Query gi|254780663|ref|YP_003065076.1| carbonate dehydratase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 207
No_of_seqs 125 out of 2127
Neff 7.8
Searched_HMMs 33803
Date Wed Jun 1 15:25:34 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780663.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1ym3_A Carbonic anhydrase (ca 100.0 0 0 345.9 18.7 193 3-204 16-214 (215)
2 >1ekj_A Beta-carbonic anhydras 100.0 0 0 330.8 19.5 172 33-205 1-176 (178)
3 >3eyx_A Carbonic anhydrase; ro 100.0 0 0 324.1 18.0 169 29-203 2-177 (178)
4 >1i6p_A Carbonic anhydrase; me 100.0 0 0 322.5 17.9 173 26-204 1-174 (194)
5 >3e3i_A Carbonic anhydrase 2, 100.0 0 0 318.8 17.2 171 28-204 1-172 (201)
6 >1ddz_A Carbonic anhydrase; al 100.0 1.4E-45 0 316.3 16.7 166 34-205 1-168 (254)
7 >2w3q_A Carbonic anhydrase 2; 100.0 1.4E-44 0 309.1 17.4 167 33-205 1-173 (180)
8 >1ylk_A Hypothetical protein R 100.0 3.9E-40 1.1E-44 280.3 8.4 139 31-197 2-140 (140)
9 >1g5c_A Beta-carbonic anhydras 100.0 1.8E-39 5.2E-44 276.0 8.0 149 29-199 2-152 (152)
10 >1ddz_A Carbonic anhydrase; al 100.0 6.9E-29 2.1E-33 207.2 19.1 182 7-198 38-227 (242)
11 >2hwk_A Helicase NSP2; rossman 78.4 1.9 5.7E-05 22.6 3.0 36 159-200 4-40 (49)
12 >3gcf_A Terminal oxygenase com 51.8 7.2 0.00021 18.9 1.6 15 181-195 13-27 (37)
13 >1gxu_A Hydrogenase maturation 50.1 7.1 0.00021 18.9 1.3 27 177-203 32-58 (91)
14 >2bjd_A Acylphosphatase; hyper 49.3 15 0.00044 16.8 2.8 19 177-195 39-57 (101)
15 >1ctt_A Cytidine deaminase; hy 47.0 19 0.00055 16.2 4.2 66 52-117 42-112 (121)
16 >3d89_A Rieske domain-containi 46.8 9.6 0.00028 18.0 1.6 26 179-204 21-48 (57)
17 >1wm1_A Proline iminopeptidase 46.7 19 0.00056 16.1 4.1 82 32-113 36-123 (209)
18 >2fhm_A Probable acylphosphata 44.0 20 0.00059 16.0 2.8 19 177-195 27-45 (91)
19 >2hu5_A Acylamino-acid-releasi 43.7 21 0.00062 15.8 3.5 36 78-113 118-153 (280)
20 >1fqt_A Rieske-type ferredoxin 42.8 7.2 0.00021 18.9 0.4 17 179-195 52-68 (72)
21 >2z72_A Protein-tyrosine-phosp 42.6 16 0.00047 16.6 2.2 31 82-113 72-102 (113)
22 >3dqy_A Toluene 1,2-dioxygenas 42.2 7.5 0.00022 18.8 0.4 16 179-194 51-66 (71)
23 >2qpz_A Naphthalene 1,2-dioxyg 40.4 6.9 0.0002 19.0 0.0 17 179-195 51-67 (71)
24 >1urr_A CG18505 protein; acylp 40.1 21 0.00062 15.8 2.5 19 177-195 36-54 (102)
25 >2de6_D Ferredoxin component o 39.8 7.7 0.00023 18.7 0.2 17 179-195 17-33 (37)
26 >2de6_A Terminal oxygenase com 39.6 13 0.00037 17.3 1.3 20 178-197 90-109 (147)
27 >2vh7_A Acylphosphatase-1; hyd 37.6 26 0.00077 15.2 2.8 22 177-198 33-55 (99)
28 >2i7f_A Ferredoxin component o 37.4 5.3 0.00016 19.7 -0.9 16 179-194 17-32 (38)
29 >2fuk_A XC6422 protein; A/B hy 37.2 26 0.00078 15.2 4.0 52 62-113 77-129 (220)
30 >1w2i_A Acylphosphatase; hydro 35.5 28 0.00082 15.1 2.5 19 177-195 29-47 (91)
31 >2e87_A Hypothetical protein P 35.2 19 0.00055 16.2 1.6 10 35-44 7-16 (195)
32 >2c78_A Elongation factor TU-A 34.1 15 0.00046 16.7 1.0 58 34-99 75-133 (215)
33 >1aps_A Acylphosphatase; hydro 33.5 26 0.00077 15.2 2.1 19 177-195 32-50 (98)
34 >2rdo_7 EF-G, elongation facto 32.9 17 0.0005 16.5 1.0 49 48-106 97-147 (289)
35 >1ulr_A Putative acylphosphata 32.1 32 0.00094 14.7 2.8 19 177-195 27-45 (88)
36 >2q0x_A Protein DUF1749, uncha 31.3 33 0.00097 14.6 3.1 83 30-112 35-125 (335)
37 >2vtv_A PHB depolymerase PHAZ7 31.2 33 0.00097 14.6 3.1 35 79-113 98-132 (281)
38 >1j1i_A META cleavage compound 30.6 34 0.001 14.5 3.6 84 30-113 33-124 (296)
39 >1ega_A Protein (GTP-binding p 30.5 17 0.00051 16.4 0.7 13 94-106 8-20 (181)
40 >2ojh_A Uncharacterized protei 30.5 34 0.001 14.5 2.8 29 176-204 18-46 (99)
41 >1zo1_I IF2, translation initi 30.4 21 0.00061 15.9 1.1 24 83-106 93-116 (170)
42 >2gv1_A Probable acylphosphata 29.9 19 0.00057 16.1 0.9 19 177-195 29-47 (92)
43 >2wj6_A 1H-3-hydroxy-4-oxoquin 29.1 36 0.0011 14.3 3.9 81 31-112 25-110 (207)
44 >2hf9_A Probable hydrogenase n 28.8 25 0.00074 15.3 1.3 16 31-46 36-51 (226)
45 >1zo0_A ODC-AZ, ornithine deca 28.6 36 0.0011 14.3 2.2 69 40-113 23-95 (126)
46 >3bdi_A Uncharacterized protei 28.2 37 0.0011 14.2 3.6 36 78-113 83-118 (207)
47 >1e8c_A UDP-N-acetylmuramoylal 28.1 23 0.00069 15.5 1.1 19 39-64 23-41 (90)
48 >2aiz_P Outer membrane protein 27.0 37 0.0011 14.3 1.9 31 77-107 44-74 (134)
49 >3a4m_A L-seryl-tRNA(SEC) kina 26.8 24 0.00072 15.4 1.0 15 93-107 3-17 (182)
50 >1z68_A Fibroblast activation 26.7 23 0.00068 15.6 0.8 17 181-197 34-50 (51)
51 >3def_A T7I23.11 protein; chlo 26.4 26 0.00078 15.2 1.1 15 31-45 34-48 (262)
52 >2h5e_A Peptide chain release 25.9 27 0.00081 15.1 1.1 21 84-104 125-145 (207)
53 >2w3q_A Carbonic anhydrase 2; 25.8 41 0.0012 14.0 2.4 27 6-32 35-63 (63)
54 >3iby_A Ferrous iron transport 25.6 31 0.00093 14.7 1.4 11 96-106 3-13 (173)
55 >1znw_A Guanylate kinase, GMP 25.3 33 0.00098 14.6 1.4 20 89-108 15-34 (155)
56 >1zun_B Sulfate adenylate tran 24.8 30 0.00088 14.9 1.1 12 35-46 26-37 (238)
57 >2k1s_A Inner membrane lipopro 24.7 43 0.0013 13.8 2.9 29 79-107 50-78 (149)
58 >1orv_A Dipeptidyl peptidase I 24.4 27 0.0008 15.1 0.8 17 181-197 36-52 (53)
59 >1ukf_A Avirulence protein AVR 24.3 43 0.0013 13.8 3.4 27 181-207 132-158 (188)
60 >2hjg_A GTP-binding protein EN 24.2 34 0.001 14.5 1.3 15 93-107 2-16 (167)
61 >2hqs_H Peptidoglycan-associat 23.8 44 0.0013 13.7 3.7 33 75-107 18-50 (118)
62 >3a1s_A Iron(II) transport pro 23.6 28 0.00082 15.0 0.8 11 96-106 7-17 (173)
63 >1n0u_A EF-2, elongation facto 23.3 31 0.00093 14.7 1.0 66 32-107 96-164 (304)
64 >2r11_A Carboxylesterase NP; 2 23.2 46 0.0013 13.6 3.7 56 58-113 95-152 (306)
65 >2zf8_A MOTY, component of sod 22.8 46 0.0014 13.6 3.4 15 93-107 39-53 (124)
66 >1k1x_A 4-alpha-glucanotransfe 22.3 33 0.00098 14.5 1.0 86 95-191 4-91 (175)
67 >1dar_A EF-G, elongation facto 22.1 33 0.00098 14.6 0.9 65 33-107 76-143 (283)
68 >2hjg_A GTP-binding protein EN 22.0 36 0.0011 14.3 1.1 11 96-106 10-20 (186)
69 >2wji_A Ferrous iron transport 22.0 36 0.0011 14.3 1.1 12 95-106 4-15 (165)
70 >2qtf_A Protein HFLX, GTP-bind 21.9 40 0.0012 14.0 1.3 12 34-45 9-20 (193)
71 >1kez_A Erythronolide synthase 21.6 49 0.0014 13.5 3.5 36 78-113 117-152 (300)
72 >3kb5_A Tripartite motif-conta 21.4 49 0.0015 13.4 4.3 24 177-200 132-155 (193)
73 >2dy1_A Elongation factor G; t 21.3 38 0.0011 14.1 1.1 13 36-48 102-114 (277)
74 >3b60_A Lipid A export ATP-bin 21.3 43 0.0013 13.8 1.4 106 90-198 34-161 (181)
75 >3iev_A GTP-binding protein ER 20.5 35 0.001 14.4 0.8 25 82-106 111-135 (204)
76 >2gj8_A MNME, tRNA modificatio 20.4 43 0.0013 13.8 1.2 14 94-107 4-17 (172)
77 >1gg4_A UDP-N-acetylmuramoylal 20.3 40 0.0012 14.0 1.1 20 39-65 26-45 (81)
78 >1tq4_A IIGP1, interferon-indu 20.1 45 0.0013 13.7 1.3 62 34-105 52-119 (197)
79 >1l2t_A Hypothetical ABC trans 20.0 44 0.0013 13.7 1.2 16 92-107 29-44 (235)
No 1
>>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbonic dehydratase); Zn protein, structural proteomics in europe, spine; 1.75A {Mycobacterium tuberculosis H37RV} PDB: 2a5v_A (A:)
Probab=100.00 E-value=0 Score=345.86 Aligned_cols=193 Identities=28% Similarity=0.421 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHCCC-----CHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 469999999999970687-----988999862389975999962678998888517886624888624223457777753
Q gi|254780663|r 3 SFPNTLLERHREFIQDQY-----DKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQ 77 (207)
Q Consensus 3 ~~~~~Ll~~N~~f~~~~~-----~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~ 77 (207)
+-+++|++||++|++++. .+++|+.|++||+|+++||||||||++||.+||++|||+||+||+||+|
T Consensus 16 ~~l~~ll~gN~~f~~~~~~~~~~~~~~~~~l~~gq~P~~~vi~CsDsRv~pe~i~~~~~GdlfvvRn~Gn~v-------- 87 (215)
T 1ym3_A 16 AAWKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVI-------- 87 (215)
T ss_dssp HHHHHHHHHHHHHHHTCCSSGGGC----------CCCSEEEEEETTCSSCHHHHTTCCTTSEEEEEEGGGCC--------
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEECCCCC--------
T ss_conf 999999999999983975685438899987415899836999405778787773389987468983043446--------
Q ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 02578887767220576689998158538988753000013463310146898888999986401632468799999999
Q gi|254780663|r 78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIR 157 (207)
Q Consensus 78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~ 157 (207)
+.++++|||||+.+|+|++|||||||+||||+++++..........+...+....++... .....+.+..+.++++||+
T Consensus 88 ~~~~~asieyav~~L~v~~IvV~GHt~CGav~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~NV~ 166 (215)
T 1ym3_A 88 DSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVL-LGRRDGLSRVDEFEQRHVH 166 (215)
T ss_dssp CHHHHHHHHHHHHTSCCCEEEEEEESSCHHHHHHHHHHHHTSCCSTTHHHHHHHHHHHHH-HHHHTTCCSHHHHHHHHHH
T ss_pred CHHHHEEEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHH
T ss_conf 843401568864127867899976865068887651012456763226799998605555-3201432243279999999
Q ss_pred HHHHHHHCC-HHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCEEEE
Q ss_conf 999997309-78899997799679999998898769998468882583
Q gi|254780663|r 158 NSLKNIRNF-PFVNKLEKEHMLQIHGAWFDISSGKLWILDPTSNEFTC 204 (207)
Q Consensus 158 ~~v~~L~~~-p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~~~~F~~ 204 (207)
.|+++|+++ |++++++++|+|.||||+||++||+|++|+.+++.|+.
