Query gi|254780662|ref|YP_003065075.1| NAD-glutamate dehydrogenase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 1576
No_of_seqs 192 out of 453
Neff 4.7
Searched_HMMs 13730
Date Wed Jun 1 08:39:43 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780662.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b26a1 c.2.1.7 (A:179-412) Gl 99.4 6.8E-12 5E-16 118.7 15.1 192 915-1175 1-195 (234)
2 d1bgva1 c.2.1.7 (A:195-449) Gl 99.4 3.1E-12 2.2E-16 121.7 11.4 206 913-1180 4-216 (255)
3 d1gtma1 c.2.1.7 (A:181-419) Gl 99.3 2.4E-11 1.7E-15 113.9 13.9 196 915-1178 1-200 (239)
4 d1hwxa1 c.2.1.7 (A:209-501) Gl 99.3 2E-10 1.5E-14 105.6 17.6 167 924-1148 3-177 (293)
5 d1v9la1 c.2.1.7 (A:180-421) Gl 99.3 1.9E-11 1.4E-15 114.8 11.3 195 926-1179 8-205 (242)
6 d1leha1 c.2.1.7 (A:135-364) Le 98.6 5.2E-08 3.8E-12 84.2 7.1 150 924-1148 12-164 (230)
7 d1c1da1 c.2.1.7 (A:149-349) Ph 98.5 1.4E-07 1E-11 80.5 7.8 163 928-1179 5-171 (201)
8 d1v9la2 c.58.1.1 (A:4-179) Glu 97.4 0.00068 4.9E-08 47.7 9.4 117 774-918 54-174 (176)
9 d1bgva2 c.58.1.1 (A:1-194) Glu 97.3 0.001 7.4E-08 46.2 9.5 103 778-907 81-187 (194)
10 d1c1da2 c.58.1.1 (A:1-148) Phe 97.2 0.0022 1.6E-07 43.2 10.2 115 776-918 28-147 (148)
11 d1b26a2 c.58.1.1 (A:4-178) Glu 97.0 0.0012 8.7E-08 45.5 7.1 113 777-917 56-172 (175)
12 d1gtma2 c.58.1.1 (A:3-180) Glu 97.0 0.0019 1.3E-07 43.8 7.7 115 777-918 57-176 (178)
13 d1hwxa2 c.58.1.1 (A:1-208) Glu 96.6 0.0021 1.5E-07 43.3 5.9 117 776-917 80-202 (208)
14 d1leha2 c.58.1.1 (A:1-134) Leu 96.4 0.006 4.4E-07 39.3 7.0 106 764-899 13-128 (134)
15 d1zpva1 d.58.18.7 (A:1-83) UPF 81.7 1.1 7.9E-05 19.3 7.8 35 88-122 3-37 (83)
16 d1u8sa1 d.58.18.5 (A:2-87) put 71.5 1.9 0.00014 17.1 9.9 69 85-174 3-71 (86)
17 d1u8sa2 d.58.18.5 (A:88-180) p 60.4 2.9 0.00021 15.5 7.3 35 89-123 8-42 (93)
18 d2bnma1 a.35.1.3 (A:6-76) Hydr 55.4 1.4 9.9E-05 18.4 0.3 19 1108-1126 41-59 (71)
19 d1jqoa_ c.1.12.3 (A:) Phosphoe 52.9 2.7 0.00019 15.8 1.5 93 974-1085 524-620 (936)
20 d2j5pa1 a.4.5.67 (A:1261-1329) 52.0 3.8 0.00028 14.4 2.8 48 1174-1224 7-54 (69)
21 d1tlta1 c.2.1.3 (A:5-127,A:268 51.8 3.9 0.00028 14.4 4.9 93 952-1075 4-96 (164)
22 d1fiua_ c.52.1.10 (A:) Restric 47.8 4.3 0.00031 14.0 1.9 88 845-960 7-100 (286)
23 d1jhfa1 a.4.5.2 (A:2-72) LexA 47.0 4.5 0.00033 13.8 6.6 50 635-684 2-52 (71)
24 d1jqna_ c.1.12.3 (A:) Phosphoe 45.4 3.1 0.00022 15.3 0.9 33 353-385 49-86 (880)
25 d2qkwa1 a.8.8.1 (A:29-129) Avi 41.4 5.3 0.00039 13.2 4.2 18 173-190 79-96 (101)
26 d2ve8a1 a.4.5.67 (A:745-811) D 40.4 5.5 0.0004 13.0 3.6 48 1174-1224 4-51 (67)
27 d1vqza2 d.104.1.3 (A:1-241) Lp 37.0 6.1 0.00044 12.6 6.4 114 871-993 30-156 (241)
28 d3cdda2 b.106.1.1 (A:2-180) Ba 36.9 6.1 0.00045 12.6 3.5 53 891-947 114-167 (179)
29 d1ygya3 d.58.18.1 (A:452-529) 35.2 6.5 0.00047 12.4 10.0 61 88-166 4-65 (78)
30 d1h6da1 c.2.1.3 (A:51-212,A:37 33.8 3.3 0.00024 15.0 -0.5 48 951-1008 35-82 (221)
31 d2i53a2 a.74.1.1 (A:158-267) C 31.9 7.2 0.00052 12.0 2.7 20 720-739 24-43 (110)
32 d1ozba_ d.33.1.1 (A:) Bacteria 31.2 7.4 0.00054 11.9 2.3 42 309-350 68-120 (144)
33 d1i7na1 c.30.1.5 (A:113-214) S 31.1 6.6 0.00048 12.3 0.7 16 793-808 82-97 (102)
34 d1wrua2 b.106.1.1 (A:3-176) Ba 30.9 7.3 0.00053 12.0 0.9 57 891-948 106-163 (174)
35 d1qyna_ d.33.1.1 (A:) Bacteria 30.7 7.5 0.00054 11.9 2.0 46 305-350 62-118 (134)
36 d1uoua3 d.41.3.1 (A:374-480) T 30.1 7.6 0.00056 11.8 1.5 24 538-562 59-82 (105)
37 d1zswa1 d.32.1.10 (A:1-144) Hy 28.4 8.1 0.00059 11.6 2.8 32 916-947 74-105 (144)
38 d2c8ma1 d.104.1.3 (A:1-256) Li 27.1 8.4 0.00062 11.4 3.2 138 852-1008 22-180 (256)
39 d1p99a_ c.94.1.1 (A:) Putative 26.7 8.6 0.00062 11.3 1.1 23 931-953 12-34 (255)
40 d2bsza1 d.3.1.5 (A:6-275) Aryl 26.5 8.6 0.00063 11.3 1.2 32 72-103 92-123 (270)
41 d3bwuc1 b.1.11.1 (C:1-121) Per 24.7 6.4 0.00047 12.4 -0.3 72 86-157 16-91 (121)
42 d1p5va1 b.1.11.1 (A:7-147) Cha 24.4 9.3 0.00068 11.0 2.0 74 85-159 22-99 (141)
43 d1qpza1 a.35.1.5 (A:2-58) Puri 23.6 9.6 0.0007 10.9 2.2 28 323-350 20-47 (57)
44 d1mkha_ b.40.4.4 (A:) C-termin 23.4 9.7 0.00071 10.9 1.7 26 963-994 75-100 (107)
45 d2c4ba1 d.1.1.2 (A:3-110) Barn 22.9 4.4 0.00032 13.9 -1.4 55 892-970 4-61 (108)
46 d1s3si_ d.15.1.2 (I:) p47 {Rat 22.6 9.4 0.00068 11.0 0.2 33 943-988 11-43 (50)
47 d1x2ga2 d.104.1.3 (A:1-246) Tw 22.3 10 0.00074 10.7 5.7 116 871-994 32-160 (246)
48 d1nnla_ c.108.1.4 (A:) Phospho 22.2 10 0.00074 10.7 3.4 75 890-973 105-186 (217)
49 d1f2ri_ d.15.2.1 (I:) Inhibito 21.8 10 0.00075 10.6 2.4 58 923-983 30-91 (100)
50 d3d37a1 b.106.1.1 (A:6-178) Ba 20.5 11 0.00079 10.4 3.2 58 891-950 106-164 (173)
No 1
>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=99.41 E-value=6.8e-12 Score=118.67 Aligned_cols=192 Identities=26% Similarity=0.288 Sum_probs=140.5
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHH-HCC-C-CCEEEEEECCCEEEECCC
Q ss_conf 6999988431011467899999999998089965486459960588633244311-127-6-620899973943686777
Q gi|254780662|r 915 GGSMGYDHKKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGM-LLS-R-KIQLVAAFDHSDIFIDPD 991 (1576)
Q Consensus 915 Ggs~GydHK~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgm-Lls-~-~i~lvaafdh~hif~DP~ 991 (1576)
|||.|-. -=|++|++.+++.-++.+|.+++...|.+-| .|.|.++.. +|+ + -.++|+.-|+.+-.++|+
T Consensus 1 GGs~gR~----eATg~Gv~~~~~~~~~~~~~~l~g~~vaIqG----~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~ 72 (234)
T d1b26a1 1 GGSKGRE----EATGRGVKVCAGLAMDVLGIDPKKATVAVQG----FGNVGQFAALLISQELGSKVVAVSDSRGGIYNPE 72 (234)
T ss_dssp TCCTTHH----HHHHHHHHHHHHHHHHHTTCCTTTCEEEEEC----CSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTT
T ss_pred CCCCCCC----CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC----CCHHHHHHHHHHHHHCCCCEEEEECCCCCEEECC
T ss_conf 9988855----2401889999999999759986889899989----8889999999999866875487645887088144
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCC
Q ss_conf 88137989999999668987003897871789708982144421798999870988554288899986303653044338
Q gi|254780662|r 992 PNSETTFDERKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFG 1071 (1576)
Q Consensus 992 PD~~~s~~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~g 1071 (1576)
+.+..++.++.+..++.- +|. .....++++ ++..|+|.|.+|
T Consensus 73 ---Gld~~~l~~~~~~~~~~~-~~~------------------------------~~~~~~~~~----~~~~~~DI~~Pc 114 (234)
T d1b26a1 73 ---GFDVEELIRYKKEHGTVV-TYP------------------------------KGERITNEE----LLELDVDILVPA 114 (234)
T ss_dssp ---CCCHHHHHHHHHHSSCST-TCS------------------------------SCEEECHHH----HHTSCCSEEEEC
T ss_pred ---CCCHHHHHHHHHHHCCEE-CCC------------------------------CCEEECCCC----CCCCCCCEEECC
T ss_conf ---202688899998621100-233------------------------------432212454----546664556002
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHH
Q ss_conf 74211126898620015210000002588304689985551030767899999739868353313443732440476799
Q gi|254780662|r 1072 GIGTYIRAPRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIK 1151 (1576)
Q Consensus 1072 GiGTYvka~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniK 1151 (1576)
. .+. ....+ |...++||+|+||||-.+|+.+.-.+..+|+.+.+|++.|+|||.+|-+|..
