RPSBLAST alignment for GI: 254780666 and conserved domain: TIGR01951

>gnl|CDD|162621 TIGR01951, nusB, transcription antitermination factor NusB. A transcription antitermination complex active in many bacteria was designated N-utilization substance (Nus) in E. coli because of its interaction with phage lambda protein N. This model represents NusB. Other components are NusA and NusG. NusE is, in fact, ribosomal protein S10. Length = 129

 Score = 38.6 bits (91), Expect = 0.003
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 21/109 (19%)

Query: 37  AFRLLSQRDQILVRAIVNVTLRFLPRIDAVLDFVLISSLPRKKYSLQQL-------LRVS 89
             R L + D+     +V   L     ID ++   L      K +SL++L       LR++
Sbjct: 31  EERELDEEDREYFLELVRGVLENQEEIDELISPHL------KDWSLERLDPVDRAILRLA 84

Query: 90  VAQILYLDVADYAVV-DLAVEQAKR---DKENRHFAKLVNSILRRVSRE 134
             ++LY     Y VV + AVE AK+   +       K VN +L ++++E
Sbjct: 85  AYELLYRPDVPYKVVINEAVELAKKFGDEDS----HKFVNGVLDKIAKE 129