HHsearch results for GI: 254780664 and protein with PDBid: 2q5c_A
>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=91.78 E-value=0.13 Score=30.80 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=63.9
Q ss_pred HHHHHHHHHCCCE-EEEEHHHHHHHHHC-CCCEEEHHHHCCCCHHCC--CCCCCCCCHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf 9999999987999-99942768999988-995179465348816519--8553237155535533088989999999779
Q gi|254780664|r 30 VEFASRLLSRGIK-IISTGGTCQLLEEE-GIPVTSVFDITKFPEIMG--GRVKTLHPKIYGGILSIRDNPAHMKFMQDHE 105 (536)
Q Consensus 30 ~~la~~L~~~g~~-iisTgGTa~~l~~~-gi~v~~Vs~~TgfpEil~--GRVKTLHP~I~ggIL~~r~~~~~~~~l~~~~ 105 (536)
.++|+.|.+ |++ |||-||||++|+++ .+||.++. +|+|. ||. -+.|-.+++| |+..-.+.....+.+.++
T Consensus 42 ~~iA~~l~~-~~DVIISRGgTa~~Ir~~~~iPVVeI~-vs~~D-il~al~~a~~~~~ki--avvgf~~~~~~~~~i~~l- 115 (196)
T 2q5c_A 42 SKIAFGLQD-EVDAIISRGATSDYIKKSVSIPSISIK-VTRFD-TMRAVYNAKRFGNEL--ALIAYKHSIVDKHEIEAM- 115 (196)
T ss_dssp HHHHHHHTT-TCSEEEEEHHHHHHHHTTCSSCEEEEC-CCHHH-HHHHHHHHGGGCSEE--EEEEESSCSSCHHHHHHH-
T ss_pred HHHHHHHHC-CCCEEEECCHHHHHHHHHCCCCEEEEC-CCHHH-HHHHHHHHHHHCCCE--EEEECCCCCHHHHHHHHH-
T ss_conf 999997543-987999896589999982899779980-78879-999999999758978--999678501589999998-
Q ss_pred CCCEEEEEEECCCHHHHHCCCC-CHHHHHHCCCCCCHHHHHHHHCCCC-CCEEEECHHHHHHHH
Q ss_conf 9841499994888899731765-3112320023343469998740156-313530899989889
Q gi|254780664|r 106 LESIDLVVVNLYPFEESFCRED-DYYTMVENIDIGGPSMIRAAAKNHD-YVTILTNPQDYPLFL 167 (536)
Q Consensus 106 i~~IDlVvvNLYPF~~~v~~~~-~~~~~IEnIDIGGpsmiRAAAKN~~-~V~Vi~dp~dY~~~~ 167 (536)
-.+++...-+..-++.-..=. -.++-++-| |||....+.|.|.-- .+.+-+.++--...+
T Consensus 116 -l~~~i~~~~~~~~~e~~~~i~~l~~~G~~vv-VG~~~~~~~A~~~Gl~~ili~Sg~eSI~~Al 177 (196)
T 2q5c_A 116 -LGVKIKEFLFSSEDEITTLISKVKTENIKIV-VSGKTVTDEAIKQGLYGETINSGEESLRRAI 177 (196)
T ss_dssp -HTCEEEEEEECSGGGHHHHHHHHHHTTCCEE-EECHHHHHHHHHTTCEEEECCCCHHHHHHHH
T ss_pred -HCCCEEEEEECCHHHHHHHHHHHHHCCCCEE-ECCHHHHHHHHHCCCCEEEEECCHHHHHHHH
T ss_conf -5995599996688999999999998699899-9987999999985997899965499999999