T Consensus 115 A--------~~~-~I~~~--------~a~~l~~~~I~e~AN~p~t~~a~~~L~~rgI~~~PD~~aNaGGVi~s~~E~~-- 175 (234)
T d1b26a1 115 A--------LEG-AIHAG--------NAERIKAKAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVSYFEWV-- 175 (234)
T ss_dssp S--------CTT-CBCHH--------HHTTCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHH--
T ss_pred H--------HCC-CCCHH--------HHHHHHHCEEEECCCCCCCHHHHHHHHHCCEEEECHHHHCCCCEEEEEHHCC--
T ss_conf 1--------003-23688--------9997531457614889888779999997993885658861877442100014--
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 986588770798988998899987
Q gi|254780662|r 1152 IALASAMRDGRLTLENRNKLLSSM 1175 (1576)
Q Consensus 1152 Ill~~~~~~g~lt~~~Rn~lL~~m 1175 (1576)
+-...-..+.++-++-|.++
T Consensus 176 ----qn~~~~~w~~e~V~~~l~~~ 195 (234)
T d1b26a1 176 ----QDLQSFFWDLDQVRNALEKM 195 (234)
T ss_dssp ----HHHTTCCCCHHHHHHHHHHH
T ss_pred ----CCCCHHCCCHHHHHHHHHHH
T ss_conf ----55201101099999999999
No 2
>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}
Probab=99.38 E-value=3.1e-12 Score=121.74 Aligned_cols=206 Identities=21% Similarity=0.198 Sum_probs=141.9
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHH--CCCCCEEEEEECCCEEEECC
Q ss_conf 0569999884310114678999999999980899654864599605886332443111--27662089997394368677
Q gi|254780662|r 913 ASGGSMGYDHKKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGML--LSRKIQLVAAFDHSDIFIDP 990 (1576)
Q Consensus 913 aSGgs~GydHK~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgmL--ls~~i~lvaafdh~hif~DP 990 (1576)
.-|||.|.. .-|++|+..+++.-++.+|.+++.. ||+.-| .|.|..+-+. .-...|+|++.|+.+-.+||
T Consensus 4 ~~GGs~gR~----eATG~Gv~~~~~~~~~~~~~~l~g~--~v~IQG--fGnVG~~~a~~L~e~GakvvavsD~~G~i~~~ 75 (255)
T d1bgva1 4 SFGGSLVRP----EATGYGSVYYVEAVMKHENDTLVGK--TVALAG--FGNVAWGAAKKLAELGAKAVTLSGPDGYIYDP 75 (255)
T ss_dssp GGTCCTTTT----THHHHHHHHHHHHHHHHTTCCSTTC--EEEECC--SSHHHHHHHHHHHHHTCEEEEEEETTEEEECT
T ss_pred CCCCCCCCC----CCCHHHHHHHHHHHHHHCCCCCCCC--EEEEEC--CCHHHHHHHHHHHHCCCEEEEEECCCCEEECC
T ss_conf 546899997----5103779999999999679897899--999979--78899999999998598589996588617658
Q ss_pred CCCCCCCHHHHHHHHH----CCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCE
Q ss_conf 7881379899999996----689870038978717897089821444217989998709885542888999863036530
Q gi|254780662|r 991 DPNSETTFDERKRLFD----SPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVD 1066 (1576)
Q Consensus 991 ~PD~~~s~~Er~RLf~----lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vD 1066 (1576)
+ |.+..+..+.+. ..+.+-.+|... .|+-. ++++ .++..|+|
T Consensus 76 ~---Gld~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------------~~~~----~~~~~~~D 121 (255)
T d1bgva1 76 E---GITTEEKINYMLEMRASGRNKVQDYADK---FGVQF------------------------FPGE----KPWGQKVD 121 (255)
T ss_dssp T---CSCSHHHHHHHHHHHHHCCCCTHHHHHH---HTCEE------------------------EETC----CGGGSCCS
T ss_pred C---CCCHHHHHHHHHHHHHHCCCCHHHHHHH---CCCEE------------------------ECHH----HCCCCCCC
T ss_conf 8---8887899999998864147614444430---38502------------------------0242----20456642
Q ss_pred EECCCCCCCEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHH-HHHHHHCCCEEECCCCCCCCCCCCCC
Q ss_conf 44338742111268986200152100000025883046899855510307678-99999739868353313443732440
Q gi|254780662|r 1067 LLWFGGIGTYIRAPRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQA-RVVYSLNGGRINSDAIDNSGGVNCSD 1145 (1576)
Q Consensus 1067 Llw~gGiGTYvka~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~-Rie~a~~Gg~intDaidNsaGV~~Sd 1145 (1576)
.|.+|. .+.-.. .++++ ++.+. .||+|+||||.-+|+.| ++.++.+|+.+.+|.+.|++||.+|-
T Consensus 122 iliPcA--------~~~~I~-~~~a~---~l~a~--~ck~I~EgAN~p~t~ea~~~ll~~~gI~vvPD~laNaGGVivSy 187 (255)
T d1bgva1 122 IIMPCA--------TQNDVD-LEQAK---KIVAN--NVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSG 187 (255)
T ss_dssp EEECCS--------CTTCBC-HHHHH---HHHHT--TCCEEECCSSSCBCHHHHHHHHHCTTCEEECHHHHTTHHHHHHH
T ss_pred EEEECC--------CCCCCC-HHHHH---HHHHC--CCEEEECCCCCCCCHHHHHHHHHHCCCEEEHHHHHCCCCEEEEH
T ss_conf 783123--------234255-88887---66524--73399547778765578999997369778657664287615531
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 47679998658877079898899889998789999
Q gi|254780662|r 1146 LEVNIKIALASAMRDGRLTLENRNKLLSSMTSEVV 1180 (1576)
Q Consensus 1146 ~EVniKIll~~~~~~g~lt~~~Rn~lL~~mtdeV~ 1180 (1576)
+|-. +-...-.-+.++-++-|.++-...-
T Consensus 188 ~E~~------qn~~~~~w~~~ev~~~l~~~m~~~~ 216 (255)
T d1bgva1 188 FEMS------QNSERLSWTAEEVDSKLHQVMTDIH 216 (255)
T ss_dssp HHHH------HHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4565------5555545668999999999999999
No 3
>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.34 E-value=2.4e-11 Score=113.91 Aligned_cols=196 Identities=29% Similarity=0.275 Sum_probs=141.7
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHH-HCC-C-CCEEEEEECCCEEEECCC
Q ss_conf 6999988431011467899999999998089965486459960588633244311-127-6-620899973943686777
Q gi|254780662|r 915 GGSMGYDHKKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGM-LLS-R-KIQLVAAFDHSDIFIDPD 991 (1576)
Q Consensus 915 Ggs~GydHK~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgm-Lls-~-~i~lvaafdh~hif~DP~ 991 (1576)
|||.|-+ .=|++|++.+++.-.+.+|.|. -+.-||+--|= |.|.++-. +|. + -.|+|+..|+.+..++|+
T Consensus 1 GGs~gR~----eATg~Gv~~~~~~~~~~~g~~~-l~g~~v~IqGf--GnVG~~~a~~L~~~~G~kvv~vsD~~g~i~~~~ 73 (239)
T d1gtma1 1 GGSLGRI----EATARGASYTIREAAKVLGWDT-LKGKTIAIQGY--GNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPD 73 (239)
T ss_dssp TCCTTTT----THHHHHHHHHHHHHHHHTTCSC-STTCEEEEECC--SHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEE
T ss_pred CCCCCCC----CHHHHHHHHHHHHHHHHHCCCC-CCCCEEEEECC--CHHHHHHHHHHHHHCCCCEEECCCCCCCEECCC
T ss_conf 9988874----0646999999999999719997-68999999798--899999999999836720020013655164377
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCC
Q ss_conf 88137989999999668987003897871789708982144421798999870988554288899986303653044338
Q gi|254780662|r 992 PNSETTFDERKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFG 1071 (1576)
Q Consensus 992 PD~~~s~~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~g 1071 (1576)
+.+..+..+.+... .+..+|+ |+ ..+++++ ++..|+|.|.+|
T Consensus 74 ---G~d~~~l~~~~~~~-~~~~~~~------~~------------------------~~~~~~~----i~~~~~DIl~Pc 115 (239)
T d1gtma1 74 ---GLNADEVLKWKNEH-GSVKDFP------GA------------------------TNITNEE----LLELEVDVLAPA 115 (239)
T ss_dssp ---EECHHHHHHHHHHH-SSSTTCT------TS------------------------EEECHHH----HHHSCCSEEEEC
T ss_pred ---CCCHHHHHHHHHHC-CCCCCCC------CC------------------------EEECCCC----CCCCCCCEEEEC
T ss_conf ---68889999998722-6554578------87------------------------3550232----111554577303
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHH
Q ss_conf 74211126898620015210000002588304689985551030767899999739868353313443732440476799
Q gi|254780662|r 1072 GIGTYIRAPRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIK 1151 (1576)
Q Consensus 1072 GiGTYvka~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniK 1151 (1576)
.+|- ....+ |...++||+|+||+|--+|+.+.-.+..+|+.+.+|++.|+|||.+|-+|..
T Consensus 116 A~~~---------~I~~~--------~a~~i~ak~I~e~AN~p~t~ea~~~L~~rgI~~iPD~~aNAGGVi~s~~E~~-- 176 (239)
T d1gtma1 116 AIEE---------VITKK--------NADNIKAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWV-- 176 (239)
T ss_dssp SCSC---------CBCTT--------GGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHH--
T ss_pred CCCC---------CCCHH--------HHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEECCHHHCCCCEEEEEEEEC--
T ss_conf 3104---------44498--------8873445478724789898789999997898794603307763267633201--
Q ss_pred HHHHHHHHCCCCCHHHHHHHH-HHHHHH
Q ss_conf 986588770798988998899-987899
Q gi|254780662|r 1152 IALASAMRDGRLTLENRNKLL-SSMTSE 1178 (1576)
Q Consensus 1152 Ill~~~~~~g~lt~~~Rn~lL-~~mtde 1178 (1576)
+-...-..+.++-++-| ..|.+-
T Consensus 177 ----qn~~~~~w~~~~v~~~l~~~m~~~ 200 (239)
T d1gtma1 177 ----QNITGYYWTIEEVRERLDKKMTKA 200 (239)
T ss_dssp ----HHHHCCCCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf ----343112365999999999999999
No 4
>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.31 E-value=2e-10 Score=105.58 Aligned_cols=167 Identities=24% Similarity=0.255 Sum_probs=124.9
Q ss_pred CCCCCHHHHHHHHHHHHHH------CCCCCCCCCEEEEEECCCCCCCCCCHHH--CCCCCEEEEEECCCEEEECCCCCCC
Q ss_conf 1011467899999999998------0899654864599605886332443111--2766208999739436867778813
Q gi|254780662|r 924 KMGITARGAWETVKRHFRE------MDIDIQSTPFTVAGVGDMSGDVFGNGML--LSRKIQLVAAFDHSDIFIDPDPNSE 995 (1576)
Q Consensus 924 ~mGITarGaw~~v~rhfre------lg~D~q~~~fTvvgiGdmsGDVfGNgmL--ls~~i~lvaafdh~hif~DP~PD~~ 995 (1576)
.-.=|++|++.+++.-++. +|++..-+.-||+.-| .|.|..+... .....|+|+..|+.+..++|+ +
T Consensus 3 R~eATG~GV~~~~~~~l~~~~~~~~~gl~~~L~gktvaIqG--fGnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~---G 77 (293)
T d1hwxa1 3 RISATGRGVFHGIENFIENASYMSILGMTPGFGDKTFAVQG--FGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPD---G 77 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHTCCSSSTTCEEEEEC--CSHHHHHHHHHHHHTTCEEEEEEETTEEECCTT---C
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEC--CCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCC---C
T ss_conf 85070989999999999855421120677787898899989--889999999999987998999984522320665---2
Q ss_pred CCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCC
Q ss_conf 79899999996689870038978717897089821444217989998709885542888999863036530443387421
Q gi|254780662|r 996 TTFDERKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGT 1075 (1576)
Q Consensus 996 ~s~~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGT 1075 (1576)
.+.+++.+.++..++ ..+|... ..+++ .++..|+|+|
T Consensus 78 ld~~~L~~~~~~~~~-~~~~~~~-------------------------------~~~~~----~~~~~~~DIl------- 114 (293)
T d1hwxa1 78 IDPKELEDFKLQHGT-ILGFPKA-------------------------------KIYEG----SILEVDCDIL------- 114 (293)
T ss_dssp CCHHHHHHHHHTTSS-STTCTTS-------------------------------CBCCS----CGGGCCCSEE-------
T ss_pred CCHHHHHHHHHHCCC-EECCCCC-------------------------------CCCCC----CCCCCCCCEE-------
T ss_conf 116899999997097-0113322-------------------------------46774----2016775588-------
Q ss_pred EECCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHH
Q ss_conf 1126898620015210000002588304689985551030767899999739868353313443732440476
Q gi|254780662|r 1076 YIRAPRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEV 1148 (1576)
Q Consensus 1076 Yvka~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EV 1148 (1576)
+||..+.-. ..+ |...++||+|+||||--+|+.|--.|..+|+.+.+|.+.|+|||.+|-+|-
T Consensus 115 -iPaA~~~~I-~~~--------~a~~l~ak~I~EgAN~P~t~eA~~~L~~~gI~viPD~laNAGGV~vSy~Ew 177 (293)
T d1hwxa1 115 -IPAASEKQL-TKS--------NAPRVKAKIIAEGANGPTTPQADKIFLERNIMVIPDLYLNAGGVTVSYFQI 177 (293)
T ss_dssp -EECSSSSCB-CTT--------TGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHH
T ss_pred -EECCCCCCC-CHH--------HHHHHHHCEEECCCCCCCCCCHHHHHHHCCCEEECHHHHCCCHHHHHHHHH
T ss_conf -325431643-387--------799885387753278988833689999789878172652574577679888
No 5
>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}
Probab=99.29 E-value=1.9e-11 Score=114.76 Aligned_cols=195 Identities=21% Similarity=0.187 Sum_probs=134.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHH--CCCCCEEEEEECCCEEEECCCCCCCCCHHHHHH
Q ss_conf 114678999999999980899654864599605886332443111--276620899973943686777881379899999
Q gi|254780662|r 926 GITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGML--LSRKIQLVAAFDHSDIFIDPDPNSETTFDERKR 1003 (1576)
Q Consensus 926 GITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgmL--ls~~i~lvaafdh~hif~DP~PD~~~s~~Er~R 1003 (1576)
.-|++|+..+++.-++.+|.+++...+.|-| .|.|.++-+. .....|+|+.-|+.+-.+||+ +.+.++..+
T Consensus 8 ~ATg~Gv~~~~~~~~~~~~~~l~g~~v~IqG----fGnVG~~~a~~L~~~Gakvv~vsD~~g~i~~~~---Gld~~~l~~ 80 (242)
T d1v9la1 8 YATGFGVAVATREMAKKLWGGIEGKTVAIQG----MGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKE---GLNVELIQK 80 (242)
T ss_dssp GHHHHHHHHHHHHHHHHHHSCCTTCEEEEEC----CSHHHHHHHHHHHTTTCEEEEEECSSCEEECTT---CCCTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC----CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC---CCCHHHHHH
T ss_conf 2334779999999999759997999999989----889999999999976983799606542101655---442899999
Q ss_pred HHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCCCC
Q ss_conf 99668987003897871789708982144421798999870988554288899986303653044338742111268986
Q gi|254780662|r 1004 LFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGTYIRAPREN 1083 (1576)
Q Consensus 1004 Lf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGTYvka~~e~ 1083 (1576)
..+.-++...+|-.. .+|+ +....|+ .++..|+|+|.+|. .+.
