HHsearch alignment for GI: 254780666 and conserved domain: pfam01209
>pfam01209 Ubie_methyltran ubiE/COQ5 methyltransferase family.
Probab=98.82 E-value=3.3e-09 Score=88.03 Aligned_cols=125 Identities=25% Similarity=0.371 Sum_probs=93.6
Q ss_pred CCCCCCCCCCCCEECCCCCCCCCEEEEC---CCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCCCC
Q ss_conf 2223563213310035564470000102---5684100010596798776544320488741772077445774-34476
Q gi|254780666|r 233 PVQLFGTLNNLSVLDLCAAPGGKTAQLI---VSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCP-KKLFD 308 (445)
Q Consensus 233 ~~~~l~~~~g~~VLD~CAAPGGKT~~l~---~~~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~-~~~fD 308 (445)
T Consensus 39 ~v~~~~~~~g~~vLDl~cGTG~~~~~l~~~~~~~~~v~gvD~S~~ML~~a~~k~~~~~~~~i~~~~~da~~lpf~d~sfD 118 (233)
T pfam01209 39 TMKCMGVKRGNKFLDVAGGTGDWTFGLSDSAGSSGKVVGLDINENMLKEGEKKAKEEGKYNIEFLQGNAEELPFEDDSFD 118 (233)
T ss_pred HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 99861899999899825405889999999849997499996999999999999985699983699821666886665657
Q ss_pred EEEECCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHHHHHH
Q ss_conf 68961674211001101103332886677889999999999999860898289997747883439998999999
Q gi|254780666|r 309 AVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLR 382 (445)
Q Consensus 309 ~iLlDaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~~fL~ 382 (445)
T Consensus 119 ~v~~-----~fg-lrn~~d---------------~-~~al~E~~RVLKPGG~l~i--lefs~P~~~-~~~~~~~ 167 (233)
T pfam01209 119 IVTI-----SFG-LRNFPD---------------Y-LKVLKEAFRVLKPGGRVVC--LEFSKPENP-LLSQAYE 167 (233)
T ss_pred HHHH-----HHH-HHCCCC---------------H-HHHHHHHHHHCCCCCEEEE--EECCCCCCH-HHHHHHH
T ss_conf 3142-----101-212588---------------8-9999999987278978999--978888777-9999999