T Consensus 167 ~~v~~l~~~~~~~~~~~~~g~l~I~G~~ydi~tG~v~~l~~~~~~~~~ 214 (215)
T 1ym3_A 167 ETVAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIGEE 214 (215)
T ss_dssp HHHHHHHHHCHHHHHHHHHTSCEEEEEEECTTTCCCEEEEEESCCSCC
T ss_pred HHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCC
T ss_conf 999999746999999998898389999998787079999889865882
No 2
>>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} (A:44-221)
Probab=100.00 E-value=0 Score=330.82 Aligned_cols=172 Identities=37% Similarity=0.620 Sum_probs=159.0
Q ss_pred CCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
Q ss_conf 97599996267899888851788662488862422345777775302578887767220576689998158538988753
Q gi|254780663|r 33 KPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVL 112 (207)
Q Consensus 33 ~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~ 112 (207)
+|+++||||||||++|+.+||++|||+||+||+||+|||+... .+.++++|||||+.+|++++|+|||||+|||+++++
T Consensus 1 ~P~~~~i~C~DsRv~p~~i~~~~~GdlfvvRN~GN~V~~~~~~-~~~~~~asleyAv~~l~v~~IvV~GHt~Cgav~aa~ 79 (178)
T 1ekj_A 1 SPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQA-KYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLL 79 (178)
T ss_dssp CCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTT-TCHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH
T ss_conf 9987999405889898998099998689987157753876566-651079999999986089779996588871677766
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECC
Q ss_conf 000013463310146898888999986401----6324687999999999999973097889999779967999999889
Q gi|254780663|r 113 DSNNSSTSPGDFIGKWMDIVRPIAQKIVAN----NPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIHGAWFDIS 188 (207)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~G~~yDi~ 188 (207)
+.........++++.|+..++++....... ......+.++++||++|+++|++||+|++++++|++.|||||||++
T Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~~qv~~L~~~p~i~~~~~~g~l~IhG~~ydi~ 159 (178)
T 1ekj_A 80 SFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFV 159 (178)
T ss_dssp HCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETT
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEEEECC
T ss_conf 54430476776289999988989999987626999899999999999999999997398899999869849999999888
Q ss_pred CCEEEEEECCCCEEEEC
Q ss_conf 87699984688825833
Q gi|254780663|r 189 SGKLWILDPTSNEFTCD 205 (207)
Q Consensus 189 tG~v~~l~~~~~~F~~~ 205 (207)
||+|++|+.+++.|+..
T Consensus 160 tG~v~~l~~~~~~~~~i 176 (178)
T 1ekj_A 160 KGSFELWGLEFGLSSTF 176 (178)
T ss_dssp TTEEEEEEECCCCCCCC
T ss_pred CCEEEEEECCCCCCCCC
T ss_conf 87799983246888777
No 3
>>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} (A:39-216)
Probab=100.00 E-value=0 Score=324.06 Aligned_cols=169 Identities=27% Similarity=0.463 Sum_probs=151.6
Q ss_pred HCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHH
Q ss_conf 23899759999626789988885178866248886242234577777530257888776722057668999815853898
Q gi|254780663|r 29 ANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGI 108 (207)
Q Consensus 29 ~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav 108 (207)
++||+|+++|||||||||| +.+||++|||+||+||+||+|+|. +.++++|||||+.+|++++|||||||+||||
T Consensus 2 a~gq~P~~~~i~C~DsRvp-e~i~~~~~GdlfvvRn~Gn~v~~~-----~~~~~~sleyav~~l~v~~IvV~GHt~CGav 75 (178)
T 3eyx_A 2 AKGQSPHTLFIGCSDSRYN-ENCLGVLPGEVFTWKNVANICHSE-----DLTLKATLEFAIICLKVNKVIICGHTDCGGI 75 (178)
T ss_dssp ----CCSEEEEEECCTTCC-GGGGCCCTTSEEEEEEGGGCCCTT-----CHHHHHHHHHHHHTTCCSEEEEEEESSCHHH
T ss_pred HCCCCCCEEEEECCCCCCC-CCCCCCCCCCEEEEEEECCCCCCC-----CHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf 3689995489940477878-564799986556761024644887-----5325766464420278768999768617788
Q ss_pred HHHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE
Q ss_conf 8753000013--463310146898888999986401-----632468799999999999997309788999977996799
Q gi|254780663|r 109 QAVLDSNNSS--TSPGDFIGKWMDIVRPIAQKIVAN-----NPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIH 181 (207)
Q Consensus 109 ~aa~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~ 181 (207)
+++++..... ....++++.|+..++++....... .+.++.+.++++||+.|+++|++||+|++++++|+|+||
T Consensus 76 ~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NV~~qv~~L~~~p~i~~~~~~g~l~V~ 155 (178)
T 3eyx_A 76 KTCLTNQREALPKVNCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGELQVY 155 (178)
T ss_dssp HHHHTTCGGGTGGGTCHHHHHHTHHHHHHHHHTHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHTTSCEEE
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEE
T ss_conf 87775233057643442147799999999999887501347889999999999999999999759899999986980899
Q ss_pred EEEEECCCCEEEEEECCCCEEE
Q ss_conf 9999889876999846888258
Q gi|254780663|r 182 GAWFDISSGKLWILDPTSNEFT 203 (207)
Q Consensus 182 G~~yDi~tG~v~~l~~~~~~F~ 203 (207)
||+||++||+|++|+++.+.|+
T Consensus 156 G~~yDi~tG~v~~l~~~~~~~~ 177 (178)
T 3eyx_A 156 GLLYNVEDGLLQTVSTYTKVTP 177 (178)
T ss_dssp EEEECTTTCCEEEEEEECSSSC
T ss_pred EEEEECCCCEEEEECCCCCCCC
T ss_conf 9999889857999778888798
No 4
>>1i6p_A Carbonic anhydrase; metalloenzyme, zinc coordination, PH- dependent activity, MAD phasing, lyase; 2.00A {Escherichia coli} (A:27-220)
Probab=100.00 E-value=0 Score=322.53 Aligned_cols=173 Identities=30% Similarity=0.465 Sum_probs=148.2
Q ss_pred HHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf 98623899759999626789988885178866248886242234577777530257888776722057668999815853
Q gi|254780663|r 26 QELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRC 105 (207)
Q Consensus 26 ~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~C 105 (207)
++|++||+|+++||||||||++|+.+||++|||+||+||+||+|++. +.++++|||||+.+|++++|||||||+|
T Consensus 1 ~~l~~gq~P~~~vi~C~DsRv~p~~i~~~~~Gd~fv~Rn~Gn~v~~~-----d~~~~~sle~av~~l~v~~ivV~GHt~C 75 (194)
T 1i6p_A 1 EKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHT-----DLNCLSVVQYAVDVLEVEHIIICGHYGC 75 (194)
T ss_dssp HHHHSCCCCSEEEEEETTCSSCHHHHHCCCTTSEEEEEETTCCCCTT-----CHHHHHHHHHHHHTSCCSEEEEEEETTC
T ss_pred HHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCC-----CCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 98606899835999863889897884589986367761135656876-----5016899999998628846999279760
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHCCCCEEEEEE
Q ss_conf 898875300001346331014689888899998640163246879999999999999730978899-9977996799999
Q gi|254780663|r 106 GGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNK-LEKEHMLQIHGAW 184 (207)
Q Consensus 106 Gav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~-~v~~g~l~I~G~~ 184 (207)
|||+++++....... ..+...+...............+.++.+.++++||+.|+++|+++|+|++ ++++|+|.||||+
T Consensus 76 Gav~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NV~~qv~~L~~~p~v~~~~v~~g~l~V~G~~ 154 (194)
T 1i6p_A 76 GGVQAAVENPELGLI-NNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWA 154 (194)
T ss_dssp HHHHHHHHCCCCSTH-HHHHHHHHHHHHHTHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHSHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHCCCCCCC-HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEE
T ss_conf 354423321335530-4666665999999864113354678899999999999999987297989999819962899999
Q ss_pred EECCCCEEEEEECCCCEEEE
Q ss_conf 98898769998468882583
Q gi|254780663|r 185 FDISSGKLWILDPTSNEFTC 204 (207)
Q Consensus 185 yDi~tG~v~~l~~~~~~F~~ 204 (207)
||++||+|++|+..++.|+.
T Consensus 155 yDi~tG~v~~l~~~~~~~~~ 174 (194)
T 1i6p_A 155 YGIHDGLLRDLDVTATNRET 174 (194)
T ss_dssp ECTTTCCEEECSCCBSSHHH
T ss_pred EECCCCEEEEECCCCCCCCC
T ss_conf 98898379984389997130
No 5
>>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, metal-binding, zinc; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A (A:29-229)
Probab=100.00 E-value=0 Score=318.82 Aligned_cols=171 Identities=29% Similarity=0.489 Sum_probs=146.0
Q ss_pred HHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf 62389975999962678998888517886624888624223457777753025788877672205766899981585389
Q gi|254780663|r 28 LANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG 107 (207)
Q Consensus 28 l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa 107 (207)
|++||+|+++||||||||++|+.+||++|||+||+||+||+|+|. +.++++|||||+..|++++|||||||+|||
T Consensus 1 L~~gQ~P~~~vitC~DsRv~pe~i~~~~~GdlfvvRNaGn~v~~~-----d~~~~~sleyAv~~l~v~~IvV~GHt~CGa 75 (201)
T 3e3i_A 1 LADHQTPHYLWIACSDSRVPAEKLTNLEPGELFVHRNVANQVIHT-----DFNCLSVVQYAVDVLKIEHIIICGHTNCGG 75 (201)
T ss_dssp -----CCCEEEEEETTCCSCHHHHHTCCTTSEEEEEETTCCCCTT-----CHHHHHHHHHHHHTSCCCEEEEEEESSCHH
T ss_pred HCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCC-----CHHHHHHHHHEEEECCCCEEEEECCCCCCC
T ss_conf 606899964999775779798886589986457774126778984-----344466412201316864699972677752
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHCCCCEEEEEEEE
Q ss_conf 8875300001346331014689888899998640163246879999999999999730978899-997799679999998
Q gi|254780663|r 108 IQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNK-LEKEHMLQIHGAWFD 186 (207)
Q Consensus 108 v~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~-~v~~g~l~I~G~~yD 186 (207)
|++++....... ...++..+....+............+..+.++++||++|+++|+++|+|++ ++.+|+|.||||+||
T Consensus 76 v~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~~qv~~L~~~p~v~~~~~~~g~l~V~G~~yd 154 (201)
T 3e3i_A 76 IHAAMADKDLGL-INNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYD 154 (201)
T ss_dssp HHHHHSCCCCST-HHHHHHHHHHHHHHTHHHHHTBCGGGHHHHHHHHHHHHHHHHHHTSHHHHHHHHTTCCCEEEEEEEC
T ss_pred HHHHHCCCCCCC-CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEEEE
T ss_conf 022210344565-4247887889999877651034505678889999999999999729688899984993189999998
Q ss_pred CCCCEEEEEECCCCEEEE
Q ss_conf 898769998468882583
Q gi|254780663|r 187 ISSGKLWILDPTSNEFTC 204 (207)
Q Consensus 187 i~tG~v~~l~~~~~~F~~ 204 (207)
++||+|++++...+.|+.
