RPSBLAST alignment for GI: 254780661 and conserved domain: pfam08411
>gnl|CDD|149465 pfam08411, Exonuc_X-T_C, Exonuclease C-terminal. This bacterial domain is found at the C-terminus of Exodeoxyribonuclease I/Exonuclease I (pfam00929), which is a single-strand specific DNA nuclease affecting recombination and expression pathways. The exonuclease I protein in E. coli is associated with DNA deoxyribophosphodiesterase (dRPase). Length = 268
Score = 328 bits (844), Expect = 1e-90
Identities = 132/268 (49%), Positives = 183/268 (68%), Gaps = 10/268 (3%)
Query: 206 RNKNQLRKLIDIQNMTPLVHVSGMFGASRSNTALIAPVAWHPRYKDSVIGCNLSGDMRVF 265
R+K + KLID+ M PLVHVSGMFGA R T+ + P+AWHP K++VI C+L+ D
Sbjct: 1 RSKKAVAKLIDLVAMKPLVHVSGMFGAERGCTSWVLPLAWHPTNKNAVIVCDLAQDPSPL 60
Query: 266 QDLDSVQLAKRLFTSHDEL-KGLVPVPIKEVHLNKCPILMPIDYCKKEHFERWGIDHKRC 324
DL + +L +RL+T ++L +G + VP+K VHLNKCPIL P + E ER GID ++C
Sbjct: 61 LDLSAEELRQRLYTKREDLAEGELRVPLKLVHLNKCPILAPAKTLRPEDAERLGIDREQC 120
Query: 325 LENLTLLRQQTNLRDRFKAIYN--KPYTSSSQDVDSQLYDGFFADVDRQIMDRILRTAPE 382
L+NL LLRQ LR++ K ++ + + S+ DVD QLYDGFF+D D+++M+ I T+PE
Sbjct: 121 LKNLALLRQNPELREKLKEVFEEEREFPPST-DVDQQLYDGFFSDADKRLMEIIRETSPE 179
Query: 383 QLSTLNLPFSDRRLPELFFRYRARNFPHTLSEKEKQDWLEHRKKMLTRSR-----IEEYK 437
QL+ L L F D+RLPEL FRYRARNFP TLSE+E+Q W E+ ++ L +E+Y+
Sbjct: 180 QLAELELNFDDKRLPELLFRYRARNFPETLSEEEQQRWQEYCQQRLLDPAGGALTLEDYE 239
Query: 438 NKLQSLSGEYKGDEGKEGLINALYEYLQ 465
KL+ L+ EY DE K+ L+ ALY+Y Q
Sbjct: 240 QKLEQLAAEYSDDE-KQALLQALYDYAQ 266