RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780668|ref|YP_003065081.1| hypothetical protein CLIBASIA_02775 [Candidatus Liberibacter asiaticus str. psy62] (46 letters) >gnl|CDD|180500 PRK06270, PRK06270, homoserine dehydrogenase; Provisional. Length = 341 Score = 25.6 bits (57), Expect = 2.9 Identities = 8/20 (40%), Positives = 11/20 (55%) Query: 16 KGKLNVAAVKCELKAEVTVT 35 G LN A + +L +VTV Sbjct: 295 SGTLNAATFETDLAGDVTVV 314 >gnl|CDD|178138 PLN02523, PLN02523, galacturonosyltransferase. Length = 559 Score = 24.8 bits (54), Expect = 5.0 Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 27 ELKAEVTVTRAAIVEAKEL 45 E+K V V R I E+KE Sbjct: 153 EVKERVKVARQMIAESKES 171 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.313 0.125 0.328 Gapped Lambda K H 0.267 0.0618 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 628,945 Number of extensions: 22615 Number of successful extensions: 33 Number of sequences better than 10.0: 1 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 7 Length of query: 46 Length of database: 5,994,473 Length adjustment: 19 Effective length of query: 27 Effective length of database: 5,583,921 Effective search space: 150765867 Effective search space used: 150765867 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 50 (23.3 bits)