HHsearch results for GI: 254780661 and protein with PDBid: 1wlj_A
>1wlj_A Interferon stimulated gene 20KDA; exoribonuclease, hydrolase; HET: U5P; 1.90A {Homo sapiens} SCOP: c.55.3.5
Probab=99.89 E-value=4e-23 Score=166.01 Aligned_cols=159 Identities=16% Similarity=0.121 Sum_probs=118.5
Q ss_pred CCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHH
Q ss_conf 88379997527889877260489999998389728040022662178887785789898579988996079997999999
Q gi|254780661|r 2 TNHFVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFSRR 81 (471)
Q Consensus 2 ~~~~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~~~ 81 (471)
++.||++|+||||++|..+++|+++||+ |.+|+++ ++. +|+|.. .+.|.+..+||||++++.++ .++.++++.
T Consensus 4 ~~~~V~iD~ETtGl~~~~~~~i~~~aiv-~~~g~~v--~~~-~v~p~~--~i~~~~~~i~GIt~e~l~~~-~~~~~v~~~ 76 (189)
T 1wlj_A 4 SREVVAMDCEMVGLGPHRESGLARCSLV-NVHGAVL--YDK-FIRPEG--EITDYRTRVSGVTPQHMVGA-TPFAVARLE 76 (189)
T ss_dssp --CEEEEEEEEEEETTTTEEEEEEEEEE-CTTCCEE--EEE-EEECSS--CEEECCHHHHCCCHHHHTTC-EEHHHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCCEEEEEEEE-EECCCEE--EEE-EECCCC--CCCHHHCCCCCCCHHHHHCC-CCHHHHHHH
T ss_conf 9989999768088899998679999999-8379599--999-866999--89830024889997896227-847888999
Q ss_pred HHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 99995117965999505578999999999850785321325688710015888865556532100244444544331089
Q gi|254780661|r 82 IHQFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQ 161 (471)
Q Consensus 82 i~~~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~~~~~kL~ 161 (471)
+.+++. +.++|||| +.||..||+..+.+.... ....|.+...+.. . ...+.++|.
T Consensus 77 ~~~~~~--~~~lV~hn-~~fD~~~L~~~~~~~~~~---------~~~~~~~~~~~~~---~----------~~~~~~~L~ 131 (189)
T 1wlj_A 77 ILQLLK--GKLVVGHD-LKHDFQALKEDMSGYTIY---------DTSTDRLLWREAK---L----------DHCRRVSLR 131 (189)
T ss_dssp HHHHHT--TSEEEESS-HHHHHHHTTCCCTTCEEE---------EGGGCHHHHHHHT---C---------------CCHH
T ss_pred HHHHHC--CCEEEEEC-HHHHHHHHHHHCHHCCCC---------CCCHHHHHHHHHH---H----------CCCCCCCHH
T ss_conf 987631--34589735-687899999867032665---------8412169999987---3----------667788999
Q ss_pred HHHHHH-CCC---CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 899871-887---6431013331899999999998
Q gi|254780661|r 162 DLALAN-GIE---HVNAHDAKADVYATLALVWLIR 192 (471)
Q Consensus 162 ~la~~n-~i~---~~~aH~A~~D~~~t~~l~k~i~ 192 (471)
.||... |+. ..++|+|++||.+|++|++++.
T Consensus 132 ~L~~~~l~~~i~~~~~~H~Al~DA~at~~l~~~~~ 166 (189)
T 1wlj_A 132 VLSERLLHKSIQNSLLGHSSVEDARATMELYQISQ 166 (189)
T ss_dssp HHHHHHTCCCCSCCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999809877899988881999999999999999