HHsearch results for GI: 254780669 and protein with PDBid: 1vc4_A

>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, X-RAY diffraction, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=91.89  E-value=0.59  Score=25.76  Aligned_cols=113  Identities=14%  Similarity=0.032  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--ECCCHHHHHHHHH-HCC
Q ss_conf             9999999999655339970660155768866632224567124888999886652876885--2288999987650-215
Q gi|254780669|r   60 AFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DVHTEQQCEAIAD-SVD  136 (301)
Q Consensus        60 ~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV~~~~~~e~~~~-~vD  136 (301)
                      ..++|+...+.|+..    + --      =|-+..|.|.     ++.|+.+++.+.+||+-  =|-++.|+..... .+|
T Consensus        67 p~~~a~~y~~~GA~a----i-SV------LTe~~~F~Gs-----~~dl~~vr~~~~~PiLrKDFIid~~QI~eAr~~GAD  130 (254)
T 1vc4_A           67 PVEAALAYARGGARA----V-SV------LTEPHRFGGS-----LLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGAS  130 (254)
T ss_dssp             HHHHHHHHHHTTCSE----E-EE------ECCCSSSCCC-----HHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHCCCCE----E-EE------ECCCCCCCCC-----HHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCC
T ss_conf             999999999879918----9-99------6587778987-----899999998618872027774769999999982862


Q ss_pred             EEEECHHHCCC--HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             78822576289--999999850597799836777899999999999972587808995146
Q gi|254780669|r  137 ILQIPALLCRQ--TDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERG  195 (301)
Q Consensus       137 ilQIgA~~~rq--tdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG  195 (301)
                      .+-+-|.+..+  .+|+..+.+.|--+++.=+   +.+|+    ++....|.+-|.+--|-
T Consensus       131 aiLLIaal~~~~l~~l~~~A~~lGle~LVEvh---~~~El----~~a~~~~a~iIGINnRd  184 (254)
T 1vc4_A          131 AALLIVALLGELTGAYLEEARRLGLEALVEVH---TEREL----EIALEAGAEVLGINNRD  184 (254)
T ss_dssp             EEEEEHHHHGGGHHHHHHHHHHHTCEEEEEEC---SHHHH----HHHHHHTCSEEEEESBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC---CHHHH----HHHHCCCCCEEEEECCC
T ss_conf             79999998788899999999984886278707---88897----24223899789873577