T Consensus 81 ~~~~~~~~~~~~~~~--~~~~-----------------------~~~~~~~----~i~~~~~DIliPcA--------~~~ 123 (242)
T d1v9la1 81 NKGLTGPALVELFTT--KDNA-----------------------EFVKNPD----AIFKLDVDIFVPAA--------IEN 123 (242)
T ss_dssp TTTSCHHHHHHHHHH--TSCC-----------------------CCCSSTT----GGGGCCCSEEEECS--------CSS
T ss_pred HHHCCHHHHHHHHHH--CCCC-----------------------EEEECCC----HHCCCCCCEEEECC--------HHC
T ss_conf 864003667776552--1475-----------------------5751760----21033542784244--------110
Q ss_pred CCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 20015210000002588304689985551030767899999739868353313443732440476799986588770798
Q gi|254780662|r 1084 NADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIKIALASAMRDGRL 1163 (1576)
Q Consensus 1084 ~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniKIll~~~~~~g~l 1163 (1576)
....+ +...++||+|+||||--+|+.+.-.+..+|+.+.+|++.|+|||.+|-+|- .+-...-..
T Consensus 124 -~I~~~--------~a~~i~ak~IvegAN~p~t~~a~~~L~~rgI~~~PD~~aNaGGVi~s~~E~------~qn~~~~~w 188 (242)
T d1v9la1 124 -VIRGD--------NAGLVKARLVVEGANGPTTPEAERILYERGVVVVPDILANAGGVIMSYLEW------VENLQWYIW 188 (242)
T ss_dssp -CBCTT--------TTTTCCCSEEECCSSSCBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHH------HHHHTTCCC
T ss_pred -CCCHH--------HHHHCCCCEEEECCCCCCCHHHHHHHHHCCEEEECCHHHCCCCHHHHHHHH------CCCCCCCCC
T ss_conf -03488--------887425677984378878733899987388699573664675112235442------254111238
Q ss_pred CHHHHHHHHHH-HHHHH
Q ss_conf 98899889998-78999
Q gi|254780662|r 1164 TLENRNKLLSS-MTSEV 1179 (1576)
Q Consensus 1164 t~~~Rn~lL~~-mtdeV 1179 (1576)
+.++=++-|.. |++-.
T Consensus 189 ~~e~v~~~l~~im~~~~ 205 (242)
T d1v9la1 189 DEEETRKRLENIMVNNV 205 (242)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999
No 6
>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}
Probab=98.61 E-value=5.2e-08 Score=84.22 Aligned_cols=150 Identities=21% Similarity=0.250 Sum_probs=99.3
Q ss_pred CCCCCHHHHHHHHHHHHHHC--CCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCEEEECCCCCCCCCHHHH
Q ss_conf 10114678999999999980--8996548645996058863324431112766208999739436867778813798999
Q gi|254780662|r 924 KMGITARGAWETVKRHFREM--DIDIQSTPFTVAGVGDMSGDVFGNGMLLSRKIQLVAAFDHSDIFIDPDPNSETTFDER 1001 (1576)
Q Consensus 924 ~mGITarGaw~~v~rhfrel--g~D~q~~~fTvvgiGdmsGDVfGNgmLls~~i~lvaafdh~hif~DP~PD~~~s~~Er 1001 (1576)
.-..|++|++.+++.-.+.+ +-+.+.-.|.|-|.|-...-+. -+|.-...|+|+. |.+++ ..
T Consensus 12 ~~~aTg~GV~~~~~~~~~~~~g~~~l~g~~v~IqG~GnVG~~~a--~~L~~~Gakvv~~--------d~~~~------~~ 75 (230)
T d1leha1 12 PSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALC--KKLNTEGAKLVVT--------DVNKA------AV 75 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHH--HHHHHTTCEEEEE--------CSCHH------HH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH--HHHHHCCCEEEEE--------CCCHH------HH
T ss_conf 98201889999999999981199997899999989888999999--9999879989751--------43378------89
Q ss_pred HHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCC
Q ss_conf 99996689870038978717897089821444217989998709885542888999863036530443387421112689
Q gi|254780662|r 1002 KRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGTYIRAPR 1081 (1576)
Q Consensus 1002 ~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGTYvka~~ 1081 (1576)
..+.+.+ |. ...+++ .++..|+|+|.+|..|--|
T Consensus 76 ~~~~~~~---------------g~-----------------------~~~~~~----~~~~~~cDIl~PcA~~~~I---- 109 (230)
T d1leha1 76 SAAVAEE---------------GA-----------------------DAVAPN----AIYGVTCDIFAPCALGAVL---- 109 (230)
T ss_dssp HHHHHHH---------------CC-----------------------EECCGG----GTTTCCCSEEEECSCSCCB----
T ss_pred HHHHHHC---------------CC-----------------------CCCCCC----CCCCCCCCEECCCCCCCCC----
T ss_conf 9999833---------------97-----------------------326874----3235665576405555644----
Q ss_pred CCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCC-HHHHHHHHHCCCEEECCCCCCCCCCCCCCHHH
Q ss_conf 86200152100000025883046899855510307-67899999739868353313443732440476
Q gi|254780662|r 1082 ENNADIGDKGNNILRVTADKVRAKVIGEGANLGLT-QQARVVYSLNGGRINSDAIDNSGGVNCSDLEV 1148 (1576)
Q Consensus 1082 e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~T-q~~Rie~a~~Gg~intDaidNsaGV~~Sd~EV 1148 (1576)
..+ +...++||+|+||||=++| +.+.-.+..+|+.+.+|++.|+|||++|-+|.
T Consensus 110 -----~~~--------~~~~l~ak~Ive~ANn~~t~~ea~~~L~~rGI~~iPD~laNAGGVi~s~~E~ 164 (230)
T d1leha1 110 -----NDF--------TIPQLKAKVIAGSADNQLKDPRHGKYLHELGIVYAPDYVINAGGVINVADEL 164 (230)
T ss_dssp -----STT--------HHHHCCCSEECCSCSCCBSSHHHHHHHHHHTCEECCHHHHTTHHHHHHHHGG
T ss_pred -----CHH--------HHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCEEEEEHHHCCCCHHHHHHHH
T ss_conf -----767--------7625576489836667777801999998608689832553355021034665
No 7
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}
Probab=98.54 E-value=1.4e-07 Score=80.46 Aligned_cols=163 Identities=17% Similarity=0.138 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHHHHHCCC-CCCCCCEEEEEECCCCCCCCCCHH--HCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHH
Q ss_conf 467899999999998089-965486459960588633244311--12766208999739436867778813798999999
Q gi|254780662|r 928 TARGAWETVKRHFREMDI-DIQSTPFTVAGVGDMSGDVFGNGM--LLSRKIQLVAAFDHSDIFIDPDPNSETTFDERKRL 1004 (1576)
Q Consensus 928 TarGaw~~v~rhfrelg~-D~q~~~fTvvgiGdmsGDVfGNgm--Lls~~i~lvaafdh~hif~DP~PD~~~s~~Er~RL 1004 (1576)
|++|+..+++.-.+..|. +.+.- ||+-.| .|.|.+.-. |...-.|++ ..|+||+.. .+.
T Consensus 5 Ta~Gv~~~~~~~~~~~g~~~L~gk--~v~IqG--~G~VG~~~A~~L~~~Gakvv--------v~d~d~~~~------~~~ 66 (201)
T d1c1da1 5 TAVGVFEAMKATVAHRGLGSLDGL--TVLVQG--LGAVGGSLASLAAEAGAQLL--------VADTDTERV------AHA 66 (201)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSTTC--EEEEEC--CSHHHHHHHHHHHHTTCEEE--------EECSCHHHH------HHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCC--EEEEEC--CCHHHHHHHHHHHHCCCEEE--------EECCHHHHH------HHH
T ss_conf 588999999999998299988999--999989--88899999999997799899--------961607777------777
Q ss_pred HHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCCCCC
Q ss_conf 96689870038978717897089821444217989998709885542888999863036530443387421112689862
Q gi|254780662|r 1005 FDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGTYIRAPRENN 1084 (1576)
Q Consensus 1005 f~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGTYvka~~e~~ 1084 (1576)
-.+ | ....+++ .++..++|+|.+|.. +.
T Consensus 67 ~~~---------------g------------------------~~~~~~~----~~~~~~~DI~iPcA~--------~~- 94 (201)
T d1c1da1 67 VAL---------------G------------------------HTAVALE----DVLSTPCDVFAPCAM--------GG- 94 (201)
T ss_dssp HHT---------------T------------------------CEECCGG----GGGGCCCSEEEECSC--------SC-
T ss_pred HHH---------------C------------------------CCCCCCC----CCCCCCCEEEECCCC--------CC-
T ss_conf 762---------------3------------------------5556743----123435426602454--------56-
Q ss_pred CCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHH-HHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 00152100000025883046899855510307678-99999739868353313443732440476799986588770798
Q gi|254780662|r 1085 ADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQA-RVVYSLNGGRINSDAIDNSGGVNCSDLEVNIKIALASAMRDGRL 1163 (1576)
Q Consensus 1085 ~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~-Rie~a~~Gg~intDaidNsaGV~~Sd~EVniKIll~~~~~~g~l 1163 (1576)
....+.+ ..++||+|+||||-.+|+.+ .-.+..+|..+.+|++.|+|||.+|-+|- ....
T Consensus 95 ~I~~~~a--------~~i~ak~i~e~AN~p~~~~~~~~~L~~rgI~~iPD~laNAGGVi~~~~~~-----------~~~~ 155 (201)
T d1c1da1 95 VITTEVA--------RTLDCSVVAGAANNVIADEAASDILHARGILYAPDFVANAGGAIHLVGRE-----------VLGW 155 (201)
T ss_dssp CBCHHHH--------HHCCCSEECCSCTTCBCSHHHHHHHHHTTCEECCHHHHTTHHHHHHHHHH-----------TTCC
T ss_pred CCCHHHH--------HHHHHHEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHH-----------HCCC
T ss_conf 6668887--------30101135635899755043899960256399843654363487899998-----------7079
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9889988999878999
Q gi|254780662|r 1164 TLENRNKLLSSMTSEV 1179 (1576)
Q Consensus 1164 t~~~Rn~lL~~mtdeV 1179 (1576)
+.++=++.|..|.+-+
T Consensus 156 ~~~~v~~~l~~i~~~~ 171 (201)
T d1c1da1 156 SESVVHERAVAIGDTL 171 (201)
T ss_dssp CHHHHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHHH
T ss_conf 9999999999999999
No 8
>d1v9la2 c.58.1.1 (A:4-179) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}
Probab=97.42 E-value=0.00068 Score=47.73 Aligned_cols=117 Identities=18% Similarity=0.202 Sum_probs=77.1
Q ss_pred EEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC--CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 579984054233040420088578888899989984532874--288875327871689988998999999999999999
Q gi|254780662|r 774 VEGVHLRCGKIARGGLRWSDRAADYRTEVLGLVRAQKVKNAV--IVPVGAKGGFYPKRLPSEGRRDEIIKIGREAYKTYV 851 (1576)
Q Consensus 774 ~eGvHlR~g~vARGGlRwSdR~edfrtEvlgL~kaQ~vKN~v--Ivp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y~~fi 851 (1576)
+.-+|=--.--|.||+|++.-. =..||+.|+.....||++ +|=+|+|||+.+. |..-++ .|..+..+.|+
T Consensus 54 yRvqHn~~lGPakGGiR~~~~v--~~~ev~aLA~~MT~K~Al~~lp~GGgKggI~~d--p~~~s~----~E~er~~r~f~ 125 (176)
T d1v9la2 54 YRVQHCDVLGPYKGGVRFHPEV--TLADDVALAILMTLKNSLAGLPYGGAKGAVRVD--PKKLSQ----RELEELSRGYA 125 (176)
T ss_dssp EEEEEECSSSSEEEEEECCTTC--CHHHHHHHHHHHHHHHHHTTCSCCEEEEEECSC--GGGSCH----HHHHHHHHHHH
T ss_pred EEEEECHHHHCCCCCEEECCCC--CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC--CCCCCH----HHHHHHHHHHH
T ss_conf 7999835643316760577879--989999999999999998288865765214358--877997----99999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH--HHHHHHHHHHHCCCCCCCHHCCCCCC
Q ss_conf 89887762568884028831030538986799817788832--68999999988089985011056999
Q gi|254780662|r 852 RALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT--FSDTANILAQEAKFWLDDAFASGGSM 918 (1576)
Q Consensus 852 ~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~--fsD~An~ia~~~gfwlgdAFaSGgs~ 918 (1576)
+.|-++. |.+-+ +-|+|=||-. +.=++.+.+.-.|+.-. +..+||+.
