HHsearch alignment for GI: 254780662 and conserved domain: PRK04374
>PRK04374 PII uridylyl-transferase; Provisional.
Probab=95.81 E-value=0.19 Score=30.11 Aligned_cols=95 Identities=6% Similarity=-0.103 Sum_probs=60.7
Q ss_pred HHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCH----HHH
Q ss_conf 8899988631997897449989999999999999840589887178724765558998865799994787743----899
Q gi|254780662|r 27 SFSASAMFGEASIDDLEKYTPQMLALTSVVSYDIFAGWDHSSACCIDIREVEGINPSGISISIITVIVDNIPF----LYQ 102 (1576)
Q Consensus 27 ~~fa~~~f~~~~~eDl~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~v~~p~~~~~gw~s~~tvi~iv~dD~Pf----LvD 102 (1576)
T Consensus 32 ~~l~~~f~~g~~i~~l~~~r~~~~D~ll~~lW~~~~~~~~~iaLvAVGGYGR~EL~P~SDIDlliL~~~~~~~~~~~~i~ 111 (869)
T PRK04374 32 MRLCKRFDQGEPIERLLALRARAVDQLMRNAWTRCIPADSGLSLHAVGGYGRGELFPRSDVDLLVLGDTAAQQRHEQALA 111 (869)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 99999986799999999999999999999999970788898589974886513578877044888538999857899999
Q ss_pred HHHHHHHHCCCCEEEEECC
Q ss_conf 9999999779912799846
Q gi|254780662|r 103 SIIGEIVARCRNLTMAVHP 121 (1576)
Q Consensus 103 Sv~~~l~~~~~~i~~~~HP 121 (1576)
T Consensus 112 ~f~~~LWD~gl~vGhSVRT 130 (869)
T PRK04374 112 RLFALLWDVGLPISHAVRS 130 (869)
T ss_pred HHHHHHHHCCCCCCCCCCC
T ss_conf 9999998189987867899