HHsearch alignment for GI: 254780666 and conserved domain: pfam10237
>pfam10237 N6-adenineMlase Probable N6-adenine methyltransferase. This is a protein of approximately 200 residues which is conserved from plants to humans. It contains a highly conserved QFW motif close to the N-terminus and a DPPF motif in the centre. The DPPF motif is characteristic of N-6 adenine-specific DNA methylases, and this family is found in eukaryotes.
Probab=91.87 E-value=0.44 Score=27.76 Aligned_cols=55 Identities=24% Similarity=0.338 Sum_probs=39.4
Q ss_pred CCCCCEEEECCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHHHHHHH
Q ss_conf 34476689616742110011011033328866778899999999999998608982899977478834399989999996
Q gi|254780666|r 304 KKLFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLRS 383 (445)
Q Consensus 304 ~~~fD~iLlDaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~~fL~~ 383 (445)
T Consensus 83 ~~~fD~vi~DPP---------------FLseec~~K~a~t-------~~~L~k~~~kli~~T----g~~~~~~~~kll~~ 136 (161)
T pfam10237 83 KGKFDRVIADPP---------------FLSEECLTKTAIT-------IKLLLKPDSKLLLCT----GERMEDLAAKLLGL 136 (161)
T ss_pred HCCCCEEEECCC---------------CCCHHHHHHHHHH-------HHHHHCCCCEEEEEC----HHHHHHHHHHHCCC
T ss_conf 086788998999---------------9899999999999-------999808998799934----89999999997298
Q ss_pred C
Q ss_conf 8
Q gi|254780666|r 384 S 384 (445)
Q Consensus 384 ~ 384 (445)
T Consensus 137 ~ 137 (161)
T pfam10237 137 K 137 (161)
T ss_pred E
T ss_conf 2