HHsearch results for GI: 254780669 and protein with PDBid: 1vr6_A
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for structural genomics, JCSG; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A*
Probab=100.00 E-value=0 Score=668.22 Aligned_cols=269 Identities=28% Similarity=0.488 Sum_probs=254.8
Q ss_pred CCCCCCCHHHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 97775203445430468761783177068357877279769970699954863499999999999999965533997066
Q gi|254780669|r 1 MHILYPQNLEEKQRRIDKNHMIHTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVY 80 (301)
Q Consensus 1 ~~i~~pykl~~~~~~i~~~~~~~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~if 80 (301)
+||++||||++|+++.+. +.+++ ++++|||++ |++|||||++||+||++++|+.+++++.+++|+++|
T Consensus 75 ~~i~~pykl~sr~~~~~~-------s~i~v----~~v~iG~~~-l~lIAGPC~vEs~e~~~~~A~~lk~~g~~~~r~g~f 142 (350)
T 1vr6_A 75 VRVLKPYKLVSREFHPED-------TVIDL----GDVKIGNGY-FTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAY 142 (350)
T ss_dssp EECSCSCCTTBTTTCCSC-------CCEEC----SSCEESTTE-EEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSC
T ss_pred EECCCCHHHHHCCCCCCC-------CEEEE----CCEEECCCC-EEEEECCCHHCCHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 775875334423138899-------78997----999988976-689975263258999999999989834101346630
Q ss_pred ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCE
Q ss_conf 01557688666322245671248889998866528768852288999987650215788225762899999998505977
Q gi|254780669|r 81 KSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRV 160 (301)
Q Consensus 81 K~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kp 160 (301)
|| |||++||||+| ++||+||+++|++||+||+||||+++|++.+++++||||||||||||||||+|+|+|+||
T Consensus 143 Kp------RTsp~sfqG~G-e~GL~iL~~vk~~~glpiiTdVh~~~qv~~vae~vDiLQIpA~l~~n~dLL~aag~t~kp 215 (350)
T 1vr6_A 143 KP------RTSPYSFQGLG-EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKP 215 (350)
T ss_dssp CC------CCSTTSCCCCT-HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSC
T ss_pred CC------CCCCCCCCCCC-HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEECCHHCCCHHHHHHHHHCCCC
T ss_conf 15------67873356760-889999999998659806898433253788750031699760213787999998851994
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCC
Q ss_conf 9983677789999999999997258780899514654--440100000001068885-1871687117774212234532
Q gi|254780669|r 161 INVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTS--FGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNC 237 (301)
Q Consensus 161 V~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~--fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~ 237 (301)
||||||||+|++||++|+||+.+.||+||||||||++ |+|+++++|++++|+||+ +++|||+|||||+
T Consensus 216 V~lKkG~~~s~~e~l~aaE~i~~~GN~~viLcERG~~tf~~~~r~~lD~~~i~~~k~~t~lPVI~DpSHs~--------- 286 (350)
T 1vr6_A 216 VLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSG--------- 286 (350)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHH---------
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHCCHHHHHCCCCCEEECCCCCC---------
T ss_conf 89417554899998778999973599649998577345577770584011127888567997798998888---------
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 12638899999999997189889998369833479782018688999999999999999885
Q gi|254780669|r 238 SGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIK 299 (301)
Q Consensus 238 ~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~vk 299 (301)
|+|+||++|||||+|+|+||||+||||||++|+|||+|||+|++|++|++++++|+++|.
T Consensus 287 --G~r~~v~~larAAvA~GaDGlfiE~Hp~P~~AlsDg~q~l~l~~l~~ll~~l~~i~~~vg 346 (350)
T 1vr6_A 287 --GRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKLADALG 346 (350)
T ss_dssp --CSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf --775169999999998299889997088801078884024799999999999999999966