HHsearch alignment for GI: 254780666 and conserved domain: smart00650

Probab=96.24  E-value=0.0042  Score=42.78  Aligned_cols=85  Identities=22%  Similarity=0.244  Sum_probs=68.2

Q ss_pred             CCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC-CCCEEE
Q ss_conf             2223563213310035564470000102568410001059679877654432048874177207744577434-476689
Q gi|254780666|r  233 PVQLFGTLNNLSVLDLCAAPGGKTAQLIVSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCPKK-LFDAVL  311 (445)
Q Consensus       233 ~~~~l~~~~g~~VLD~CAAPGGKT~~l~~~~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~~~-~fD~iL  311 (445)
T Consensus         5 Iv~~a~~~~~d~VlEIGPG~G~LT~~Ll~~~~~v~aiE~D~~l~~~L~~~~~--~~~n~~ii~~D~L~~~~~~~~~~~iv   82 (169)
T smart00650        5 IVRAANLRPGDTVLEIGPGKGALTEELLERAARVTAIEIDPRLAPRLREKFA--AADNLTVIHGDALKFDLPKLQPYKVV   82 (169)
T ss_pred             HHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHC--CCCCEEEEECCHHCCCCCCCCCCEEE
T ss_conf             9886389994979996897029999999731635316378899999998641--07977999571112553115873699


Q ss_pred             ECCCCCCC
Q ss_conf             61674211
Q gi|254780666|r  312 VDAPCSST  319 (445)
Q Consensus       312 lDaPCSg~  319 (445)
T Consensus        83 ~NLPY~Is   90 (169)
T smart00650       83 GNLPYNIS   90 (169)
T ss_pred             ECCCCCCH
T ss_conf             34763011