HHsearch alignment for GI: 254780669 and conserved domain: TIGR01361
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase; InterPro: IPR006268 These sequences are one of at least three types of phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthase). This enzyme catalyzes the first of 7 steps in the biosynthesis of chorismate, that last common precursor of all three aromatic amino acids and of PABA, ubiquinone and menaquinone. Some members of this family, including an experimentally characterised member from Bacillus subtilis, are bifunctional, with a chorismate mutase domain N-terminal to this region. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.; GO: 0016832 aldehyde-lyase activity, 0009073 aromatic amino acid family biosynthetic process.
Probab=100.00 E-value=0 Score=695.02 Aligned_cols=255 Identities=29% Similarity=0.516 Sum_probs=237.1
Q ss_pred HHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 44543046876178317706835787727976997069995486349999999999999996553399706601557688
Q gi|254780669|r 9 LEEKQRRIDKNHMIHTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKAN 88 (301)
Q Consensus 9 l~~~~~~i~~~~~~~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKan 88 (301)
T Consensus 2 l~S~~~~~~-------~tv~~v----~~v~IG~G~-~~~iAGPCsvEs~eq~~~~A~~vk~~Ga~~LRGGAfKP------ 63 (262)
T TIGR01361 2 LVSREFKPE-------KTVVDV----KGVKIGEGS-PIVIAGPCSVESEEQIVETARFVKEAGAKILRGGAFKP------ 63 (262)
T ss_pred CCCCCCCCC-------CCEEEC----CCEEECCCE-EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCC------
T ss_conf 887532677-------615771----857753847-89986487748879999999999866740430663488------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCC
Q ss_conf 66632224567124888999886652876885228899998765021578822576289999999850597799836777
Q gi|254780669|r 89 RSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQF 168 (301)
Q Consensus 89 RtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~ 168 (301)
T Consensus 64 RTSPYsFQGlg-~~gl~~l~~A~~~~GL~~vTEvmd~~d~e~~~~y~D~lQiGARNmQNF~LL~~vG~~~KPVLLKRG~~ 142 (262)
T TIGR01361 64 RTSPYSFQGLG-EEGLKLLRRAADETGLPVVTEVMDPRDVEIVAEYADILQIGARNMQNFELLKEVGKQGKPVLLKRGMG 142 (262)
T ss_pred CCCCCCCCCCH-HHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCC
T ss_conf 88884124741-89999999999860994898863625677787651134222541225699999722379755307721
Q ss_pred CCHHHHHHHHHHHHHCC-CCCEEEEECCC-CCCCHHHCC-CCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 89999999999997258-78089951465-444010000-0001068885-18716871177742122345321263889
Q gi|254780669|r 169 LSPWEMHNILQKLHAHG-AKDVLFCERGT-SFGYNTLVT-DMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQY 244 (301)
Q Consensus 169 ~s~~e~~~a~eki~~~G-n~~i~lcERG~-~fgy~~lvv-D~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~ 244 (301)
T Consensus 143 aTi~EwL~AAEYIl~~GsN~~ViLCERGIRTfE~~TR~TLD~saV~~~K~~tHLPi~VDPSH~~-----------GrRdL 211 (262)
T TIGR01361 143 ATIEEWLEAAEYILSEGSNGNVILCERGIRTFEKSTRNTLDLSAVPLLKKETHLPIIVDPSHAA-----------GRRDL 211 (262)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCC-----------CHHHH
T ss_conf 5899999999999846889954899758567630024533378999998605898787187987-----------62457
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCH-HHHHHHHHHHHH
Q ss_conf 9999999997189889998369833479782018688-999999999999
Q gi|254780669|r 245 IVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINI-KDLPKLLSQLLA 293 (301)
Q Consensus 245 v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l-~~l~~ll~~l~~ 293 (301)
T Consensus 212 V~plA~AA~A~GADgl~iEVHp~Pe~ALSD~~Qql~~c~~f~~~~~~~~~ 261 (262)
T TIGR01361 212 VLPLAKAAIAAGADGLMIEVHPDPEKALSDSKQQLTPCEEFKRLVKELRA 261 (262)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 88999998975747368986678333207871144667889999998504