HHsearch alignment for GI: 254780661 and conserved domain: PRK11779
>PRK11779 sbcB exonuclease I; Provisional.
Probab=100.00 E-value=0 Score=931.99 Aligned_cols=470 Identities=56% Similarity=1.001 Sum_probs=457.3
Q ss_pred CCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHH
Q ss_conf 98837999752788987726048999999838972804002266217888778578989857998899607999799999
Q gi|254780661|r 1 MTNHFVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFSR 80 (471)
Q Consensus 1 m~~~~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~~ 80 (471)
T Consensus 5 ~~~~f~fyD~ETtG~~~~~dqi~Qfa~i~td~~ln~i~~~~~~~c~~~~~~lP~p~A~lvt~itp~~~~~~~~~~~~~~~ 84 (477)
T PRK11779 5 MQPTFLWHDYETFGANPALDRPAQFAGIRTDADLNIIGEPLVFYCKPADDYLPSPEAVLITGITPQEALEKGLPEAEFAA 84 (477)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHCCCCHHHHHH
T ss_conf 77857999453689998776501257789877537257741056447999899930431148899999866998799999
Q ss_pred HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 99999511796599950557899999999985078532132568871001588886555653210024444454433108
Q gi|254780661|r 81 RIHQFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKL 160 (471)
Q Consensus 81 ~i~~~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~~~~~kL 160 (471)
T Consensus 85 ~i~~~~~~~~t~~iGyNsi~FDee~~R~~fy~nl~dPY~~~~~ngNsR~Dll~~~r~~~~~~p~~i~~p~~~~G~~sfKL 164 (477)
T PRK11779 85 RIHAEFSQPGTCILGYNNIRFDDEVTRYIFYRNFYDPYAREWQNGNSRWDLLDVVRACYALRPEGINWPENEDGLPSFKL 164 (477)
T ss_pred HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEH
T ss_conf 99999668984898227754489999999998613457664248970579999999998748366116737999854449
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE
Q ss_conf 98998718876431013331899999999998642268999996238898997420015760799701010477875068
Q gi|254780661|r 161 QDLALANGIEHVNAHDAKADVYATLALVWLIREKKPKLFEYLYDYRNKNQLRKLIDIQNMTPLVHVSGMFGASRSNTALI 240 (471)
Q Consensus 161 ~~la~~n~i~~~~aH~A~~D~~~t~~l~k~i~~~~p~~~~~~l~~~~K~~v~~~l~~~~~~~~~~v~~~~~~~~~~~~~v 240 (471)
T Consensus 165 e~la~aNgi~h~~AHDAl~Dv~aTi~laklIk~k~P~l~~~~l~~r~K~~v~~~i~~~~~~p~~~vs~~fg~~~~~~~~v 244 (477)
T PRK11779 165 EHLTKANGIEHENAHDAMSDVYATIAMAKLIKQKQPKLFDYLFSLRSKRKVAALIDVPQMKPLVHVSGMFGAERGCTSWV 244 (477)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEE
T ss_conf 99998559876554106889999999999998769699999998437999999986502670389821016666622487
Q ss_pred EEEECCCCCCCEEEEEECCCCCCHHCCCCHHHHHHHHHCCHHHH-HCCCCCCEEEEECCCCCEECCHHHCCHHHHHHCCC
Q ss_conf 86302888774478710356872000799889998740651442-02477430576536787543755703134554035
Q gi|254780661|r 241 APVAWHPRYKDSVIGCNLSGDMRVFQDLDSVQLAKRLFTSHDEL-KGLVPVPIKEVHLNKCPILMPIDYCKKEHFERWGI 319 (471)
Q Consensus 241 ~~~~~~p~~~n~~i~fDL~~Dp~~~l~l~~~el~~~l~~~~~~~-~~~~~~~lr~ik~Nk~Pil~~~~~~~~~~~~~~~i 319 (471)
T Consensus 245 ~pl~~hP~n~N~~i~fDL~~DP~~ll~ls~~eL~~~l~t~~~~l~~~~~~~plk~I~iNK~Pil~p~~~l~~e~~~rl~i 324 (477)
T PRK11779 245 APLAWHPTNKNAVIVCDLAGDPSPLLELDADTLRERLYTRRADLAEGELPVPLKLVHLNKCPVLAPAKTLRPEDAERLGI 324 (477)
T ss_pred EEECCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCEECCHHHCCHHHHHHCCC
T ss_conf 63024788877658887357979986699999999971543221034677650675307888017657579435877099
Q ss_pred CHHHHHHHHHHHHHCHHHHHHHHHHHHCC-CCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
Q ss_conf 88999998999761854688887443013-34433320454102468976622168897599889862120489837999
Q gi|254780661|r 320 DHKRCLENLTLLRQQTNLRDRFKAIYNKP-YTSSSQDVDSQLYDGFFADVDRQIMDRILRTAPEQLSTLNLPFSDRRLPE 398 (471)
Q Consensus 320 ~~~~l~~r~~~l~~n~~~~~~~~~~~~~~-~~~~~~~~E~~IY~gF~s~~Dk~~~~~fh~a~~~~k~~i~~~f~D~Rl~~ 398 (471)
T Consensus 325 d~~~~~~ra~~ik~n~~f~~kv~~i~~~~~~~~~~~d~E~~IY~GF~s~~Dk~lm~~fh~a~~~el~~~~~~F~D~RL~e 404 (477)
T PRK11779 325 DRAACLDNLKLLRQNPELREKVVAVFAEEEEFAPSDDVDAQLYDGFFSDADRRLMKIIRETEPENLAALDLTFDDPRLEE 404 (477)
T ss_pred CHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
T ss_conf 99999999999986989999999998602157899997899775799989999999998199999984045787821899
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999996311810089999999999999750678889999999999965149988999999999999975278
Q gi|254780661|r 399 LFFRYRARNFPHTLSEKEKQDWLEHRKKMLTRSRIEEYKNKLQSLSGEYKGDEGKEGLINALYEYLQWVIPK 470 (471)
Q Consensus 399 l~~R~i~~n~P~~Ls~~~~~~~~~~i~~rl~~~~i~~~~~ei~~l~~~~~~d~~~~~iL~~l~~yl~~l~~~ 470 (471)
T Consensus 405 LlfRy~ARnfP~~Ls~~E~~~w~~~~~~RL~~~tl~~~~~~id~L~~~~~~d~~k~~iL~~L~~Y~e~l~~~ 476 (477)
T PRK11779 405 LLFRYRARNFPETLDDEEQQRWLEHRRQRLTDETLQQYAAKLEQLAQEYEDDEEKQALLKALYDYAEELVPT 476 (477)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999873963399999999999999985766199999999999866018999999999999999987301