HHsearch alignment for GI: 254780661 and conserved domain: pfam00929
>pfam00929 Exonuc_X-T Exonuclease. This family includes a variety of exonuclease proteins, such as ribonuclease T and the epsilon subunit of DNA polymerase III.;
Probab=99.95 E-value=2.7e-27 Score=194.16 Aligned_cols=161 Identities=27% Similarity=0.232 Sum_probs=132.3
Q ss_pred EEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 79997527889877260489999998389728040022662178887785789898579988996079997999999999
Q gi|254780661|r 5 FVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFSRRIHQ 84 (471)
Q Consensus 5 ~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~~~i~~ 84 (471)
T Consensus 1 ~v~~D~ETTGl~~~~~~Iieigav~~~~~~~~~~~~~~-~v~P~--~~i~~~~~~i~GIt~~~l~~~~-~~~~~~~~~~~ 76 (162)
T pfam00929 1 LVVIDCETTGLDPEKDRIIEIAAVSIVGGENIGPVFDT-YVKPE--RLITDEATKFHGITPEMLRNAP-SFEEVLEAFLE 76 (162)
T ss_pred CEEEEEECCCCCCCCCEEEEEEEEEEECCEEEEEEEEE-EECCC--CCCCHHHHHHCCCCHHHHHHCC-CHHHHHHHHHH
T ss_conf 98999868999899975899999999999776555678-77788--8889999987397877754153-11779999999
Q ss_pred HHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 95117965999505578999999999850785321325688710015888865556532100244444544331089899
Q gi|254780661|r 85 FFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQDLA 164 (471)
Q Consensus 85 ~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~~~~~kL~~la 164 (471)
T Consensus 77 ~l~~-~~~~v~~n-~~fD~~~l~~~~~~~~~~~~----~~~~~~~dt~~~~~~~~-------------~~~~~~~L~~l~ 137 (162)
T pfam00929 77 FLKK-LKILVGHN-ASFDVGFLLYDDLRFLKLPH----PKLNDVIDTLILDKATY-------------KGFKRRSLDALA 137 (162)
T ss_pred HHCC-CCEEECCC-CCHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHHH-------------CCCCCCCHHHHH
T ss_conf 8425-85777788-77899999999998586336----63333044899999975-------------044679989999
Q ss_pred HHHCCCC-CCCCHHHHHHHHHHHHH
Q ss_conf 8718876-43101333189999999
Q gi|254780661|r 165 LANGIEH-VNAHDAKADVYATLALV 188 (471)
Q Consensus 165 ~~n~i~~-~~aH~A~~D~~~t~~l~ 188 (471)
T Consensus 138 ~~~~i~~~~~aH~Al~Da~~t~~lf 162 (162)
T pfam00929 138 EKLGLEKIQRAHRALDDARATAELF 162 (162)
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 8859999888678299999999879