HHsearch results for GI: 254780661 and protein with PDBid: 2xri_A
>2xri_A ERI1 exoribonuclease 3; hydrolase, metal binding; 2.15A {Homo sapiens}
Probab=99.95 E-value=1.2e-25 Score=182.16 Aligned_cols=173 Identities=12% Similarity=0.083 Sum_probs=136.2
Q ss_pred CCEEEEECCCCCCCCCCC--EEEEEEEEEEC-CCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHH
Q ss_conf 837999752788987726--04899999983-897280400226621788877857898985799889960799979999
Q gi|254780661|r 3 NHFVIYDYETFGRDVALD--RPAQFAGVRVD-RQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFS 79 (471)
Q Consensus 3 ~~~v~~D~ETtG~~~~~~--~iiq~~~i~~d-~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~ 79 (471)
..||++|+||||.++..+ +|||+|||++| .+++++++|+. +|+|.....++|++..+||||++++.+++ +..+++
T Consensus 31 ~~~vv~D~EtTg~~~~~~~~eIIEiGaV~~d~~~~~i~~~f~~-~vkP~~~~~i~~~~~~itgIt~e~l~~a~-~~~ev~ 108 (224)
T 2xri_A 31 HYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHM-YVQPVVHPQLTPFCTELTGIIQAMVDGQP-SLQQVL 108 (224)
T ss_dssp SEEEEECCEECCCC-CCSSCCEEEEEEEEEETTTCCEEEEEEE-ECCCSSSCSCCHHHHHHHCCCHHHHTTCC-CHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEE-EECCCCCCCCCHHHHEECCCCHHHCCCCC-CHHHHH
T ss_conf 9899999836899998897818999999998999869889999-99979888789678153011356511346-377789
Q ss_pred HHHHHHHHCC-----CCEEEEEECHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999995117-----965999505578999-9999998507853213256887100158888655565321002444445
Q gi|254780661|r 80 RRIHQFFSVP-----NTCIIGYNNIRFDDY-YSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDD 153 (471)
Q Consensus 80 ~~i~~~~~~~-----~~~~ig~N~~~FD~~-~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~ 153 (471)
+++.+++... +..++.+++.+||.. +++..+.+.+++.... .+...|+..+.+.. +|
T Consensus 109 ~~f~~~l~~~~lv~~~~~~~~~~~~~fD~~~~l~~~~~~~~~~~p~~----~~~~iD~~~~~~~~---~~---------- 171 (224)
T 2xri_A 109 ERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADY----FKQWINLKKAYSFA---MG---------- 171 (224)
T ss_dssp HHHHHHHHHTTTTSTTSCEEEEESSSHHHHTHHHHHHHHHTCCCCGG----GSCEEEHHHHHHHH---HT----------
T ss_pred HHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCCC----CCEEEHHHHHHHHH---HC----------
T ss_conf 99999965885994055279996516665789999999749998743----43123499999997---18----------
Q ss_pred CCCCCCHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 4433108989987188764-3101333189999999999864
Q gi|254780661|r 154 GATSFKLQDLALANGIEHV-NAHDAKADVYATLALVWLIREK 194 (471)
Q Consensus 154 ~~~~~kL~~la~~n~i~~~-~aH~A~~D~~~t~~l~k~i~~~ 194 (471)
..++++|+.+++++||+.. ++|+|+.||.+|++|++.+.++
T Consensus 172 ~~~~~~L~~l~~~~gi~~~~~~H~Al~DA~~ta~l~~~Ll~~ 213 (224)
T 2xri_A 172 CWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYR 213 (224)
T ss_dssp SCCTTTHHHHHHHTTCCCCSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 777876999999869999998738599999999999999977