HHsearch alignment for GI: 254780666 and conserved domain: PRK10901
>PRK10901 16S rRNA methyltransferase B; Provisional.
Probab=100.00 E-value=0 Score=837.26 Aligned_cols=410 Identities=30% Similarity=0.482 Sum_probs=366.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 77846999999999999955998899999985112321689889999999999999608999999999842881004889
Q gi|254780666|r 2 KSGMNARLVSSHLLSCVMRKRISLTCLLDLEYGDSAFRLLSQRDQILVRAIVNVTLRFLPRIDAVLDFVLISSLPRKKYS 81 (445)
Q Consensus 2 ~~~~~aR~~A~~iL~~v~~~~~~~~~~l~~~~~~~~~~~L~~~Dr~~~~~Lv~gvlR~~~~ld~il~~~~~~~~~~~~~~ 81 (445)
T Consensus 1 ~~~~n~R~~A~~~L~~v~~~g~~~~~~L~~~~-----~~l~~~Dr~l~~elvyG~lR~~~~LD~il~~~~~~p~~~~~~~ 75 (428)
T PRK10901 1 KKQYNLRSIAAQAVEQVVEQGQSLSNVLPPLQ-----QKVSDKDKALLQELCFGVLRTLSQLEWLINKLMARPMTGKQRT 75 (428)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 99764999999999999986992999999987-----0599988999999999999768999999999837998543479
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC---HHHHHHHCCCHHHHHHHHH
Q ss_conf 9999999999999868997332562258775225875544444310221100111100---0001231299789999884
Q gi|254780666|r 82 LQQLLRVSVAQILYLDVADYAVVDLAVEQAKRDKENRHFAKLVNSILRRVSREKIELL---QRIAGISIIPEWFKERLEN 158 (445)
Q Consensus 82 ~~~iLr~a~~ell~~~~p~~a~vneaVelak~~~~~~~~~~~vNAVLR~~~r~~~~~~---~~l~~~~s~P~Wl~~~~~~ 158 (445)
T Consensus 76 v~~lLrlg~yQll~~~iP~~AaVne~Ve~ak~~~~-~~~~glVNAVLR~~~r~~~~~~~~~~~~~~~~s~P~Wlv~~~~~ 154 (428)
T PRK10901 76 VHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKR-PQLKGLINGVLRQFQRQQEELLAEFNTSDARYLHPSWLLKRLQK 154 (428)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHCCHHHHHHHHH
T ss_conf 99999999999961799951479899999986166-30467889999998604321103324621243098789999999
Q ss_pred CCCHHHHHHHHHHHCCCCCEEEEEC---CCHHHHHHHHHHHHCC-------CCCCEECCCCCCHHHCHHHHHCCCEECCC
Q ss_conf 1267999999996146983667615---9989999864321023-------56611104567855585011001013463
Q gi|254780666|r 159 FYGKERVLAISDACISPLYIDLTVK---FDIETWAHKLNAVMLP-------TGGIRLKELPESIVSLPGFAEGVWWVQDA 228 (445)
Q Consensus 159 ~~G~~~~~~l~~~~~~p~~l~i~~k---~~~~~~~~~L~~~~~~-------~~~~~~~~~~~~i~~~~~f~eG~~~VQD~ 228 (445)
T Consensus 155 ~~~~-~~~~ll~a~n~~pp~~lRvN~~k~~~~~~~~~L~~~gi~~~~~~~~~~~l~l~~-~~~i~~l~~f~~G~~~VQD~ 232 (428)
T PRK10901 155 AYPE-QWQSIVEANNQRPPMWLRVNRTHHSRDEWLALLEEAGMKGFPHPDYPDAVRLET-PAPVHALPGFEEGWVTVQDA 232 (428)
T ss_pred HHHH-HHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECC-CCCHHHCCCCCCCEEEEECH
T ss_conf 7589-999999960899983788357769999999999858997352688997699879-99811081001681898172
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCCCCCEEEE--CCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC---CC
Q ss_conf 2123222356321331003556447000010--256841000105967987765443204887417720774457---74
Q gi|254780666|r 229 SASIPVQLFGTLNNLSVLDLCAAPGGKTAQL--IVSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDY---CP 303 (445)
Q Consensus 229 aSql~~~~l~~~~g~~VLD~CAAPGGKT~~l--~~~~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~---~~ 303 (445)
T Consensus 233 aSql~~~ll~p~~g~~VLD~CAaPGGKt~~la~~~~~~~v~A~D~~~~Rl~~l~~n~~Rlg~~-~~v~~~d~~~~~~~~~ 311 (428)
T PRK10901 233 SAQGCVTLLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCG 311 (428)
T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEEECCCCCHHHHCC
T ss_conf 767899864988898798716887668999999645892899969888999999999975997-3999776557233134
Q ss_pred CCCCCEEEECCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHHHHHHH
Q ss_conf 34476689616742110011011033328866778899999999999998608982899977478834399989999996
Q gi|254780666|r 304 KKLFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLRS 383 (445)
Q Consensus 304 ~~~fD~iLlDaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~~fL~~ 383 (445)
T Consensus 312 ~~~fD~ILlDaPCSg~G~lrR~Pdikw~~~~~di~~l~~lQ~~iL~~a~~~lk~gG~LvYsTCSi~~eENe~~I~~FL~~ 391 (428)
T PRK10901 312 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSQQIKAFLQR 391 (428)
T ss_pred CCCCCEEEECCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 45678799758988872444685421128999999999999999999998668898899998999957789999999985
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEC
Q ss_conf 8874178137632335566434558688089887632355777888631466765412
Q gi|254780666|r 384 SPIPVELVPLNSAYWKSIDMAMALSPEGWIRITPDMLEKIDGVSSGMDGFFAVALRRL 441 (445)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r~~P~~~~~~~~~~~g~DGFF~A~l~k~ 441 (445)
T Consensus 392 ~~-d~~l~~~~~~------------~~~~~~~~P~--------~~~~DGFf~a~L~kk 428 (428)
T PRK10901 392 TP-DAELCETGTP------------EQPGKQNLPG--------AEEGDGFFYAKLIKK 428 (428)
T ss_pred CC-CCEECCCCCC------------CCCCEEECCC--------CCCCCCEEEEEEEEC
T ss_conf 99-9786067788------------9998788999--------999873799999849