HHsearch alignment for GI: 254780666 and conserved domain: PRK00050

Probab=96.65  E-value=0.00089  Score=47.74  Aligned_cols=85  Identities=19%  Similarity=0.215  Sum_probs=57.5

Q ss_pred             CCCCCCCCCCCEECCCCCCCCCEEEECC---CCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC----CCCC
Q ss_conf             2235632133100355644700001025---68410001059679877654432048874177207744577----4344
Q gi|254780666|r  234 VQLFGTLNNLSVLDLCAAPGGKTAQLIV---SGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYC----PKKL  306 (445)
Q Consensus       234 ~~~l~~~~g~~VLD~CAAPGGKT~~l~~---~~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~----~~~~  306 (445)
T Consensus        16 l~~L~~~~~g~yvD~T~G~GGHS~~iL~~l~~~~~li~iDrD~~ai~~a~~~l~~~~-~r~~~~~~nF~~l~~~l~~~~~   94 (309)
T PRK00050         16 VDGLAIKPDGIYVDGTFGRGGHSRAILSQLGPGGRLIAIDRDPQAIAAAKERLDPFG-GRFTIVHGNFSDLAEYLAEVGK   94 (309)
T ss_pred             HHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHCCC
T ss_conf             983682899999993889839999999727999889999898899999999865258-8289992779889999986388


Q ss_pred             CCEEEECCCCCCC
Q ss_conf             7668961674211
Q gi|254780666|r  307 FDAVLVDAPCSST  319 (445)
Q Consensus       307 fD~iLlDaPCSg~  319 (445)
T Consensus        95 vdgil~DLGvSS~  107 (309)
T PRK00050         95 VDGILLDLGVSSP  107 (309)
T ss_pred             CCEEEEEEECCCH
T ss_conf             7789997224833