HHsearch results for GI: 254780661 and protein with PDBid: 2gbz_A
>2gbz_A Oligoribonuclease; ORN, deddh, structural genomics, X-RAY diffraction, hydrolase; 2.30A {Xanthomonas campestris PV}
Probab=99.91 E-value=2.5e-23 Score=167.33 Aligned_cols=170 Identities=16% Similarity=0.100 Sum_probs=126.2
Q ss_pred CCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCCCC-----CCHHHHHHHCCCHHHHHHCCCCHH
Q ss_conf 883799975278898772604899999983897280400226621788877-----857898985799889960799979
Q gi|254780661|r 2 TNHFVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYL-----PDPEAVFITGITPQKALRDGVVEA 76 (471)
Q Consensus 2 ~~~~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~~~-----p~p~a~~v~git~~~~~~~~~~~~ 76 (471)
-+++||+|+||||++|..|+|||||||++|.+++++++.....+++.+... ........++........ .....
T Consensus 8 ~~~lV~lD~ETTGLdp~~d~IIEIaaV~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 86 (194)
T 2gbz_A 8 NDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHRRSGLWQRVLDS-QVTHA 86 (194)
T ss_dssp CCEEEEEEEEESCSCTTTCCEEEEEEEEEETTCCEEEECCCEECCCCHHHHHTSCSHHHHHHHHHTHHHHHHHC-CCCHH
T ss_pred CCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEECCCHHHCCCCCCCCCEEEECCCHHHHHHCC-CCCHH
T ss_conf 89989998778999999983799999998289605012543201475110243334541133123113430135-65799
Q ss_pred HHHHHHHHHHHCC---CCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999995117---9659995055789999999998507853213256887100158888655565321002444445
Q gi|254780661|r 77 EFSRRIHQFFSVP---NTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDD 153 (471)
Q Consensus 77 e~~~~i~~~~~~~---~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~ 153 (471)
+....+......+ +..++++|+..||..|++..+.+.... ..+..+|++.+.+....++|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~~~l~~~~~~~~~~-------~~~~~iD~~~~~~~~~~~~~~~-------- 151 (194)
T 2gbz_A 87 QAEAQTVAFLGEWIRAGASPMCGNSICQDRRFLHRQMSRLERY-------FHYRNLDVSTIKELARRWAPAV-------- 151 (194)
T ss_dssp HHHHHHHHHHTTTCCTTSSCEEESSHHHHHHHHHHHCHHHHHH-------SCSCEEEHHHHHHHHHHHCGGG--------
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-------CCCCCCHHHHHHHHHHHHCHHH--------
T ss_conf 9999999876640468974111342133099999999986110-------4897310899999988759143--------
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4433108989987188764310133318999999999986422689
Q gi|254780661|r 154 GATSFKLQDLALANGIEHVNAHDAKADVYATLALVWLIREKKPKLF 199 (471)
Q Consensus 154 ~~~~~kL~~la~~n~i~~~~aH~A~~D~~~t~~l~k~i~~~~p~~~ 199 (471)
..|+...+||||++||.+|++++|.+++..+.+-
T Consensus 152 ------------~~~~~~~~aHrAl~Dv~aTi~llk~yr~~~~~~~ 185 (194)
T 2gbz_A 152 ------------ASGFAKSSAHTALSDVRDSIDELRHYRQFMGTLG 185 (194)
T ss_dssp ------------GTTCCCCSCCSHHHHHHHHHHHHHHHHTTSHHHH
T ss_pred ------------HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf ------------4079998984878999999999999999658779