Query gi|254780669|ref|YP_003065082.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 301
No_of_seqs 160 out of 1628
Neff 5.0
Searched_HMMs 23785
Date Tue May 31 17:56:43 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780669.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nwr_A 2-dehydro-3-deoxyphosph 100.0 0 0 673.0 24.8 257 43-300 2-259 (267)
2 1vr6_A Phospho-2-dehydro-3-deo 100.0 0 0 668.2 28.0 269 1-299 75-346 (350)
3 1zco_A 2-dehydro-3-deoxyphosph 100.0 0 0 619.3 25.5 247 25-295 10-259 (262)
4 3nvt_A 3-deoxy-D-arabino-heptu 100.0 0 0 590.9 25.9 268 4-301 114-384 (385)
5 3fs2_A 2-dehydro-3-deoxyphosph 100.0 0 0 542.1 28.5 279 19-301 20-298 (298)
6 1vs1_A 3-deoxy-7-phosphoheptul 100.0 0 0 464.8 25.3 262 4-296 10-274 (276)
7 1o60_A 2-dehydro-3-deoxyphosph 100.0 0 0 351.9 26.4 274 24-301 2-277 (292)
8 2qkf_A 3-deoxy-D-manno-octulos 100.0 0 0 342.2 25.3 266 35-300 6-273 (280)
9 1n8f_A DAHP synthetase; (beta/ 99.8 1.7E-18 7.2E-23 141.1 21.1 249 36-299 45-346 (350)
10 1of8_A Phospho-2-dehydro-3-deo 99.8 3.7E-18 1.6E-22 138.9 21.5 244 36-291 60-357 (370)
11 1vli_A Spore coat polysacchari 99.5 8.8E-11 3.7E-15 90.4 26.7 252 23-299 11-284 (385)
12 2wqp_A Polysialic acid capsule 99.5 3.9E-10 1.6E-14 86.1 25.5 246 24-298 3-271 (349)
13 3g8r_A Probable spore coat pol 99.3 8.7E-09 3.7E-13 77.2 22.1 231 46-298 7-259 (350)
14 1tx2_A DHPS, dihydropteroate s 95.6 0.14 5.8E-06 29.9 15.0 203 56-269 61-280 (297)
15 1tlt_A Putative oxidoreductase 95.6 0.055 2.3E-06 32.5 7.8 75 107-187 44-118 (319)
16 3dty_A Oxidoreductase, GFO/IDH 95.6 0.028 1.2E-06 34.4 6.3 82 106-187 53-138 (398)
17 1vhn_A Putative flavin oxidore 95.5 0.068 2.9E-06 31.9 8.1 111 140-268 103-220 (318)
18 3euw_A MYO-inositol dehydrogen 95.2 0.087 3.6E-06 31.2 7.8 76 106-186 41-117 (344)
19 3kgf_A Probable 3-deoxy-D-arab 95.2 0.19 8E-06 29.0 10.4 144 135-282 278-432 (464)
20 3moi_A Probable dehydrogenase; 95.0 0.07 3E-06 31.8 6.8 76 106-186 40-116 (387)
21 3igs_A N-acetylmannosamine-6-p 95.0 0.22 9.3E-06 28.6 10.9 162 55-264 33-211 (232)
22 3ec7_A Putative dehydrogenase; 94.8 0.18 7.7E-06 29.1 8.4 81 106-191 61-144 (357)
23 2nvw_A Galactose/lactose metab 94.4 0.18 7.8E-06 29.1 7.8 85 106-192 81-172 (479)
24 3cea_A MYO-inositol 2-dehydrog 94.4 0.26 1.1E-05 28.1 8.5 80 106-189 46-126 (346)
25 3khj_A Inosine-5-monophosphate 94.4 0.31 1.3E-05 27.6 11.7 168 46-263 47-236 (361)
26 1ydw_A AX110P-like protein; st 94.1 0.15 6.4E-06 29.6 6.8 80 105-186 42-123 (362)
27 3ezy_A Dehydrogenase; structur 94.1 0.35 1.5E-05 27.2 8.9 79 105-187 38-117 (344)
28 3oqb_A Oxidoreductase; structu 94.1 0.19 8.1E-06 28.9 7.3 76 106-185 58-134 (383)
29 2dqw_A Dihydropteroate synthas 94.0 0.37 1.6E-05 27.1 15.3 236 6-269 16-274 (294)
30 2ho3_A Oxidoreductase, GFO/IDH 93.7 0.29 1.2E-05 27.8 7.6 77 106-186 38-114 (325)
31 3e9m_A Oxidoreductase, GFO/IDH 93.7 0.2 8.3E-06 28.9 6.7 77 106-186 42-119 (330)
32 3i23_A Oxidoreductase, GFO/IDH 93.6 0.21 8.8E-06 28.7 6.7 74 108-186 43-117 (349)
33 2h9a_B CO dehydrogenase/acetyl 93.5 0.45 1.9E-05 26.5 14.3 226 23-262 12-292 (310)
34 1xea_A Oxidoreductase, GFO/IDH 93.5 0.29 1.2E-05 27.8 7.3 81 103-187 36-116 (323)
