HHsearch alignment for GI: 254780666 and conserved domain: COG2518
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].
Probab=98.04 E-value=3e-06 Score=66.13 Aligned_cols=105 Identities=23% Similarity=0.298 Sum_probs=87.9
Q ss_pred CCCCCCCCCCCEECCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCCCCEEEE
Q ss_conf 2235632133100355644700001025684100010596798776544320488741772077445774-344766896
Q gi|254780666|r 234 VQLFGTLNNLSVLDLCAAPGGKTAQLIVSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCP-KKLFDAVLV 312 (445)
Q Consensus 234 ~~~l~~~~g~~VLD~CAAPGGKT~~l~~~~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~-~~~fD~iLl 312 (445)
T Consensus 65 ~~~L~~~~g~~VLEIGtGsGY~aAvla~l~~~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD~I~V 144 (209)
T COG2518 65 LQLLELKPGDRVLEIGTGSGYQAAVLARLVGRVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYDRIIV 144 (209)
T ss_pred HHHHCCCCCCEEEEECCCCHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEE
T ss_conf 99748999986888777830999999997484999997199999999999976987349997885568877798478999
Q ss_pred CCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 167421100110110333288667788999999999999986089828999774
Q gi|254780666|r 313 DAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNC 366 (445)
Q Consensus 313 DaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTC 366 (445)
T Consensus 145 taaa~~v------P~--------~--------------Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 145 TAAAPEV------PE--------A--------------LLDQLKPGGRLVIPVG 170 (209)
T ss_pred EECCCCC------CH--------H--------------HHHHCCCCCEEEEEEC
T ss_conf 5035779------98--------9--------------9985065988999985