T Consensus 155 i~tG~v~~~~~~~~~~~~ 172 (201)
T 3e3i_A 155 VNDGFLVDQGVMATSRET 172 (201)
T ss_dssp TTTCCEEEEEEEESSHHH
T ss_pred CCCCEEEECCCCCCCCHH
T ss_conf 898479973688886102
No 6
>>1ddz_A Carbonic anhydrase; alpha-beta-alpha; 2.20A {Porphyridium cruentum} (A:67-320)
Probab=100.00 E-value=1.4e-45 Score=316.28 Aligned_cols=166 Identities=27% Similarity=0.408 Sum_probs=142.8
Q ss_pred CEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 75999962678998888517886624888624223457777753025788877672205766899981585389887530
Q gi|254780663|r 34 PKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 34 P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
|+++|||||||||+|+.+||++|||+||+||+||+|+|+ +.++++|||||+.+|+|++|||||||+||||+++++
T Consensus 1 P~~l~I~CsDSRV~pe~i~~~~pGdlFVvRNaGN~V~~~-----d~~~~asleyAV~~L~V~~IvV~GHt~CGav~a~~~ 75 (254)
T 1ddz_A 1 PEYLWIGCADSRVPANQLLDLPAGEVFVHRNIANQCIHS-----DISFLSVLQYAVQYLKVKHILVCGHYGCGGAKAALG 75 (254)
T ss_dssp CSEEEEEETTCSSCHHHHTTCCTTSEEEEEEGGGCCCTT-----CHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCC-----CCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHC
T ss_conf 976999877768898997099998679986058877876-----503789999999861886799936899842887640
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHCCHHHHHH-HHCCCCEEEEEEEECCCCE
Q ss_conf 000134633101468988889999864016-32468799999999999997309788999-9779967999999889876
Q gi|254780663|r 114 SNNSSTSPGDFIGKWMDIVRPIAQKIVANN-PTEKQTILEQLSIRNSLKNIRNFPFVNKL-EKEHMLQIHGAWFDISSGK 191 (207)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~nV~~~v~~L~~~p~i~~~-v~~g~l~I~G~~yDi~tG~ 191 (207)
..... ....++..|....++....+.... +.+..+.++++||+.|+++|+++|+|+++ +++|+|.||||+||++||+
T Consensus 76 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~NV~~qve~L~~~p~V~~~~~~~g~l~VhG~vYDi~tG~ 154 (254)
T 1ddz_A 76 DSRLG-LIDNWLRHIRDVRRMNAKYLDKCKDGDEELNRLIELNVLEQVHNVCATSIVQDAWDAGQELTVQGVVYGVGDGK 154 (254)
T ss_dssp CCCCT-HHHHHHHHHHHHHHHTHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHTTCCCEEEEEEECTTTTC
T ss_pred CCCCC-HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEEEECCCCE
T ss_conf 45443-37899998899999877643025887999999999999999999850988899997699408999999889716
Q ss_pred EEEEECCCCEEEEC
Q ss_conf 99984688825833
Q gi|254780663|r 192 LWILDPTSNEFTCD 205 (207)
Q Consensus 192 v~~l~~~~~~F~~~ 205 (207)
|++|+...+.|+..
T Consensus 155 v~~l~~~~~~~~~l 168 (254)
T 1ddz_A 155 LRDLGVVVNSSDDI 168 (254)
T ss_dssp CEEEEEESCCCCCC
T ss_pred EEECCCCCCCHHHH
T ss_conf 99766877885787
No 7
>>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A (A:64-243)
Probab=100.00 E-value=1.4e-44 Score=309.11 Aligned_cols=167 Identities=28% Similarity=0.436 Sum_probs=152.5
Q ss_pred CCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
Q ss_conf 97599996267899888851788662488862422345777775302578887767220576689998158538988753
Q gi|254780663|r 33 KPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVL 112 (207)
Q Consensus 33 ~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~ 112 (207)
+|+++||||||||++|+.+||++|||+||+||+||+|+|. ++++++|||||+..|++++|+|||||+||||++++
T Consensus 1 sP~~~vi~C~DsRv~~e~i~~~~~GdlfviRn~Gn~v~~~-----~~~~~~sleyAv~~l~v~~IvV~GHt~CGav~a~~ 75 (180)
T 2w3q_A 1 APNFLWIGCADSRVPEVTIMARKPGDVFVQRNVANQFKPE-----DDSSQALLNYAIMNVGVTHVMVVGHTGCGGCIAAF 75 (180)
T ss_dssp CCSEEEEEECCTTCCHHHHTTCCTTSEEEEEEGGGCCCTT-----CHHHHHHHHHHHHTTCCCEEEEEEETTCHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCC-----CCCEEEEEEEEEEECCCCEEEEECCCCCHHHHHHH
T ss_conf 9976999774879899997299997479996027713887-----78603667876554586579992587732899987
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC------CCEEEEEEEE
Q ss_conf 0000134633101468988889999864016324687999999999999973097889999779------9679999998
Q gi|254780663|r 113 DSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEH------MLQIHGAWFD 186 (207)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g------~l~I~G~~yD 186 (207)
+...... ...++..|...+++...........+..+.++++||..|+++|++||+|++++++| +|+||||+||
T Consensus 76 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~~qv~~L~~~p~i~~~~~~g~~~~~~~l~V~G~~yd 154 (180)
T 2w3q_A 76 DQPLPTE-ENPGGTPLVRYLEPIIRLKHSLPEGSDVNDLIKENVKMAVKNVVNSPTIQGAWEQARKGEFREVFVHGWLYD 154 (180)
T ss_dssp TCCCC------CCSHHHHHTHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSSCCCEEEEEEEE
T ss_pred HCCCCCC-CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 3423444-477401689999999998733846778889999999999999970989999998533167883389999998
Q ss_pred CCCCEEEEEECCCCEEEEC
Q ss_conf 8987699984688825833
Q gi|254780663|r 187 ISSGKLWILDPTSNEFTCD 205 (207)
Q Consensus 187 i~tG~v~~l~~~~~~F~~~ 205 (207)
++||+|++++.+++.|+..
T Consensus 155 i~tG~v~~l~~~~~~~~~~ 173 (180)
T 2w3q_A 155 LSTGNIVDLNVTQGPHPFV 173 (180)
T ss_dssp TTTTEEEECSCCBCSCC--
T ss_pred CCCCEEEEECCCCCCCCCC
T ss_conf 8996798847887888650
No 8
>>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in europe, spine, structural genomics; 2.00A {Mycobacterium tuberculosis H37RV} (A:33-172)
Probab=100.00 E-value=3.9e-40 Score=280.26 Aligned_cols=139 Identities=24% Similarity=0.382 Sum_probs=119.6
Q ss_pred CCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
Q ss_conf 89975999962678998888517886624888624223457777753025788877672205766899981585389887
Q gi|254780663|r 31 QQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQA 110 (207)
Q Consensus 31 ~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~a 110 (207)
||+|+++||||||||++|+.+||.+|||+|++||+||+|+ .+.++||+||+.+|++++|+|||||+|||+++
T Consensus 2 gq~p~~~vi~C~DsRv~~~~i~~~~~Gd~fv~Rn~Gn~v~--------~~~~~sle~av~~l~v~~IvV~GHt~Cg~~~~ 73 (140)
T 1ylk_A 2 PPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT--------DDVIRSLAISQRLLGTREIILLHHTDCGMLTF 73 (140)
T ss_dssp SCTTCEEEEEECCTTCCHHHHHTCCTTSEEEEEETTSCCC--------HHHHHHHHHHHHTTCCCEEEEEEESSCGGGSC
T ss_pred CCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCC--------HHHHCEEEEEEEECCCCEEEEEEECCCCCCCC
T ss_conf 8898669999646675787874899975799985055588--------03310035403106986899997368886312
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCC
Q ss_conf 53000013463310146898888999986401632468799999999999997309788999977996799999988987
Q gi|254780663|r 111 VLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIHGAWFDISSG 190 (207)
Q Consensus 111 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~G~~yDi~tG 190 (207)
+.+....... ..........+..+.++++||++|+++|++||++++ +|+||||+||++||
T Consensus 74 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~e~nV~~qv~~L~~~p~v~~-----~l~I~G~~ydi~tG 133 (140)
T 1ylk_A 74 TDDDFKRAIQ---------------DETGIRPTWSPESYPDAVEDVRQSLRRIEVNPFVTK-----HTSLRGFVFDVATG 133 (140)
T ss_dssp CHHHHHHHHH---------------HHHSCCCSSCCCCCSCHHHHHHHHHHHHHTCTTCCC-----CSEEEEEEECTTTC
T ss_pred CHHHHHHHHH---------------HHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCC-----CCEEEEEEEECCCC
T ss_conf 4345543211---------------431368402221122689999999999972915256-----97899999988998
Q ss_pred EEEEEEC
Q ss_conf 6999846
Q gi|254780663|r 191 KLWILDP 197 (207)
Q Consensus 191 ~v~~l~~ 197 (207)
+|++++|
T Consensus 134 ~v~~l~p 140 (140)
T 1ylk_A 134 KLNEVTP 140 (140)
T ss_dssp CEEEECC
T ss_pred EEEEECC
T ss_conf 6988379
No 9
>>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} (A:19-170)
Probab=100.00 E-value=1.8e-39 Score=275.99 Aligned_cols=149 Identities=23% Similarity=0.337 Sum_probs=122.7
Q ss_pred HCCCCCEEEEEECCCCCCCH--HHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf 23899759999626789988--8851788662488862422345777775302578887767220576689998158538
Q gi|254780663|r 29 ANQQKPKIMIISCCDSRVAP--ETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCG 106 (207)
Q Consensus 29 ~~~q~P~~~vitC~DsRv~~--~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CG 106 (207)
++||+|+++||||||||++| +.+||..|||+|++||+||+|+ .+.++||+||+..|++++|+|||||+||
T Consensus 2 ~~~q~p~~~vitC~DsRv~p~~e~i~~~~~Ge~fv~Rn~Gn~v~--------~~~~~sl~~av~~l~v~~IiV~gHt~Cg 73 (152)
T 1g5c_A 2 DLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVD--------DGVIRSAAVAIYALGDNEIIIVGHTDCG 73 (152)
T ss_dssp GSSSSCCEEEEEECCGGGTTHHHHHHTCCTTSCEEEEETTCCCC--------HHHHHHHHHHHHHHCCCEEEEEEESSCC
T ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCEEEEEECCCCCC--------HHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 26999967999886789981378883899963799850366798--------4578999999986499779996678888
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEE
Q ss_conf 98875300001346331014689888899998640163246879999999999999730978899997799679999998
Q gi|254780663|r 107 GIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIHGAWFD 186 (207)
Q Consensus 107 av~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~G~~yD 186 (207)
|++++.+................... .......+.++++||++|+++|+++|+|++ ++.||||+||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~nV~~~v~~L~~~p~i~~-----~i~v~G~~yd 139 (152)
T 1g5c_A 74 MARLDEDLIVSRMRELGVEEEVIENF---------SIDVLNPVGDEEENVIEGVKRLKSSPLIPE-----SIGVHGLIID 139 (152)
T ss_dssp TTSCCHHHHHHHHHHTTCCHHHHHHH---------HHHHTSSCCCHHHHHHHHHHHHHHCTTSCT-----TSEEEEEEEC
T ss_pred EEEECHHHCCCCCCCCCCCHHHHHHH---------CHHHCCCHHHHHHHHHHHHHHHHCCCCHHC-----CCEEEEEEEE
T ss_conf 06734100234222233138888640---------222206201399999999999970930320-----8789999998
Q ss_pred CCCCEEEEEECCC
Q ss_conf 8987699984688
Q gi|254780663|r 187 ISSGKLWILDPTS 199 (207)
Q Consensus 187 i~tG~v~~l~~~~ 199 (207)
++||+|+.++.+.
T Consensus 140 i~tG~v~~~~~~~ 152 (152)
T 1g5c_A 140 INTGRLKPLYLDE 152 (152)
T ss_dssp TTTCCEEEEECCC
T ss_pred CCCCEEEEECCCC
T ss_conf 8996287717999
No 10
>>1ddz_A Carbonic anhydrase; alpha-beta-alpha; 2.20A {Porphyridium cruentum} (A:1-66,A:321-496)
Probab=99.97 E-value=6.9e-29 Score=207.22 Aligned_cols=182 Identities=29% Similarity=0.499 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHCC--CCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHH
Q ss_conf 9999999997068--79889998623899759999626789988885178866248886242234577777530257888
Q gi|254780663|r 7 TLLERHREFIQDQ--YDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAA 84 (207)
Q Consensus 7 ~Ll~~N~~f~~~~--~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~s 84 (207)
.+...|+.|.... ++|++|.+|+.||+|.++|++|.|||+|.+.|.++..||+|++||++|..-++ +.+.++.