35 2o4u_X Dimeric dihydrodiol deh 93.1 0.27 1.1E-05 28.0 6.6 78 105-186 40-118 (334)
36 1pii_A N-(5'phosphoribosyl)ant 93.1 0.52 2.2E-05 26.1 12.3 148 102-290 144-302 (452)
37 1zh8_A Oxidoreductase; TM0312, 92.8 0.56 2.3E-05 25.9 9.3 77 106-186 57-134 (340)
38 3e18_A Oxidoreductase; dehydro 92.7 0.39 1.6E-05 27.0 7.0 70 112-186 47-117 (359)
39 3mz0_A Inositol 2-dehydrogenas 92.4 0.63 2.7E-05 25.5 7.8 82 106-190 40-122 (344)
40 1aj0_A DHPS, dihydropteroate s 92.3 0.65 2.7E-05 25.5 14.3 203 55-268 35-260 (282)
41 3noy_A 4-hydroxy-3-methylbut-2 92.1 0.69 2.9E-05 25.3 15.8 191 23-256 14-229 (366)
42 2glx_A 1,5-anhydro-D-fructose 92.0 0.71 3E-05 25.2 7.7 114 107-228 38-152 (332)
43 3ip3_A Oxidoreductase, putativ 91.9 0.72 3E-05 25.2 7.8 80 103-187 38-120 (337)
44 1vc4_A Indole-3-glycerol phosp 91.9 0.59 2.5E-05 25.8 7.1 113 60-195 67-184 (254)
45 3evn_A Oxidoreductase, GFO/IDH 91.8 0.29 1.2E-05 27.8 5.4 73 110-186 46-119 (329)
46 3o9z_A Lipopolysaccaride biosy 91.6 0.5 2.1E-05 26.2 6.5 55 132-186 70-124 (312)
47 2h9a_A Carbon monoxide dehydro 91.5 0.8 3.4E-05 24.9 17.4 220 24-271 60-300 (445)
48 3kux_A Putative oxidoreductase 91.4 0.39 1.6E-05 26.9 5.7 76 111-191 48-123 (352)
49 2vp8_A Dihydropteroate synthas 91.3 0.84 3.5E-05 24.7 12.9 201 56-269 63-293 (318)
50 1lc0_A Biliverdin reductase A; 91.2 0.42 1.8E-05 26.7 5.8 54 133-186 64-117 (294)
51 1s2w_A Phosphoenolpyruvate pho 91.2 0.8 3.4E-05 24.9 7.2 48 73-123 37-87 (295)
52 1zfj_A Inosine monophosphate d 90.9 0.92 3.9E-05 24.5 7.6 139 96-263 168-365 (491)
53 3m2t_A Probable dehydrogenase; 90.9 0.61 2.6E-05 25.7 6.3 78 105-187 42-121 (359)
54 3btv_A Galactose/lactose metab 90.7 0.6 2.5E-05 25.7 6.2 79 107-186 63-147 (438)
55 3gdo_A Uncharacterized oxidore 90.7 0.96 4E-05 24.3 8.0 74 109-187 43-118 (358)
56 2p2s_A Putative oxidoreductase 90.6 0.47 2E-05 26.4 5.5 101 59-186 16-118 (336)
57 2ze3_A DFA0005; organic waste 89.9 1.1 4.7E-05 23.9 15.9 159 105-269 8-194 (275)
58 1xm3_A Thiazole biosynthesis p 89.7 0.2 8.5E-06 28.8 3.0 167 47-264 15-208 (264)
59 3db2_A Putative NADPH-dependen 89.7 1.2 4.9E-05 23.8 8.1 77 106-187 42-119 (354)
60 2vef_A Dihydropteroate synthas 89.6 1.2 4.9E-05 23.8 13.1 203 56-269 31-288 (314)
61 3eoo_A Methylisocitrate lyase; 87.8 1.5 6.5E-05 23.0 16.0 87 107-194 14-120 (298)
62 3hgj_A Chromate reductase; TIM 87.7 1.6 6.6E-05 23.0 7.2 113 134-263 165-318 (349)
63 3m5v_A DHDPS, dihydrodipicolin 87.6 1.6 6.7E-05 22.9 7.1 57 56-123 26-85 (301)
64 2e6f_A Dihydroorotate dehydrog 87.3 1.6 6.9E-05 22.8 9.9 103 93-195 71-197 (314)
65 1h6d_A Precursor form of gluco 87.0 0.92 3.9E-05 24.5 5.0 54 133-186 149-202 (433)
66 3n9r_A Fructose-bisphosphate a 86.9 1.7 7.3E-05 22.7 7.7 151 56-222 26-209 (307)
67 1z41_A YQJM, probable NADH-dep 86.9 1.7 7.3E-05 22.7 7.3 97 149-263 199-307 (338)
68 3c1a_A Putative oxidoreductase 86.7 1.6 6.7E-05 22.9 6.1 67 115-186 54-121 (315)
69 3f4l_A Putative oxidoreductase 86.2 1.7 7.3E-05 22.7 6.0 72 110-186 44-117 (345)
70 2ixa_A Alpha-N-acetylgalactosa 86.2 1.9 7.9E-05 22.4 8.1 90 102-192 56-148 (444)
71 2qr6_A IMP dehydrogenase/GMP r 84.7 1.6 6.7E-05 22.9 5.3 114 127-264 170-307 (393)
72 3e82_A Putative oxidoreductase 83.8 2.3 9.6E-05 21.9 5.8 68 115-187 52-120 (364)