T Consensus 126 ~~l~~~i------------------G~~~d-ipApDvGt~~~~M~wi~dey~~~~g~~~~-g~vTGKP~ 174 (176)
T d1v9la2 126 RAIAPLI------------------GDVVD-IPAPDVGTNAQIMAWMVDEYSKIKGYNVP-GVFTSKPP 174 (176)
T ss_dssp HHHGGGC------------------BTTTE-EEECCTTCCHHHHHHHHHHHHHHHTSCCG-GGSCSCCS
T ss_pred HHHHHCC------------------CCCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCC-CEEECCCC
T ss_conf 9999727------------------99850-04765788999999999988886298888-02617788
No 9
>d1bgva2 c.58.1.1 (A:1-194) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}
Probab=97.34 E-value=0.001 Score=46.16 Aligned_cols=103 Identities=19% Similarity=0.126 Sum_probs=69.7
Q ss_pred EEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC--CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 84054233040420088578888899989984532874--2888753278716899889989999999999999998988
Q gi|254780662|r 778 HLRCGKIARGGLRWSDRAADYRTEVLGLVRAQKVKNAV--IVPVGAKGGFYPKRLPSEGRRDEIIKIGREAYKTYVRALL 855 (1576)
Q Consensus 778 HlR~g~vARGGlRwSdR~edfrtEvlgL~kaQ~vKN~v--Ivp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y~~fi~~lL 855 (1576)
|=--.-=+.||+|++....- .||+.|+..+..|||+ +|=||+|||+.+. |..-+++ |-.+..+.|++.|-
T Consensus 81 hn~~lGP~kGGiR~~~~v~~--~ev~~La~~MT~K~Al~~lp~GGgKggi~~d--P~~~s~~----el~r~~r~~~~~l~ 152 (194)
T d1bgva2 81 FNGAIGPYKGGLRFAPSVNL--SIMKFLGFEQAFKDSLTTLPMGGAKGGSDFD--PNGKSDR----EVMRFCQAFMTELY 152 (194)
T ss_dssp EECSSSSEEEEEEECTTCCH--HHHHHHHHHHHHHHHHTSSSCCEEEEEESCC--CTTCCHH----HHHHHHHHHHHHHG
T ss_pred ECCCCCCCCCCEEECCCCCH--HHHHHHHHHHHHHHHHCCCCCCCCCCEECCC--CCCCCHH----HHHHHHHHHHHHHC
T ss_conf 33876876777046675899--9999998888875543278745654312369--8899999----99999999999735
Q ss_pred HHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH--HHHHHHHHHHHCCCC
Q ss_conf 7762568884028831030538986799817788832--689999999880899
Q gi|254780662|r 856 SITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT--FSDTANILAQEAKFW 907 (1576)
Q Consensus 856 ditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~--fsD~An~ia~~~gfw 907 (1576)
... |.|-| |-|+|=||.. +.=++-+.+.-.|.+
T Consensus 153 ~~i------------------g~~~D-IpApDvgt~~~eM~wi~d~y~~~~g~~ 187 (194)
T d1bgva2 153 RHI------------------GPDID-VPAGDLGVGAREIGYMYGQYRKIVGGF 187 (194)
T ss_dssp GGC------------------BTTTE-EEECBTTBCHHHHHHHHHHHHHHHTSC
T ss_pred CCC------------------CCCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 346------------------88860-057768978999999999899864978
No 10
>d1c1da2 c.58.1.1 (A:1-148) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}
Probab=97.22 E-value=0.0022 Score=43.24 Aligned_cols=115 Identities=19% Similarity=0.088 Sum_probs=76.7
Q ss_pred EEEEECCCCCCCEEEEE--CCHHHHHHHHHHHHHHHHHCCCC--CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99840542330404200--88578888899989984532874--288875327871689988998999999999999999
Q gi|254780662|r 776 GVHLRCGKIARGGLRWS--DRAADYRTEVLGLVRAQKVKNAV--IVPVGAKGGFYPKRLPSEGRRDEIIKIGREAYKTYV 851 (1576)
Q Consensus 776 GvHlR~g~vARGGlRwS--dR~edfrtEvlgL~kaQ~vKN~v--Ivp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y~~fi 851 (1576)
.+|=-----|-||+|+. ...++-.+|++.|+++...||++ ++=+|+|||+.........+ .+..++-.+.|..||
T Consensus 28 aIH~t~lGPa~GG~R~~~y~s~~~al~dvl~LA~~MT~K~Alaglp~GGgKg~I~~dp~~~~~~-~~e~~~l~r~~~~~l 106 (148)
T d1c1da2 28 RLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSVIALPAPRHSID-PSTWARILRIHAENI 106 (148)
T ss_dssp EEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEEEECSSCGGGCC-HHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHHHH
T ss_conf 9937998887422897457777889999999999989998750377787325874388768879-999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH-HHHHHHHHHHHCCCCCCCHHCCCCCC
Q ss_conf 89887762568884028831030538986799817788832-68999999988089985011056999
Q gi|254780662|r 852 RALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT-FSDTANILAQEAKFWLDDAFASGGSM 918 (1576)
Q Consensus 852 ~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~-fsD~An~ia~~~gfwlgdAFaSGgs~ 918 (1576)
+.|. |. .+.|+|=||-. -++|. +.++.|--|..-..|||.
T Consensus 107 ~~l~--------G~----------------yi~a~DvGt~~~dm~~i---~~~t~~vtGk~~~~GGsG 147 (148)
T d1c1da2 107 DKLS--------GN----------------YWTGPDVNTNSADMDTL---NDTTEFVFGRSLERGGAG 147 (148)
T ss_dssp HHTT--------TS----------------EEEEECTTCCHHHHHHH---HHHCSCBCCCCGGGTSCC
T ss_pred HHHC--------CC----------------EEECCCCCCCHHHHHHH---HHHCCEEEECCCCCCCCC
T ss_conf 9847--------96----------------76667789999999999---855891681275668889
No 11
>d1b26a2 c.58.1.1 (A:4-178) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=97.00 E-value=0.0012 Score=45.53 Aligned_cols=113 Identities=20% Similarity=0.196 Sum_probs=73.6
Q ss_pred EEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 98405423304042008857888889998998453287--4288875327871689988998999999999999999898
Q gi|254780662|r 777 VHLRCGKIARGGLRWSDRAADYRTEVLGLVRAQKVKNA--VIVPVGAKGGFYPKRLPSEGRRDEIIKIGREAYKTYVRAL 854 (1576)
Q Consensus 777 vHlR~g~vARGGlRwSdR~edfrtEvlgL~kaQ~vKN~--vIvp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y~~fi~~l 854 (1576)
.|=--.-=+.||+|++..- =..||..|+.....||+ .+|=+|+|||+.+. |..-+++ |-.+..+.|++.|
T Consensus 56 qhn~~~GP~kGGiR~~~~v--~~~ev~aLa~~MT~K~A~~~lP~GGgKggi~~d--P~~~s~~----Eler~~r~f~~~l 127 (175)
T d1b26a2 56 QHNVARGPAKGGIRYHPDV--TLDEVKALAFWMTWKTAVMNLPFGGGKGGVRVD--PKKLSRN----ELERLSRRFFSEI 127 (175)
T ss_dssp EEECTTSSEEEEEEECSSC--CHHHHHHHHHHHHHHHHHHTCSCEEEEEEEECC--GGGSCHH----HHHHHHHHHHHHG
T ss_pred EEECCCCCCCCCEEECCCC--CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC--CCCCCHH----HHHHHHHHHHHHH
T ss_conf 8604234346871476202--589999998898887885077645654225348--7789989----9999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH--HHHHHHHHHHHCCCCCCCHHCCCCC
Q ss_conf 87762568884028831030538986799817788832--6899999998808998501105699
Q gi|254780662|r 855 LSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT--FSDTANILAQEAKFWLDDAFASGGS 917 (1576)
Q Consensus 855 LditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~--fsD~An~ia~~~gfwlgdAFaSGgs 917 (1576)
-++. + | +- =+-|||=||.. +.=++.+.+.-.|+.-. +..+||+
T Consensus 128 ~~~i----G-----~---------~~-dipApDvgT~~~~M~wi~dey~~~~g~~~~-g~vTGKp 172 (175)
T d1b26a2 128 QVII----G-----P---------YN-DIPAPDVNTNADVIAWYMDTYSMNVGHTVL-GIVTGKP 172 (175)
T ss_dssp GGTC----B-----T---------TT-EEEECCTTCCHHHHHHHHHHHHHHHTSCCC-CSCSSCC
T ss_pred HHCC----C-----C---------CC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCC-EEEECCC
T ss_conf 8565----9-----7---------74-023675788899999999988875398576-0572686
No 12
>d1gtma2 c.58.1.1 (A:3-180) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.96 E-value=0.0019 Score=43.84 Aligned_cols=115 Identities=18% Similarity=0.210 Sum_probs=73.6
Q ss_pred EEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 98405423304042008857888889998998453287--4288875327871689988998999999999999999898
Q gi|254780662|r 777 VHLRCGKIARGGLRWSDRAADYRTEVLGLVRAQKVKNA--VIVPVGAKGGFYPKRLPSEGRRDEIIKIGREAYKTYVRAL 854 (1576)
Q Consensus 777 vHlR~g~vARGGlRwSdR~edfrtEvlgL~kaQ~vKN~--vIvp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y~~fi~~l 854 (1576)
.|---.-=+.||+|++..-. ..||..|+.-...||+ .++-+|+|||+.+. |..-+.. |..+--+.|+++|
T Consensus 57 qhn~~~GP~kGGiR~~~~v~--~~ev~aLa~~MT~K~Al~~lp~GG~Kggi~~d--P~~~s~~----eler~~r~f~~~l 128 (178)
T d1gtma2 57 QHNWARGPTKGGIRWHPEET--LSTVKALAAWMTWKTAVMDLPYGGGKGGIIVD--PKKLSDR----EKERLARGYIRAI 128 (178)
T ss_dssp EEECTTSSEECCEEECTTCC--HHHHHHHHHHHHHHHHHTTCSCEEEEEEEECC--GGGSCHH----HHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCEEECCCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC--CCCCCHH----HHHHHHHHHHHHH
T ss_conf 98785588778847986588--89999999999888874157778875057248--7788878----8999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH--HHHHHHHHHHHCCCCCCC-HHCCCCCC
Q ss_conf 87762568884028831030538986799817788832--689999999880899850-11056999
Q gi|254780662|r 855 LSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT--FSDTANILAQEAKFWLDD-AFASGGSM 918 (1576)
Q Consensus 855 LditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~--fsD~An~ia~~~gfwlgd-AFaSGgs~ 918 (1576)
-.+. |.+-| +-|+|=||.. +.=++.+.+.-.|.+-.. +-.+||+.
T Consensus 129 ~~~i------------------G~~~d-ipApDvgt~~~~M~wi~dey~~~~~~~~~~~gvvTGKp~ 176 (178)
T d1gtma2 129 YDVI------------------SPYED-IPAPDVYTNPQIMAWMMDEYETISRRKTPAFGIITGKPL 176 (178)
T ss_dssp GGGC------------------BTTTE-ECCBCTTCCHHHHHHHHHHHHHHHTTSSCGGGGCSSCCG
T ss_pred HHCC------------------CCCCE-ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
T ss_conf 8425------------------98846-426657877999999999999853962677667868775
No 13
>d1hwxa2 c.58.1.1 (A:1-208) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}
Probab=96.62 E-value=0.0021 Score=43.32 Aligned_cols=117 Identities=21% Similarity=0.183 Sum_probs=72.4
Q ss_pred EEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC--CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9984054233040420088578888899989984532874--28887532787168998899899999999999999989
Q gi|254780662|r 776 GVHLRCGKIARGGLRWSDRAADYRTEVLGLVRAQKVKNAV--IVPVGAKGGFYPKRLPSEGRRDEIIKIGREAYKTYVRA 853 (1576)
Q Consensus 776 GvHlR~g~vARGGlRwSdR~edfrtEvlgL~kaQ~vKN~v--Ivp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y~~fi~~ 853 (1576)
-.|=--.--+.||+|++..- =.+||+.|+.....|||+ +|=||+|||+.+. |..-+. .|-.+..+.|++.
T Consensus 80 ~qHn~~lGP~kGGiR~~p~v--~~~ev~aLA~~MT~K~Al~~lP~GGgKggI~~d--P~~~s~----~Eler~~r~f~~~ 151 (208)
T d1hwxa2 80 AQHSHQRTPCKGGIRYSTDV--SVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN--PKNYTD----EDLEKITRRFTME 151 (208)
T ss_dssp EECCCSSSSEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCC--GGGSCH----HHHHHHHHHHHHH
T ss_pred EEECCCHHCCCCCCEECHHH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC--CCCCCH----HHHHHHHHHHHHH
T ss_conf 99787131127871677654--588999999999999986054446754324248--888998----9999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH-HHHHHH-HHHHHCCCCC--CCHHCCCCC
Q ss_conf 887762568884028831030538986799817788832-689999-9998808998--501105699
Q gi|254780662|r 854 LLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT-FSDTAN-ILAQEAKFWL--DDAFASGGS 917 (1576)
Q Consensus 854 lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~-fsD~An-~ia~~~gfwl--gdAFaSGgs 917 (1576)
|-.- +..+ .|-| |-|||=||.. -++|.- +.+.-+|..- .-+..+||+
T Consensus 152 L~~~--~~ig--------------p~~d-IpApDvgT~~~eM~wi~d~y~~~~g~~~~~~~g~vTGKp 202 (208)
T d1hwxa2 152 LAKK--GFIG--------------PGVD-VPAPNMSTGEREMSWIADTYASTIGHYDINAHACVTGKP 202 (208)
T ss_dssp HHHT--TCCB--------------TTTE-EEECBTTBCHHHHHHHHHHHHTTGGGGCTTGGGGCSSCC
T ss_pred HHCC--CCCC--------------CCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
T ss_conf 6201--6106--------------8877-568654520998999972056516988888863695784
No 14
>d1leha2 c.58.1.1 (A:1-134) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}
Probab=96.39 E-value=0.006 Score=39.32 Aligned_cols=106 Identities=23% Similarity=0.236 Sum_probs=68.7
Q ss_pred CEEEEEECCC-----EEEEEEECCCCCCCEEEEE--CCHHHHHHHHHHHHHHHHHCCCC--CCCCCCCEEEEECCCCCCC
Q ss_conf 5699998386-----5799840542330404200--88578888899989984532874--2888753278716899889
Q gi|254780662|r 764 HREIFVYGVE-----VEGVHLRCGKIARGGLRWS--DRAADYRTEVLGLVRAQKVKNAV--IVPVGAKGGFYPKRLPSEG 834 (1576)
Q Consensus 764 ~~eifv~sp~-----~eGvHlR~g~vARGGlRwS--dR~edfrtEvlgL~kaQ~vKN~v--Ivp~GaKGgfv~k~~~~~~ 834 (1576)
-..+|++.+. +-.+|=--.--|.||+|+. ...++-.+|++.|+++-.+||++ ++=+|+|||+.+. |...
