HHsearch results for GI: 254780662 and protein with PDBid: 1v9l_A
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=99.92 E-value=4.8e-23 Score=219.75 Aligned_cols=317 Identities=20% Similarity=0.199 Sum_probs=226.2
Q ss_pred CEEEEEEECCCC---CCCEEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
Q ss_conf 657998405423---304042008857888889998998453287--428887532787168998899899999999999
Q gi|254780662|r 773 EVEGVHLRCGKI---ARGGLRWSDRAADYRTEVLGLVRAQKVKNA--VIVPVGAKGGFYPKRLPSEGRRDEIIKIGREAY 847 (1576)
Q Consensus 773 ~~eGvHlR~g~v---ARGGlRwSdR~edfrtEvlgL~kaQ~vKN~--vIvp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y 847 (1576)
-|.|++..+..+ |+||+|++. +.=..||+.|+++|..||+ .||-||+|||+.+. |...+.. |..+..
T Consensus 53 ~~~g~rv~H~~~~GP~kGGiR~~~--~~~~~ev~~LA~~MT~K~al~~lp~GG~KggI~~d--p~~~~~~----e~~~~~ 124 (421)
T 1v9l_A 53 VFEGYRVQHCDVLGPYKGGVRFHP--EVTLADDVALAILMTLKNSLAGLPYGGAKGAVRVD--PKKLSQR----ELEELS 124 (421)
T ss_dssp EEEEEEEEEECSSSSEEEEEECCT--TCCHHHHHHHHHHHHHHHHHTTCSCCEEEEEECSC--GGGSCHH----HHHHHH
T ss_pred EEEEEEEEECCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC--CCCCCHH----HHHHHH
T ss_conf 998999998798788876303578--76899999999898999998389977776589679--8657878----999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH-HHHH-HHHHHHHCCCCCCCHHCCCCC--CCCCCC
Q ss_conf 999989887762568884028831030538986799817788832-6899-999998808998501105699--998843
Q gi|254780662|r 848 KTYVRALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT-FSDT-ANILAQEAKFWLDDAFASGGS--MGYDHK 923 (1576)
Q Consensus 848 ~~fi~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~-fsD~-An~ia~~~gfwlgdAFaSGgs--~GydHK 923 (1576)
+.|.+.+-++. | +.+-+-|+|-||.. .++| +...+.-+|++.+..| +|++ .|-.+.
T Consensus 125 r~~~~~~~~~~------------------G-~~~dipapDvgt~~~~m~~~~d~~~~~~g~~~~~~~-tgk~~~~gG~~~ 184 (421)
T 1v9l_A 125 RGYARAIAPLI------------------G-DVVDIPAPDVGTNAQIMAWMVDEYSKIKGYNVPGVF-TSKPPELWGNPV 184 (421)
T ss_dssp HHHHHHHGGGC------------------B-TTTEEEECCTTCCHHHHHHHHHHHHHHHTSCCGGGS-CSCCSSSSCCGG
T ss_pred HHHHHHHHHCC------------------C-CCCEECCCCCCCCHHHHHHHHHHEEEEEEEECCCCC-CCCCCCCCCCCC
T ss_conf 99999998607------------------9-984555776887999999986336689864025634-689754578887
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHH
Q ss_conf 10114678999999999980899654864599605886332443111276620899973943686777881379899999
Q gi|254780662|r 924 KMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGMLLSRKIQLVAAFDHSDIFIDPDPNSETTFDERKR 1003 (1576)
Q Consensus 924 ~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgmLls~~i~lvaafdh~hif~DP~PD~~~s~~Er~R 1003 (1576)
....|.+|+..+++.-+++++.+++...+.+-|.|...+.+. -.|.-...|+|++.|+.+..+||+ +++.++..+
T Consensus 185 r~~atG~gv~~~~~~~~~~~~~~l~g~~vaIQGfGnVG~~~A--~~L~~~GakvvavsD~~G~i~~~~---Gld~~~l~~ 259 (421)
T 1v9l_A 185 REYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTA--YWLEKMGAKVIAVSDINGVAYRKE---GLNVELIQK 259 (421)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHH--HHHHTTTCEEEEEECSSCEEECTT---CCCTHHHHH
T ss_pred CCEEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH--HHHHHCCCEEEEEECCCCCEECCC---CCCHHHHHH
T ss_conf 626998705788899997526996788799950784079999--988635868999974787422545---446999999
Q ss_pred HHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCCCC
Q ss_conf 99668987003897871789708982144421798999870988554288899986303653044338742111268986
Q gi|254780662|r 1004 LFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGTYIRAPREN 1083 (1576)
Q Consensus 1004 Lf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGTYvka~~e~ 1083 (1576)
+....+++..++-.. ..++ +....|+ .++..++|+|.+|.+|--|
T Consensus 260 ~~~~~g~~~~~~~~~---~~~~----------------------~~~~~~~----~i~~~~~DIliPcA~~~~I------ 304 (421)
T 1v9l_A 260 NKGLTGPALVELFTT---KDNA----------------------EFVKNPD----AIFKLDVDIFVPAAIENVI------ 304 (421)
T ss_dssp TTTSCHHHHHHHHHH---TSCC----------------------CCCSSTT----GGGGCCCSEEEECSCSSCB------
T ss_pred HHHCCHHHHHHHHCC---CCCC----------------------EEEECCH----HHHCCCCCEEEECCCCCEE------
T ss_conf 863330122211102---6883----------------------7960754----7512565577312420044------
Q ss_pred CCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 20015210000002588304689985551030767899999739868353313443732440476799986588770798
Q gi|254780662|r 1084 NADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIKIALASAMRDGRL 1163 (1576)
Q Consensus 1084 ~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniKIll~~~~~~g~l 1163 (1576)
.. .|...++||+|+||||..+|+.|+-.+..+|+.+.+|++.|+|||++|.+|.. .. ...-..
T Consensus 305 ---~~--------~~a~~l~akiIvegAN~p~t~eA~~~L~~rGI~viPD~laNaGGVi~Sy~Ew~-----qn-~~~~~w 367 (421)
T 1v9l_A 305 ---RG--------DNAGLVKARLVVEGANGPTTPEAERILYERGVVVVPDILANAGGVIMSYLEWV-----EN-LQWYIW 367 (421)
T ss_dssp ---CT--------TTTTTCCCSEEECCSSSCBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHHH-----HH-HTTCCC
T ss_pred ---CH--------HHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEECHHHHCCCCCEEEHHHHH-----CC-CCCCCC
T ss_conf ---28--------66741235779921799999779999997998997858813864102078776-----40-024689
Q ss_pred CHHHHHHHHHH
Q ss_conf 98899889998
Q gi|254780662|r 1164 TLENRNKLLSS 1174 (1576)
Q Consensus 1164 t~~~Rn~lL~~ 1174 (1576)
+.++=++-|..
T Consensus 368 ~~eev~~~l~~ 378 (421)
T 1v9l_A 368 DEEETRKRLEN 378 (421)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
T ss_conf 99999999999