BLAST/PSIBLAST alignment of GI: 254780666 and GI: 222087916 at iteration 1
>gi|222087916|ref|YP_002546454.1| tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein [Agrobacterium radiobacter K84] Length = 469
>gi|221725364|gb|ACM28520.1| tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein [Agrobacterium radiobacter K84] Length = 469
 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/439 (52%), Positives = 298/439 (67%), Gaps = 4/439 (0%)

Query: 2   KSGMNARLVSSHLLSCVMRKRISLTCLLDLEYGDSAFRLLSQRDQILVRAIVNVTLRFLP 61
           K G  AR  ++ +LS V+ ++  L  +LD E G+ A++ L   D+ LVRAI+N  LR LP
Sbjct: 33  KPGFAARAAAAKILSAVIDRKTPLDGMLDAEGGNPAYKALGDSDRALVRAILNSALRHLP 92

Query: 62  RIDAVLDFVLISSLPRKKYSLQQLLRVSVAQILYLDVADYAVVDLAVEQAKRDKENRHFA 121
           RI+A +  +L S LP    +L  +L V  AQ+LYLDV D++ VD+AVEQA +D  NR FA
Sbjct: 93  RIEAAIASLLDSPLPEGARALHHVLVVGAAQMLYLDVPDHSAVDIAVEQANQDPRNRRFA 152

Query: 122 KLVNSILRRVSREKIELLQRIAGISIIPEWFKERLENFYGKERVLAISDACISPLYIDLT 181
           KLVN+ILRR+ REK ++L + A +  +P+WF  RLE  YG++  L ISD  + P  ID+T
Sbjct: 153 KLVNAILRRIGREKQDILSQGADVPAMPKWFLTRLEAAYGRQAALKISDTQLEPAAIDVT 212

Query: 182 VKFDIETWAHKLNAVMLPTGGIRLKELPESIVSLPGFAEGVWWVQDASASIPVQLFGTLN 241
           VK D E WA +LN V+LPTGG+RL     SI SL GFA+G WWVQDA+ASIP +LFG+L 
Sbjct: 213 VKSDAEGWAKRLNGVVLPTGGVRLAAFEGSIPSLDGFADGEWWVQDAAASIPAKLFGSLA 272

Query: 242 NLSVLDLCAAPGGKTAQLIVSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDY 301
              V+DLCAAPGGKTAQLI++G KVTALD S  RL++L  NL RL L AE ++  D   +
Sbjct: 273 GQRVVDLCAAPGGKTAQLILAGGKVTALDQSANRLKRLSGNLARLGLEAETVV-ADMAKF 331

Query: 302 CPKKLFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIV 361
            P  LFDA L+DAPCSSTGT RRHPDVLWT+  +DI K    Q +LL   ++ VKPGG+V
Sbjct: 332 QPDDLFDAALLDAPCSSTGTTRRHPDVLWTKGPEDIAKLTALQERLLRHALTLVKPGGLV 391

Query: 362 VFSNCSLDKQDSEEVVQKVLRSSPIPVELVPLNSAYWKSIDMAMALSPEGWIRITPDMLE 421
           VFSNCSLD ++ E++V +VL  + +  E V +    W  ++   A+SP G  R TPDML 
Sbjct: 392 VFSNCSLDPEEGEDLVARVLSETDM-AERVAIKPEDWPGLE--AAISPLGAFRTTPDMLP 448

Query: 422 KIDGVSSGMDGFFAVALRR 440
              G +SG+DGFFAV LRR
Sbjct: 449 LSGGFASGLDGFFAVVLRR 467