T Consensus 13 e~v~~~~d~~tgl~a~iaihnt~~GPa~GG~R~~~y~s~~~al~dvlrLA~~MT~K~ala~lp~GGgK~vI~~d--p~~~ 90 (134)
T d1leha2 13 EQLVFCQDEASGLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTVIIGD--PFAD 90 (134)
T ss_dssp CEEEEEEETTTTEEEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEEEESC--TTTT
T ss_pred CEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC--CCCC
T ss_conf 38999836777858999991799888754179865698889999999999997887764178888855655459--8889
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH-HHHHHHH
Q ss_conf 9899999999999999989887762568884028831030538986799817788832-6899999
Q gi|254780662|r 835 RRDEIIKIGREAYKTYVRALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT-FSDTANI 899 (1576)
Q Consensus 835 ~r~~~~~e~~~~y~~fi~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~-fsD~An~ 899 (1576)
+++ +..+.|..|++.| .| .| +.|+|=||-. -++|...
T Consensus 91 ~~~----el~r~~~~~v~~L--------~g---------------~y-i~a~DvGt~~~dm~~i~~ 128 (134)
T d1leha2 91 KNE----DMFRALGRFIQGL--------NG---------------RY-ITAEDVGTTVDDMDLIHQ 128 (134)
T ss_dssp CCH----HHHHHHHHHHHTT--------TT---------------SE-EBCBCTTCCHHHHHHHHT
T ss_pred CHH----HHHHHHHHHHHHC--------CC---------------CE-ECCCCCCCCHHHHHHHHH
T ss_conf 999----9999999999857--------99---------------68-816978989999999997
No 15
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=81.68 E-value=1.1 Score=19.29 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=31.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCE
Q ss_conf 79999478774389999999997799127998464
Q gi|254780662|r 88 SIITVIVDNIPFLYQSIIGEIVARCRNLTMAVHPV 122 (1576)
Q Consensus 88 tvi~iv~dD~PfLvDSv~~~l~~~~~~i~~~~HPv 122 (1576)
.||.++++|.|=+|-.|+..|..+|.+|.-+-+-+
T Consensus 3 ~vitv~g~DrpGiVa~vt~~l~~~g~NI~d~~q~~ 37 (83)
T d1zpva1 3 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTV 37 (83)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 99999958988799999999997898399978598
No 16
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=71.47 E-value=1.9 Score=17.12 Aligned_cols=69 Identities=14% Similarity=0.184 Sum_probs=46.8
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEECCCCCCCCCCEEEEEEEECCCCHHHHHHH
Q ss_conf 86579999478774389999999997799127998464899988997374236778876633699999579998999999
Q gi|254780662|r 85 ISISIITVIVDNIPFLYQSIIGEIVARCRNLTMAVHPVFTKDKNCDWQLYSPESCGIAQKQISLIQIHCLKITPEEAIEI 164 (1576)
Q Consensus 85 s~~tvi~iv~dD~PfLvDSv~~~l~~~~~~i~~~~HPvl~V~RD~~G~L~~v~~~~~~~~~ES~I~Ieidr~~~e~~~~L 164 (1576)
+.|-||.++.+|.|=+|..|+..+.++|.+|.-.-.-++ . +..-..+.++++ +...++|
T Consensus 3 ~~~~vitv~G~DrpGiva~vt~~l~~~g~NI~d~~~~~~-----~-------------~~~~~~~~v~~~---~~~~~~l 61 (86)
T d1u8sa1 3 TQHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF-----G-------------KEFTLLMLISGS---PSNITRV 61 (86)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE-----T-------------TEEEEEEEEEEC---HHHHHHH
T ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEEE-----C-------------CEEEEEEEEECC---CCCHHHH
T ss_conf 648999999389871999999999987976999674997-----8-------------915999999868---5019999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780662|r 165 KKQLIFIIEQ 174 (1576)
Q Consensus 165 ~~~L~~VL~d 174 (1576)
++.|...-++
T Consensus 62 ~~~L~~l~~~ 71 (86)
T d1u8sa1 62 ETTLPLLGQQ 71 (86)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999998887
No 17
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=60.36 E-value=2.9 Score=15.47 Aligned_cols=35 Identities=11% Similarity=-0.036 Sum_probs=29.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCEE
Q ss_conf 99994787743899999999977991279984648
Q gi|254780662|r 89 IITVIVDNIPFLYQSIIGEIVARCRNLTMAVHPVF 123 (1576)
Q Consensus 89 vi~iv~dD~PfLvDSv~~~l~~~~~~i~~~~HPvl 123 (1576)
-|.|..+|.|=||-.|+..|..+|.+|..+..-+.
T Consensus 8 ~v~v~g~DrpGIV~~it~~la~~~~nI~~l~t~~~ 42 (93)
T d1u8sa2 8 EVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTI 42 (93)
T ss_dssp EEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCC
T ss_conf 99999799899899999999986998053321232
No 18
>d2bnma1 a.35.1.3 (A:6-76) Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain {Streptomyces wedmorensis [TaxId: 43759]}
Probab=55.38 E-value=1.4 Score=18.44 Aligned_cols=19 Identities=47% Similarity=0.672 Sum_probs=14.5
Q ss_pred EECCCCCCCHHHHHHHHHC
Q ss_conf 8555103076789999973
Q gi|254780662|r 1108 GEGANLGLTQQARVVYSLN 1126 (1576)
Q Consensus 1108 ~EG~NLg~Tq~~Rie~a~~ 1126 (1576)
||||.|-+||.|||.-++.
T Consensus 41 geggeltltqlg~ia~~lg 59 (71)
T d2bnma1 41 GEGGELTLTQLGRIAHVLG 59 (71)
T ss_dssp TTCTTCBHHHHHHHHHHTT
T ss_pred CCCCEEEHHHHHHHHHHHC
T ss_conf 8875052999888999971
No 19
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]}
Probab=52.89 E-value=2.7 Score=15.83 Aligned_cols=93 Identities=17% Similarity=0.214 Sum_probs=40.6
Q ss_pred CCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCC---
Q ss_conf 62089997394368677788137989999999668987003897871789708982144421798999870988554---
Q gi|254780662|r 974 KIQLVAAFDHSDIFIDPDPNSETTFDERKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQI--- 1050 (1576)
Q Consensus 974 ~i~lvaafdh~hif~DP~PD~~~s~~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~--- 1050 (1576)
.+.+|--|--.+ |-..+-.-...||..| - |-.. + +| +..-.+--|.--|..--+...|
T Consensus 524 ~l~VvPLFETi~-------DL~~a~~il~~Ll~~p--~---yr~~-l--~~----~QeVMlGYSDS~KDgG~laa~W~ly 584 (936)
T d1jqoa_ 524 PLPVVPLFERLA-------DLQSAPASVERLFSVD--W---YMDR-I--KG----KQQVMVGYSDSGKDAGRLSAAWQLY 584 (936)
T ss_dssp CCCEEEEECSHH-------HHHTHHHHHHHHHTCH--H---HHHH-H--TS----EEEEEEESTTHHHHSCHHHHHHHHH
T ss_pred CCCCCCCCCCHH-------HHHHHHHHHHHHHHCH--H---HHHH-H--CC----CEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 877363033499-------9984299999998382--8---8874-3--10----4277753555542257888888999
Q ss_pred CCHHHHHHHHCCCCCEEECC-CCCCCEECCCCCCCC
Q ss_conf 28889998630365304433-874211126898620
Q gi|254780662|r 1051 ATPSEIISAILMASVDLLWF-GGIGTYIRAPRENNA 1085 (1576)
Q Consensus 1051 ~~p~eli~~iL~a~vDLlw~-gGiGTYvka~~e~~~ 1085 (1576)
..-..|....=+..|.|.+| |--||-=+.+|-+|.
T Consensus 585 ~Aq~~L~~v~~~~gv~l~~FHGRGGsvgRGGGPt~~ 620 (936)
T d1jqoa_ 585 RAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHL 620 (936)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHH
T ss_conf 999999999998396389970678865567897688
No 20
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia coli [TaxId: 562]}
Probab=51.97 E-value=3.8 Score=14.41 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 878999999985007899999999750065179999999999984898824
Q gi|254780662|r 1174 SMTSEVVELVLRNNYLQSLAISLESRKGMAMMWNFAQLMKFLGKEGALDRE 1224 (1576)
Q Consensus 1174 ~mtdeV~~lVL~~n~~Q~~~ls~~~~~~~~~~~~~~rli~~Le~~g~Ldr~ 1224 (1576)
.|.+++.++|...+.. .+|+.+++=.---+..+|+|+.||+.|.....
T Consensus 7 ~ly~~a~~~V~~~~ka---S~S~lQR~l~IGYnRAariid~LE~~GiVsp~ 54 (69)
T d2j5pa1 7 PLFDQAVQFVTEKRKA---SISGVQRQFRIGYNRAARIIEQMEAQGIVSEQ 54 (69)
T ss_dssp TTHHHHHHHHHHTTEE---EHHHHHHHHTCCHHHHHHHHHHHHHHTSBCCC
T ss_pred HHHHHHHHHHHHHCCC---CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 8999999999980864---48999999712522999999999988768877
No 21
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}
Probab=51.76 E-value=3.9 Score=14.39 Aligned_cols=93 Identities=15% Similarity=0.211 Sum_probs=53.3
Q ss_pred EEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECC
Q ss_conf 45996058863324431112766208999739436867778813798999999966898700389787178970898214
Q gi|254780662|r 952 FTVAGVGDMSGDVFGNGMLLSRKIQLVAAFDHSDIFIDPDPNSETTFDERKRLFDSPSSSWQDFDRKVLSKGGMIISRKE 1031 (1576)
Q Consensus 952 fTvvgiGdmsGDVfGNgmLls~~i~lvaafdh~hif~DP~PD~~~s~~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~ 1031 (1576)
+-++|.|.|+...+-+.+..+++..++|.+ ||+|+.+..+.+ -|.. .+.++-..++..--.|+
T Consensus 4 i~iIG~G~~g~~~~~~~l~~~~~~~i~~v~-------d~~~~~~~~~~~---~~~~---~~~~~~~~l~~~~D~V~---- 66 (164)
T d1tlta1 4 IGVVGLGGIAQKAWLPVLAAASDWTLQGAW-------SPTRAKALPICE---SWRI---PYADSLSSLAASCDAVF---- 66 (164)
T ss_dssp EEEECCSTHHHHTHHHHHHSCSSEEEEEEE-------CSSCTTHHHHHH---HHTC---CBCSSHHHHHTTCSEEE----
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEEE-------ECHHHHHHHHHH---CCCC---CCCCCCHHHHHHCCCCC----
T ss_conf 999959899999999999858996899999-------330676666542---0233---43553022222012112----
Q ss_pred CCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCC
Q ss_conf 44217989998709885542888999863036530443387421
Q gi|254780662|r 1032 KAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGT 1075 (1576)
Q Consensus 1032 k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGT 1075 (1576)
|-.++ -+-.+++...|++..++|.--.+++
T Consensus 67 --I~tp~------------~~h~~~~~~al~~gk~V~~EKPla~ 96 (164)
T d1tlta1 67 --VHSST------------ASHFDVVSTLLNAGVHVCVDKPLAE 96 (164)
T ss_dssp --ECSCT------------THHHHHHHHHHHTTCEEEEESSSCS
T ss_pred --CCCCC------------HHCCCCCCCCCCCCCEEECCCCCCC
T ss_conf --34311------------0001233112232200120435568
No 22
>d1fiua_ c.52.1.10 (A:) Restriction endonuclease NgoIV {Neisseria gonorrhoeae [TaxId: 485]}
Probab=47.76 E-value=4.3 Score=13.96 Aligned_cols=88 Identities=20% Similarity=0.242 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHH-HCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCC
Q ss_conf 99999998988776-25688840288310305389867998177888326899999998808998501105699998843
Q gi|254780662|r 845 EAYKTYVRALLSIT-DNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTATFSDTANILAQEAKFWLDDAFASGGSMGYDHK 923 (1576)
Q Consensus 845 ~~y~~fi~~lLdit-DN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~fsD~An~ia~~~gfwlgdAFaSGgs~GydHK 923 (1576)
+.-+.|-+-||+-. --+.+-.+ +--||++--+=-.+|++|+..- |+--|.-|
T Consensus 7 e~Rk~fH~~Lle~~il~~n~~gv----------------~snAD~sn~~S~~iA~~ia~~l-----------~a~Tv~~r 59 (286)
T d1fiua_ 7 QERRIFHKKLLDGNILATNNRGV----------------VSNADGSNTRSFNIAKGIADLL-----------HSETVSER 59 (286)
T ss_dssp HHHHHHHHHHHHTTSSCBCTTSC----------------BTTSCTTCHHHHHHHHHHHHHT-----------TCCCBCCC
T ss_pred HHHHHHHHHHHHCCEEEECCCCC----------------CCCCCCCCCCCHHHHHHHHHHH-----------CCCHHHHH
T ss_conf 99999999986377378604664----------------2346666744799999999986-----------55226444
Q ss_pred CCCCCHHHHHHH-----HHHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf 101146789999-----9999998089965486459960588
Q gi|254780662|r 924 KMGITARGAWET-----VKRHFREMDIDIQSTPFTVAGVGDM 960 (1576)
Q Consensus 924 ~mGITarGaw~~-----v~rhfrelg~D~q~~~fTvvgiGdm 960 (1576)
.-|-|+-+.+|. ++..|-+|.+ ..--+.-|..+|.-
T Consensus 60 ~aGQt~G~~FE~~~~~Fi~~tf~~l~h-lRPG~W~V~qv~~r 100 (286)
T d1fiua_ 60 LPGQTSGNAFEAICSEFVQSAFEKLQH-IRPGDWNVKQVGSR 100 (286)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHGGGTT-TSCSCEEEEECCTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCEEEECCCC
T ss_conf 035500577999999999999998615-78887436652776
No 23
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=46.97 E-value=4.5 Score=13.82 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 9989999999999999988188889899999997-1479999999999875
Q gi|254780662|r 635 DLRVYEISVLRSYARYLRQASVTWSQNFIARVLS-KNPTISQLLFSLFRYR 684 (1576)
Q Consensus 635 ~l~~r~v~~lra~~~yl~Q~~~~~s~~~i~~~l~-~~p~~~~~l~~~F~~r 684 (1576)
+|+-||-.+|....+|..+-|.+-|..-|.+.+- +.|..++..+.-.+.+
T Consensus 2 ~LT~rQ~~vL~~I~~~~~~~G~~Ps~rei~~~~g~~S~stv~~~l~~Le~k 52 (71)
T d1jhfa1 2 ALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARK 52 (71)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCCCHHHHHHHTTCSSHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHC
T ss_conf 879999999999999999828898899999772999999999999999997
No 24
>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]}
Probab=45.36 E-value=3.1 Score=15.28 Aligned_cols=33 Identities=30% Similarity=0.308 Sum_probs=19.1
Q ss_pred CHHHHHHHHHCCCHHHHHCCCH-----HHHHHHHHHHH
Q ss_conf 8799999872289488605898-----99999999997
Q gi|254780662|r 353 SSRMLQNTLEFYPRDELFQIDS-----TLLASFCEQII 385 (1576)
Q Consensus 353 sgK~L~~ILEtyPRDELFQ~s~-----eeL~~~a~gIL 385 (1576)
+.+.|...|..++-++++.+-. -.|..+|...-
T Consensus 49 ~~~~l~~~l~~L~~~~~~~v~RaFs~~f~L~NiAE~~~ 86 (880)
T d1jqna_ 49 NRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYH 86 (880)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 19999999977998999999999999999999999999
No 25
>d2qkwa1 a.8.8.1 (A:29-129) Avirulence protein AvrPto {Pseudomonas syringae [TaxId: 317]}
Probab=41.44 E-value=5.3 Score=13.16 Aligned_cols=18 Identities=17% Similarity=0.337 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999977999999999
Q gi|254780662|r 173 EQLKLVSQDSREMLASLE 190 (1576)
Q Consensus 173 ~dVr~aV~Dw~aM~~rl~ 190 (1576)
.|.+-+..||..|++.++
T Consensus 79 ddmrsai~dwsdmrealq 96 (101)
T d2qkwa1 79 DDMRSAITDWSDMREALQ 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 889998601899999999
No 26
>d2ve8a1 a.4.5.67 (A:745-811) DNA translocase FtsK {Pseudomonas aeruginosa [TaxId: 287]}
Probab=40.44 E-value=5.5 Score=13.04 Aligned_cols=48 Identities=19% Similarity=0.160 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 878999999985007899999999750065179999999999984898824
Q gi|254780662|r 1174 SMTSEVVELVLRNNYLQSLAISLESRKGMAMMWNFAQLMKFLGKEGALDRE 1224 (1576)
Q Consensus 1174 ~mtdeV~~lVL~~n~~Q~~~ls~~~~~~~~~~~~~~rli~~Le~~g~Ldr~ 1224 (1576)
.|-+++.++|...+.. .+|..+++=.--.+..+|+|+.||+.|.....
