HHsearch alignment for GI: 254780666 and conserved domain: COG2226
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].
Probab=98.69 E-value=2.8e-08 Score=81.15 Aligned_cols=117 Identities=28% Similarity=0.335 Sum_probs=91.6
Q ss_pred CCCCCCCCCEECCCCCCCCCEEEECCC--CCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCCCCEEEE
Q ss_conf 356321331003556447000010256--84100010596798776544320488741772077445774-344766896
Q gi|254780666|r 236 LFGTLNNLSVLDLCAAPGGKTAQLIVS--GAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCP-KKLFDAVLV 312 (445)
Q Consensus 236 ~l~~~~g~~VLD~CAAPGGKT~~l~~~--~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~-~~~fD~iLl 312 (445)
T Consensus 46 ~~~~~~g~~vLDva~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~ 125 (238)
T COG2226 46 LLGIKPGDKVLDVACGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTI 125 (238)
T ss_pred HHCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCCCCCEEEE
T ss_conf 60789998799966873199999999658844999979999999999874324766327997056549888876588986
Q ss_pred CCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHH
Q ss_conf 1674211001101103332886677889999999999999860898289997747883439998
Q gi|254780666|r 313 DAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEV 376 (445)
Q Consensus 313 DaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~v 376 (445)
T Consensus 126 ~f---g---lrnv~---------d~-------~~aL~E~~RVlKpgG~~--~vle~~~p~~~~~ 165 (238)
T COG2226 126 SF---G---LRNVT---------DI-------DKALKEMYRVLKPGGRL--LVLEFSKPDNPVL 165 (238)
T ss_pred EE---H---HHCCC---------CH-------HHHHHHHHHHHCCCEEE--EEEECCCCCCCHH
T ss_conf 51---2---35278---------78-------99999998762687499--9987689986016