HHsearch results for GI: 254780669 and protein with PDBid: 1vhn_A

>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=95.54  E-value=0.068  Score=31.91  Aligned_cols=111  Identities=14%  Similarity=0.213  Sum_probs=65.7

Q ss_pred             ECHHHCCCHHHHHHHH-----HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHH
Q ss_conf             2257628999999985-----05977998367778999999999999725878089951465444010000000106888
Q gi|254780669|r  140 IPALLCRQTDLLTAAA-----QTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMT  214 (301)
Q Consensus       140 IgA~~~rqtdLl~a~a-----~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk  214 (301)
                      -||.++++.+++.++-     .++.||-+|=-..-+.+++...+..+.+.|...+.+--|=-.-+|.. ..|...++.+|
T Consensus       103 ~Ga~Ll~~p~~~~~iv~~~~~~~~~pvsvK~RlG~d~~~~~~~~~~l~~~G~~~ltiH~Rt~~q~y~g-~~~w~~I~~~k  181 (318)
T 1vhn_A          103 AGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTG-RAEWKALSVLE  181 (318)
T ss_dssp             CGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSS-CCCGGGGGGSC
T ss_pred             CCCCHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHCCCCC-CCHHHHHHHHH
T ss_conf             73135325378999975321115884211141276621467999999982864677630002206775-10167899987


Q ss_pred             HHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE--ECCCH
Q ss_conf             5187168711777421223453212638899999999997189889998--36983
Q gi|254780669|r  215 SMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE--THQDP  268 (301)
Q Consensus       215 ~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE--~Hp~P  268 (301)
                      + .+|||.           +|+.. ...++..-+    -..|+||+|+=  .--||
T Consensus       182 ~-~iPvi~-----------NGdI~-s~~da~~~l----~~tg~dGVMIGRgal~nP  220 (318)
T 1vhn_A          182 K-RIPTFV-----------SGDIF-TPEDAKRAL----EESGCDGLLVARGAIGRP  220 (318)
T ss_dssp             C-SSCEEE-----------ESSCC-SHHHHHHHH----HHHCCSEEEESGGGTTCT
T ss_pred             C-CCCCCC-----------CCCCC-CHHHHHHHH----HHHCCCEEEECHHHHHCC
T ss_conf             1-586101-----------58869-999999998----723899799717657197