T Consensus 4 ~ly~~a~~~V~~~~ka---S~S~lQR~l~IGYnRAariid~LE~~GiVsp~ 51 (67)
T d2ve8a1 4 PLYDEAVRFVTESRRA---SISAVQRKLKIGYNRAARMIEAMEMAGVVTPM 51 (67)
T ss_dssp TTHHHHHHHHHHHCCC---CHHHHHHHHTCCHHHHHHHHHHHHHTTSBCCC
T ss_pred HHHHHHHHHHHHHCCC---CHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 7999999999980863---48999999711507999999999987598887
No 27
>d1vqza2 d.104.1.3 (A:1-241) LplA-like protein SP1160, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=37.04 E-value=6.1 Score=12.64 Aligned_cols=114 Identities=15% Similarity=0.170 Sum_probs=68.5
Q ss_pred CCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCC--CC-----------CCCCCCCCHHHHHHHHH
Q ss_conf 103053898679981778883268999999988089985011056999--98-----------84310114678999999
Q gi|254780662|r 871 NTVCLDGNDPYFVVAADKGTATFSDTANILAQEAKFWLDDAFASGGSM--GY-----------DHKKMGITARGAWETVK 937 (1576)
Q Consensus 871 ~vv~~d~~d~ylvvaaDkgTa~fsD~An~ia~~~gfwlgdAFaSGgs~--Gy-----------dHK~mGITarGaw~~v~ 937 (1576)
.+.+.+..+|.+++|.-.......|+. ..++.|.-+=.-+.-||.+ |- +|.. ...-+-..+.+.
T Consensus 30 ~~l~~~~~~p~v~iG~~q~~~~e~~~~--~~~~~gi~vvRR~tGGgaV~h~~g~~~~s~i~~~~~~~-~~~~~~~~~~i~ 106 (241)
T d1vqza2 30 QIFLLWINKPSIIVGRHQNTIEEINRD--YVRENGIEVVRRISGGGAVYHDLNNLNYTIISKEDENK-AFDFKSFSTPVI 106 (241)
T ss_dssp EEEEEECCSSEEEECTTCCGGGTBCHH--HHHHHTCEEEECSSCSCCEEECTTEEEEEEEEECCTTC-CCSHHHHHHHHH
T ss_pred CEEEEECCCCEEEECCCCCHHHHHCHH--HHHHCCCEEEEECCCCCEEEECCCCEEEEEEECCCCCH-HHHHHHHHHHHH
T ss_conf 889997089989989889803666899--99877984999738986389779974899996376543-778999999999
Q ss_pred HHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCEEEECCCCC
Q ss_conf 99998089965486459960588633244311127662089997394368677788
Q gi|254780662|r 938 RHFREMDIDIQSTPFTVAGVGDMSGDVFGNGMLLSRKIQLVAAFDHSDIFIDPDPN 993 (1576)
Q Consensus 938 rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgmLls~~i~lvaafdh~hif~DP~PD 993 (1576)
+.|+++|++....+-.-+-+++ -.+.||++..+++. .+-|--+.+|||++
T Consensus 107 ~al~~~g~~a~~~~~~d~~v~g--~Ki~G~aq~~~~~~----~l~hgsll~~~d~~ 156 (241)
T d1vqza2 107 NTLAQLGVKAEFTGRNDLEIDG--KKFCGNAQAYINGR----IMHHGCLLFDVDLS 156 (241)
T ss_dssp HHHHHTTCCEEEETTTEEEETT--EEEEEEEEEEETTE----EEEEEEEESSCCTT
T ss_pred HHHHHHCCCEEEECCCCEEECC--EEEEEEEEEEECCE----EEEEEEEEECCCHH
T ss_conf 9999844660882258779878--78766789986883----99998987159999
No 28
>d3cdda2 b.106.1.1 (A:2-180) Baseplate protein gpP {Shewanella oneidensis [TaxId: 70863]}
Probab=36.87 E-value=6.1 Score=12.62 Aligned_cols=53 Identities=13% Similarity=0.229 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCC
Q ss_conf 32689999999880899850110569999884310114-6789999999999808996
Q gi|254780662|r 891 ATFSDTANILAQEAKFWLDDAFASGGSMGYDHKKMGIT-ARGAWETVKRHFREMDIDI 947 (1576)
Q Consensus 891 a~fsD~An~ia~~~gfwlgdAFaSGgs~GydHK~mGIT-arGaw~~v~rhfrelg~D~ 947 (1576)
-|.+|++..++++||+- +-.. .+.++....|=|- .-..|.++.|..++-|+-.
T Consensus 114 ~t~~~I~~~i~~~~G~~---~~~~-~~~~~~~~~~~~q~~Esd~~fl~Rla~~~G~~~ 167 (179)
T d3cdda2 114 QTLTQIADIVCKPFGIK---VIVN-TDVGEPFQRIQIEQGETPHELLARLAKQRGVLL 167 (179)
T ss_dssp ECHHHHHHHHHGGGTCC---EEEC-SCCCSCEEEEECCTTCCHHHHHHHHHHTTTCEE
T ss_pred CCHHHHHHHHHHHCCCE---EEEE-CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEE
T ss_conf 77999999998764960---5774-145667560685169849999999999889799
No 29
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=35.21 E-value=6.5 Score=12.42 Aligned_cols=61 Identities=11% Similarity=-0.006 Sum_probs=44.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEECCCCCCCCCCEEEEEEEECCCCH-HHHHHHHH
Q ss_conf 79999478774389999999997799127998464899988997374236778876633699999579998-99999999
Q gi|254780662|r 88 SIITVIVDNIPFLYQSIIGEIVARCRNLTMAVHPVFTKDKNCDWQLYSPESCGIAQKQISLIQIHCLKITP-EEAIEIKK 166 (1576)
Q Consensus 88 tvi~iv~dD~PfLvDSv~~~l~~~~~~i~~~~HPvl~V~RD~~G~L~~v~~~~~~~~~ES~I~Ieidr~~~-e~~~~L~~ 166 (1576)
+.+.+.+.|.|=.+-.|...|.++|+.|..+ .+.|...| ..+.+.+++|...+ +-.++|++
T Consensus 4 ~~L~i~~~D~PGvi~~I~~~l~~~~iNI~~m-----~~~~~~~g-------------~~a~~vi~vD~~~~~~vl~~I~~ 65 (78)
T d1ygya3 4 INLIIHYVDRPGALGKIGTLLGTAGVNIQAA-----QLSEDAEG-------------PGATILLRLDQDVPDDVRTAIAA 65 (78)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEE-----EEEECSSS-------------SCEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHCCCCHHHH-----EEEECCCC-------------CEEEEEEECCCCCCHHHHHHHHC
T ss_conf 6999996796997999999998649693241-----33005789-------------76899999377766999999972
No 30
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}
Probab=33.84 E-value=3.3 Score=14.99 Aligned_cols=48 Identities=8% Similarity=0.169 Sum_probs=31.6
Q ss_pred CEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHCC
Q ss_conf 6459960588633244311127662089997394368677788137989999999668
Q gi|254780662|r 951 PFTVAGVGDMSGDVFGNGMLLSRKIQLVAAFDHSDIFIDPDPNSETTFDERKRLFDSP 1008 (1576)
Q Consensus 951 ~fTvvgiGdmsGDVfGNgmLls~~i~lvaafdh~hif~DP~PD~~~s~~Er~RLf~lp 1008 (1576)
.+-++|+|.|+-..+-..+..+++++++|.+ |++|+-+..+ .+.|..+
T Consensus 35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~-------d~~~~~a~~~---~~~~~i~ 82 (221)
T d1h6da1 35 GYAIVGLGKYALNQILPGFAGCQHSRIEALV-------SGNAEKAKIV---AAEYGVD 82 (221)
T ss_dssp EEEEECCSHHHHHTHHHHTTTCSSEEEEEEE-------CSCHHHHHHH---HHHTTCC
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCEEEEEE-------CCCHHHHHHH---HHHHCCC
T ss_conf 8999918399999999999738996699996-------2888999999---9863013
No 31
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.93 E-value=7.2 Score=12.01 Aligned_cols=20 Identities=10% Similarity=0.150 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999997522287305
Q gi|254780662|r 720 VLRSYVNLISGTLRTNYFQK 739 (1576)
Q Consensus 720 ilr~~~~~i~atlRTN~y~~ 739 (1576)
+...-.+++.-.+||+....
