HHSEARCH alignment of GI: 254780664 and SCOP domain: d1vmda_

Alignment
>d1vmda_ c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Thermotoga maritima [TaxId: 2336]}
Probab=97.66  E-value=1.1e-05  Score=58.56  Aligned_cols=118  Identities=23%  Similarity=0.344  Sum_probs=78.2

Q ss_pred             EEEEEE-EECCCCHHHHHHHHHHC--CCEEEEEHHHHHHHHHC-CCCEEEHHHHCCCCHHCCCCCCCCCCHHHHHHHHCC
Q ss_conf             698998-75456869999999987--99999942768999988-995179465348816519855323715553553308
Q gi|254780664|r   17 KTALIS-VHNKTGVVEFASRLLSR--GIKIISTGGTCQLLEEE-GIPVTSVFDITKFPEIMGGRVKTLHPKIYGGILSIR   92 (536)
Q Consensus        17 krALiS-V~dKtgl~~la~~L~~~--g~~iisTgGTa~~l~~~-gi~v~~Vs~~TgfpEil~GRVKTLHP~I~ggIL~~r   92 (536)
                      +-|||+ =.||..+++||+.+.++  ||+|++|+||+++|+++ |++++.|...   |  .||     +|.         
T Consensus        13 ~ialIAhD~dK~~~v~~a~~~~~ll~Gf~l~AT~GTa~~L~e~~g~~v~~v~k~---~--~gg-----~p~---------   73 (156)
T d1vmda_          13 RIALIAHDRRKRDLLEWVSFNLGTLSKHELYATGTTGALLQEKLGLKVHRLKSG---P--LGG-----DQQ---------   73 (156)
T ss_dssp             EEEEEECGGGHHHHHHHHHHSHHHHTTSEEEECHHHHHHHHHHHCCCCEECSCG---G--GTH-----HHH---------
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCEEEEEEEC---C--CCC-----CCC---------
T ss_conf             357885105649999999999998559869985358999987139705999857---8--788-----988---------


Q ss_pred             CCHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHC
Q ss_conf             89899999997799841499994888899731765311232002334346999874015631353089998988987530
Q gi|254780664|r   93 DNPAHMKFMQDHELESIDLVVVNLYPFEESFCREDDYYTMVENIDIGGPSMIRAAAKNHDYVTILTNPQDYPLFLAEMDV  172 (536)
Q Consensus        93 ~~~~~~~~l~~~~i~~IDlVvvNLYPF~~~v~~~~~~~~~IEnIDIGGpsmiRAAAKN~~~V~Vi~dp~dY~~~~~el~~  172 (536)
                           +.++=..  ..||+||.=-=|-.    .....        --|-.+.|+|--  .+|.++|+..-=..+++.+..
T Consensus        74 -----i~d~I~~--geI~lVIn~~d~~~----~~~~~--------~D~~~IRR~a~~--~~IP~~Ttl~~A~a~i~ai~~  132 (156)
T d1vmda_          74 -----IGAMIAE--GKIDVLIFFWDPLE----PQAHD--------VDVKALIRIATV--YNIPVAITRSTADFLISSPLM  132 (156)
T ss_dssp             -----HHHHHHT--TSCCEEEEECCSSS----CCTTS--------CCHHHHHHHHHH--TTCCEESSHHHHHHHHHSGGG
T ss_pred             -----HHHHHHC--CCCCEEEECCCCCC----CCCCC--------CHHHHHHHHHHH--HCCCEECCHHHHHHHHHHHHH
T ss_conf             -----9999976--99878997778777----76554--------249999999998--398424279999999987984


Q ss_pred             CC
Q ss_conf             23
Q gi|254780664|r  173 NN  174 (536)
Q Consensus       173 ~~  174 (536)
                      ..
T Consensus       133 ~~  134 (156)
T d1vmda_         133 ND  134 (156)
T ss_dssp             GS
T ss_pred             CC
T ss_conf             67


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Methylglyoxal synthase-like
superfamily: Methylglyoxal synthase-like
family: Methylglyoxal synthase, MgsA
domain: Methylglyoxal synthase, MgsA
species: Thermotoga maritima [TaxId: 2336]