HHsearch alignment for GI: 254780666 and conserved domain: PRK04457
>PRK04457 spermidine synthase; Provisional.
Probab=96.18 E-value=0.019 Score=37.83 Aligned_cols=141 Identities=18% Similarity=0.230 Sum_probs=91.7
Q ss_pred CCCCCCCCCCCCCCEECCCCCCCCCEEEE--CCCCCCHHHHHCCHHHHHHHHHHHHCCCC--CCEEEEECCCCCCC--CC
Q ss_conf 23222356321331003556447000010--25684100010596798776544320488--74177207744577--43
Q gi|254780666|r 231 SIPVQLFGTLNNLSVLDLCAAPGGKTAQL--IVSGAKVTALDVSKRRLEKLRCNLDRLHL--YAEDIIEMDAFDYC--PK 304 (445)
Q Consensus 231 ql~~~~l~~~~g~~VLD~CAAPGGKT~~l--~~~~~~i~A~D~~~~Rl~~l~~~~~R~g~--~~~~~~~~D~~~~~--~~ 304 (445)
T Consensus 57 Mm~~LLf~p~P-k~vl~iGLGgGsl~k~~~~~~P~~~i~~VEIdp~Vi~vAr~~F~-lP~dd~Rl~V~~~Dg~~fv~~~~ 134 (262)
T PRK04457 57 MMGFLLFNPRP-QHILQIGLGGGSFAKFIDTYLPDTRQTAVEINPQVIAVARNHFE-LPFEDEKFEIIEADGAEYIKVFP 134 (262)
T ss_pred HHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCC-CCCCCCCEEEEECCHHHHHHHCC
T ss_conf 99998658997-86999925701999999983986758999878899999998657-99999726999553899985486
Q ss_pred CCCCEEEECCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHHHHHHHC
Q ss_conf 44766896167421100110110333288667788999999999999986089828999774788343999899999968
Q gi|254780666|r 305 KLFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLRSS 384 (445)
Q Consensus 305 ~~fD~iLlDaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~~fL~~~ 384 (445)
T Consensus 135 ~~~DvI~vD~f-d~~g~----~~--------~-----L~t~~Fy~~c~~~L~~~Gvlv~Nl~~~~~~-~~~~l~~i~~~F 195 (262)
T PRK04457 135 ASTDVILVDGF-DGEQI----VD--------A-----LVTQPFFRDCRNALSSDGVFVTNLWSGDKR-YQRYIERLLSVF 195 (262)
T ss_pred CCCCEEEEECC-CCCCC----CC--------C-----CCCHHHHHHHHHHCCCCCEEEEECCCCCCC-HHHHHHHHHHHH
T ss_conf 77788999688-98888----60--------0-----082999999998649893999986889986-599999999972
Q ss_pred CCCEEECC
Q ss_conf 87417813
Q gi|254780666|r 385 PIPVELVP 392 (445)
Q Consensus 385 ~~~~~~~~ 392 (445)
T Consensus 196 ~~~~~~~~ 203 (262)
T PRK04457 196 EGRVLELP 203 (262)
T ss_pred CCEEEEEE
T ss_conf 87399972