RPSBLAST alignment of GI: 254780661 and protein with PDBid: 2ioc

>2ioc_B Three prime repair exonuclease 1; proline helix, nucleotide complex, DNAQ family, hydrolase; HET: D5M; 2.10A {Mus musculus} SCOP: c.55.3.5 PDB: 3b6o_A* 2o4g_A* 3b6p_A* 2o4i_A 2oa8_A Length = 242

 Score = 85.0 bits (209), Expect = 3e-17
 Identities = 36/244 (14%), Positives = 71/244 (29%), Gaps = 37/244 (15%)

Query: 5   FVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLP----------- 53
            +  D E  G   +     +   + V R+  +  S       P                 
Sbjct: 14  LIFLDLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAP 73

Query: 54  ----DPEAVFITGITPQKALRDGVVEAEFS----RRIHQFFSVPNTCIIGYNNIRFDDYY 105
                P A  ITG++  +    G    + +     R          C++ +N  R+D   
Sbjct: 74  GKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPL 133

Query: 106 SRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQDLA- 164
            +    R    S            D +  ++A+          PS +    S+ L  +  
Sbjct: 134 LQTELARLSTPSPLDGTFC----VDSIAALKALEQA-----SSPSGNGSRKSYSLGSIYT 184

Query: 165 LANGIEHVNAHDAKADVYATLALVWLIREKKPKLFEYLYDYRNKNQLRKLIDIQNMTPLV 224
                   ++H A+ DV   L++    + K   L +++         R    ++ M    
Sbjct: 185 RLYWQAPTDSHTAEGDVLTLLSIC---QWKPQALLQWV-----DEHARPFSTVKPMYGTP 236

Query: 225 HVSG 228
             +G
Sbjct: 237 ATTG 240