RPSBLAST alignment of GI: 254780663 and protein with PDBid: 1ddz
>1ddz_A Carbonic anhydrase; alpha-beta-alpha; 2.20A {Porphyridium cruentum} SCOP: c.53.2.1 c.53.2.1 Length = 496
Score = 194 bits (495), Expect = 9e-51
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 6 NTLLERHREFIQDQY--DKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVR 63
N + + + Q D + F LA+ Q P+I+ I C DSRV I N GE+FV R
Sbjct: 291 NRVFVNNENWRQKMLKQDPQFFSNLAHTQTPEILWIGCADSRVPANQIINLPAGEVFVHR 350
Query: 64 NVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGD 123
N+AN + + + +++AVQ L V+ +VV GH CGG A L +
Sbjct: 351 NIANQCIHSD-----MSFLSVLQYAVQYLKVKRVVVCGHYACGGCAAALGDSRL-----G 400
Query: 124 FIGKWMDIVRPIAQKIVAN-----NPTEKQTILEQLSIRNSLKNIRNFPFV-NKLEKEHM 177
I W+ +R + + A +P + L ++++ + N+ V + +
Sbjct: 401 LIDNWLRHIRDVRRHNQAELSRITDPKDSLNRLIEINVLEQMHNVCATSIVQDAWDAGQE 460
Query: 178 LQIHGAWFDISSGKLWILDPTSNEF 202
L++ G + + GKL + +
Sbjct: 461 LEVQGVVYGVGDGKLRDMGVVAKAN 485