RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780668|ref|YP_003065081.1| hypothetical protein
CLIBASIA_02775 [Candidatus Liberibacter asiaticus str. psy62]
         (46 letters)



>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 361

 Score = 22.9 bits (49), Expect = 7.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 7   GADLTEKFSKGKLNVAAVKCELKAEVTVT 35
           GA   E  S GK+ V A   ++ A+ ++ 
Sbjct: 310 GARPDEAVSWGKIRVDAQPVKVYADASLV 338


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.313    0.125    0.328 

Gapped
Lambda     K      H
   0.267   0.0626    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 139,422
Number of extensions: 3563
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 3
Length of query: 46
Length of database: 2,407,596
Length adjustment: 18
Effective length of query: 28
Effective length of database: 2,160,456
Effective search space: 60492768
Effective search space used: 60492768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.1 bits)