HHsearch alignment for GI: 254780666 and conserved domain: pfam06325
>pfam06325 PrmA Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.
Probab=97.66 E-value=0.00012 Score=54.09 Aligned_cols=125 Identities=18% Similarity=0.189 Sum_probs=85.3
Q ss_pred CCCCCCCCCC--CCCCCCEECCCCCCCCCEEEECCCC-CCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
Q ss_conf 2123222356--3213310035564470000102568-410001059679877654432048874177207744577434
Q gi|254780666|r 229 SASIPVQLFG--TLNNLSVLDLCAAPGGKTAQLIVSG-AKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCPKK 305 (445)
Q Consensus 229 aSql~~~~l~--~~~g~~VLD~CAAPGGKT~~l~~~~-~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~~~ 305 (445)
T Consensus 146 TT~lcl~~l~~~~~~~~~vlD~GcGSGILaIaA~klGa~~v~a~DiDp~Av~~a~eN~~~N~v~~~~-~~~~~~~-~~~~ 223 (294)
T pfam06325 146 TTALCLEALESLVKPGETVLDVGCGSGILAIAALKLGAKKVVGVDIDPVAVRAAKENAELNGVEAQL-EVYLPGD-LPEG 223 (294)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCE-EEECCCC-CCCC
T ss_conf 7999999998650369867850565089999999759996899988899999999999976998317-9964431-5566
Q ss_pred CCCEEEECCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHHHHHHH
Q ss_conf 476689616742110011011033328866778899999999999998608982899977478834399989999996
Q gi|254780666|r 306 LFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLRS 383 (445)
Q Consensus 306 ~fD~iLlDaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~~fL~~ 383 (445)
T Consensus 224 ~~DlIvA-------------------------NIla~~L~~l~~~~~~~l~~~G~lilS--Gil~~q~~~v~-~a~~~ 273 (294)
T pfam06325 224 KADVVVA-------------------------NILADPLIELAPDIYALVKPGGYLILS--GILEEQADDVA-EAYSQ 273 (294)
T ss_pred CCCEEEE-------------------------HHCHHHHHHHHHHHHHHHCCCCEEEEC--CCCHHHHHHHH-HHHHC
T ss_conf 4578984-------------------------108999999999999973899899991--78289999999-99986