE++    SK+F KL++ IT++AK  G  P  N +LR AI NAK Q+MPK+NI
Sbjct: 5   FEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNI 64

Query: 67  ERAIKKAGSDDLGNYTNIRYEGYGPEGVAIIIEALTDNRNRTASSIRSIFTKANG-SLGS 125
           + AIK+A S + GN + I YEG    GV II+E +TDN  RT ++++S F K  G S+  
Sbjct: 65  DAAIKRASSKE-GNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123

Query: 126 TGSTTRFFEQIGEIIYHSNIGDSNLAME-----VAIESDAFEVLFEDQEYIFYCDFNNVG 180
            GS    F +        N  ++            I+    E+   + + I   D+N+  
Sbjct: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFK 183

Query: 181 LTSKKLEEKIGEAQSIKVIWKPLNYIRLSNADKVKSIIKMIENLEDDDDVQSVYSNLE 238
           L ++  E          +       I L N ++++   K+++ +EDDDDV ++Y+N+E
Sbjct: 184 LLNEGFESLKLPILKASLQRIATTPIEL-NDEQMELTEKLLDRIEDDDDVVALYTNIE 240