HHsearch alignment for GI: 254780669 and conserved domain: PRK10415
>PRK10415 tRNA-dihydrouridine synthase B; Provisional.
Probab=94.58 E-value=0.46 Score=27.90 Aligned_cols=112 Identities=15% Similarity=0.189 Sum_probs=68.9
Q ss_pred ECHHHCCCHHHHHHHHH-----CCCEEEEECCC--CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHH
Q ss_conf 22576289999999850-----59779983677--789999999999997258780899514654440100000001068
Q gi|254780669|r 140 IPALLCRQTDLLTAAAQ-----TGRVINVKKGQ--FLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPI 212 (301)
Q Consensus 140 IgA~~~rqtdLl~a~a~-----t~kpV~iKkgq--~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~ 212 (301)
T Consensus 110 ~GsaLl~~p~~~~~iv~a~~~a~~iPVTvKiRlG~~~~~~~~~~~~~~~e~aG~~~itvHgRT~~q~y~g-~adw~~i~~ 188 (321)
T PRK10415 110 AGSALLQYPDLVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNG-EAEYDSIRA 188 (321)
T ss_pred CEEEHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCC-CCCHHHHHH
T ss_conf 3650633989999999999734487469998468885224399999999856988999972213443169-987799999
Q ss_pred HHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE--ECCCH
Q ss_conf 885-187168711777421223453212638899999999997189889998--36983
Q gi|254780669|r 213 MTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE--THQDP 268 (301)
Q Consensus 213 lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE--~Hp~P 268 (301)
T Consensus 189 vk~~~~iPvi~N-----------G----DI~~~~-da~~~l~~tg~dgvMigRgal~nP 231 (321)
T PRK10415 189 VKQKVSIPVIAN-----------G----DITDPL-KARAVLDYTGADALMIGRAAQGRP 231 (321)
T ss_pred HHHCCCCCEEEC-----------C----CCCCHH-HHHHHHHHHCCCEEEECHHHHCCC
T ss_conf 985479978965-----------8----919999-999999862999999756653698