T Consensus 38 nifanneawrqemlkqdpeffnrlangqspeilwigcadsrvpanqiinlpagevfvhrnianqcihs-----dmsflsv 112 (242)
T 1ddz_A 38 NIFANNEAWRQEMLKQDPEFFNRLANGQSPEILWIGCADSRVPANQIINLPAGEVFVHRNIANQCIHS-----DMSFLSV 112 (242)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHTCCCCSEEEEEETTCSSCHHHHTTCCTTSEEEEEETTCCCCTT-----CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCC-----CCCHHHH
T ss_conf 99999999997524449799998637999976999853779899997199997679987358857887-----6422355
Q ss_pred HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHHHHHHH
Q ss_conf 7767220576689998158538988753000013463310146898888999986-----40163246879999999999
Q gi|254780663|r 85 IEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKI-----VANNPTEKQTILEQLSIRNS 159 (207)
Q Consensus 85 le~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~nV~~~ 159 (207)
+.||+..|+|+.++||||+.||++.++... ...+++++|+..++|..... .-.++.+..+.+.+.|+++|
T Consensus 113 lqyavqylkvkrvvvcghYa~~~Ca~~lS~-----SAlgLIDnWlRHIRPIRr~~KRElS~ITDpkDsLdRLsqINvLqQ 187 (242)
T 1ddz_A 113 LQYAVQYLKVKRVVVCGHYACGGCAAALGD-----SRLGLIDNWLRHIRDVRRHNQAELSRITDPKDSLNRLIEINVLEQ 187 (242)
T ss_dssp HHHHHHTSCCSEEEEEEETTCHHHHHTTSC-----CCCTTHHHHTHHHHHHHHTTHHHHTTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCHHHHCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 899998618977999089996777610205-----644517999999999999877653235887899999999999999
Q ss_pred HHHHHCCHHHHHHHHCCC-CEEEEEEEECCCCEEEEEECC
Q ss_conf 999730978899997799-679999998898769998468
Q gi|254780663|r 160 LKNIRNFPFVNKLEKEHM-LQIHGAWFDISSGKLWILDPT 198 (207)
Q Consensus 160 v~~L~~~p~i~~~v~~g~-l~I~G~~yDi~tG~v~~l~~~ 198 (207)
++++.++.+++++++.|+ |.|-|.+|-+.+|++.....-
T Consensus 188 l~nVas~~~~qdawdagqelevqgvvygvgdgklrdmgvv 227 (242)
T 1ddz_A 188 MHNVCATSIVQDAWDAGQELEVQGVVYGVGDGKLRDMGVV 227 (242)
T ss_dssp HHHHHHSHHHHHHHHTTCCCEEEEEEECTTTTCCEEEEEE
T ss_pred HHHHHCCHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECC
T ss_conf 9999739776799875995189999998898179997088
No 11
>>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus} (A:92-140)
Probab=78.38 E-value=1.9 Score=22.59 Aligned_cols=36 Identities=22% Similarity=0.478 Sum_probs=29.7
Q ss_pred HHHHH-HCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCC
Q ss_conf 99997-3097889999779967999999889876999846888
Q gi|254780663|r 159 SLKNI-RNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDPTSN 200 (207)
Q Consensus 159 ~v~~L-~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~~~ 200 (207)
.++.| +.||-|.++++.|+ ++|+.||.+..+++.-+
T Consensus 4 v~rqLarRYP~l~kAv~TGR------v~D~~t~tlr~Y~P~iN 40 (49)
T 2hwk_A 4 VVRQLSRRYPQLPRAVATGR------VYDMNTGTLRNYDPRIN 40 (49)
T ss_dssp HHHHHHTTCTTHHHHHHHTC------EECTTTSSEECCCTTSC
T ss_pred HHHHHHHHCCHHHHHHCCCE------EEEECCCCCCCCCCCCC
T ss_conf 99999886853233313773------89834784425886543
No 12
>>3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans} (A:87-123)
Probab=51.83 E-value=7.2 Score=18.87 Aligned_cols=15 Identities=33% Similarity=0.618 Sum_probs=13.9
Q ss_pred EEEEEECCCCEEEEE
Q ss_conf 999998898769998
Q gi|254780663|r 181 HGAWFDISSGKLWIL 195 (207)
Q Consensus 181 ~G~~yDi~tG~v~~l 195 (207)
|||-|++++|+|...
T Consensus 13 Hg~Tf~l~dG~L~~I 27 (37)
T 3gcf_A 13 HGWTYDLDDGRLVDV 27 (37)
T ss_dssp TCEEEETTTCBEEEE
T ss_pred CCCEECCCCCCCCCC
T ss_conf 898884887524457
No 13
>>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} (A:)
Probab=50.09 E-value=7.1 Score=18.88 Aligned_cols=27 Identities=22% Similarity=0.250 Sum_probs=22.4
Q ss_pred CCEEEEEEEECCCCEEEEEECCCCEEE
Q ss_conf 967999999889876999846888258
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWILDPTSNEFT 203 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l~~~~~~F~ 203 (207)
++.|.||+.+..+|.+..+....+.|.
T Consensus 32 ~~~l~G~V~N~~dGv~~~~~g~~~~~~ 58 (91)
T 1gxu_A 32 QLNLHGDVCNDGDGVEVRLREDPEVFL 58 (91)
T ss_dssp HHTCCEEEEECSSSEEEEESSCCHHHH
T ss_pred HCCCEEEEEECCCCCEEEEECCHHHHH
T ss_conf 859919999889997999987999999
No 14
>>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A (A:)
Probab=49.28 E-value=15 Score=16.84 Aligned_cols=19 Identities=21% Similarity=0.324 Sum_probs=16.2
Q ss_pred CCEEEEEEEECCCCEEEEE
Q ss_conf 9679999998898769998
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWIL 195 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l 195 (207)
++.|.||+.+..+|.|+.+
T Consensus 39 ~lgl~G~V~N~~dG~Vei~ 57 (101)
T 2bjd_A 39 RLGIKGYAKNLPDGSVEVV 57 (101)
T ss_dssp HTTCEEEEEECTTSCEEEE
T ss_pred HCCCEEEEEECCCCEEEEE
T ss_conf 7498079999999989999
No 15
>>1ctt_A Cytidine deaminase; hydrolase; HET: DHZ; 2.20A {Escherichia coli} (A:174-294)
Probab=47.05 E-value=19 Score=16.17 Aligned_cols=66 Identities=12% Similarity=0.005 Sum_probs=40.0
Q ss_pred HCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC-----CCHHHHHHHHHHHCC
Q ss_conf 178866248886242234577777530257888776722057668999815-----853898875300001
Q gi|254780663|r 52 FNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGH-----GRCGGIQAVLDSNNS 117 (207)
Q Consensus 52 ~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GH-----t~CGav~aa~~~~~~ 117 (207)
.-..-|.+|.=.|+-|-.-+.....+..+....+..+-....++.|++... +-||+....+.....
T Consensus 42 l~~~~G~iy~G~nvEna~~~~slcaE~~Ai~~a~~~g~~~~~i~~i~~~~~~~~~~sPCG~CRq~L~e~~~ 112 (121)
T 1ctt_A 42 LECKDGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGC 112 (121)
T ss_dssp EEETTSCEEEEECBCCTTSTTCBCHHHHHHHHHHHTTCCGGGEEEEEEEECTTCSSCCHHHHHHHHHHHTC
T ss_pred EEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 99589999998877505678875899999999997599846678999993799986818999999998577
No 16
>>3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein structure initiative, PSI; 2.07A {Mus musculus} (A:61-117)
Probab=46.85 E-value=9.6 Score=18.04 Aligned_cols=26 Identities=8% Similarity=-0.042 Sum_probs=18.6
Q ss_pred EEEEEEEECCCCEEEEEEC--CCCEEEE
Q ss_conf 7999999889876999846--8882583
Q gi|254780663|r 179 QIHGAWFDISSGKLWILDP--TSNEFTC 204 (207)
Q Consensus 179 ~I~G~~yDi~tG~v~~l~~--~~~~F~~ 204 (207)
+.|||-||++||+...... .-..|.+
T Consensus 21 P~H~~~Fdl~tG~~~~~p~~~~l~~y~V 48 (57)
T 3d89_A 21 PWHKYKITLATGEGLYQSINPKDPSAKP 48 (57)
T ss_dssp TTTCCEEETTTCEEEEEECCCC-----C
T ss_pred CCCCCEEECCCCCEEECCCCCCCCCCCC
T ss_conf 8999789799968876376655556664
No 17
>>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} (A:1-140,A:249-317)
Probab=46.67 E-value=19 Score=16.13 Aligned_cols=82 Identities=15% Similarity=0.166 Sum_probs=49.7
Q ss_pred CCCEEEEE-ECCCCCCCHHHH--HCCCCCCEEEE--ECCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf 99759999-626789988885--17886624888--624223457777-7530257888776722057668999815853
Q gi|254780663|r 32 QKPKIMII-SCCDSRVAPETI--FNAKPGELFVV--RNVANIVPPYEP-DGQHHATSAAIEFAVQGLNVEHIVVMGHGRC 105 (207)
Q Consensus 32 q~P~~~vi-tC~DsRv~~~~i--~~~~~Gd~fv~--RnaGn~v~~~~~-~~~~~~~~~sle~av~~l~v~~iiV~GHt~C 105 (207)
+.|.++++ +-..+....... |...--.++.+ |-.|.--++.+. ..........++.-...++++.++|+|||-.
T Consensus 36 ~g~pvi~lHG~~g~~~~~~~~~~~~~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~lv~di~~i~~~l~i~~~~l~G~S~G 115 (209)
T 1wm1_A 36 NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWG 115 (209)
T ss_dssp TSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHH
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 99879998999987414466776521798899996898868887555544310223566887665307666167872354
Q ss_pred HHHHHHHH
Q ss_conf 89887530
Q gi|254780663|r 106 GGIQAVLD 113 (207)
Q Consensus 106 Gav~aa~~ 113 (207)
|.+...+.
T Consensus 116 g~ial~~A 123 (209)
T 1wm1_A 116 STLALAYA 123 (209)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 46899999
No 18
>>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A (A:)
Probab=43.99 E-value=20 Score=15.98 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=16.2
Q ss_pred CCEEEEEEEECCCCEEEEE
Q ss_conf 9679999998898769998
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWIL 195 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l 195 (207)
++.|.||+.+..+|.|+.+
T Consensus 27 ~~gl~G~V~N~~dg~Vei~ 45 (91)
T 2fhm_A 27 KRKLAGWVKNRDDGRVEIL 45 (91)
T ss_dssp HTTCEEEEEECTTSCEEEE
T ss_pred HCCCCEEEEECCCCCEEEE
T ss_conf 7398199999999989999
No 19
>>2hu5_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase, beta-propeller, enzyme-inhibitor complex; HET: PHE; 2.00A {Aeropyrum pernix} (A:1-22,A:325-582)
Probab=43.67 E-value=21 Score=15.83 Aligned_cols=36 Identities=19% Similarity=0.123 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 025788877672205766899981585389887530
Q gi|254780663|r 78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
..++.++++|......++.|.|+|||--|.+.....
T Consensus 118 ~~D~~~~~~~l~~~~~~~ri~i~G~S~GG~~a~~~~ 153 (280)
T 2hu5_A 118 LEDVSAAARWARESGLASELYIMGYSYGGYMTLCAL 153 (280)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHH
T ss_conf 355899999876347761798622466763222100
No 20
>>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxidoreductase; 1.60A {Burkholderia xenovorans LB400} (A:16-87)
Probab=42.80 E-value=7.2 Score=18.85 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=13.5
Q ss_pred EEEEEEEECCCCEEEEE
Q ss_conf 79999998898769998
Q gi|254780663|r 179 QIHGAWFDISSGKLWIL 195 (207)
Q Consensus 179 ~I~G~~yDi~tG~v~~l 195 (207)
+.|||.||+.||++..-
T Consensus 52 p~Hg~~F~l~tG~~~~~ 68 (72)
T 1fqt_A 52 SLHMGKFCVRTGKVKSP 68 (72)
T ss_dssp TTTCCEEETTTCCEEES
T ss_pred CCCCCEEECCCCCCCCC
T ss_conf 88898999998569458
No 21
>>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A (A:196-308)
Probab=42.62 E-value=16 Score=16.62 Aligned_cols=31 Identities=32% Similarity=0.521 Sum_probs=23.0
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 88877672205766899981585389887530
Q gi|254780663|r 82 SAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 82 ~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
.+.++-....++++.||| |||-=.+|...++
T Consensus 72 c~~l~~~L~~~g~~riVv-GHTpq~~i~~~c~ 102 (113)
T 2z72_A 72 EAELDTILQHFNVNHIVV-GHTSQERVLGLFH 102 (113)
T ss_dssp HHHHHHHHHHHTCSEEEE-CSSCCSSCEEETT
T ss_pred HHHHHHHHHHCCCCEEEE-CCEECCCCCEEEC
T ss_conf 789999998779979999-7846378768419
No 22
>>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} (A:12-82)
Probab=42.17 E-value=7.5 Score=18.75 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=12.3
Q ss_pred EEEEEEEECCCCEEEE
Q ss_conf 7999999889876999
Q gi|254780663|r 179 QIHGAWFDISSGKLWI 194 (207)
Q Consensus 179 ~I~G~~yDi~tG~v~~ 194 (207)
..|||.||+.||++..
T Consensus 51 p~Hg~~Fdl~tG~~~~ 66 (71)
T 3dqy_A 51 TLHFGKFXVRTGKVKA 66 (71)
T ss_dssp TTTCCEEETTTCCEEE
T ss_pred ECCCCEEECCCCEEEC
T ss_conf 4588789889822945
No 23
>>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida} (A:14-84)
Probab=40.39 E-value=6.9 Score=18.96 Aligned_cols=17 Identities=29% Similarity=0.560 Sum_probs=13.3
Q ss_pred EEEEEEEECCCCEEEEE
Q ss_conf 79999998898769998
Q gi|254780663|r 179 QIHGAWFDISSGKLWIL 195 (207)
Q Consensus 179 ~I~G~~yDi~tG~v~~l 195 (207)
+.|||.||+.||++..-
T Consensus 51 p~H~~~fdl~tG~~~~~ 67 (71)
T 2qpz_A 51 PLHQGRFDVCTGKALCA 67 (71)
T ss_dssp TTTTCEEETTTCCEEET
T ss_pred CCCCCEEECCCCCEECC
T ss_conf 16898996898228448
No 24
>>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} (A:)
Probab=40.10 E-value=21 Score=15.82 Aligned_cols=19 Identities=16% Similarity=0.167 Sum_probs=15.0
Q ss_pred CCEEEEEEEECCCCEEEEE
Q ss_conf 9679999998898769998
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWIL 195 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l 195 (207)
++.|.||+.+..+|.|+.+
T Consensus 36 ~lgl~G~V~N~~dG~Vei~ 54 (102)
T 1urr_A 36 RLGVRGWCMNTRDGTVKGQ 54 (102)
T ss_dssp HHTCEEEEEECTTSCEEEE
T ss_pred HCCCEEEEEECCCCCEEEE
T ss_conf 8399799999799979999
No 25
>>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D* (D:50-86)
Probab=39.80 E-value=7.7 Score=18.67 Aligned_cols=17 Identities=24% Similarity=0.385 Sum_probs=14.2
Q ss_pred EEEEEEEECCCCEEEEE
Q ss_conf 79999998898769998
Q gi|254780663|r 179 QIHGAWFDISSGKLWIL 195 (207)
Q Consensus 179 ~I~G~~yDi~tG~v~~l 195 (207)
+.||+.||+.||++...