73 1ep3_A Dihydroorotate dehydrog 83.6 2.2 9.2E-05 22.0 5.6 152 94-264 75-271 (311)
74 2htm_A Thiazole biosynthesis p 82.8 2.5 0.00011 21.6 5.6 175 47-264 15-208 (268)
75 3fa4_A 2,3-dimethylmalate lyas 82.6 2.7 0.00011 21.4 16.2 77 116-193 19-116 (302)
76 1rd5_A Tryptophan synthase alp 82.0 2.8 0.00012 21.3 8.3 219 46-293 23-259 (262)
77 1gvf_A Tagatose-bisphosphate a 81.0 3.1 0.00013 21.0 6.1 177 56-264 27-233 (286)
78 1h5y_A HISF; histidine biosynt 81.0 3.1 0.00013 21.0 9.9 184 61-290 36-246 (253)
79 1xxx_A DHDPS, dihydrodipicolin 80.2 3.2 0.00014 20.9 8.2 90 46-166 85-176 (303)
80 2rfg_A Dihydrodipicolinate syn 79.9 3.3 0.00014 20.8 8.0 113 45-192 70-184 (297)
81 1mxs_A KDPG aldolase; 2-keto-3 78.8 3.6 0.00015 20.6 8.5 109 54-191 34-145 (225)
82 1a53_A IGPS, indole-3-glycerol 78.8 3.6 0.00015 20.6 6.4 144 89-265 82-234 (247)
83 2yxg_A DHDPS, dihydrodipicolin 78.7 3.6 0.00015 20.6 8.1 61 45-119 70-130 (289)
84 1wv2_A Thiazole moeity, thiazo 78.4 3.7 0.00015 20.5 6.1 191 24-264 7-217 (265)
85 3civ_A Endo-beta-1,4-mannanase 78.1 3.7 0.00016 20.5 12.1 62 58-123 53-118 (343)
86 3oix_A Putative dihydroorotate 78.0 3.8 0.00016 20.4 8.5 145 35-191 43-226 (345)
87 3oa2_A WBPB; oxidoreductase, s 77.0 4 0.00017 20.3 5.7 56 132-187 71-126 (318)
88 3ju7_A Putative PLP-dependent 76.8 4.1 0.00017 20.2 6.7 113 108-229 43-167 (377)
89 2z9v_A Aspartate aminotransfer 76.8 3.2 0.00013 21.0 4.5 86 135-228 86-175 (392)
90 2hmc_A AGR_L_411P, dihydrodipi 76.8 4.1 0.00017 20.2 8.6 114 46-192 94-211 (344)
91 3fhl_A Putative oxidoreductase 76.7 4.1 0.00017 20.2 6.9 59 133-192 64-122 (362)
92 1ka9_F Imidazole glycerol phos 76.7 4.1 0.00017 20.2 9.5 185 60-290 33-244 (252)
93 2isw_A Putative fructose-1,6-b 75.7 3 0.00013 21.1 4.2 121 99-223 58-210 (323)
94 1f6y_A 5-methyltetrahydrofolat 75.3 4.5 0.00019 20.0 14.6 191 54-266 21-232 (262)
95 2z67_A O-phosphoseryl-tRNA(SEC 74.9 4.6 0.00019 19.9 10.6 106 146-265 185-297 (456)
96 1i4n_A Indole-3-glycerol phosp 74.4 3.1 0.00013 21.0 4.0 149 89-270 80-241 (251)
97 3elf_A Fructose-bisphosphate a 73.8 2.6 0.00011 21.5 3.5 33 167-199 180-213 (349)
98 3f0h_A Aminotransferase; RER07 73.6 2.7 0.00011 21.4 3.5 88 134-228 97-185 (376)
99 1o5k_A DHDPS, dihydrodipicolin 73.6 4.9 0.00021 19.7 8.2 24 100-123 64-89 (306)
100 3kru_A NADH:flavin oxidoreduct 72.5 5.2 0.00022 19.5 5.2 111 134-263 156-307 (343)
101 1vrd_A Inosine-5'-monophosphat 72.4 5.2 0.00022 19.5 5.9 143 97-263 173-369 (494)
102 1vhc_A Putative KHG/KDPG aldol 72.4 5.2 0.00022 19.5 9.6 108 55-191 26-136 (224)
103 1wbh_A KHG/KDPG aldolase; lyas 71.4 5.5 0.00023 19.4 9.2 109 54-191 24-135 (214)
104 1f6k_A N-acetylneuraminate lya 70.7 5.7 0.00024 19.3 8.8 113 45-192 74-188 (293)
105 1x60_A Sporulation-specific N- 70.5 4.5 0.00019 19.9 4.1 57 137-193 11-78 (79)
106 1zlp_A PSR132, petal death pro 69.6 6 0.00025 19.1 16.4 169 106-287 30-249 (318)
107 3lye_A Oxaloacetate acetyl hyd 69.4 6.1 0.00026 19.1 16.2 142 115-269 25-204 (307)
108 1d3g_A Dihydroorotate dehydrog 69.2 6.1 0.00026 19.1 11.6 147 36-194 56-256 (367)
109 3ffr_A Phosphoserine aminotran 69.0 4.5 0.00019 20.0 3.8 87 133-228 84-172 (362)
