HHsearch results for GI: 254780661 and protein with PDBid: 2hbj_A
>2hbj_A Exosome complex exonuclease RRP6; RNA metabolism, RNA surveillance, RNA processing, hydrolase, gene regulation; 2.10A {Saccharomyces cerevisiae} SCOP: a.60.8.4 c.55.3.5 PDB: 2hbk_A 2hbl_A* 2hbm_A*
Probab=96.13 E-value=0.062 Score=29.79 Aligned_cols=133 Identities=16% Similarity=0.133 Sum_probs=79.3
Q ss_pred CCCEEEEECCCCCCCCCCCEE--EEEEEEEECCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHH
Q ss_conf 883799975278898772604--899999983897280400226621788877857898985799889960799979999
Q gi|254780661|r 2 TNHFVIYDYETFGRDVALDRP--AQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFS 79 (471)
Q Consensus 2 ~~~~v~~D~ETtG~~~~~~~i--iq~~~i~~d~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~ 79 (471)
....+.+|+||++.+..++++ ||++ + .+. .+.+ ++-++ ... +
T Consensus 105 ~~~~iavDtE~~~~~t~~~~l~LiQi~---t-~~~-------~~li--------D~l~l-----------~~~------l 148 (410)
T 2hbj_A 105 NTKEIAVDLEHHDYRSYYGIVCLMQIS---T-RER-------DYLV--------DTLKL-----------REN------L 148 (410)
T ss_dssp TCSEEEEEEEEECSSSSSCEEEEEEEE---C-SSC-------EEEE--------ETTTT-----------TTT------G
T ss_pred CCCEEEEEEEECCCCCCCCCEEEEEEE---E-CCC-------CEEE--------EECCC-----------CCC------H
T ss_conf 599199970477885167706899998---1-897-------7898--------50145-----------335------8
Q ss_pred HHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999951179659995055789999999998507853213256887100158888655565321002444445443310
Q gi|254780661|r 80 RRIHQFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFK 159 (471)
Q Consensus 80 ~~i~~~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~~~~~k 159 (471)
..+.+.|.++..+-|+|| ..+|..+|++.|-. .....+|+.-.++.+ |.+.++
T Consensus 149 ~~L~~ll~d~~I~KV~H~-~~~Dl~~L~~~~g~-----------~~~~~fDT~ia~~~l---------------~~~~~s 201 (410)
T 2hbj_A 149 HILNEVFTNPSIVKVFHG-AFMDIIWLQRDLGL-----------YVVGLFDTYHASKAI---------------GLPRHS 201 (410)
T ss_dssp GGGHHHHTCTTSEEEESS-CHHHHHHHHHHHCC-----------CCSSEEEHHHHHHHH---------------TCSCCS
T ss_pred HHHHHHHCCCCCEEEEEC-HHHHHHHHHHHCCC-----------CCCCCCCHHHHHHHC---------------CCCCCC
T ss_conf 999999749994299955-78779999984575-----------678720269999980---------------988756
Q ss_pred HHHHHHH-HCCCCCC----------------CCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8989987-1887643----------------101333189999999999864226
Q gi|254780661|r 160 LQDLALA-NGIEHVN----------------AHDAKADVYATLALVWLIREKKPK 197 (471)
Q Consensus 160 L~~la~~-n~i~~~~----------------aH~A~~D~~~t~~l~k~i~~~~p~ 197 (471)
|..|+.. .|+..+. -+=|..||..++.|...+..+..+
T Consensus 202 L~~L~~~~l~~~l~K~~q~sDW~~RPL~~~qi~YAa~Dv~~Ll~ly~~L~~~L~~ 256 (410)
T 2hbj_A 202 LAYLLENFANFKTSKKYQLADWRIRPLSKPMTAAARADTHFLLNIYDQLRNKLIE 256 (410)
T ss_dssp HHHHHHHHSCCCCCCTTTTSCTTCSSCCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998736665641334200455587999999985378899999999999997