T Consensus 24 l~q~AW~~lNDs~rT~lcL~ 43 (110)
T d2i53a2 24 LVQMAWTFVNDSLCTTLSLQ 43 (110)
T ss_dssp HHHHHHHHHHHHTTTTGGGT
T ss_pred HHHHHHHHHHHHHCCCCHHC
T ss_conf 99999999999965874443
No 32
>d1ozba_ d.33.1.1 (A:) Bacterial protein-export protein SecB {Haemophilus influenzae [TaxId: 727]}
Probab=31.19 E-value=7.4 Score=11.91 Aligned_cols=42 Identities=24% Similarity=0.222 Sum_probs=30.8
Q ss_pred EEEEEEEEEEECHHHHC-----------CCHHHCCHHHHHHHHHHHHCCCCCC
Q ss_conf 87787885210047626-----------8855462089999999997488988
Q gi|254780662|r 309 LIGELHVVGFFTRLVYS-----------QRASKIPLLREKIVKVQNLLNFHPN 350 (1576)
Q Consensus 309 viGE~RFlGLFTSsAY~-----------~sv~~IPiLRrKV~~VL~~sGf~p~ 350 (1576)
.+-|.-..|+|+-.... .+..=-|.+|+-+..+..++||+|=
T Consensus 68 F~~e~~yagif~i~~~~~~~~~~illi~~P~~lFP~~R~ii~~l~~~gGFppl 120 (144)
T d1ozba_ 68 FICEVKQAGVFTISGLEDVQMAHCLTSQCPNMLFPYARELVSNLVNRGTFPAL 120 (144)
T ss_dssp EEEEEEEEEEEEEESCCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred EEEEEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89987589999954898788635674067288888999999999984699984
No 33
>d1i7na1 c.30.1.5 (A:113-214) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.06 E-value=6.6 Score=12.33 Aligned_cols=16 Identities=31% Similarity=0.540 Sum_probs=8.7
Q ss_pred CCHHHHHHHHHHHHHH
Q ss_conf 8857888889998998
Q gi|254780662|r 793 DRAADYRTEVLGLVRA 808 (1576)
Q Consensus 793 dR~edfrtEvlgL~ka 808 (1576)
+..+|||..++||.++
T Consensus 82 ~~~~D~Rnl~iGL~yg 97 (102)
T d1i7na1 82 AENEDFRHLVIGMQYA 97 (102)
T ss_dssp STTCCCHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHC
T ss_conf 4464478887664306
No 34
>d1wrua2 b.106.1.1 (A:3-176) Baseplate protein gpP {Bacteriophage mu [TaxId: 10677]}
Probab=30.86 E-value=7.3 Score=11.95 Aligned_cols=57 Identities=12% Similarity=0.036 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCC
Q ss_conf 32689999999880899850110569999884310114-67899999999998089965
Q gi|254780662|r 891 ATFSDTANILAQEAKFWLDDAFASGGSMGYDHKKMGIT-ARGAWETVKRHFREMDIDIQ 948 (1576)
Q Consensus 891 a~fsD~An~ia~~~gfwlgdAFaSGgs~GydHK~mGIT-arGaw~~v~rhfrelg~D~q 948 (1576)
.|.+|++..++.++|+-... +.+-.+.+|....|=|- ....|.++.|..++.|+-..
T Consensus 106 ~t~~~Iv~~i~~~~Gl~~~~-~~~~~~~~~~~~~~~~q~~ESd~~fl~RLa~~~G~~~~ 163 (174)
T d1wrua2 106 RTLEQIARDLCAPYGVTVRW-ELSDKESSAAFPGFTLDHSETVYEALVRASRARGVLMT 163 (174)
T ss_dssp ECHHHHHHHHHGGGTCCEEE-CCCCHHHHCCEEEEECCTTCBHHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHCCCCCEE-ECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
T ss_conf 77999999999875675102-00233457873014532597599999999997898999
No 35
>d1qyna_ d.33.1.1 (A:) Bacterial protein-export protein SecB {Escherichia coli [TaxId: 562]}
Probab=30.70 E-value=7.5 Score=11.85 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=29.6
Q ss_pred CCCCEEEEEEEEEEECHHHHC-----------CCHHHCCHHHHHHHHHHHHCCCCCC
Q ss_conf 999887787885210047626-----------8855462089999999997488988
Q gi|254780662|r 305 ERGNLIGELHVVGFFTRLVYS-----------QRASKIPLLREKIVKVQNLLNFHPN 350 (1576)
Q Consensus 305 a~G~viGE~RFlGLFTSsAY~-----------~sv~~IPiLRrKV~~VL~~sGf~p~ 350 (1576)
.+-...-|....|+|+-.-.. .+..=-|.+|+-+..+..++||+|=
T Consensus 62 ~~~~f~~Ev~yagvf~i~~~~~~~~~~il~i~~P~~lfP~~R~ii~~l~~~gGfppl 118 (134)
T d1qyna_ 62 EETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYCPNILFPYARECITSMVSRGTFPQL 118 (134)
T ss_dssp TEEEEEEEEEEEEEEEEESCCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCEEEEEEEEEEEEEEEECCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 851468999999999995066144200022157388878999999999984699985
No 36
>d1uoua3 d.41.3.1 (A:374-480) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.07 E-value=7.6 Score=11.77 Aligned_cols=24 Identities=8% Similarity=0.095 Sum_probs=11.5
Q ss_pred CEEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 7079999747987669898888985
Q gi|254780662|r 538 GKVQIKIFHARGPFSLSKRVPLLEN 562 (1576)
Q Consensus 538 ~~~~lk~~~~~~~~~Ls~~~p~l~~ 562 (1576)
|+.=+++|+..+ -.+......|++
T Consensus 59 G~~l~~ih~~~~-~~~~~a~~~l~~ 82 (105)
T d1uoua3 59 GTPWLRVHRDGP-ALSGPQSRALQE 82 (105)
T ss_dssp TCEEEEEEESSS-SCCHHHHHHHHH
T ss_pred CCEEEEEECCCH-HHHHHHHHHHHH
T ss_conf 993999988987-899999999984
No 37
>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}
Probab=28.43 E-value=8.1 Score=11.55 Aligned_cols=32 Identities=13% Similarity=0.242 Sum_probs=26.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 99998843101146789999999999808996
Q gi|254780662|r 916 GSMGYDHKKMGITARGAWETVKRHFREMDIDI 947 (1576)
Q Consensus 916 gs~GydHK~mGITarGaw~~v~rhfrelg~D~ 947 (1576)
|..|++|=.+-++....++..+.+++++|+.+
T Consensus 74 ~~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~ 105 (144)
T d1zswa1 74 GTNAITRIGLLVPSEDSLHYWKERFEKFDVKH 105 (144)
T ss_dssp CBSEEEEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHCCCEEE
T ss_conf 78960189986078113899863210164566
No 38
>d2c8ma1 d.104.1.3 (A:1-256) Lipoate-protein ligase A {Thermoplasma acidophilum [TaxId: 2303]}
Probab=27.15 E-value=8.4 Score=11.38 Aligned_cols=138 Identities=15% Similarity=0.225 Sum_probs=75.8
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCC--CC---------
Q ss_conf 8988776256888402883103053898679981778883268999999988089985011056999--98---------
Q gi|254780662|r 852 RALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTATFSDTANILAQEAKFWLDDAFASGGSM--GY--------- 920 (1576)
Q Consensus 852 ~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~fsD~An~ia~~~gfwlgdAFaSGgs~--Gy--------- 920 (1576)
.+||.-. ..|. .| +++.+..+|-+++|---.-....|+. ..++.|+-+=.-+.-||.+ |-
T Consensus 22 e~Ll~~~---~~~~--~p--~lr~~~~~p~v~iG~~q~~~~ev~~~--~~~~~gi~vvRR~tGGgaV~hd~g~l~~s~i~ 92 (256)
T d2c8ma1 22 EAIYRSF---QYGD--KP--ILRFYRHDRSVIIGYFQVAEEEVDLD--YMKKNGIMLARRYTGGGAVYHDLGDLNFSVVR 92 (256)
T ss_dssp HHHHHHC---CTTS--CC--EEEEECCSSEEEECTTCCHHHHSCHH--HHHHTTCEEEECSSCSCCEEECTTEEEEEEEE
T ss_pred HHHHHHC---CCCC--CC--EEEEECCCCEEEECCCCCHHHHHCHH--HHHHCCCCEEEEECCCCEEEECCCCEEEEEEE
T ss_conf 9999734---3799--97--89997589969988889801441989--99867995899706986289789984999997
Q ss_pred CCCCCCC--CHHHHHHHHHHHHHHCCCCCCCCCEEEE-----EECC---CCCCCCCCHHHCCCCCEEEEEECCCEEEECC
Q ss_conf 8431011--4678999999999980899654864599-----6058---8633244311127662089997394368677
Q gi|254780662|r 921 DHKKMGI--TARGAWETVKRHFREMDIDIQSTPFTVA-----GVGD---MSGDVFGNGMLLSRKIQLVAAFDHSDIFIDP 990 (1576)
Q Consensus 921 dHK~mGI--TarGaw~~v~rhfrelg~D~q~~~fTvv-----giGd---msGDVfGNgmLls~~i~lvaafdh~hif~DP 990 (1576)
+.+...+ .-+-..+.+...++++|++....+.+-+ +.+| -..-+.||++..+++ +.+-|--+.+|+
T Consensus 93 ~~~~~~~~~~y~~~~~~i~~~l~~lGi~a~~~~~~~~~~~~~~~~di~~~~~Ki~G~a~~~~~~----~~l~hgtll~~~ 168 (256)
T d2c8ma1 93 SSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKG----AKLWHAAMLVHT 168 (256)
T ss_dssp ECSSCCHHHHHHHHHHHHHHHHHHTTCCCEECCBCCTTSSSSBTTSEEETTEEEEEEEEEEETT----EEEEEEEEESSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCCCC----EEEEEEEEECCC
T ss_conf 1589999999999999999987652803788685870898204776545543340322221351----799986740379
Q ss_pred CCCCCCCHHHHHHHHHCC
Q ss_conf 788137989999999668
Q gi|254780662|r 991 DPNSETTFDERKRLFDSP 1008 (1576)
Q Consensus 991 ~PD~~~s~~Er~RLf~lp 1008 (1576)
|+ ....+.+..|
T Consensus 169 d~------~~l~~~L~~~ 180 (256)
T d2c8ma1 169 DL------DMLSAVLKVP 180 (256)
T ss_dssp CH------HHHHHHTC--
T ss_pred CH------HHHHHHHCCC
T ss_conf 99------9999875889
No 39
>d1p99a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Staphylococcus aureus [TaxId: 1280]}
Probab=26.73 E-value=8.6 Score=11.32 Aligned_cols=23 Identities=39% Similarity=0.679 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 89999999999808996548645
Q gi|254780662|r 931 GAWETVKRHFREMDIDIQSTPFT 953 (1576)
Q Consensus 931 Gaw~~v~rhfrelg~D~q~~~fT 953 (1576)
-+|++++..|.+-|+|++-..|+
T Consensus 12 ~~~~~~~~~~~k~Gl~Ve~~~f~ 34 (255)
T d1p99a_ 12 KAWEKVKELAKKDDIDVEIKHFS 34 (255)
T ss_dssp HHHHHHHHHHGGGTCCEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
T ss_conf 99999999999749879999707
No 40
>d2bsza1 d.3.1.5 (A:6-275) Arylamine N-acetyltransferase {Rhizobium loti [TaxId: 381]}
Probab=26.51 E-value=8.6 Score=11.29 Aligned_cols=32 Identities=9% Similarity=0.011 Sum_probs=19.5
Q ss_pred EEECCCCCCCCCCCCEEEEEEECCCCCHHHHH
Q ss_conf 87247655589988657999947877438999
Q gi|254780662|r 72 IDIREVEGINPSGISISIITVIVDNIPFLYQS 103 (1576)
Q Consensus 72 ~v~~p~~~~~gw~s~~tvi~iv~dD~PfLvDS 103 (1576)
+|+.+.........+|-++-|..++.+||||-
T Consensus 92 rV~~~~~~~~~~~~~H~~l~V~i~g~~ylvDv 123 (270)
T d2bsza1 92 RVLWGQSEDAITARSHMLLRVELDGRTYIADV 123 (270)
T ss_dssp EECSSCCSSSSCCCCEEEEEEEETTEEEEECS
T ss_pred EEECCCCCCCCCCCCCEEEEEEECCEEEEEEC
T ss_conf 99537888899999788999998995699841
No 41
>d3bwuc1 b.1.11.1 (C:1-121) Periplasmic chaperone FimC {Escherichia coli [TaxId: 562]}
Probab=24.69 E-value=6.4 Score=12.42 Aligned_cols=72 Identities=17% Similarity=0.161 Sum_probs=37.2
Q ss_pred CEEEEEEECC--CCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEE--CCCCCCCCCCEEEEEEEECCCC
Q ss_conf 6579999478--7743899999999977991279984648999889973742--3677887663369999957999
Q gi|254780662|r 86 SISIITVIVD--NIPFLYQSIIGEIVARCRNLTMAVHPVFTKDKNCDWQLYS--PESCGIAQKQISLIQIHCLKIT 157 (1576)
Q Consensus 86 ~~tvi~iv~d--D~PfLvDSv~~~l~~~~~~i~~~~HPvl~V~RD~~G~L~~--v~~~~~~~~~ES~I~Ieidr~~ 157 (1576)
....+.+.|. +.|+||.|-.-......-....+.-|++.++-++...+.= .........+||+.++-+..+.
T Consensus 16 ~~~~~~i~N~~~~~~~lvq~wv~~~d~~~~~~fivtPPl~rl~p~~~q~vRI~~~~~~~lp~drEslf~l~i~~IP 91 (121)
T d3bwuc1 16 KQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIP 91 (121)
T ss_dssp SEEEEEEEECCTTCEEEEEEEEEETTSCCCSSEEEESSEEEEESSEEEEEEEEECSTTCSCSSSCEEEEEEEEEEE
T ss_pred CEEEEEEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCEEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECC
T ss_conf 6389999979999518999998768987678715879718738998048999966889999870799999989848
No 42
>d1p5va1 b.1.11.1 (A:7-147) Chaperone protein Caf1m {Yersinia pestis [TaxId: 632]}
Probab=24.38 E-value=9.3 Score=10.99 Aligned_cols=74 Identities=18% Similarity=0.149 Sum_probs=39.0
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHH-HCCCCEEEEEC-CEEEEEECCCCCEEECCC--CCCCCCCEEEEEEEECCCCHH
Q ss_conf 8657999947877438999999999-77991279984-648999889973742367--788766336999995799989
Q gi|254780662|r 85 ISISIITVIVDNIPFLYQSIIGEIV-ARCRNLTMAVH-PVFTKDKNCDWQLYSPES--CGIAQKQISLIQIHCLKITPE 159 (1576)
Q Consensus 85 s~~tvi~iv~dD~PfLvDSv~~~l~-~~~~~i~~~~H-Pvl~V~RD~~G~L~~v~~--~~~~~~~ES~I~Ieidr~~~e 159 (1576)
...++--..+.|.|+||.|-.-.-+ ...-...+++. |++.++-+. ...+.+.. ......+||+.++-+..+.+.
