HHsearch alignment for GI: 254780661 and conserved domain: PRK06887

Probab=98.07  E-value=0.0002  Score=47.16  Aligned_cols=158  Identities=17%  Similarity=0.131  Sum_probs=92.1

Q ss_pred             CCEEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCC---CCCCH----HHHHHHCCCHHHHHHCCCCH
Q ss_conf             837999752788987726048999999838972804002266217888---77857----89898579988996079997
Q gi|254780661|r    3 NHFVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADD---YLPDP----EAVFITGITPQKALRDGVVE   75 (471)
Q Consensus         3 ~~~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~---~~p~p----~a~~v~git~~~~~~~~~~~   75 (471)
T Consensus       356 ~~~va~DtEt~~ld~~~a~lVGis~s~--~~g~a------~Yi-Pl~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~  426 (954)
T PRK06887        356 AKLIAVDTETDSLDYMSANLVGISFAL--ENGEA------CYI-PLAHKQQVAEQPQSDLFAEEAETQTDYLLAPKQLNK  426 (954)
T ss_pred             CCEEEEEEECCCCCCCCCCEEEEEEEE--CCCCE------EEE-ECCCCCCCCCCCCHHHHHHCCCCHHHHHCCHHHCCH
T ss_conf             792799963599871326657899983--58978------998-644421000132002332001001222102321279


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99999999995117965999505578999999999850785321325688710015888865556532100244444544
Q gi|254780661|r   76 AEFSRRIHQFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGA  155 (471)
Q Consensus        76 ~e~~~~i~~~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~~  155 (471)
T Consensus       427 ~~vl~~Lkplled~~i~KIghN-lK~dl~vL~----~~Gi~l-------~g~~fDTmLAa---YLLdp~---------~-  481 (954)
T PRK06887        427 STCLAALKPLLENPDIHKIGQN-IKYDLTIFA----NHGIEL-------QGVAFDTMLES---YTLNST---------G-  481 (954)
T ss_pred             HHHHHHHHHHHCCCCCCHHHHH-HHHHHHHHH----HCCCCC-------CCCCCCHHHHH---HHHCCC---------C-
T ss_conf             9999998998529750222114-788999999----779624-------77651698998---751875---------5-


Q ss_pred             CCCCHHHHHHHH-CCC---------------------CCC-CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             331089899871-887---------------------643-1013331899999999998642
Q gi|254780661|r  156 TSFKLQDLALAN-GIE---------------------HVN-AHDAKADVYATLALVWLIREKK  195 (471)
Q Consensus       156 ~~~kL~~la~~n-~i~---------------------~~~-aH~A~~D~~~t~~l~k~i~~~~  195 (471)
T Consensus       482 -r~~Ld~LA~~yL~~~~i~~edl~gkGk~ql~f~~v~l~~~~~YAaedA~itl~L~~~L~~~L  543 (954)
T PRK06887        482 -RHNMDDLAERYLGHETIAFESIAGKGKNQLTFDQIPLEQATEYAAEDADVTMKLHQVLWLEL  543 (954)
T ss_pred             -CCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -57889999996388653346422544333784434467999999999999999999999999