HHsearch results for GI: 254780662 and protein with PDBid: 1gtm_A
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus dsm 3638} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.89 E-value=4.6e-20 Score=193.29 Aligned_cols=307 Identities=24% Similarity=0.242 Sum_probs=211.3
Q ss_pred EEEEEEEC---CCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 57998405---423304042008857888889998998453287--4288875327871689988998999999999999
Q gi|254780662|r 774 VEGVHLRC---GKIARGGLRWSDRAADYRTEVLGLVRAQKVKNA--VIVPVGAKGGFYPKRLPSEGRRDEIIKIGREAYK 848 (1576)
Q Consensus 774 ~eGvHlR~---g~vARGGlRwSdR~edfrtEvlgL~kaQ~vKN~--vIvp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y~ 848 (1576)
|.|++..+ .-.|.||+||+. +.=..||+.|++++.+||+ .+|-+|+|||+.+. |...+.. |-..-.+
T Consensus 53 ~~g~rv~Hn~~lGPakGGiR~~~--~v~l~ev~~LA~~MT~K~Al~~lp~GGgKggI~~d--p~~~~~~----e~e~~~r 124 (419)
T 1gtm_A 53 FTGFRVQHNWARGPTKGGIRWHP--EETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVD--PKKLSDR----EKERLAR 124 (419)
T ss_dssp EEEEEEEEECTTSSEECCEEECT--TCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEEECC--GGGSCHH----HHHHHHH
T ss_pred EEEEEEEECCCCCCCCCCEECCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC--CCCCCHH----HHHHHHH
T ss_conf 97899996687788877144468--77899999999998999997089988856487569--7668858----8999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH-HHHHHHH----HHHHCCCCCCCHHCCCCCC--CCC
Q ss_conf 99989887762568884028831030538986799817788832-6899999----9988089985011056999--988
Q gi|254780662|r 849 TYVRALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT-FSDTANI----LAQEAKFWLDDAFASGGSM--GYD 921 (1576)
Q Consensus 849 ~fi~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~-fsD~An~----ia~~~gfwlgdAFaSGgs~--Gyd 921 (1576)
.|++.+.++. |.+. -+-|+|-||.. .+.|... ++.....|+ ++.+|++. |=-
T Consensus 125 ~~~~~l~~~~------------------G~~~-di~apDvgt~~~~m~~~~d~~~~i~~~~~~~~--g~~tgkp~~~GG~ 183 (419)
T 1gtm_A 125 GYIRAIYDVI------------------SPYE-DIPAPDVYTNPQIMAWMMDEYETISRRKTPAF--GIITGKPLSIGGS 183 (419)
T ss_dssp HHHHHHGGGC------------------BTTT-EECCBCTTCCHHHHHHHHHHHHHHHTTSSCGG--GGCSSCCGGGTCC
T ss_pred HHHHHHHHCC------------------CCCC-CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCCCCC
T ss_conf 9999764247------------------8645-66777543567661167656899828557776--6457997536888
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHH-HCC--CCCEEEEEECCCEEEECCCCCCCCCH
Q ss_conf 431011467899999999998089965486459960588633244311-127--66208999739436867778813798
Q gi|254780662|r 922 HKKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGM-LLS--RKIQLVAAFDHSDIFIDPDPNSETTF 998 (1576)
Q Consensus 922 HK~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgm-Lls--~~i~lvaafdh~hif~DP~PD~~~s~ 998 (1576)
+.....|++|+..+++..++.+|.+.- +.-||+.-|- |.|.++-. +|. -..++|+..|+.+..+||+ +++.
T Consensus 184 ~~~~~aTg~Gv~~~~~~a~~~~g~~~l-~g~~VaIQG~--GnVG~~~a~~L~~~~g~~vVavsD~~G~i~n~~---Gld~ 257 (419)
T 1gtm_A 184 LGRIEATARGASYTIREAAKVLGWDTL-KGKTIAIQGY--GNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPD---GLNA 257 (419)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHTTCSCS-TTCEEEEECC--SHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEE---EECH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCC-CCCEEEEECC--CHHHHHHHHHHHHHCCCCEEEECCCCCEEECCC---CCCH
T ss_conf 886587768999999999998199865-6888996088--679999999998733867999537873698787---6677
Q ss_pred HHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEEC
Q ss_conf 99999996689870038978717897089821444217989998709885542888999863036530443387421112
Q gi|254780662|r 999 DERKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGTYIR 1078 (1576)
Q Consensus 999 ~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGTYvk 1078 (1576)
++..++.+.. .+..+|. + ...+++++ ++..++|+|.+|.+|--|
T Consensus 258 ~~L~~~~~~~-g~~~~~~------~------------------------~~~v~~~~----i~~~~~DIliPcAl~~~I- 301 (419)
T 1gtm_A 258 DEVLKWKNEH-GSVKDFP------G------------------------ATNITNEE----LLELEVDVLAPAAIEEVI- 301 (419)
T ss_dssp HHHHHHHHHH-SSSTTCT------T------------------------SEEECHHH----HHHSCCSEEEECSCSCCB-
T ss_pred HHHHHHHHHH-CCCCCCC------C------------------------CEEECCCC----CCCCCCCEEEEECCCCCC-
T ss_conf 9999999972-8620368------7------------------------55643321----246665566010134656-
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 68986200152100000025883046899855510307678999997398683533134437324404767999865887
Q gi|254780662|r 1079 APRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIKIALASAM 1158 (1576)
Q Consensus 1079 a~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniKIll~~~~ 1158 (1576)
..++ ...++||+|+||||..+|+.+.-.+..+|+.+.+|++.|+|||++|.+|-.- -.
T Consensus 302 --------~~~~--------a~~l~akiIvegAN~p~t~ea~~~L~~rGI~~iPD~~aNaGGVi~Sy~Ew~q------n~ 359 (419)
T 1gtm_A 302 --------TKKN--------ADNIKAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQ------NI 359 (419)
T ss_dssp --------CTTG--------GGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHH------HH
T ss_pred --------CHHH--------HHHHCCCEEEECCCCCCCHHHHHHHHHCCEEEECHHHHCCCCHHHHHHHHHH------HH
T ss_conf --------6988--------8521558799027998897899999869989987288638518887999975------23
Q ss_pred HCCCCCHHHHHHHHH
Q ss_conf 707989889988999
Q gi|254780662|r 1159 RDGRLTLENRNKLLS 1173 (1576)
Q Consensus 1159 ~~g~lt~~~Rn~lL~ 1173 (1576)
..-..+.++-++-|.
T Consensus 360 ~~~~~~~e~v~~~l~ 374 (419)
T 1gtm_A 360 TGYYWTIEEVRERLD 374 (419)
T ss_dssp HCCCCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 147889999999999