HHsearch alignment for GI: 254780666 and conserved domain: COG4076
>COG4076 Predicted RNA methylase [General function prediction only].
Probab=96.75 E-value=0.00099 Score=47.42 Aligned_cols=100 Identities=18% Similarity=0.121 Sum_probs=78.6
Q ss_pred CCCEECCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCH
Q ss_conf 33100355644700001025684100010596798776544320488741772077445774344766896167421100
Q gi|254780666|r 242 NLSVLDLCAAPGGKTAQLIVSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCPKKLFDAVLVDAPCSSTGT 321 (445)
Q Consensus 242 g~~VLD~CAAPGGKT~~l~~~~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~~~~fD~iLlDaPCSg~Gt 321 (445)
T Consensus 33 ~d~~~DLGaGsGiLs~~Aa~~A~rViAiE~dPk~a~~a~eN~~v~g~~n~evv~gDA~~y~f-e~ADvvicEm------- 104 (252)
T COG4076 33 EDTFADLGAGSGILSVVAAHAAERVIAIEKDPKRARLAEENLHVPGDVNWEVVVGDARDYDF-ENADVVICEM------- 104 (252)
T ss_pred HHCEEECCCCCCHHHHHHHHHHCEEEEEECCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCC-CCCCEEHHHH-------
T ss_conf 41056346886328898875320278874180787776505777887646898055321332-3453408777-------
Q ss_pred HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 11011033328866778899999999999998608982899
Q gi|254780666|r 322 IRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVV 362 (445)
Q Consensus 322 ~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lv 362 (445)
T Consensus 105 -------------lDTaLi~E~qVpV~n~vleFLr~d~tii 132 (252)
T COG4076 105 -------------LDTALIEEKQVPVINAVLEFLRYDPTII 132 (252)
T ss_pred -------------HHHHHHCCCCCHHHHHHHHHHHCCCCCC
T ss_conf -------------6677633421289999999863388252