HHsearch alignment for GI: 254780666 and conserved domain: KOG1271
>KOG1271 consensus.
Probab=97.36 E-value=0.00023 Score=52.13 Aligned_cols=120 Identities=27% Similarity=0.298 Sum_probs=89.9
Q ss_pred CEECCCCCCCCCEEEECCC--CCCHHHHHCCHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCC-CCCCCEEEECCCCCCC
Q ss_conf 1003556447000010256--8410001059679877654432048874-1772077445774-3447668961674211
Q gi|254780666|r 244 SVLDLCAAPGGKTAQLIVS--GAKVTALDVSKRRLEKLRCNLDRLHLYA-EDIIEMDAFDYCP-KKLFDAVLVDAPCSST 319 (445)
Q Consensus 244 ~VLD~CAAPGGKT~~l~~~--~~~i~A~D~~~~Rl~~l~~~~~R~g~~~-~~~~~~D~~~~~~-~~~fD~iLlDaPCSg~ 319 (445)
T Consensus 70 ~VlDLGtGNG~~L~~L~~egf~~~L~GvDYs~~AV~LA~niAe~~~~~n~I~f~q~DI~~~~~~~~qfdlvlD------K 143 (227)
T KOG1271 70 RVLDLGTGNGHLLFQLAKEGFQSKLTGVDYSEKAVELAQNIAERDGFSNEIRFQQLDITDPDFLSGQFDLVLD------K 143 (227)
T ss_pred CEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEE------C
T ss_conf 1166157961889998871388886453157889999987887527885316887322577555543238960------5
Q ss_pred CHH---HCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHHHH
Q ss_conf 001---1011033328866778899999999999998608982899977478834399989999
Q gi|254780666|r 320 GTI---RRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKV 380 (445)
Q Consensus 320 Gt~---rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~~f 380 (445)
T Consensus 144 GT~DAisLs~d~~~~-------r~----~~Y~d~v~~ll~~~gifvItSCN~T~dELv~~f~~~ 196 (227)
T KOG1271 144 GTLDAISLSPDGPVG-------RL----VVYLDSVEKLLSPGGIFVITSCNFTKDELVEEFENF 196 (227)
T ss_pred CCEEEEECCCCCCCC-------CE----EEEHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCC
T ss_conf 741225507777665-------43----443556863038896799985576589999997259