T Consensus 22 ~~~s~~v~N~~~~p~lvQ~wv~~~~~~~~~~~pfivtPPl~rl~p~~-~~~lRI~~~~~~lP~DrEslf~l~i~~IP~~ 99 (141)
T d1p5va1 22 AGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQ-QNSLRIAQAGGVFPRDKESLKWLCVKGIPPK 99 (141)
T ss_dssp SCEEEEEEECSSSCEEEEEEECC---------CEEEESSEEEECTTC-EEEEEEEECSCCCCSSSCEEEEEEEEEEC--
T ss_pred CEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCEEEECCCC-CEEEEEEECCCCCCCCCEEEEEEEEEECCCC
T ss_conf 67899999089997999999976987767789848759858888998-0589998468889976369999999973898
No 43
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.56 E-value=9.6 Score=10.87 Aligned_cols=28 Identities=14% Similarity=0.175 Sum_probs=13.4
Q ss_pred HHCCCHHHCCHHHHHHHHHHHHCCCCCC
Q ss_conf 6268855462089999999997488988
Q gi|254780662|r 323 VYSQRASKIPLLREKIVKVQNLLNFHPN 350 (1576)
Q Consensus 323 AY~~sv~~IPiLRrKV~~VL~~sGf~p~ 350 (1576)
+.+.++.-=|-.|+||..+.+..||.|+
T Consensus 20 ~ln~~~~vs~~tr~rV~~~a~~lgY~pn 47 (57)
T d1qpza1 20 VINKTRFVAEETRNAVWAAIKELHYSPS 47 (57)
T ss_dssp HHHTCSCCCHHHHHHHHHHHHHHTCCCC
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 9779985689999999999999888979
No 44
>d1mkha_ b.40.4.4 (A:) C-terminal domain of methionyl-tRNA synthetase, MetRS-CD {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=23.44 E-value=9.7 Score=10.85 Aligned_cols=26 Identities=23% Similarity=0.305 Sum_probs=16.3
Q ss_pred CCCCCHHHCCCCCEEEEEECCCEEEECCCCCC
Q ss_conf 32443111276620899973943686777881
Q gi|254780662|r 963 DVFGNGMLLSRKIQLVAAFDHSDIFIDPDPNS 994 (1576)
Q Consensus 963 DVfGNgmLls~~i~lvaafdh~hif~DP~PD~ 994 (1576)
.|-+|||++|- ..+..-.++.|+++.
T Consensus 75 Gv~SeGMl~s~------~e~~~~~ll~~~~~~ 100 (107)
T d1mkha_ 75 GIGSQGMLLAA------DDGERVALLMPDKEV 100 (107)
T ss_dssp CCEECCCBCEE------ECSSCEEECCCSSCC
T ss_pred CCCCCEEEEEE------ECCCCEEEEECCCCC
T ss_conf 82578899974------269937999799998
No 45
>d2c4ba1 d.1.1.2 (A:3-110) Barnase {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=22.85 E-value=4.4 Score=13.93 Aligned_cols=55 Identities=27% Similarity=0.359 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-EEEEEECCCCCCCCCC--H
Q ss_conf 268999999988089985011056999988431011467899999999998089965486-4599605886332443--1
Q gi|254780662|r 892 TFSDTANILAQEAKFWLDDAFASGGSMGYDHKKMGITARGAWETVKRHFREMDIDIQSTP-FTVAGVGDMSGDVFGN--G 968 (1576)
Q Consensus 892 ~fsD~An~ia~~~gfwlgdAFaSGgs~GydHK~mGITarGaw~~v~rhfrelg~D~q~~~-fTvvgiGdmsGDVfGN--g 968 (1576)
||-+.|+-+-+- --|+|-|.+ |+--+++|-++.+-+ .-|.-=....||+||| |
T Consensus 4 ~~~~v~~yl~~~--~~LP~~yiT----------------------k~qA~~~GW~~~kgnl~~v~pgk~IGG~~F~NrE~ 59 (108)
T d2c4ba1 4 TFDGVADYLQTY--HKLPDNYIT----------------------KSEAQALGWVASKGNLADVAPGKSIGGDIFSNREG 59 (108)
T ss_dssp SHHHHHHHHHHH--SSCCTTEEC----------------------HHHHHHTTCCGGGTCHHHHSTTCEEEEEEECCTTC
T ss_pred CHHHHHHHHHHH--CCCCCCCCC----------------------HHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
T ss_conf 189999999996--739833116----------------------99999828887757630138875226664546847
Q ss_pred HH
Q ss_conf 11
Q gi|254780662|r 969 ML 970 (1576)
Q Consensus 969 mL 970 (1576)
.|
T Consensus 60 ~L 61 (108)
T d2c4ba1 60 KL 61 (108)
T ss_dssp CS
T ss_pred CC
T ss_conf 78
No 46
>d1s3si_ d.15.1.2 (I:) p47 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.61 E-value=9.4 Score=10.97 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=19.3
Q ss_pred CCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCEEEE
Q ss_conf 0899654864599605886332443111276620899973943686
Q gi|254780662|r 943 MDIDIQSTPFTVAGVGDMSGDVFGNGMLLSRKIQLVAAFDHSDIFI 988 (1576)
Q Consensus 943 lg~D~q~~~fTvvgiGdmsGDVfGNgmLls~~i~lvaafdh~hif~ 988 (1576)
+.+| ..+|.|.+.| .|+.-.|+++-|||.|-.-
T Consensus 11 ~~vd-~s~PtT~iQi------------RL~dG~R~v~rFN~~Htv~ 43 (50)
T d1s3si_ 11 ILIN-EAEPTTNIQI------------RLADGGRLVQKFNHSHRIS 43 (50)
T ss_dssp C---------------------------------------CCCCHH
T ss_pred CCCC-CCCCCEEEEE------------EECCCCEEEEECCCCCCHH
T ss_conf 2015-7798268999------------9479978889806866988
No 47
>d1x2ga2 d.104.1.3 (A:1-246) Two-domain LplA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.34 E-value=10 Score=10.69 Aligned_cols=116 Identities=14% Similarity=0.169 Sum_probs=71.2
Q ss_pred CCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCC----C-------CCCCCCCCCHHHHHHHHHHH
Q ss_conf 103053898679981778883268999999988089985011056999----9-------88431011467899999999
Q gi|254780662|r 871 NTVCLDGNDPYFVVAADKGTATFSDTANILAQEAKFWLDDAFASGGSM----G-------YDHKKMGITARGAWETVKRH 939 (1576)
Q Consensus 871 ~vv~~d~~d~ylvvaaDkgTa~fsD~An~ia~~~gfwlgdAFaSGgs~----G-------ydHK~mGITarGaw~~v~rh 939 (1576)
.+++.+..+|.+++|.--......|+ ...+++|+-+-.-+.-||.+ | ++++.+.. .=..+.+...
T Consensus 32 ~~l~~~~~~p~v~lG~~Q~~~~ev~~--~~~~~~gi~vvRR~tGGgaV~hd~g~~~~s~i~~~~~~~~--~~~~~~i~~~ 107 (246)
T d1x2ga2 32 RVLFLWRNADTVVIGRAQNPWKECNT--RRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDK--TISTSIVLNA 107 (246)
T ss_dssp EEEEEECCSSEEEECTTCCHHHHBCH--HHHHHHTCEEEECSSCCCCEEECTTEEEEEEEEETTTCCH--HHHHHHHHHH
T ss_pred CEEEEECCCCEEEECCCCCHHHHHCH--HHHHHCCCEEEEECCCCCEEEECCCCEEEEEEECCCHHHH--HHHHHHHHHH
T ss_conf 59999827998998998986676589--9998779829997688727996799989999755724619--9999999998
Q ss_pred HHHCCCCCCCCCEEEEEECCCC--CCCCCCHHHCCCCCEEEEEECCCEEEECCCCCC
Q ss_conf 9980899654864599605886--332443111276620899973943686777881
Q gi|254780662|r 940 FREMDIDIQSTPFTVAGVGDMS--GDVFGNGMLLSRKIQLVAAFDHSDIFIDPDPNS 994 (1576)
Q Consensus 940 frelg~D~q~~~fTvvgiGdms--GDVfGNgmLls~~i~lvaafdh~hif~DP~PD~ 994 (1576)
++.+|++....+.+-+-+.... --+.|+++...++ +.+-|--|.+|+|++.
T Consensus 108 l~~lgi~a~~~~~~~~~~~~~~~gkKi~G~aq~~~~~----~~l~hgsi~~~~d~~~ 160 (246)
T d1x2ga2 108 LNALGVSAEASGRNDLVVKTVEGDRKVSGSAYRETKD----RGFHHGTLLLNADLSR 160 (246)
T ss_dssp HHHTTCCEEEETTTEEEECCTTCCEEEEEEEEEECSS----EEEEEEEEESSCCSSG
T ss_pred HHHCCCCEEECCCCCEEEECCCCCEEEEEEEEEEECC----EEEEECEEEECCCHHH
T ss_conf 8861883366685543673146861797677999899----9999078865699789
No 48
>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.17 E-value=10 Score=10.66 Aligned_cols=75 Identities=16% Similarity=0.242 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHCCCCCCCHHC-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
Q ss_conf 832689999999880899850110-------5699998843101146789999999999808996548645996058863
Q gi|254780662|r 890 TATFSDTANILAQEAKFWLDDAFA-------SGGSMGYDHKKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSG 962 (1576)
Q Consensus 890 Ta~fsD~An~ia~~~gfwlgdAFa-------SGgs~GydHK~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsG 962 (1576)
|+++..++..++..+|+-.++-|+ +|.-.|.+....-+...|--..++..-. +++++ .|+.+||=..
T Consensus 105 S~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~--~~~~~----~~~~vGDs~~ 178 (217)
T d1nnla_ 105 SGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKE--KFHFK----KIIMIGDGAT 178 (217)
T ss_dssp EEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHH--HHCCS----CEEEEESSHH
T ss_pred CCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCCEEEEEEECCCHHHHHHHHHHH--CCCCC----CCEEEEECHH
T ss_conf 99935888888987099610036655322200000364222465242208999999986--34866----6389971786
Q ss_pred CCCCCHHHCCC
Q ss_conf 32443111276
Q gi|254780662|r 963 DVFGNGMLLSR 973 (1576)
Q Consensus 963 DVfGNgmLls~ 973 (1576)
|+ .|+..-
T Consensus 179 Di---~~~~~a 186 (217)
T d1nnla_ 179 DM---EACPPA 186 (217)
T ss_dssp HH---TTTTTS
T ss_pred HH---HHHHHC
T ss_conf 59---989868
No 49
>d1f2ri_ d.15.2.1 (I:) Inhibitor of caspase-activated DNase (ICAD), DFF45, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.83 E-value=10 Score=10.61 Aligned_cols=58 Identities=24% Similarity=0.232 Sum_probs=39.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC----CCCCCCCCHHHCCCCCEEEEEECC
Q ss_conf 3101146789999999999808996548645996058----863324431112766208999739
Q gi|254780662|r 923 KKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGD----MSGDVFGNGMLLSRKIQLVAAFDH 983 (1576)
Q Consensus 923 K~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGd----msGDVfGNgmLls~~i~lvaafdh 983 (1576)
+++||+|..--+-.......++++...+++|+|.--| =+.|-|- .|-.++.|+....+
T Consensus 30 ~r~GV~A~SL~eL~~K~~~~l~i~~~~~~v~lvLeeDGTeVd~EeYF~---tLp~nT~lm~L~~g 91 (100)
T d1f2ri_ 30 DQHGVAASSLEELRSKACELLAIDKSLTPITLVLAEDGTIVDDDDYFL---CLPSNTKFVALACN 91 (100)
T ss_dssp EEEEEEESSHHHHHHHHHHHHCCCGGGCSCEEEESSSCCBCCSSSSSS---SSCSCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEECCHHHHH---CCCCCCEEEEECCC
T ss_conf 504688389999999999984888876641899937896974478874---27888799997799
No 50
>d3d37a1 b.106.1.1 (A:6-178) Baseplate protein gpP {Neisseria meningitidis [TaxId: 487]}
Probab=20.48 E-value=11 Score=10.39 Aligned_cols=58 Identities=14% Similarity=0.074 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 32689999999880899850110569999884310114-6789999999999808996548
Q gi|254780662|r 891 ATFSDTANILAQEAKFWLDDAFASGGSMGYDHKKMGIT-ARGAWETVKRHFREMDIDIQST 950 (1576)
Q Consensus 891 a~fsD~An~ia~~~gfwlgdAFaSGgs~GydHK~mGIT-arGaw~~v~rhfrelg~D~q~~ 950 (1576)
.|-+|++..++.+||..-. +......++.-..|-|- .-..|++++|..++-|+-.--+
T Consensus 106 ~t~~~Iv~~v~~~~g~~~~--v~~~~~~~~~~~~~~vQ~~ETd~~fl~Rla~~~G~~~~~e 164 (173)
T d3d37a1 106 MTVLDAAKKLAAPWPQIKA--VVLKAENNPALGKIDIEPGETVWQALTHIANSVGLHPWLE 164 (173)
T ss_dssp SBHHHHHHHHHTTCTTSCC--EEEESSCCCBBCCCCCCTTCBHHHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHHHHHHHHCCCCCC--EEECCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEC
T ss_conf 9999999999987298642--0101456886555880689889999999999789899997
Done!