HHsearch alignment of GI: 254780664 and MMDB domain: 2yvq_A_
>2yvq_A (A:) Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=99.17 E-value=1.1e-13 Score=119.50 Aligned_cols=124 Identities=23% Similarity=0.254 Sum_probs=95.5
Q ss_pred CCCCCCCEEEEEEEEEC--CCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCEEEHHHHCCCCHHCCCCCCCCCCHHHH
Q ss_conf 88677613698998754--5686999999998799999942768999988995179465348816519855323715553
Q gi|254780664|r 9 GDHGEIAVKTALISVHN--KTGVVEFASRLLSRGIKIISTGGTCQLLEEEGIPVTSVFDITKFPEIMGGRVKTLHPKIYG 86 (536)
Q Consensus 9 ~~~~~~~ikrALiSV~d--Ktgl~~la~~L~~~g~~iisTgGTa~~l~~~gi~v~~Vs~~TgfpEil~GRVKTLHP~I~g 86 (536)
....++|-+..|+||+| |+.+.++++.|+++||+|++|+||+++|+++|+++..|.. .+++..+|++++||+.|..
T Consensus 17 ~~~~~lp~~gvlisv~d~~K~~l~~~a~~l~~~G~~i~AT~gT~~~l~~~Gi~~~~v~~--~~~~~~~~~~~~i~~~i~~ 94 (143)
T 2yvq_A 17 STGFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEATSDWLNANNVPATPVAW--PSQEGQNPSLSSIRKLIRD 94 (143)
T ss_dssp SCSCCCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHHHHHHHHTTCCCEEECC--GGGC-----CBCHHHHHHT
T ss_pred HCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCCCCCEEEEE--ECCCCCCCCCCCHHHHHHH
T ss_conf 75999899878999863444568899999975071467438989999854588669843--0236766674338889870
Q ss_pred HHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECHHHHHHH
Q ss_conf 55330889899999997799841499994888899731765311232002334346999874015631353089998988
Q gi|254780664|r 87 GILSIRDNPAHMKFMQDHELESIDLVVVNLYPFEESFCREDDYYTMVENIDIGGPSMIRAAAKNHDYVTILTNPQDYPLF 166 (536)
Q Consensus 87 gIL~~r~~~~~~~~l~~~~i~~IDlVvvNLYPF~~~v~~~~~~~~~IEnIDIGGpsmiRAAAKN~~~V~Vi~dp~dY~~~ 166 (536)
|. ||+|+-.-.. .. .-.--|-.|.|+|..| +|..+|+++-=..+
T Consensus 95 g~--------------------i~~Vin~~~~-------~~-------~~~~d~~~iRr~av~~--~iP~~T~~~tA~~~ 138 (143)
T 2yvq_A 95 GS--------------------IDLVINLPNN-------NT-------KFVHDNYVIRRTAVDS--GIPLLTNFQVTKLF 138 (143)
T ss_dssp TS--------------------CCEEEECCCC-------CG-------GGHHHHHHHHHHHHHT--TCCEECSHHHHHHH
T ss_pred CC--------------------EEEEEECCCC-------CC-------CCCCCHHHHHHHHHHC--CCCEEECHHHHHHH
T ss_conf 72--------------------4799978889-------86-------6556579999999976--99988589999999
Q ss_pred HHHH
Q ss_conf 9875
Q gi|254780664|r 167 LAEM 170 (536)
Q Consensus 167 ~~el 170 (536)
++.|
T Consensus 139 ~~~l 142 (143)
T 2yvq_A 139 AEAV 142 (143)
T ss_dssp HHTC
T ss_pred HHHH
T ss_conf 9975