HHsearch alignment for GI: 254780666 and conserved domain: TIGR00536
>TIGR00536 hemK_fam methyltransferase, HemK family; InterPro: IPR004556 The gene hemK from Escherichia coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase . Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity . Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both Escherichia coli and Haemophilus influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=95.83 E-value=0.024 Score=37.07 Aligned_cols=139 Identities=19% Similarity=0.281 Sum_probs=102.7
Q ss_pred CCC-CCEECCCCCCCCCEEEEC--CC--CCCHHHHHCCHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCC---CCCEE
Q ss_conf 213-310035564470000102--56--8410001059679877654432048874-177207744577434---47668
Q gi|254780666|r 240 LNN-LSVLDLCAAPGGKTAQLI--VS--GAKVTALDVSKRRLEKLRCNLDRLHLYA-EDIIEMDAFDYCPKK---LFDAV 310 (445)
Q Consensus 240 ~~g-~~VLD~CAAPGGKT~~l~--~~--~~~i~A~D~~~~Rl~~l~~~~~R~g~~~-~~~~~~D~~~~~~~~---~fD~i 310 (445)
T Consensus 124 ~~~p~~~~d~~~g~g~~~~~~~~~~~pc~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 203 (311)
T TIGR00536 124 PPLPLHILDLGTGSGCIALALAYEFPPCNAEVIAVDLSPDALALAEENAEKLGLEGRVELLQSDLLEPLPGLGGPKLDLL 203 (311)
T ss_pred CCCCCHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCEEEE
T ss_conf 77650111014563156665543046666226641122367888887677643201200101124443320366522366
Q ss_pred EECCCCCCCCHHHCC-CHHHHCCCHHHH----HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHH
Q ss_conf 961674211001101-103332886677----88999999999999986089828999774788343999899
Q gi|254780666|r 311 LVDAPCSSTGTIRRH-PDVLWTRDTDDI----VKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQ 378 (445)
Q Consensus 311 LlDaPCSg~Gt~rr~-Pd~~w~~~~~~l----~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~ 378 (445)
T Consensus 204 ~~~ppy~~~~~~~~~~~~~~~~~p~~~l~~~g~~g~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 276 (311)
T TIGR00536 204 VSNPPYIDEEDLADLSPGVVLFEPLLALVGFGDDGLKILKRILELAPDYLKPGGFLLLEIGNWQLGLLKELLR 276 (311)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH
T ss_conf 4588654413455531123432003454304740078999998754543056755899616223567787664