T Consensus 17 P~H~a~Fdi~tG~~~~~ 33 (37)
T 2de6_D 17 PFHGGAFNVCTGMPASS 33 (37)
T ss_dssp TTTCCEEETTTCCEEET
T ss_pred CCCCCEEECCCCEECCC
T ss_conf 45688884899519868
No 26
>>2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} (A:1-147)
Probab=39.59 E-value=13 Score=17.27 Aligned_cols=20 Identities=15% Similarity=0.022 Sum_probs=13.8
Q ss_pred CEEEEEEEECCCCEEEEEEC
Q ss_conf 67999999889876999846
Q gi|254780663|r 178 LQIHGAWFDISSGKLWILDP 197 (207)
Q Consensus 178 l~I~G~~yDi~tG~v~~l~~ 197 (207)
-..|||.||++||++.....
T Consensus 90 Cp~H~~~f~l~tG~~~~~p~ 109 (147)
T 2de6_A 90 CWYHAWTYRWEDGVLCDILT 109 (147)
T ss_dssp CTTTCEEEETTTCBEEEETT
T ss_pred CCCCCEEEECCCCCCCCCCC
T ss_conf 79788599535441000000
No 27
>>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2k7k_A 2k7j_A 2acy_A (A:)
Probab=37.64 E-value=26 Score=15.24 Aligned_cols=22 Identities=18% Similarity=0.105 Sum_probs=16.5
Q ss_pred CCEEEEEEEECCCCEEEE-EECC
Q ss_conf 967999999889876999-8468
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWI-LDPT 198 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~-l~~~ 198 (207)
++.|.||+.+..+|.|+. +.++
T Consensus 33 ~~gl~G~V~N~~dG~V~~~~qG~ 55 (99)
T 2vh7_A 33 KLGLVGWVQNTDRGTVQGQLQGP 55 (99)
T ss_dssp HTTCEEEEEECTTSCEEEEEEEE
T ss_pred HHCCEEEEEECCCCEEEEEEEEC
T ss_conf 81988999999999899999809
No 28
>>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae} (A:49-86)
Probab=37.37 E-value=5.3 Score=19.70 Aligned_cols=16 Identities=38% Similarity=0.617 Sum_probs=13.2
Q ss_pred EEEEEEEECCCCEEEE
Q ss_conf 7999999889876999
Q gi|254780663|r 179 QIHGAWFDISSGKLWI 194 (207)
Q Consensus 179 ~I~G~~yDi~tG~v~~ 194 (207)
..||+.||+.||++..
T Consensus 17 P~H~~~Fdi~tG~~~~ 32 (38)
T 2i7f_A 17 PFHGGSFDIATGAAKA 32 (38)
T ss_dssp SSTTCEEETTTCCBCS
T ss_pred CCCCCEEECCCCCEEC
T ss_conf 2558798578885816
No 29
>>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} (A:)
Probab=37.16 E-value=26 Score=15.19 Aligned_cols=52 Identities=13% Similarity=0.194 Sum_probs=35.5
Q ss_pred EECCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 8624223457777-753025788877672205766899981585389887530
Q gi|254780663|r 62 VRNVANIVPPYEP-DGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 62 ~RnaGn~v~~~~~-~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
.|-.|..-.+... ..........+.+.....+.+.|.++|||-.|.+...+.
T Consensus 77 ~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 129 (220)
T 2fuk_A 77 FRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAA 129 (220)
T ss_dssp CTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
T ss_conf 57755678877777534999999988865415674599999646505441111
No 30
>>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} (A:)
Probab=35.47 E-value=28 Score=15.06 Aligned_cols=19 Identities=16% Similarity=0.251 Sum_probs=16.2
Q ss_pred CCEEEEEEEECCCCEEEEE
Q ss_conf 9679999998898769998
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWIL 195 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l 195 (207)
++.|.||+.+..+|.|+.+
T Consensus 29 ~~gl~G~V~N~~dG~Vei~ 47 (91)
T 1w2i_A 29 KLGVNGWVRNLPDGSVEAV 47 (91)
T ss_dssp HHTCEEEEEECTTSCEEEE
T ss_pred HCCCEEEEEECCCCEEEEE
T ss_conf 6397379999999859999
No 31
>>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural genomics, NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii OT3} (A:163-357)
Probab=35.24 E-value=19 Score=16.17 Aligned_cols=10 Identities=10% Similarity=0.175 Sum_probs=3.3
Q ss_pred EEEEEECCCC
Q ss_conf 5999962678
Q gi|254780663|r 35 KIMIISCCDS 44 (207)
Q Consensus 35 ~~~vitC~Ds 44 (207)
.++++|..++
T Consensus 7 ~v~ivG~~~~ 16 (195)
T 2e87_A 7 TVVIAGHPNV 16 (195)
T ss_dssp EEEEECSTTS
T ss_pred EEEEECCCCC
T ss_conf 7999617884
No 32
>>2c78_A Elongation factor TU-A; hydrolase, GTPase, translation elongation factor, protein synthesis, antibiotic, GTP-binding, nucleotide-binding; HET: GNP PUL; 1.4A {Thermus thermophilus} (A:1-215)
Probab=34.10 E-value=15 Score=16.71 Aligned_cols=58 Identities=17% Similarity=0.042 Sum_probs=25.7
Q ss_pred CEEEEEECCCCCC-CHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 7599996267899-88885178866248886242234577777530257888776722057668999
Q gi|254780663|r 34 PKIMIISCCDSRV-APETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVV 99 (207)
Q Consensus 34 P~~~vitC~DsRv-~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV 99 (207)
.++.+|-|.-..- ..+.+.++...|.-++=..+.-- ....+...+. ....+|++.++|
T Consensus 75 ~~~~~iDtPGh~dF~~~~~~~~~~~D~ailVvda~~G-------~~~qT~~~~~-~a~~~~~~~~iv 133 (215)
T 2c78_A 75 RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADG-------PMPQTREHIL-LARQVGVPYIVV 133 (215)
T ss_dssp CEEEEEECCCSGGGHHHHHHHHTTCSSEEEEEETTTC-------CCHHHHHHHH-HHHHTTCCCEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCC-------CCHHHHHHHH-HHHHCCCCEEEE
T ss_conf 4899962898177899987435109989999998999-------8554599999-999859986999
No 33
>>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} (A:)
Probab=33.51 E-value=26 Score=15.22 Aligned_cols=19 Identities=16% Similarity=0.027 Sum_probs=15.6
Q ss_pred CCEEEEEEEECCCCEEEEE
Q ss_conf 9679999998898769998
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWIL 195 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l 195 (207)
++.|.||+.+..+|.|+.+
T Consensus 32 ~~gl~G~V~N~~dG~Vei~ 50 (98)
T 1aps_A 32 KIGVVGWVKNTSKGTVTGQ 50 (98)
T ss_dssp HHTCEEEEECCTTCEEEEE
T ss_pred HCCCEEEEEECCCCCEEEE
T ss_conf 8599699999999989999
No 34
>>2rdo_7 EF-G, elongation factor G; elongation factor G, EF-G, RRF, GDPNP, 50S subunit, cryo-EM, REAL-space refinement, ribonucleoprotein; 9.10A {Escherichia coli} (7:1-289)
Probab=32.88 E-value=17 Score=16.46 Aligned_cols=49 Identities=16% Similarity=0.131 Sum_probs=26.8
Q ss_pred HHHHHCCCC--CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf 888517886--62488862422345777775302578887767220576689998158538
Q gi|254780663|r 48 PETIFNAKP--GELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCG 106 (207)
Q Consensus 48 ~~~i~~~~~--Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CG 106 (207)
.+.+.++.. |=++|+--..++-+ -...+-+....++++.|+++=+-|-=
T Consensus 97 ~~~~~~l~~~D~ailVVdA~~Gv~~----------qT~~~~~~a~~~~~p~i~~iNK~D~~ 147 (289)
T 2rdo_7 97 IEVERSMRVLDGAVMVYCAVGGVQP----------QSETVWRQANKYKVPRIAFVNKMDRM 147 (289)
T ss_pred HHHHHHHHHHCEEEEEEECCCCCCH----------HHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 9999999885857999978988647----------58999999987699869997330245
No 35
>>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} (A:)
Probab=32.07 E-value=32 Score=14.66 Aligned_cols=19 Identities=16% Similarity=0.319 Sum_probs=16.6
Q ss_pred CCEEEEEEEECCCCEEEEE
Q ss_conf 9679999998898769998
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWIL 195 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l 195 (207)
++.|.||+.+..+|.|+.+
T Consensus 27 ~~~l~G~V~N~~dG~Vei~ 45 (88)
T 1ulr_A 27 ELGLSGYAENLPDGRVEVV 45 (88)
T ss_dssp HTTCEEEEEECTTSCEEEE
T ss_pred HHCCEEEEEECCCCCEEEE
T ss_conf 7399389999999989999
No 36
>>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics; 2.20A {Trypanosoma brucei} (A:)
Probab=31.27 E-value=33 Score=14.58 Aligned_cols=83 Identities=5% Similarity=-0.021 Sum_probs=45.4
Q ss_pred CCCCCEEEEEE--CCCCC---CCHHHHHCCCCC-CEEEE--ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 38997599996--26789---988885178866-24888--624223457777753025788877672205766899981
Q gi|254780663|r 30 NQQKPKIMIIS--CCDSR---VAPETIFNAKPG-ELFVV--RNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMG 101 (207)
Q Consensus 30 ~~q~P~~~vit--C~DsR---v~~~~i~~~~~G-d~fv~--RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~G 101 (207)
.+..|-++++- ++.+. .-....--...| .++.+ |--|.--++.............+++.+..++.+.+.++|
T Consensus 35 ~~~~~~vv~iHG~~~~~~~~~~~~~~~~~~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~g 114 (335)
T 2q0x_A 35 MDARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHAHDAEDVDDLIGILLRDHCMNEVALFA 114 (335)
T ss_dssp TTSSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHHHHHHHHHHHHHHHHHHSCCCCEEEEE
T ss_pred CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 99886799989988655530579999999715976999656899898898873158999999999999866987669999
Q ss_pred CCCHHHHHHHH
Q ss_conf 58538988753
Q gi|254780663|r 102 HGRCGGIQAVL 112 (207)
Q Consensus 102 Ht~CGav~aa~ 112 (207)
||-.|++...+
T Consensus 115 ~S~G~~~~~~~ 125 (335)
T 2q0x_A 115 TSTGTQLVFEL 125 (335)
T ss_dssp EGGGHHHHHHH
T ss_pred ECCCHHHHHHH
T ss_conf 56647999999
No 37
>>2vtv_A PHB depolymerase PHAZ7; hydrolase; 1.9A {Paucimonas lemoignei} (A:15-173,A:221-342)
Probab=31.20 E-value=33 Score=14.57 Aligned_cols=35 Identities=6% Similarity=-0.053 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 25788877672205766899981585389887530
Q gi|254780663|r 79 HATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 79 ~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
....+.++.-...++.+.|+++|||--|.+...+.
T Consensus 98 ~Dlaa~i~~L~~~~g~~rVvLvGHSmGG~vAl~lA 132 (281)
T 2vtv_A 98 AIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATL 132 (281)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
T ss_conf 99999999999975998568999783379999999
No 38
>>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} (A:)
Probab=30.57 E-value=34 Score=14.50 Aligned_cols=84 Identities=7% Similarity=0.046 Sum_probs=48.2
Q ss_pred CCCCCEEEEEE--CCCCCCCHHH--HH-CCCCC-CEEEE--ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 38997599996--2678998888--51-78866-24888--624223457777753025788877672205766899981
Q gi|254780663|r 30 NQQKPKIMIIS--CCDSRVAPET--IF-NAKPG-ELFVV--RNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMG 101 (207)
Q Consensus 30 ~~q~P~~~vit--C~DsRv~~~~--i~-~~~~G-d~fv~--RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~G 101 (207)
.|+.|-+++|- +.+++.--.. ++ .+..| .++.+ |.-|.--.+.+...........++..+..++.+-++++|
T Consensus 33 ~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG 112 (296)
T 1j1i_A 33 AGKGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKVSIVG 112 (296)
T ss_dssp ECCSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHSCCSSCEEEEE
T ss_pred ECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 88898399989999894477899999999847998999837998888999888899999999999888628888779999
Q ss_pred CCCHHHHHHHHH
Q ss_conf 585389887530
Q gi|254780663|r 102 HGRCGGIQAVLD 113 (207)
Q Consensus 102 Ht~CGav~aa~~ 113 (207)
||--|.+...+.
