HHsearch alignment for GI: 254780666 and conserved domain: COG3963

Probab=90.88  E-value=0.53  Score=27.18  Aligned_cols=108  Identities=23%  Similarity=0.263  Sum_probs=77.7

Q ss_pred             CCCCCCCCCCEECCCCCCCCCEEEECCC---CCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC------CCC
Q ss_conf             2356321331003556447000010256---8410001059679877654432048874177207744577------434
Q gi|254780666|r  235 QLFGTLNNLSVLDLCAAPGGKTAQLIVS---GAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYC------PKK  305 (445)
Q Consensus       235 ~~l~~~~g~~VLD~CAAPGGKT~~l~~~---~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~------~~~  305 (445)
T Consensus        42 s~I~pesglpVlElGPGTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~-----p~~~ii~gda~~l~~~l~e~~gq  116 (194)
T COG3963          42 SVIDPESGLPVLELGPGTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLY-----PGVNIINGDAFDLRTTLGEHKGQ  116 (194)
T ss_pred             HCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHC-----CCCCCCCCCHHHHHHHHHHCCCC
T ss_conf             4348445976477769866768999965799543689982779999999758-----87513054056578778652797


Q ss_pred             CCCEEEECCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             47668961674211001101103332886677889999999999999860898289997747
Q gi|254780666|r  306 LFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCS  367 (445)
Q Consensus       306 ~fD~iLlDaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCS  367 (445)
T Consensus       117 ~~D~viS~lPll~~------P-------~-------~~~iaile~~~~rl~~gg~lvqftYg  158 (194)
T COG3963         117 FFDSVISGLPLLNF------P-------M-------HRRIAILESLLYRLPAGGPLVQFTYG  158 (194)
T ss_pred             EEEEEEECCCCCCC------C-------H-------HHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf             40168865600248------6-------7-------78999999999856899727999846