110 3i65_A Dihydroorotate dehydrog 68.2 6.4 0.00027 18.9 7.3 66 129-195 206-306 (415)
111 3daq_A DHDPS, dihydrodipicolin 67.9 6.5 0.00027 18.9 8.6 108 46-188 73-182 (292)
112 2gou_A Oxidoreductase, FMN-bin 67.9 4.3 0.00018 20.1 3.5 18 60-77 83-100 (365)
113 1eye_A DHPS 1, dihydropteroate 67.8 6.5 0.00027 18.9 13.7 206 54-270 25-260 (280)
114 1bif_A 6-phosphofructo-2-kinas 67.7 4.4 0.00018 20.0 3.5 14 113-126 121-134 (469)
115 1m3u_A 3-methyl-2-oxobutanoate 67.3 6.7 0.00028 18.8 14.5 155 104-268 6-186 (264)
116 1jcn_A Inosine monophosphate d 66.8 6.8 0.00029 18.8 9.4 138 97-263 191-387 (514)
117 3dz1_A Dihydrodipicolinate syn 66.7 6.9 0.00029 18.7 8.5 106 46-183 78-188 (313)
118 1xky_A Dihydrodipicolinate syn 64.2 7.6 0.00032 18.4 8.4 90 46-166 83-174 (301)
119 2r8w_A AGR_C_1641P; APC7498, d 64.0 7.7 0.00032 18.4 8.4 49 101-166 146-196 (332)
120 1rvg_A Fructose-1,6-bisphospha 63.5 7.9 0.00033 18.4 6.3 188 56-264 26-254 (305)
121 1y0e_A Putative N-acetylmannos 61.2 8.6 0.00036 18.1 7.3 165 54-264 19-205 (223)
122 3eol_A Isocitrate lyase; seatt 60.8 8.8 0.00037 18.0 7.8 153 106-290 52-209 (433)
123 1tv5_A Dhodehase, dihydroorota 60.6 8.9 0.00037 18.0 7.2 38 158-195 297-334 (443)
124 3a5f_A Dihydrodipicolinate syn 60.5 8.9 0.00037 18.0 7.9 92 45-167 71-164 (291)
125 3jr2_A Hexulose-6-phosphate sy 60.5 8.9 0.00037 18.0 9.4 178 44-264 7-195 (218)
126 3lab_A Putative KDPG (2-keto-3 59.5 9.2 0.00039 17.9 8.4 110 55-192 22-139 (217)
127 2vc6_A MOSA, dihydrodipicolina 59.3 9.3 0.00039 17.9 6.5 61 45-119 70-130 (292)
128 1cs1_A CGS, protein (cystathio 59.2 9.3 0.00039 17.9 5.4 109 148-272 105-239 (386)
129 3cwo_X Beta/alpha-barrel prote 59.2 9.3 0.00039 17.9 7.7 158 98-289 36-221 (237)
130 2r91_A 2-keto-3-deoxy-(6-phosp 58.5 9.6 0.0004 17.8 8.5 88 48-166 68-155 (286)
131 3b4u_A Dihydrodipicolinate syn 58.0 9.8 0.00041 17.7 8.6 19 138-156 139-159 (294)
132 1ad1_A DHPS, dihydropteroate s 57.9 9.8 0.00041 17.7 15.7 205 55-269 23-244 (266)
133 3ih1_A Methylisocitrate lyase; 57.6 9.9 0.00042 17.7 16.3 87 107-194 21-126 (305)
134 1thf_D HISF protein; thermophI 57.3 10 0.00042 17.7 10.0 185 60-290 32-243 (253)
135 1r30_A Biotin synthase; SAM ra 56.4 10 0.00044 17.6 9.1 182 54-264 98-311 (369)
136 3id7_A Dipeptidase; streptomyc 55.7 11 0.00045 17.5 4.1 18 178-195 135-152 (400)
137 2ehh_A DHDPS, dihydrodipicolin 55.6 11 0.00045 17.5 8.2 100 45-176 70-172 (294)
138 2v9d_A YAGE; dihydrodipicolini 55.1 11 0.00046 17.4 8.8 24 99-122 82-107 (343)
139 1uta_A FTSN, MSGA, cell divisi 55.0 3.2 0.00013 20.9 1.0 27 166-192 51-77 (81)
140 1jub_A Dihydroorotate dehydrog 54.7 11 0.00046 17.4 12.6 146 36-192 8-192 (311)
141 2v82_A 2-dehydro-3-deoxy-6-pho 54.6 11 0.00047 17.4 11.5 108 55-191 16-127 (212)
142 3noe_A DAP-A, dihydrodipicolin 54.0 11 0.00048 17.3 7.7 111 47-192 73-185 (292)
143 2og2_A Putative signal recogni 52.2 12 0.00051 17.1 9.4 93 47-156 161-264 (359)
144 1xg4_A Probable methylisocitra 51.6 12 0.00052 17.1 15.9 87 107-193 9-115 (295)
145 1w3i_A EDA, 2-keto-3-deoxy glu 51.4 12 0.00052 17.0 7.8 79 56-166 76-156 (293)
146 2pcq_A Putative dihidrodipicol 51.3 12 0.00052 17.0 7.3 94 47-173 65-160 (283)
147 2rag_A Dipeptidase; aminohydro 51.2 13 0.00053 17.0 4.0 51 144-196 136-189 (417)
