HHsearch results for GI: 254780661 and protein with PDBid: 1noy_A
>1noy_A Protein (DNA polymerase (E.C.2.7.7.7)); exonuclease, DNA-binding, complex (nucleotidyltransferase/DNA); HET: DNA; 2.20A {Enterobacteria phage T4} SCOP: c.55.3.5 PDB: 1noz_A*
Probab=97.47 E-value=0.0043 Score=37.24 Aligned_cols=101 Identities=17% Similarity=0.050 Sum_probs=58.3
Q ss_pred CEEEEECCCCCCC-----CCCCEEEEEEEEEECCCCEECCEEEEEEECC--CCCCCCCHHHHHHH--------CCCHHHH
Q ss_conf 3799975278898-----7726048999999838972804002266217--88877857898985--------7998899
Q gi|254780661|r 4 HFVIYDYETFGRD-----VALDRPAQFAGVRVDRQWEKIESTEVFFCKP--ADDYLPDPEAVFIT--------GITPQKA 68 (471)
Q Consensus 4 ~~v~~D~ETtG~~-----~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~--~~~~~p~p~a~~v~--------git~~~~ 68 (471)
....+|+||.+.. ...+.|++|+... .... ++.++.+.. ..+..+. ...... ++. ...
T Consensus 107 ~i~~~die~~~~~~~~~~~~~~~i~~I~~~~-~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~ 179 (388)
T 1noy_A 107 RVANCDIEVTGDKFPDPMKAEYEIDAITHYD-SIDD----RFYVFDLLNSMYGSVSKW-DAKLAAKLDCEGGDEVP-QEI 179 (388)
T ss_dssp CEEEEEEEECCSSCCCTTTCCSCEEEEEEEE-TTTT----EEEEEEECCCSSCCCCCC-CHHHHHSCGGGTCCCCC-HHH
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCEEEEEEE-CCCC----EEEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCC-CCC
T ss_conf 7988878743667678631002100478886-4798----599998515445666665-55555432233455655-456
Q ss_pred HHCC------CCHHHHHHHHHHHHHCCCC-EEEEEECHHHHHHHHHHHHHH
Q ss_conf 6079------9979999999999511796-599950557899999999985
Q gi|254780661|r 69 LRDG------VVEAEFSRRIHQFFSVPNT-CIIGYNNIRFDDYYSRNIFYR 112 (471)
Q Consensus 69 ~~~~------~~~~e~~~~i~~~~~~~~~-~~ig~N~~~FD~~~lr~~~~r 112 (471)
. .+ .+|.+++..+.+++....+ +++|||+.+||.+.|..-.-+
T Consensus 180 ~-d~v~~~~~~~E~~LL~~F~~~i~~~dPDiI~G~N~~~FD~pYL~~R~~~ 229 (388)
T 1noy_A 180 L-DRVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKM 229 (388)
T ss_dssp H-TTEEEEEESCHHHHHHHHHHHHHHSCCSEEECSSTTTTHHHHHHHHHHH
T ss_pred C-CCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 7-8869998399999999999999873888898706788517899999998