HHsearch results for GI: 254780661 and protein with PDBid: 1wlj_A

>1wlj_A Interferon stimulated gene 20KDA; exoribonuclease, hydrolase; HET: U5P; 1.90A {Homo sapiens} SCOP: c.55.3.5
Probab=99.89  E-value=4e-23  Score=166.01  Aligned_cols=159  Identities=16%  Similarity=0.121  Sum_probs=118.5

Q ss_pred             CCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHH
Q ss_conf             88379997527889877260489999998389728040022662178887785789898579988996079997999999
Q gi|254780661|r    2 TNHFVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFSRR   81 (471)
Q Consensus         2 ~~~~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~~~   81 (471)
                      ++.||++|+||||++|..+++|+++||+ |.+|+++  ++. +|+|..  .+.|.+..+||||++++.++ .++.++++.
T Consensus         4 ~~~~V~iD~ETtGl~~~~~~~i~~~aiv-~~~g~~v--~~~-~v~p~~--~i~~~~~~i~GIt~e~l~~~-~~~~~v~~~   76 (189)
T 1wlj_A            4 SREVVAMDCEMVGLGPHRESGLARCSLV-NVHGAVL--YDK-FIRPEG--EITDYRTRVSGVTPQHMVGA-TPFAVARLE   76 (189)
T ss_dssp             --CEEEEEEEEEEETTTTEEEEEEEEEE-CTTCCEE--EEE-EEECSS--CEEECCHHHHCCCHHHHTTC-EEHHHHHHH
T ss_pred             CCCEEEEEEECCCCCCCCCCEEEEEEEE-EECCCEE--EEE-EECCCC--CCCHHHCCCCCCCHHHHHCC-CCHHHHHHH
T ss_conf             9989999768088899998679999999-8379599--999-866999--89830024889997896227-847888999


Q ss_pred             HHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf             99995117965999505578999999999850785321325688710015888865556532100244444544331089
Q gi|254780661|r   82 IHQFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQ  161 (471)
Q Consensus        82 i~~~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~~~~~kL~  161 (471)
                      +.+++.  +.++|||| +.||..||+..+.+....         ....|.+...+..   .          ...+.++|.
T Consensus        77 ~~~~~~--~~~lV~hn-~~fD~~~L~~~~~~~~~~---------~~~~~~~~~~~~~---~----------~~~~~~~L~  131 (189)
T 1wlj_A           77 ILQLLK--GKLVVGHD-LKHDFQALKEDMSGYTIY---------DTSTDRLLWREAK---L----------DHCRRVSLR  131 (189)
T ss_dssp             HHHHHT--TSEEEESS-HHHHHHHTTCCCTTCEEE---------EGGGCHHHHHHHT---C---------------CCHH
T ss_pred             HHHHHC--CCEEEEEC-HHHHHHHHHHHCHHCCCC---------CCCHHHHHHHHHH---H----------CCCCCCCHH
T ss_conf             987631--34589735-687899999867032665---------8412169999987---3----------667788999


Q ss_pred             HHHHHH-CCC---CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             899871-887---6431013331899999999998
Q gi|254780661|r  162 DLALAN-GIE---HVNAHDAKADVYATLALVWLIR  192 (471)
Q Consensus       162 ~la~~n-~i~---~~~aH~A~~D~~~t~~l~k~i~  192 (471)
                      .||... |+.   ..++|+|++||.+|++|++++.
T Consensus       132 ~L~~~~l~~~i~~~~~~H~Al~DA~at~~l~~~~~  166 (189)
T 1wlj_A          132 VLSERLLHKSIQNSLLGHSSVEDARATMELYQISQ  166 (189)
T ss_dssp             HHHHHHTCCCCSCCTTCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             99999809877899988881999999999999999