T Consensus 113 ~S~Gg~ia~~~a 124 (296)
T 1j1i_A 113 NSMGGATGLGVS 124 (296)
T ss_dssp EHHHHHHHHHHH
T ss_pred ECCCHHHHHCCC
T ss_conf 234321100003
No 39
>>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} (A:1-181)
Probab=30.52 E-value=17 Score=16.41 Aligned_cols=13 Identities=23% Similarity=0.524 Sum_probs=6.0
Q ss_pred CCEEEEEECCCHH
Q ss_conf 6689998158538
Q gi|254780663|r 94 VEHIVVMGHGRCG 106 (207)
Q Consensus 94 v~~iiV~GHt~CG 106 (207)
...|+++||++||
T Consensus 8 ~~~i~iiG~~nvG 20 (181)
T 1ega_A 8 CGFIAIVGRPNVG 20 (181)
T ss_dssp EEEEEEECSSSSS
T ss_pred CCEEEEECCCCCC
T ss_conf 7489999899982
No 40
>>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} (A:1-79,A:278-297)
Probab=30.50 E-value=34 Score=14.49 Aligned_cols=29 Identities=17% Similarity=0.156 Sum_probs=20.8
Q ss_pred CCCEEEEEEEECCCCEEEEEECCCCEEEE
Q ss_conf 99679999998898769998468882583
Q gi|254780663|r 176 HMLQIHGAWFDISSGKLWILDPTSNEFTC 204 (207)
Q Consensus 176 g~l~I~G~~yDi~tG~v~~l~~~~~~F~~ 204 (207)
.++.=.=++||++||..+++-.....||-
T Consensus 18 ~~~~S~LeI~Dv~TG~~~VV~~~~~~iEA 46 (99)
T 2ojh_A 18 GSXRSSIEIFNIRTRKXRVVWQTPELFEA 46 (99)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEE
T ss_pred CCCEEEEEEEECCCCCEEEEECCCCCEEE
T ss_conf 98552899998999998999889997860
No 41
>>1zo1_I IF2, translation initiation factor 2; E. coli, ribosome, initiation of protein synthesis, cryo-eletron microscopy, translation/RNA complex; 13.80A {Escherichia coli} (I:1-170)
Probab=30.39 E-value=21 Score=15.87 Aligned_cols=24 Identities=8% Similarity=-0.069 Sum_probs=16.4
Q ss_pred HHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf 887767220576689998158538
Q gi|254780663|r 83 AAIEFAVQGLNVEHIVVMGHGRCG 106 (207)
Q Consensus 83 ~sle~av~~l~v~~iiV~GHt~CG 106 (207)
.-+..-+..++.+.|+|+-.-|.-
T Consensus 93 ~~~~~~~~~~~~p~iiv~NK~D~~ 116 (170)
T 1zo1_I 93 IEAIQHAKAAQVPVVVAVNKIDKP 116 (170)
T ss_dssp HHHHHHHHHTTCCEEEEEECSSSS
T ss_pred HHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 999999998699889999896689
No 42
>>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli} (A:)
Probab=29.95 E-value=19 Score=16.07 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=14.8
Q ss_pred CCEEEEEEEECCCCEEEEE
Q ss_conf 9679999998898769998
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWIL 195 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l 195 (207)
++.|.||+.+..+|.|+.+
T Consensus 29 ~~gi~G~V~N~~dg~Vei~ 47 (92)
T 2gv1_A 29 RLGLTGYAKNLDDGSVEVV 47 (92)
T ss_dssp HHTCCCEEEECSSSCEEEE
T ss_pred HCCCEEEEEECCCCCEEEE
T ss_conf 7097379999899989999
No 43
>>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* (A:1-130,A:200-276)
Probab=29.13 E-value=36 Score=14.35 Aligned_cols=81 Identities=20% Similarity=0.188 Sum_probs=45.2
Q ss_pred CCCCEEEEEE--CCCCCCCHHHHHCC-CCCCEEEE--ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf 8997599996--26789988885178-86624888--6242234577777530257888776722057668999815853
Q gi|254780663|r 31 QQKPKIMIIS--CCDSRVAPETIFNA-KPGELFVV--RNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRC 105 (207)
Q Consensus 31 ~q~P~~~vit--C~DsRv~~~~i~~~-~~Gd~fv~--RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~C 105 (207)
+..|.++++- |++++.--..+-.. .-..+.++ |.-|.--.+.. ..........+...+..++.+.++++|||--
T Consensus 25 ~~~p~IillHG~~~s~~~~~~l~~~La~g~~Vi~~d~pG~G~S~~~~~-~~~~~~~a~~i~~~l~~l~~~~i~ivGhSmG 103 (207)
T 2wj6_A 25 TDGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVP-DFGYQEQVKDALEILDQLGVETFLPVSHSHG 103 (207)
T ss_dssp CSSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCCCC-CCCHHHHHHHHHHHHHHHTCCSEEEEEEGGG
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 999959998999889899999999982799899982899999999999-9999999999999999728887699974377
Q ss_pred HHHHHHH
Q ss_conf 8988753
Q gi|254780663|r 106 GGIQAVL 112 (207)
Q Consensus 106 Gav~aa~ 112 (207)
|.+...+
T Consensus 104 G~iAl~l 110 (207)
T 2wj6_A 104 GWVLVEL 110 (207)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 8999999
No 44
>>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A* (A:)
Probab=28.83 E-value=25 Score=15.34 Aligned_cols=16 Identities=6% Similarity=-0.056 Sum_probs=8.2
Q ss_pred CCCCEEEEEECCCCCC
Q ss_conf 8997599996267899
Q gi|254780663|r 31 QQKPKIMIISCCDSRV 46 (207)
Q Consensus 31 ~q~P~~~vitC~DsRv 46 (207)
...|.++++|=.++.=
T Consensus 36 ~~~~~i~iiG~~n~GK 51 (226)
T 2hf9_A 36 HGVVAFDFMGAIGSGK 51 (226)
T ss_dssp TTCEEEEEEESTTSSH
T ss_pred CCCEEEEEECCCCCCH
T ss_conf 5984999988999889
No 45
>>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} (A:)
Probab=28.62 E-value=36 Score=14.29 Aligned_cols=69 Identities=20% Similarity=0.316 Sum_probs=41.6
Q ss_pred ECCCCCCCHHHH--HCC--CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 626789988885--178--86624888624223457777753025788877672205766899981585389887530
Q gi|254780663|r 40 SCCDSRVAPETI--FNA--KPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 40 tC~DsRv~~~~i--~~~--~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
=+-.+|+.+... |.. .-+-+||.= .-...+ .+.-.+.++-||||-..|++.+|++|=+-+...-.+.+.
T Consensus 23 L~f~~rlte~~~~~W~~vl~~~~L~v~i-p~~~l~----~gsKesl~aLLE~Aee~L~c~~vvic~~k~r~dr~~L~r 95 (126)
T 1zo0_A 23 LSIQCTLTEAKQVTWRAVWNGGGLYIEL-PAGPLP----EGSKDSFAALLEFAEEQLRADHVFICFPKNREDRAALLR 95 (126)
T ss_dssp EEEEECCTTSCCEEEEEEEETTEEEEEC-SSCCCS----SCCSHHHHHHHHHHHHHHCCCCEEEEECCCSSCHHHHHH
T ss_pred EEEEEEECCCEEEEEEEEEECCEEEEEC-CCCCCC----CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH
T ss_conf 9999880556189999998288889988-876472----111889999999754323876899999788745888764
No 46
>>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} (A:)
Probab=28.25 E-value=37 Score=14.25 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 025788877672205766899981585389887530
Q gi|254780663|r 78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
.......++..+..++.+.++++|||-=|.+...+.
T Consensus 83 ~~~~a~~i~~~~~~l~~~~~~l~G~S~Gg~~a~~~a 118 (207)
T 3bdi_A 83 LKHAAEFIRDYLKANGVARSVIXGASXGGGXVIXTT 118 (207)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHH
T ss_conf 778877766402232223320023557858999999
No 47
>>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.0A {Escherichia coli} (A:1-90)
Probab=28.06 E-value=23 Score=15.54 Aligned_cols=19 Identities=47% Similarity=0.565 Sum_probs=14.0
Q ss_pred EECCCCCCCHHHHHCCCCCCEEEEEC
Q ss_conf 96267899888851788662488862
Q gi|254780663|r 39 ISCCDSRVAPETIFNAKPGELFVVRN 64 (207)
Q Consensus 39 itC~DsRv~~~~i~~~~~Gd~fv~Rn 64 (207)
==|.|||- ..+|++|+-.-
T Consensus 23 ~i~~DSR~-------v~~g~lFvAl~ 41 (90)
T 1e8c_A 23 EXTLDSRV-------AAAGDLFVAVV 41 (90)
T ss_dssp CEESCGGG-------CCTTCEEEECB
T ss_pred EEEEECCC-------CCCCCEEEECC
T ss_conf 49965882-------79997899816
No 48
>>2aiz_P Outer membrane protein P6; alpha-beta sandwich; HET: UDP AMU DGL 6CL DAL; NMR {Haemophilus influenzae} (P:)
Probab=26.98 E-value=37 Score=14.25 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf 3025788877672205766899981585389
Q gi|254780663|r 77 QHHATSAAIEFAVQGLNVEHIVVMGHGRCGG 107 (207)
Q Consensus 77 ~~~~~~~sle~av~~l~v~~iiV~GHt~CGa 107 (207)
.....+..+.-.+....-..|.|.||||..+
T Consensus 44 ~~~~~L~~~a~~l~~~p~~~i~I~Ghtd~~g 74 (134)
T 2aiz_P 44 EYVQILDAHAAYLNATPAAKVLVEGNTDERG 74 (134)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 8999999999999869984899973124343
No 49
>>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A (A:1-182)
Probab=26.82 E-value=24 Score=15.41 Aligned_cols=15 Identities=20% Similarity=0.386 Sum_probs=11.4
Q ss_pred CCCEEEEEECCCHHH
Q ss_conf 766899981585389
Q gi|254780663|r 93 NVEHIVVMGHGRCGG 107 (207)
Q Consensus 93 ~v~~iiV~GHt~CGa 107 (207)
+-+.|+++|+++||=
T Consensus 3 ~G~~i~liG~sGsGK 17 (182)
T 3a4m_A 3 DIMLIILTGLPGVGK 17 (182)
T ss_dssp CCEEEEEECCTTSSH
T ss_pred CCEEEEEECCCCCCH
T ss_conf 977998889999989
No 50
>>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} (A:58-108)
Probab=26.68 E-value=23 Score=15.58 Aligned_cols=17 Identities=18% Similarity=0.188 Sum_probs=13.1
Q ss_pred EEEEEECCCCEEEEEEC
Q ss_conf 99999889876999846
Q gi|254780663|r 181 HGAWFDISSGKLWILDP 197 (207)
Q Consensus 181 ~G~~yDi~tG~v~~l~~ 197 (207)
.=|+||++|+.+..+++
T Consensus 34 ~Y~iydi~t~~~~~l~~ 50 (51)
T 1z68_A 34 TYYIYDLSNGEFVRGNE 50 (51)
T ss_dssp EEEEEETTTTEECCSSC
T ss_pred EEEEEECCCCCEEECCC
T ss_conf 29999899996886677
No 51
>>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A* (A:)
Probab=26.45 E-value=26 Score=15.18 Aligned_cols=15 Identities=0% Similarity=0.069 Sum_probs=7.6
Q ss_pred CCCCEEEEEECCCCC
Q ss_conf 899759999626789
Q gi|254780663|r 31 QQKPKIMIISCCDSR 45 (207)
Q Consensus 31 ~q~P~~~vitC~DsR 45 (207)
...+.++++|=..+.
