RPSBLAST alignment for GI: 254780661 and conserved domain: TIGR01407

>gnl|CDD|162341 TIGR01407, dinG_rel, DnaQ family exonuclease/DinG family helicase, putative. This model represents a family of proteins in Gram-positive bacteria. The N-terminal region of about 200 amino acids resembles the epsilon subunit of E. coli DNA polymerase III and the homologous region of the Gram-positive type DNA polymerase III alpha subunit. The epsilon subunit contains an exonuclease domain. The remainder of this protein family resembles a predicted ATP-dependent helicase, the DNA damage-inducible protein DinG of E. coli. Length = 850
 Score = 53.7 bits (129), Expect = 9e-08
 Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 33/197 (16%)

Query: 5   FVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLP-DPEAVFITGI 63
           + + D ET G  ++ D+  Q  G+ V    E +++    F    +   P  P    +TGI
Sbjct: 2   YAVVDLETTGTQLSFDKIIQI-GIVVVEDGEIVDT----FHTDVNPNEPIPPFIQELTGI 56

Query: 64  TPQKALRDGVVEA-EFSRRIHQFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYD-SYRWS 121
           +        + +A  FS+   + + +    I   +N+ FD     N   +   D  Y   
Sbjct: 57  SDNM-----LQQAPYFSQVAQEIYDLLEDGIFVAHNVHFD----LNFLAKALKDCGYEP- 106

Query: 122 WDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQDLALANGIEHVNAHDAKADV 181
                 R D +++ +  +         P+ +    S++L +L+ A G+ H N H A +D 
Sbjct: 107 --LPKPRIDTVELAQIFF---------PTEE----SYQLSELSEALGLTHENPHRADSDA 151

Query: 182 YATLALVWLIREKKPKL 198
            AT  L+ L+ EK  KL
Sbjct: 152 QATAELLLLLFEKMEKL 168