148 1rj9_A FTSY, signal recognitio 50.9 13 0.00053 17.0 9.6 157 44-223 103-280 (304)
149 2ojp_A DHDPS, dihydrodipicolin 49.8 13 0.00055 16.9 7.1 19 148-166 145-163 (292)
150 1geq_A Tryptophan synthase alp 49.7 13 0.00055 16.9 7.8 192 46-266 10-223 (248)
151 3gz3_A Dihydroorotate dehydrog 49.2 13 0.00056 16.8 10.4 146 25-184 36-219 (354)
152 3nyt_A Aminotransferase WBPE; 47.9 14 0.00059 16.7 4.0 111 105-228 39-161 (367)
153 2ebn_A Endo-beta-N-acetylgluco 46.5 15 0.00062 16.5 7.5 61 50-115 99-164 (289)
154 2e7j_A SEP-tRNA:Cys-tRNA synth 45.2 15 0.00065 16.4 3.9 78 148-228 104-188 (371)
155 1dos_A Aldolase class II; lyas 44.6 7.5 0.00031 18.5 1.5 150 99-264 85-289 (358)
156 2qy9_A Cell division protein F 44.3 16 0.00067 16.3 10.7 155 45-222 101-276 (309)
157 1o66_A 3-methyl-2-oxobutanoate 44.1 16 0.00068 16.3 14.6 154 104-268 6-186 (275)
158 1yxy_A Putative N-acetylmannos 43.9 16 0.00068 16.3 10.0 137 105-264 59-216 (234)
159 3gr7_A NADPH dehydrogenase; fl 43.7 16 0.00068 16.3 7.8 97 149-263 199-307 (340)
160 3hje_A 704AA long hypothetical 43.4 16 0.00069 16.2 4.2 63 58-122 15-84 (704)
161 3b8i_A PA4872 oxaloacetate dec 43.1 17 0.0007 16.2 15.7 152 105-270 11-195 (287)
162 1xx6_A Thymidine kinase; X-RAY 42.9 17 0.0007 16.2 5.1 44 44-92 9-52 (191)
163 1ps9_A 2,4-dienoyl-COA reducta 42.8 17 0.00071 16.2 6.5 17 252-268 392-408 (671)
164 3ez4_A 3-methyl-2-oxobutanoate 42.5 17 0.00071 16.2 13.5 156 103-268 11-192 (269)
165 1f8m_A Isocitrate lyase, ICL; 41.8 17 0.00073 16.1 8.2 156 102-289 52-211 (429)
166 1wa3_A 2-keto-3-deoxy-6-phosph 41.6 17 0.00074 16.1 9.2 110 53-191 17-130 (205)
167 3cpr_A Dihydrodipicolinate syn 41.5 18 0.00074 16.1 8.5 93 45-168 86-180 (304)
168 2nuw_A 2-keto-3-deoxygluconate 41.3 18 0.00074 16.0 7.7 52 56-120 76-128 (288)
169 1pcf_A P15, transcriptional co 41.3 17 0.00072 16.1 2.9 26 276-301 41-66 (66)
170 2i5g_A Amidohydrolase; NYSGXRC 40.9 18 0.00075 16.0 4.6 136 45-191 89-246 (325)
171 3flu_A DHDPS, dihydrodipicolin 40.4 18 0.00077 15.9 8.5 112 46-192 78-191 (297)
172 1fc4_A 2-amino-3-ketobutyrate 40.1 18 0.00078 15.9 5.7 138 90-233 80-223 (401)
173 3ivs_A Homocitrate synthase, m 39.2 19 0.0008 15.8 12.6 174 52-260 55-252 (423)
174 1nqk_A Alkanesulfonate monooxy 38.8 19 0.00081 15.8 3.8 26 238-263 305-330 (381)
175 3btn_A Antizyme inhibitor 1; T 38.4 20 0.00082 15.7 4.2 143 45-196 107-274 (448)
176 3ffs_A Inosine-5-monophosphate 38.2 20 0.00083 15.7 5.4 114 122-262 143-274 (400)
177 1p9l_A Dihydrodipicolinate red 38.0 20 0.00084 15.7 4.6 11 218-228 97-107 (245)
178 2f6u_A GGGPS, (S)-3-O-geranylg 37.4 20 0.00085 15.6 5.9 53 188-264 165-219 (234)
179 2axn_A 6-phosphofructo-2-kinas 36.6 21 0.00087 15.6 2.8 27 169-196 361-391 (520)
180 1vzw_A Phosphoribosyl isomeras 36.6 21 0.00088 15.6 10.4 187 61-289 35-240 (244)
181 2fuv_A Phosphoglucomutase; str 36.2 21 0.00089 15.5 4.2 179 56-268 60-267 (549)
182 1m5w_A Pyridoxal phosphate bio 36.2 21 0.00089 15.5 2.9 17 124-140 137-154 (243)
183 1yad_A Regulatory protein TENI 35.8 21 0.0009 15.5 3.5 183 36-271 10-204 (221)
184 2o7s_A DHQ-SDH, bifunctional 3 35.6 22 0.00091 15.5 10.1 129 46-192 5-154 (523)