T Consensus 34 ~~~~~v~ivG~~~~G 48 (262)
T 3def_A 34 MNSMTVLVLGKGGVG 48 (262)
T ss_dssp CCEEEEEEEECTTSS
T ss_pred CCCCEEEEECCCCCC
T ss_conf 887389998999987
No 52
>>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A (A:1-168,A:240-278)
Probab=25.88 E-value=27 Score=15.09 Aligned_cols=21 Identities=5% Similarity=-0.084 Sum_probs=9.4
Q ss_pred HHHHHHHCCCCCEEEEEECCC
Q ss_conf 877672205766899981585
Q gi|254780663|r 84 AIEFAVQGLNVEHIVVMGHGR 104 (207)
Q Consensus 84 sle~av~~l~v~~iiV~GHt~ 104 (207)
.+...+...+++.|+|+=.-|
T Consensus 125 ~~~~~l~~~~iPiiVviNKiD 145 (207)
T 2h5e_A 125 KLMEVTRLRDTPILTFMNKLD 145 (207)
T ss_dssp HHHHHHTTTTCCEEEEEECTT
T ss_pred HHHHHHHHHCCCEEEEEEEEC
T ss_conf 889999862664376532104
No 53
>>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A (A:1-63)
Probab=25.79 E-value=41 Score=13.96 Aligned_cols=27 Identities=19% Similarity=0.294 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHCC--CCHHHHHHHHCCC
Q ss_conf 99999999997068--7988999862389
Q gi|254780663|r 6 NTLLERHREFIQDQ--YDKKLFQELANQQ 32 (207)
Q Consensus 6 ~~Ll~~N~~f~~~~--~~~~~~~~l~~~q 32 (207)
.+.++||+-|++.. ..|++.....+||
T Consensus 35 revlegnrywarkvtseepefmaeqvkgq 63 (63)
T 2w3q_A 35 REVLEGNRYWARKVTSEEPEFMAEQVKGQ 63 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHCCC
T ss_conf 99999999999750310978999863799
No 54
>>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell membrane, GTP-binding, ION transport; 2.50A {Legionella pneumophila} (A:1-169,A:253-256)
Probab=25.55 E-value=31 Score=14.70 Aligned_cols=11 Identities=36% Similarity=1.087 Sum_probs=4.2
Q ss_pred EEEEEECCCHH
Q ss_conf 89998158538
Q gi|254780663|r 96 HIVVMGHGRCG 106 (207)
Q Consensus 96 ~iiV~GHt~CG 106 (207)
.|+++||++||
T Consensus 3 kI~iiG~~~vG 13 (173)
T 3iby_A 3 HALLIGNPNCG 13 (173)
T ss_dssp EEEEEESTTSS
T ss_pred EEEEECCCCCC
T ss_conf 89998999968
No 55
>>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase; 2.10A {Mycobacterium tuberculosis} (A:1-50,A:103-207)
Probab=25.30 E-value=33 Score=14.55 Aligned_cols=20 Identities=15% Similarity=0.109 Sum_probs=15.0
Q ss_pred HHCCCCCEEEEEECCCHHHH
Q ss_conf 22057668999815853898
Q gi|254780663|r 89 VQGLNVEHIVVMGHGRCGGI 108 (207)
Q Consensus 89 v~~l~v~~iiV~GHt~CGav 108 (207)
+..-.-+.+.++|+|+||=-
T Consensus 15 ~~i~~g~~~~~~GpsG~GKs 34 (155)
T 1znw_A 15 QPAAVGRVVVLSGPSAVGKS 34 (155)
T ss_dssp ----CCCEEEEECSTTSSHH
T ss_pred CCCCCCCEEEEECCCCCCHH
T ss_conf 98878808999898999999
No 56
>>1zun_B Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae PV} (B:1-238)
Probab=24.80 E-value=30 Score=14.87 Aligned_cols=12 Identities=8% Similarity=0.166 Sum_probs=6.7
Q ss_pred EEEEEECCCCCC
Q ss_conf 599996267899
Q gi|254780663|r 35 KIMIISCCDSRV 46 (207)
Q Consensus 35 ~~~vitC~DsRv 46 (207)
-++++|..|+.=
T Consensus 26 ni~viGHvd~GK 37 (238)
T 1zun_B 26 RFLTCGNVDDGK 37 (238)
T ss_dssp EEEEECCTTSSH
T ss_pred EEEEEEECCCCH
T ss_conf 699995348208
No 57
>>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12} (A:)
Probab=24.70 E-value=43 Score=13.84 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf 25788877672205766899981585389
Q gi|254780663|r 79 HATSAAIEFAVQGLNVEHIVVMGHGRCGG 107 (207)
Q Consensus 79 ~~~~~sle~av~~l~v~~iiV~GHt~CGa 107 (207)
...+..|.--+....-..|.|.||||.-+
T Consensus 50 ~~~L~~ia~~L~~~p~~~i~I~Ghtd~~g 78 (149)
T 2k1s_A 50 ANTLTGVAMVLKEYPKTAVNVIGYTDSTG 78 (149)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHCCCCCCEEECCCCCCCC
T ss_conf 99999887777318875201022413544
No 58
>>1orv_A Dipeptidyl peptidase IV; serine protease, mechanism, oxyanion HOLE, substrate channeling, drug design, diabetes mellitus, hydrolase; HET: NAG BMA; 1.80A {Sus scrofa} (A:58-110)
Probab=24.38 E-value=27 Score=15.13 Aligned_cols=17 Identities=12% Similarity=0.167 Sum_probs=12.6
Q ss_pred EEEEEECCCCEEEEEEC
Q ss_conf 99999889876999846
Q gi|254780663|r 181 HGAWFDISSGKLWILDP 197 (207)
Q Consensus 181 ~G~~yDi~tG~v~~l~~ 197 (207)
.=|+||++||.+.-+++
T Consensus 36 ~Y~iydi~t~~~~~l~~ 52 (53)
T 1orv_A 36 SYDIYDLNKRQLITEER 52 (53)
T ss_dssp EEEEEETTTTEECCSSC
T ss_pred EEEEEECCCCCCCCCCC
T ss_conf 19999899997834557
No 59
>>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} (A:)
Probab=24.30 E-value=43 Score=13.79 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=21.1
Q ss_pred EEEEEECCCCEEEEEECCCCEEEECCC
Q ss_conf 999998898769998468882583359
Q gi|254780663|r 181 HGAWFDISSGKLWILDPTSNEFTCDTR 207 (207)
Q Consensus 181 ~G~~yDi~tG~v~~l~~~~~~F~~~~~ 207 (207)
|..=.-++.|.|.+|||..+.|++++.
T Consensus 132 Hava~~~~~~~vtfFDPNfGEF~~~s~ 158 (188)
T 1ukf_A 132 HAIACSCEGSQFKLFDPNLGEFQSSRS 158 (188)
T ss_dssp EEEEEEEETTEEEEEETTTEEEEEETT
T ss_pred EEEEEEECCCEEEEECCCCCCEECCHH
T ss_conf 279998669907998899872566706
No 60
>>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis} (A:1-167)
Probab=24.24 E-value=34 Score=14.49 Aligned_cols=15 Identities=13% Similarity=0.346 Sum_probs=10.9
Q ss_pred CCCEEEEEECCCHHH
Q ss_conf 766899981585389
Q gi|254780663|r 93 NVEHIVVMGHGRCGG 107 (207)
Q Consensus 93 ~v~~iiV~GHt~CGa 107 (207)
|-+.|+++|+++||=
T Consensus 2 ~k~~I~iiG~~nvGK 16 (167)
T 2hjg_A 2 GKPVVAIVGRPNVGK 16 (167)
T ss_dssp -CCEEEEECSTTSSH
T ss_pred CCCEEEEECCCCCCH
T ss_conf 989999998999989
No 61
>>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein/lipoprotein complex; 1.50A {Escherichia coli} (H:)
Probab=23.81 E-value=44 Score=13.73 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=21.1
Q ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf 753025788877672205766899981585389
Q gi|254780663|r 75 DGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG 107 (207)
Q Consensus 75 ~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa 107 (207)
.......+..+.-.+....--.|.|.||||+.+
T Consensus 18 ~~~~~~~L~~ia~~l~~~p~~~i~I~Ghtd~~g 50 (118)
T 2hqs_H 18 RSDFAQMLDAHANFLRSNPSYKVTVEGHADERG 50 (118)
T ss_dssp CGGGHHHHHHHHHHHHHCTTCCEEEEECCCSSS
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 988999999999999769994899984233232
No 62
>>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A (A:1-173)
Probab=23.57 E-value=28 Score=15.04 Aligned_cols=11 Identities=18% Similarity=0.471 Sum_probs=5.3
Q ss_pred EEEEEECCCHH
Q ss_conf 89998158538
Q gi|254780663|r 96 HIVVMGHGRCG 106 (207)
Q Consensus 96 ~iiV~GHt~CG 106 (207)
.|+++||++||
T Consensus 7 ki~iiG~~~vG 17 (173)
T 3a1s_A 7 KVALAGCPNVG 17 (173)
T ss_dssp EEEEECCTTSS
T ss_pred EEEEECCCCCC
T ss_conf 89999999998
No 63
>>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} (A:1-221,A:270-352)
Probab=23.26 E-value=31 Score=14.70 Aligned_cols=66 Identities=11% Similarity=0.092 Sum_probs=32.8
Q ss_pred CCCEEEEEECCCC-CCCHHHHHCCCCCCEEE--EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf 9975999962678-99888851788662488--8624223457777753025788877672205766899981585389
Q gi|254780663|r 32 QKPKIMIISCCDS-RVAPETIFNAKPGELFV--VRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG 107 (207)
Q Consensus 32 q~P~~~vitC~Ds-Rv~~~~i~~~~~Gd~fv--~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa 107 (207)
+..++-++-|--- ....+.+.++..-|.-+ +--..++- .-...+-..+...+.+.|+++=.-|.-.
T Consensus 96 ~~~~i~iiDtPGH~dF~~~~~~~l~~~D~ailVIdA~~Gv~----------~qT~~~l~~~~~~~~p~IV~INKiD~~~ 164 (304)
T 1n0u_A 96 NSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVC----------VQTETVLRQALGERIKPVVVINKVDRAL 164 (304)
T ss_dssp SEEEEEEECCCCCCSSCHHHHHHHHTCSEEEEEEETTTBSC----------HHHHHHHHHHHHTTCEEEEEEECHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCC----------HHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 87599998599962259999999998785899996899946----------8699999999875989699997974699
No 64
>>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} (A:)
Probab=23.18 E-value=46 Score=13.65 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=35.3
Q ss_pred CEEEEECCCC--CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 2488862422--3457777753025788877672205766899981585389887530
Q gi|254780663|r 58 ELFVVRNVAN--IVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 58 d~fv~RnaGn--~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
.++.+--.|. --.+.............++.-+..++.+.++++|||-=|.+...+.
T Consensus 95 ~v~~~D~~G~G~S~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a 152 (306)
T 2r11_A 95 RTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDNLGIEKSHXIGLSLGGLHTXNFL 152 (306)
T ss_dssp EEEEECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 8999857645566544666788999988764122343102210012332323320234
No 65
>>2zf8_A MOTY, component of sodium-driven polar flagellar motor; beta barrel, 2-layer sandwich, flagellum, structural protein; 2.85A {Vibrio alginolyticus} (A:155-278)
Probab=22.84 E-value=46 Score=13.61 Aligned_cols=15 Identities=7% Similarity=0.182 Sum_probs=12.5
Q ss_pred CCCEEEEEECCCHHH
Q ss_conf 766899981585389
Q gi|254780663|r 93 NVEHIVVMGHGRCGG 107 (207)
Q Consensus 93 ~v~~iiV~GHt~CGa 107 (207)
+.+.|.|.||||..+
T Consensus 39 ~~~~I~I~Ghtd~~g 53 (124)
T 2zf8_A 39 DIDLVLVATYTDSTD 53 (124)
T ss_dssp SCCEEEEEEC-----
T ss_pred CCCEEEEEEECCCCC
T ss_conf 965899998748999
No 66
>>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} (A:1-88,A:178-264)
Probab=22.30 E-value=33 Score=14.54 Aligned_cols=86 Identities=14% Similarity=0.028 Sum_probs=37.6
Q ss_pred CEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH--CCHHHHHH
Q ss_conf 6899981585389887530000134633101468988889999864016324687999999999999973--09788999
Q gi|254780663|r 95 EHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIR--NFPFVNKL 172 (207)
Q Consensus 95 ~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~--~~p~i~~~ 172 (207)
-.|.+++|+.+= .+.-.-...+......++....+..... .+............++... ....|+++
T Consensus 4 i~v~~v~HsH~D----------~g~w~~~~ee~~~k~~~~~l~ll~~~p~-~kF~~~~s~~llew~~~~~Pe~~~~lk~l 72 (175)
T 1k1x_A 4 INFIFGIHNHQP----------LGNFGWVFEEAYNRSYRPFMEILEEFPE-MKVNVHFSGPLLEWIEENKPDYLDLLRSL 72 (175)
T ss_dssp EEEEEEEEECCC----------TTCCHHHHHHHHHHTHHHHHHHHTTCTT-CCEEEEECHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEEEEEEECCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEECHHHHHHHHHHCHHHHHHHHHH
T ss_conf 999999976789----------9877389999999999999999985899-61999927999999997698999999999
Q ss_pred HHCCCCEEEEEEEECCCCE
Q ss_conf 9779967999999889876
Q gi|254780663|r 173 EKEHMLQIHGAWFDISSGK 191 (207)
Q Consensus 173 v~~g~l~I~G~~yDi~tG~ 191 (207)
+++|++.+.|..|--.+..
