HHsearch results for GI: 254780661 and protein with PDBid: 1noy_A

>1noy_A Protein (DNA polymerase (E.C.2.7.7.7)); exonuclease, DNA-binding, complex (nucleotidyltransferase/DNA); HET: DNA; 2.20A {Enterobacteria phage T4} SCOP: c.55.3.5 PDB: 1noz_A*
Probab=97.47  E-value=0.0043  Score=37.24  Aligned_cols=101  Identities=17%  Similarity=0.050  Sum_probs=58.3

Q ss_pred             CEEEEECCCCCCC-----CCCCEEEEEEEEEECCCCEECCEEEEEEECC--CCCCCCCHHHHHHH--------CCCHHHH
Q ss_conf             3799975278898-----7726048999999838972804002266217--88877857898985--------7998899
Q gi|254780661|r    4 HFVIYDYETFGRD-----VALDRPAQFAGVRVDRQWEKIESTEVFFCKP--ADDYLPDPEAVFIT--------GITPQKA   68 (471)
Q Consensus         4 ~~v~~D~ETtG~~-----~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~--~~~~~p~p~a~~v~--------git~~~~   68 (471)
                      ....+|+||.+..     ...+.|++|+... ....    ++.++.+..  ..+..+. ......        ++. ...
T Consensus       107 ~i~~~die~~~~~~~~~~~~~~~i~~I~~~~-~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~  179 (388)
T 1noy_A          107 RVANCDIEVTGDKFPDPMKAEYEIDAITHYD-SIDD----RFYVFDLLNSMYGSVSKW-DAKLAAKLDCEGGDEVP-QEI  179 (388)
T ss_dssp             CEEEEEEEECCSSCCCTTTCCSCEEEEEEEE-TTTT----EEEEEEECCCSSCCCCCC-CHHHHHSCGGGTCCCCC-HHH
T ss_pred             EEEEEEEEECCCCCCCCCCCCCCCEEEEEEE-CCCC----EEEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCC-CCC
T ss_conf             7988878743667678631002100478886-4798----599998515445666665-55555432233455655-456


Q ss_pred             HHCC------CCHHHHHHHHHHHHHCCCC-EEEEEECHHHHHHHHHHHHHH
Q ss_conf             6079------9979999999999511796-599950557899999999985
Q gi|254780661|r   69 LRDG------VVEAEFSRRIHQFFSVPNT-CIIGYNNIRFDDYYSRNIFYR  112 (471)
Q Consensus        69 ~~~~------~~~~e~~~~i~~~~~~~~~-~~ig~N~~~FD~~~lr~~~~r  112 (471)
                      . .+      .+|.+++..+.+++....+ +++|||+.+||.+.|..-.-+
T Consensus       180 ~-d~v~~~~~~~E~~LL~~F~~~i~~~dPDiI~G~N~~~FD~pYL~~R~~~  229 (388)
T 1noy_A          180 L-DRVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKM  229 (388)
T ss_dssp             H-TTEEEEEESCHHHHHHHHHHHHHHSCCSEEECSSTTTTHHHHHHHHHHH
T ss_pred             C-CCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf             7-8869998399999999999999873888898706788517899999998