185 3nav_A Tryptophan synthase alp 35.0 22 0.00093 15.4 7.6 217 46-292 25-266 (271)
186 2aam_A Hypothetical protein TM 33.6 23 0.00098 15.3 4.7 99 147-261 165-278 (309)
187 2yw3_A 4-hydroxy-2-oxoglutarat 33.6 23 0.00098 15.2 7.8 107 55-191 22-130 (207)
188 3jxe_A Tryptophanyl-tRNA synth 33.5 23 0.00098 15.2 2.8 24 58-81 131-154 (392)
189 1w1z_A Delta-aminolevulinic ac 32.8 24 0.001 15.2 5.7 111 5-126 5-128 (328)
190 3i4e_A Isocitrate lyase; struc 32.8 24 0.001 15.2 8.4 160 102-290 52-216 (439)
191 1gte_A Dihydropyrimidine dehyd 32.0 25 0.001 15.1 12.1 95 98-194 616-737 (1025)
192 3o6c_A PNP synthase, pyridoxin 31.9 25 0.001 15.1 3.0 96 143-269 50-156 (260)
193 1jvn_A Glutamine, bifunctional 31.5 25 0.0011 15.0 4.1 155 102-290 314-545 (555)
194 3frk_A QDTB; aminotransferase, 31.2 25 0.0011 15.0 6.8 114 102-228 37-162 (373)
195 2hjp_A Phosphonopyruvate hydro 31.0 26 0.0011 15.0 16.1 84 107-191 7-109 (290)
196 2l2q_A PTS system, cellobiose- 30.6 26 0.0011 14.9 3.2 61 106-166 23-84 (109)
197 3dv9_A Beta-phosphoglucomutase 30.5 18 0.00077 15.9 1.7 48 249-299 195-245 (247)
198 3eb2_A Putative dihydrodipicol 30.3 26 0.0011 14.9 9.1 91 45-166 74-166 (300)
199 1v5x_A PRA isomerase, phosphor 30.2 26 0.0011 14.9 5.2 193 52-295 6-200 (203)
200 1e2b_A Enzyme IIB-cellobiose; 30.0 17 0.00072 16.1 1.5 56 107-163 23-78 (106)
201 2qiw_A PEP phosphonomutase; NP 29.9 27 0.0011 14.9 12.6 177 105-287 10-228 (255)
202 3js3_A 3-dehydroquinate dehydr 29.8 27 0.0011 14.8 18.2 226 24-292 4-254 (258)
203 1qgn_A Protein (cystathionine 29.5 27 0.0011 14.8 4.0 189 70-272 64-301 (445)
204 1mdo_A ARNB aminotransferase; 29.0 17 0.0007 16.2 1.2 112 106-229 44-166 (393)
205 1zj6_A ADP-ribosylation factor 29.0 28 0.0012 14.8 3.3 13 47-59 20-32 (187)
206 2po3_A 4-dehydrase; external a 29.0 24 0.00099 15.2 2.0 174 105-290 56-262 (424)
207 2dr1_A PH1308 protein, 386AA l 28.8 28 0.0012 14.7 4.9 89 135-228 98-187 (386)
208 3gk0_A PNP synthase, pyridoxin 28.5 28 0.0012 14.7 3.1 153 103-298 40-210 (278)
209 1w5q_A Delta-aminolevulinic ac 28.2 29 0.0012 14.7 6.1 81 43-126 40-132 (337)
210 3l5l_A Xenobiotic reductase A; 28.0 29 0.0012 14.6 11.0 71 149-222 213-300 (363)
211 3ilk_A Uncharacterized tRNA/RR 27.9 29 0.0012 14.6 4.2 21 53-73 14-34 (244)
212 2w6r_A Imidazole glycerol phos 27.8 29 0.0012 14.6 8.8 166 60-263 32-229 (266)
213 3fkr_A L-2-keto-3-deoxyarabona 27.8 29 0.0012 14.6 8.8 99 46-172 79-179 (309)
214 3ewb_X 2-isopropylmalate synth 27.7 29 0.0012 14.6 11.2 111 155-289 131-250 (293)
215 2oga_A Transaminase; PLP-depen 27.6 29 0.0012 14.6 8.5 116 101-228 63-189 (399)
216 2wkj_A N-acetylneuraminate lya 27.4 30 0.0012 14.6 9.0 27 98-124 61-89 (303)
217 1vyr_A Pentaerythritol tetrani 27.0 30 0.0013 14.5 8.5 94 149-263 216-323 (364)
218 2bmb_A Folic acid synthesis pr 26.8 30 0.0013 14.5 11.5 205 55-269 246-529 (545)
219 2huf_A Alanine glyoxylate amin 26.8 30 0.0013 14.5 5.2 87 134-229 96-186 (393)
220 2vt1_B Surface presentation of 26.7 22 0.00093 15.4 1.5 67 76-156 6-73 (93)
221 1ibj_A CBL, cystathionine beta 26.3 31 0.0013 14.4 3.4 121 135-271 171-318 (464)
222 3bc8_A O-phosphoseryl-tRNA(SEC 26.2 31 0.0013 14.4 7.4 105 147-265 154-265 (450)