T Consensus 73 v~~Gr~Eivgg~~ve~~~~ 91 (175)
T 1k1x_A 73 IKRGQLEIVVAGFYEPDEK 91 (175)
T ss_dssp HHTTCEEEEBCCTTCCCHH
T ss_pred HHCCCEEEECCCCCCCCHH
T ss_conf 9879989987764022721
No 67
>>1dar_A EF-G, elongation factor G; ribosomal translocase, translational GTPase; HET: GDP; 2.40A {Thermus thermophilus HB8} (A:1-283)
Probab=22.15 E-value=33 Score=14.55 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=31.2
Q ss_pred CCEEEEEECCCCCC-CHHHHHCCC--CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf 97599996267899-888851788--6624888624223457777753025788877672205766899981585389
Q gi|254780663|r 33 KPKIMIISCCDSRV-APETIFNAK--PGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG 107 (207)
Q Consensus 33 ~P~~~vitC~DsRv-~~~~i~~~~--~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa 107 (207)
..++.++-|--.+- ..+...++. -|=+||+--..++- .....+.......+.+.|+|+=.-|+-.
T Consensus 76 ~~~~~~iDtPGh~df~~~~~~~l~~~D~ailVvda~~G~~----------~qt~~~~~~~~~~~~p~ii~iNKiD~~~ 143 (283)
T 1dar_A 76 DHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVE----------PQSETVWRQAEKYKVPRIAFANKMDKTG 143 (283)
T ss_dssp TEEEEEECCCSSTTCHHHHHHHHHHCSEEEEEEETTTCSC----------HHHHHHHHHHHHTTCCEEEEEECTTSTT
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCC----------HHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 9899999298965318999999987186899997898862----------7799999999974998499986346455
No 68
>>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis} (A:168-353)
Probab=22.02 E-value=36 Score=14.29 Aligned_cols=11 Identities=18% Similarity=0.576 Sum_probs=4.1
Q ss_pred EEEEEECCCHH
Q ss_conf 89998158538
Q gi|254780663|r 96 HIVVMGHGRCG 106 (207)
Q Consensus 96 ~iiV~GHt~CG 106 (207)
.|+++||+++|
T Consensus 10 ~v~iiG~~~vG 20 (186)
T 2hjg_A 10 QFCLIGRPNVG 20 (186)
T ss_dssp EEEEECSTTSS
T ss_pred EEEEECCCCCC
T ss_conf 79998799988
No 69
>>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A* (A:)
Probab=21.99 E-value=36 Score=14.34 Aligned_cols=12 Identities=25% Similarity=0.534 Sum_probs=7.3
Q ss_pred CEEEEEECCCHH
Q ss_conf 689998158538
Q gi|254780663|r 95 EHIVVMGHGRCG 106 (207)
Q Consensus 95 ~~iiV~GHt~CG 106 (207)
-.|+++||++||
T Consensus 4 ~kv~iiG~~~vG 15 (165)
T 2wji_A 4 YEIALIGNPNVG 15 (165)
T ss_dssp EEEEEECSTTSS
T ss_pred EEEEEECCCCCC
T ss_conf 199999899998
No 70
>>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* (A:172-364)
Probab=21.90 E-value=40 Score=14.00 Aligned_cols=12 Identities=33% Similarity=0.504 Sum_probs=5.3
Q ss_pred CEEEEEECCCCC
Q ss_conf 759999626789
Q gi|254780663|r 34 PKIMIISCCDSR 45 (207)
Q Consensus 34 P~~~vitC~DsR 45 (207)
+.++++|.+++.
T Consensus 9 ~~V~iiG~~~vG 20 (193)
T 2qtf_A 9 PSIGIVGYTNSG 20 (193)
T ss_dssp CEEEEECBTTSS
T ss_pred CEEEEEECCCCH
T ss_conf 669998345401
No 71
>>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} (A:)
Probab=21.65 E-value=49 Score=13.45 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 025788877672205766899981585389887530
Q gi|254780663|r 78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD 113 (207)
Q Consensus 78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~ 113 (207)
.......+...+..++.+.++++|||-.|++...+.
T Consensus 117 ~~~~~~~~~~~l~~l~~~~~~lvG~S~Gg~~a~~~a 152 (300)
T 1kez_A 117 AAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALA 152 (300)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEECCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
T ss_conf 999999999999857999889999774079999999
No 72
>>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens} (A:)
Probab=21.41 E-value=49 Score=13.42 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=21.1
Q ss_pred CCEEEEEEEECCCCEEEEEECCCC
Q ss_conf 967999999889876999846888
Q gi|254780663|r 177 MLQIHGAWFDISSGKLWILDPTSN 200 (207)
Q Consensus 177 ~l~I~G~~yDi~tG~v~~l~~~~~ 200 (207)
....+|...|.+.|.|.|+|.+++
T Consensus 132 ~~~rvGV~LD~e~G~lsFy~v~~~ 155 (193)
T 3kb5_A 132 RPTRIGLYLSFGDGVLSFYDASDA 155 (193)
T ss_dssp CCSEEEEEEETTTTEEEEEECCST
T ss_pred CCCEEEEEEECCCCEEEEEECCCC
T ss_conf 988999998778999999957588
No 73
>>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} (A:1-277)
Probab=21.32 E-value=38 Score=14.14 Aligned_cols=13 Identities=8% Similarity=0.041 Sum_probs=5.7
Q ss_pred EEEEECCCCCCCH
Q ss_conf 9999626789988
Q gi|254780663|r 36 IMIISCCDSRVAP 48 (207)
Q Consensus 36 ~~vitC~DsRv~~ 48 (207)
++|+.|.+...+.
T Consensus 102 ilVvda~~g~~~q 114 (277)
T 2dy1_A 102 LVAVSAEAGVQVG 114 (277)
T ss_dssp EEEEETTTCSCHH
T ss_pred EEEEECCCCCCHH
T ss_conf 9999789886277
No 74
>>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} (A:332-428,A:499-582)
Probab=21.29 E-value=43 Score=13.84 Aligned_cols=106 Identities=6% Similarity=0.063 Sum_probs=46.6
Q ss_pred HCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC-CC--CHH-HHHH--HHHHHHHH-------------HHHCCCHHHHHH
Q ss_conf 20576689998158538988753000013463-31--014-6898--88899998-------------640163246879
Q gi|254780663|r 90 QGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSP-GD--FIG-KWMD--IVRPIAQK-------------IVANNPTEKQTI 150 (207)
Q Consensus 90 ~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~-~~--~~~-~~~~--~~~~~~~~-------------~~~~~~~~~~~~ 150 (207)
..-.-+.+.|+|+++||=-+.+ ........+ .+ ++. .-+. ..+..... +--+.|....+.
T Consensus 34 ~i~~Ge~vaivG~sGsGKSTll-~~l~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LP~ililDEPts~LD~ 112 (181)
T 3b60_A 34 KIPAGKTVALVGRSGSGKSTIA-SLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLSPILILDEATSALDT 112 (181)
T ss_dssp EECTTCEEEEEECTTSSHHHHH-HHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSEEEEETTTSSCCH
T ss_pred EECCCEEEEEECCCCCCHHHHH-HHHHCCCCCCCEEEEECCEECCCCCHHHHHHHEEEEECCCEECCEEEEECCCCCCCH
T ss_conf 9837859999899998799999-998177668970899999984408999997438999257875998999797557998
Q ss_pred HHHHHHHHHHHHHHCC-HHH--HHHHHCCCCEEEEEEEECCCCEEEEEECC
Q ss_conf 9999999999997309-788--99997799679999998898769998468
Q gi|254780663|r 151 LEQLSIRNSLKNIRNF-PFV--NKLEKEHMLQIHGAWFDISSGKLWILDPT 198 (207)
Q Consensus 151 l~~~nV~~~v~~L~~~-p~i--~~~v~~g~l~I~G~~yDi~tG~v~~l~~~ 198 (207)
..+..+.+.+..+.+. .+| .-.+. .+...--++-++.|++.....-
T Consensus 113 ~~~~~i~~~l~~l~~~~Tvi~vtH~l~--~~~~~Dri~vl~~G~i~~~g~~ 161 (181)
T 3b60_A 113 ESERAIQAALDELQKNRTSLVIAHRLS--TIEQADEIVVVEDGIIVERGTH 161 (181)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEECSCGG--GTTTCSEEEEEETTEEEEEECH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCHH--HHHHCCEEEEEECCEEEEECCH
T ss_conf 999999999999759998999928999--9986999999989999998788
No 75
>>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome assembly, GTP-binding; HET: GNP; 1.90A {Aquifex aeolicus} (A:1-190,A:295-308)
Probab=20.51 E-value=35 Score=14.37 Aligned_cols=25 Identities=20% Similarity=0.053 Sum_probs=15.1
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf 8887767220576689998158538
Q gi|254780663|r 82 SAAIEFAVQGLNVEHIVVMGHGRCG 106 (207)
Q Consensus 82 ~~sle~av~~l~v~~iiV~GHt~CG 106 (207)
...+++.....+.+.++|+-..|-.
T Consensus 111 ~~~~~~~~~~~~~~~i~v~nK~D~~ 135 (204)
T 3iev_A 111 EEIYQNFIKPLNKPVIVVINKIDKI 135 (204)
T ss_dssp HHHHHHHTGGGCCCEEEEEECGGGS
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 8999999998399889999701444
No 76
>>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} (A:)
Probab=20.37 E-value=43 Score=13.79 Aligned_cols=14 Identities=21% Similarity=0.432 Sum_probs=9.9
Q ss_pred CCEEEEEECCCHHH
Q ss_conf 66899981585389
Q gi|254780663|r 94 VEHIVVMGHGRCGG 107 (207)
Q Consensus 94 v~~iiV~GHt~CGa 107 (207)
...|+++||+++|=
T Consensus 4 ~~kI~iiG~~~vGK 17 (172)
T 2gj8_A 4 GXKVVIAGRPNAGK 17 (172)
T ss_dssp CEEEEEEESTTSSH
T ss_pred CCEEEEECCCCCCH
T ss_conf 76899999999989
No 77
>>1gg4_A UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase...; alpha/beta sheet; 2.30A {Escherichia coli} (A:1-81)
Probab=20.34 E-value=40 Score=13.99 Aligned_cols=20 Identities=35% Similarity=0.481 Sum_probs=14.2
Q ss_pred EECCCCCCCHHHHHCCCCCCEEEEECC
Q ss_conf 962678998888517886624888624
Q gi|254780663|r 39 ISCCDSRVAPETIFNAKPGELFVVRNV 65 (207)
Q Consensus 39 itC~DsRv~~~~i~~~~~Gd~fv~Rna 65 (207)
==|.||| ...+|++|+-..-
T Consensus 26 ~i~~DSR-------~v~~g~lFval~G 45 (81)
T 1gg4_A 26 AVTTDTR-------KLTPGCLFVALKG 45 (81)
T ss_dssp CEESCGG-------GCCTTCEEECCBC
T ss_pred EEEECCC-------CCCCCCEEEEECC
T ss_conf 4796267-------7788989999377
No 78
>>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} (A:69-265)
Probab=20.13 E-value=45 Score=13.72 Aligned_cols=62 Identities=10% Similarity=0.093 Sum_probs=33.0
Q ss_pred CEEEEEECCCC---CCC-HHHHHC--CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf 75999962678---998-888517--8866248886242234577777530257888776722057668999815853
Q gi|254780663|r 34 PKIMIISCCDS---RVA-PETIFN--AKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRC 105 (207)
Q Consensus 34 P~~~vitC~Ds---Rv~-~~~i~~--~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~C 105 (207)
+.+.++-+..- .-. .+.+.. ..-++++++......- ....-..--+...+.+.|+|+-+-|.
T Consensus 52 ~~i~liDTPG~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~----------~~~~~~~~~l~~~~~p~ivv~NK~D~ 119 (197)
T 1tq4_A 52 PNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFK----------KNDIDIAKAISMMKKEFYFVRTKVDS 119 (197)
T ss_dssp TTEEEEECCCGGGSSCCHHHHHHHTTGGGCSEEEEEESSCCC----------HHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCC----------HHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 876999788887444349999998775417689997588887----------78999999999739988999758764
No 79
>>1l2t_A Hypothetical ABC transporter ATP-binding protein MJ0796; ABC transporters, ATPase, walker-A, NBD, transport protein; HET: ATP; 1.90A {Methanocaldococcus jannaschii} (A:)
Probab=20.03 E-value=44 Score=13.73 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=10.1
Q ss_pred CCCCEEEEEECCCHHH
Q ss_conf 5766899981585389
Q gi|254780663|r 92 LNVEHIVVMGHGRCGG 107 (207)
Q Consensus 92 l~v~~iiV~GHt~CGa 107 (207)
-.-+.+.|+|+|+||=
T Consensus 29 ~~Ge~vaiiGpSGsGK 44 (235)
T 1l2t_A 29 KEGEFVSIMGPSGSGK 44 (235)
T ss_dssp CTTCEEEEECSTTSSH
T ss_pred CCCCEEEEECCCCCCH
T ss_conf 7998999999999819
Done!