HHsearch results for GI: 254780669 and protein with PDBid: 1vr6_A

>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for structural genomics, JCSG; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A*
Probab=100.00  E-value=0  Score=668.22  Aligned_cols=269  Identities=28%  Similarity=0.488  Sum_probs=254.8

Q ss_pred             CCCCCCCHHHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             97775203445430468761783177068357877279769970699954863499999999999999965533997066
Q gi|254780669|r    1 MHILYPQNLEEKQRRIDKNHMIHTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVY   80 (301)
Q Consensus         1 ~~i~~pykl~~~~~~i~~~~~~~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~if   80 (301)
                      +||++||||++|+++.+.       +.+++    ++++|||++ |++|||||++||+||++++|+.+++++.+++|+++|
T Consensus        75 ~~i~~pykl~sr~~~~~~-------s~i~v----~~v~iG~~~-l~lIAGPC~vEs~e~~~~~A~~lk~~g~~~~r~g~f  142 (350)
T 1vr6_A           75 VRVLKPYKLVSREFHPED-------TVIDL----GDVKIGNGY-FTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAY  142 (350)
T ss_dssp             EECSCSCCTTBTTTCCSC-------CCEEC----SSCEESTTE-EEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSC
T ss_pred             EECCCCHHHHHCCCCCCC-------CEEEE----CCEEECCCC-EEEEECCCHHCCHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf             775875334423138899-------78997----999988976-689975263258999999999989834101346630


Q ss_pred             ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCE
Q ss_conf             01557688666322245671248889998866528768852288999987650215788225762899999998505977
Q gi|254780669|r   81 KSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRV  160 (301)
Q Consensus        81 K~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kp  160 (301)
                      ||      |||++||||+| ++||+||+++|++||+||+||||+++|++.+++++||||||||||||||||+|+|+|+||
T Consensus       143 Kp------RTsp~sfqG~G-e~GL~iL~~vk~~~glpiiTdVh~~~qv~~vae~vDiLQIpA~l~~n~dLL~aag~t~kp  215 (350)
T 1vr6_A          143 KP------RTSPYSFQGLG-EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKP  215 (350)
T ss_dssp             CC------CCSTTSCCCCT-HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSC
T ss_pred             CC------CCCCCCCCCCC-HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEECCHHCCCHHHHHHHHHCCCC
T ss_conf             15------67873356760-889999999998659806898433253788750031699760213787999998851994


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCC
Q ss_conf             9983677789999999999997258780899514654--440100000001068885-1871687117774212234532
Q gi|254780669|r  161 INVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTS--FGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNC  237 (301)
Q Consensus       161 V~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~--fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~  237 (301)
                      ||||||||+|++||++|+||+.+.||+||||||||++  |+|+++++|++++|+||+ +++|||+|||||+         
T Consensus       216 V~lKkG~~~s~~e~l~aaE~i~~~GN~~viLcERG~~tf~~~~r~~lD~~~i~~~k~~t~lPVI~DpSHs~---------  286 (350)
T 1vr6_A          216 VLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSG---------  286 (350)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHH---------
T ss_pred             EEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHCCHHHHHCCCCCEEECCCCCC---------
T ss_conf             89417554899998778999973599649998577345577770584011127888567997798998888---------


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             12638899999999997189889998369833479782018688999999999999999885
Q gi|254780669|r  238 SGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIK  299 (301)
Q Consensus       238 ~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~vk  299 (301)
                        |+|+||++|||||+|+|+||||+||||||++|+|||+|||+|++|++|++++++|+++|.
T Consensus       287 --G~r~~v~~larAAvA~GaDGlfiE~Hp~P~~AlsDg~q~l~l~~l~~ll~~l~~i~~~vg  346 (350)
T 1vr6_A          287 --GRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKLADALG  346 (350)
T ss_dssp             --CSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHHHHHHT
T ss_pred             --CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             --775169999999998299889997088801078884024799999999999999999966