RPS-BLAST 2.2.22 [Sep-27-2009]
Database: pdb70
24,244 sequences; 5,693,230 total letters
Searching..................................................done
Query= gi|254780668|ref|YP_003065081.1| hypothetical protein
CLIBASIA_02775 [Candidatus Liberibacter asiaticus str. psy62]
(46 letters)
***** No hits found ******
Database: pdb70
Posted date: Jan 26, 2011 11:21 AM
Number of letters in database: 5,693,230
Number of sequences in database: 24,244
Lambda K H
0.313 0.125 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24244
Number of Hits to DB: 318,450
Number of extensions: 7892
Number of successful extensions: 10
Number of sequences better than 10.0: 0
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 0
Length of query: 46
Length of database: 5,693,230
Length adjustment: 19
Effective length of query: 27
Effective length of database: 5,232,594
Effective search space: 141280038
Effective search space used: 141280038
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (23.9 bits)