HHsearch alignment for GI: 254780666 and conserved domain: PRK11088

>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional.
Probab=95.43  E-value=0.021  Score=37.54  Aligned_cols=70  Identities=19%  Similarity=0.179  Sum_probs=49.0

Q ss_pred             CCCCEECCCCCCCCCEEEECC-----CCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCCCCEEE-EC
Q ss_conf             133100355644700001025-----684100010596798776544320488741772077445774-34476689-61
Q gi|254780666|r  241 NNLSVLDLCAAPGGKTAQLIV-----SGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCP-KKLFDAVL-VD  313 (445)
Q Consensus       241 ~g~~VLD~CAAPGGKT~~l~~-----~~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~-~~~fD~iL-lD  313 (445)
T Consensus        85 ~~~~ilD~GCGEGyYl~~l~~~l~~~~~~~~~G~DiSK~ai~~Aak----~~-~~~~~~Va~~~~lP~~d~s~D~vl~vF  159 (272)
T PRK11088         85 KATAILDIGCGEGYYTHALADALPEVTTCQLFGLDISKVAIKYAAK----RY-PQVTFCVASSHRLPFADQSLDAIIRIY  159 (272)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHC----CC-CCCEEEEEECCCCCCCCCCCEEEEEEE
T ss_conf             7864888158777899999997411578737998117999999962----68-885499961001888766540899984


Q ss_pred             CC
Q ss_conf             67
Q gi|254780666|r  314 AP  315 (445)
Q Consensus       314 aP  315 (445)
T Consensus       160 sP  161 (272)
T PRK11088        160 AP  161 (272)
T ss_pred             CC
T ss_conf             37