223 3k30_A Histamine dehydrogenase 25.9 31 0.0013 14.4 3.5 52 104-155 283-338 (690)
224 3nbm_A PTS system, lactose-spe 25.8 31 0.0013 14.4 3.3 60 107-166 26-86 (108)
225 2pod_A Mandelate racemase / mu 25.7 32 0.0013 14.4 5.9 58 157-223 213-271 (410)
226 2qq6_A Mandelate racemase/muco 25.7 32 0.0013 14.4 6.7 123 49-176 142-278 (410)
227 3dlu_A SRP19, signal recogniti 25.6 28 0.0012 14.7 1.9 50 218-267 7-59 (106)
228 1qwg_A PSL synthase;, (2R)-pho 25.4 32 0.0013 14.3 9.0 26 169-194 145-170 (251)
229 1a9x_A Carbamoyl phosphate syn 25.1 32 0.0014 14.3 4.4 149 111-269 108-291 (1073)
230 1dbt_A Orotidine 5'-phosphate 25.0 33 0.0014 14.3 11.5 64 121-184 11-80 (239)
231 2yyu_A Orotidine 5'-phosphate 24.9 33 0.0014 14.3 9.7 72 52-142 11-90 (246)
232 1f06_A MESO-diaminopimelate D- 24.9 33 0.0014 14.3 5.7 47 134-180 58-104 (320)
233 2qv6_A MJ0145, GTP cyclohydrol 24.9 33 0.0014 14.3 2.6 23 97-119 63-85 (268)
234 2z6i_A Trans-2-enoyl-ACP reduc 24.5 33 0.0014 14.2 12.5 134 104-264 52-192 (332)
235 2f9i_A Acetyl-coenzyme A carbo 24.5 32 0.0014 14.3 2.1 84 99-196 145-230 (327)
236 2cb1_A O-acetyl homoserine sul 24.4 33 0.0014 14.2 3.0 41 184-226 138-179 (412)
237 3ly0_A Dipeptidase AC. metallo 24.2 34 0.0014 14.2 4.8 27 241-267 282-308 (364)
238 2him_A L-asparaginase 1; hydro 23.8 34 0.0014 14.1 6.2 41 156-196 127-174 (358)
239 2vy9_A Anti-sigma-factor antag 23.7 2.2 9.3E-05 22.0 -4.0 25 247-271 66-90 (123)
240 2czd_A Orotidine 5'-phosphate 23.2 35 0.0015 14.1 7.6 90 54-163 8-105 (208)
241 3gka_A N-ethylmaleimide reduct 23.2 35 0.0015 14.1 3.4 17 246-262 298-315 (361)
242 2z0f_A Putative phosphoglucomu 23.2 35 0.0015 14.1 4.3 181 56-269 41-247 (524)
243 3crm_A TRNA delta(2)-isopenten 22.9 36 0.0015 14.0 2.7 86 43-133 5-112 (323)
244 2cqy_A Propionyl-COA carboxyla 22.8 36 0.0015 14.0 4.5 62 199-265 26-95 (108)
245 1w96_A ACC, acetyl-coenzyme A 22.6 36 0.0015 14.0 4.3 47 149-195 225-280 (554)
246 2vpq_A Acetyl-COA carboxylase; 22.6 36 0.0015 14.0 11.3 47 149-196 142-202 (451)
247 3ic5_A Putative saccharopine d 22.5 36 0.0015 14.0 5.9 45 118-162 53-97 (118)
248 3ajx_A 3-hexulose-6-phosphate 22.3 37 0.0015 14.0 9.4 179 52-271 7-198 (207)
249 1o94_A Tmadh, trimethylamine d 22.1 37 0.0016 13.9 5.0 53 103-155 279-335 (729)
250 2c81_A Glutamine-2-deoxy-scyll 21.9 37 0.0016 13.9 7.6 122 94-228 36-168 (418)
251 1ujp_A Tryptophan synthase alp 21.8 37 0.0016 13.9 6.1 191 46-266 21-232 (271)
252 2ekc_A AQ_1548, tryptophan syn 21.8 37 0.0016 13.9 7.6 212 46-292 22-257 (262)
253 3kgw_A Alanine-glyoxylate amin 21.5 38 0.0016 13.9 5.1 90 133-228 99-189 (393)
254 1w4r_A Thymidine kinase; type 21.5 38 0.0016 13.9 5.6 102 45-192 22-123 (195)
255 3o1n_A 3-dehydroquinate dehydr 21.4 38 0.0016 13.8 19.8 225 25-292 25-274 (276)
256 1o69_A Aminotransferase; struc 21.4 38 0.0016 13.8 10.1 118 102-228 33-160 (394)
257 2pa6_A Enolase; glycolysis, ly 21.4 38 0.0016 13.8 9.8 94 101-195 270-369 (427)
258 3lg3_A Isocitrate lyase; conse 21.2 38 0.0016 13.8 8.0 23 120-142 70-93 (435)
259 3hnn_A Putative diflavin flavo 21.1 20 0.00086 15.6 0.5 42 35-82 44-86 (262)
260 3dxi_A Putative aldolase; TIM 21.1 39 0.0016 13.8 4.2 184 56-267 22-220 (320)
261 2px0_A Flagellar biosynthesis 20.7 40 0.0017 13.7 9.8 159 41-222 103-271 (296)
