HHsearch results for GI: 254780661 and protein with PDBid: 1y97_A

Probab=99.97  E-value=1e-29  Score=208.38  Aligned_cols=179  Identities=19%  Similarity=0.163  Sum_probs=138.5

Q ss_pred             CCEEEEECCCCCCCCCCCEEEEEEEEEECCCC---------------EECCEEEEEEECCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             83799975278898772604899999983897---------------280400226621788877857898985799889
Q gi|254780661|r    3 NHFVIYDYETFGRDVALDRPAQFAGVRVDRQW---------------EKIESTEVFFCKPADDYLPDPEAVFITGITPQK   67 (471)
Q Consensus         3 ~~~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~---------------~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~   67 (471)
                      ++|||+|+||||+++..++|||+|+|.+|.+.               .++++++. +++|  ...++|++..+||||+++
T Consensus        10 ~~~vvlD~ETTGl~~~~~~Iiei~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~v~P--~~~i~~~~~~i~git~~~   86 (238)
T 1y97_A           10 ETFVFLDLEATGLPSVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL-CMCP--ERPFTAKASEITGLSSEG   86 (238)
T ss_dssp             SEEEEEEEEESSCGGGCCCEEEEEEEEEEHHHHTSCBC---CCCBCCSSCEEEEE-ECCC--SSCCCHHHHHHHCCCHHH
T ss_pred             CEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEECCEEE-EECC--CCCCCHHHHHHCCCCHHH
T ss_conf             9799999881898999986699999999899522231000024566621021357-8888--998998899860899999


Q ss_pred             HHHCCCC-HHHHHH-HHHHHHHC--CCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             9607999-799999-99999511--7965999505578999999999850785321325688710015888865556532
Q gi|254780661|r   68 ALRDGVV-EAEFSR-RIHQFFSV--PNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSP  143 (471)
Q Consensus        68 ~~~~~~~-~~e~~~-~i~~~~~~--~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p  143 (471)
                      +.+++.+ ..+.+. .+..++..  .+.++||||+.+||..||++.|.|+++.+.     .++..+|++.+++......+
T Consensus        87 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~hn~~~FD~~~L~~~~~r~~~~~~-----~~~~~iDtl~~~~~l~~~~~  161 (238)
T 1y97_A           87 LARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDYDFPLLCAELRRLGARLP-----RDTVCLDTLPALRGLDRAHS  161 (238)
T ss_dssp             HHHTTCCCSCHHHHHHHHHHHTTSCSSEEEEETTTTTTHHHHHHHHHHHHTCCCC-----TTCEEEEHHHHHHHHHHHC-
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC-----CCCEEEEHHHHHHHHHHCCC
T ss_conf             9853153058999999999887416882699965187789999999998089888-----89878778999999735075


Q ss_pred             HHCCCCCCCCCCCCCCHHHHHHH-HCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             10024444454433108989987-188764310133318999999999986
Q gi|254780661|r  144 DGIQWPSRDDGATSFKLQDLALA-NGIEHVNAHDAKADVYATLALVWLIRE  193 (471)
Q Consensus       144 ~~~~~~~~~~~~~~~kL~~la~~-n~i~~~~aH~A~~D~~~t~~l~k~i~~  193 (471)
                      .    .....+.+++||+.|++. +|+..++||+|++||.+|++|++.+..
T Consensus       162 ~----~~~~~~~~~~~L~~l~~~~~~~~~~~aH~Al~Da~~t~~i~~~l~~  208 (238)
T 1y97_A          162 H----GTRARGRQGYSLGSLFHRYFRAEPSAAHSAEGDVHTLLLIFLHRAA  208 (238)
T ss_dssp             -------------CCSHHHHHHHHHSSCCC---CHHHHHHHHHHHHHHTHH
T ss_pred             C----CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             4----4456666885899999996499989788989999999999999999