HHsearch alignment for GI: 254780669 and conserved domain: PRK11840

Probab=90.98  E-value=0.39  Score=28.38  Aligned_cols=99  Identities=23%  Similarity=0.330  Sum_probs=62.5

Q ss_pred             HHHHHHHHCCC----EEEEECCCCCCHHHHHHHHHHHHHCC-------CCCEEEEEC----C--------CCCCCHHHCC
Q ss_conf             99999850597----79983677789999999999997258-------780899514----6--------5444010000
Q gi|254780669|r  149 DLLTAAAQTGR----VINVKKGQFLSPWEMHNILQKLHAHG-------AKDVLFCER----G--------TSFGYNTLVT  205 (301)
Q Consensus       149 dLl~a~a~t~k----pV~iKkgq~~s~~e~~~a~eki~~~G-------n~~i~lcER----G--------~~fgy~~lvv  205 (301)
T Consensus       158 ~lARe~~~t~~iKLEVi~D~~tL~Pd~~etl~Aae~Lv~eGF~VlpY~~dDpv~akrLed~Gc~avMPlgsPIGSg~Gi~  237 (327)
T PRK11840        158 RLAREAGGWDLVKLEVLGDQKTLYPDMVETLKAAEVLVKEGFQVMVYCSDDPIAAKRLEDAGAVAVMPLGAPIGSGLGIQ  237 (327)
T ss_pred             HHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCC
T ss_conf             99998559985899980797667998589999999999789889887169868999998759838862245234788868


Q ss_pred             CCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             0001068885-1871687117774212234532126388999999999971898899983
Q gi|254780669|r  206 DMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET  264 (301)
Q Consensus       206 D~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~  264 (301)
T Consensus       238 n~~~i~~i~e~~~vpvivDAGi-------------G~----pS~A~~aMElG~daVL~NT  280 (327)
T PRK11840        238 NPYTIRLIVEGAKVPVLVDAGV-------------GT----ASDAAVAMELGCDGVLMNT  280 (327)
T ss_pred             CHHHHHHHHHHCCCCEEEECCC-------------CC----HHHHHHHHHCCCCEEEHHH
T ss_conf             9999999997369978995798-------------98----7899999863666666336