262 2ip1_A Tryptophanyl-tRNA synth 20.6 40 0.0017 13.7 3.1 17 107-123 127-143 (432)
263 3hv0_A Tryptophanyl-tRNA synth 20.5 40 0.0017 13.7 3.4 17 109-125 101-117 (393)
264 1qop_A Tryptophan synthase alp 20.4 40 0.0017 13.7 7.5 217 46-292 22-263 (268)
265 4pga_A Glutaminase-asparaginas 20.4 40 0.0017 13.7 4.9 18 248-265 237-254 (337)
266 2ch1_A 3-hydroxykynurenine tra 20.3 40 0.0017 13.7 4.9 148 43-228 18-184 (396)
No 1
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=100.00 E-value=0 Score=672.97 Aligned_cols=257 Identities=48% Similarity=0.843 Sum_probs=251.2
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE
Q ss_conf 706999548634999999999999999655339-9706601557688666322245671248889998866528768852
Q gi|254780669|r 43 QRFVLIAGPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTD 121 (301)
Q Consensus 43 ~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~Te 121 (301)
++|++||||||+||+||++++|+.++++++++. ++++||+||||+|||||+||||+|+++||+||+++|++||+||+||
T Consensus 2 ~~~~iIAGPCsvEs~e~~~~~A~~lk~~~~~~~~~~~i~r~~~~K~nRTsp~sf~G~G~e~gL~~l~~ik~~~gl~v~TE 81 (267)
T 2nwr_A 2 EKFLVIAGPNAIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKEEFGLKITTD 81 (267)
T ss_dssp CCEEEEEECSBCSCHHHHHHHHHHHHHHHHHCTTEEEEEECBSCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEH
T ss_conf 87549950782049999999999999999860777647525777877898765567878999999999999839843103
Q ss_pred CCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf 28899998765021578822576289999999850597799836777899999999999972587808995146544401
Q gi|254780669|r 122 VHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYN 201 (301)
Q Consensus 122 V~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~ 201 (301)
||+++|+|.+++++|+|||||||||||+||+++|+|+|||++|||||+|++||++|+||+.+.||++|++||||++|||+
T Consensus 82 V~~~~~ve~~~e~vDilQIgAr~~~n~~Ll~~~a~t~kpV~lKkg~~~s~~e~~~a~e~i~~~Gn~~v~lceRG~~~~y~ 161 (267)
T 2nwr_A 82 IHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTFGYN 161 (267)
T ss_dssp CSSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHTTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf 32056688999760098876888059899999986398423334566898888749999996799879995376446764
Q ss_pred HHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCH
Q ss_conf 00000001068885187168711777421223453212638899999999997189889998369833479782018688
Q gi|254780669|r 202 TLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINI 281 (301)
Q Consensus 202 ~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l 281 (301)
++++|+|+++.||+.. |||+|||||+|+|++.++.++|+|+|++++|+||+++|+|||||||||||++|||||+|||+|
T Consensus 162 ~l~~d~~~~~~~k~~~-~vi~D~shs~q~p~~~~~~s~G~r~~v~~la~aA~a~G~dGl~iE~H~dP~~AlsD~~q~l~~ 240 (267)
T 2nwr_A 162 NLVVDFRSLPIMKQWA-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPEPEKALSDASTQLPL 240 (267)
T ss_dssp CEECCTTHHHHHTTTS-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEESCGGGCSSCTTTCEEG
T ss_pred CCCCCHHHHHHHHHCC-CCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCH
T ss_conf 3243104469987357-520016745568888787310107669999999998399879998379834367860027799
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999998851
Q gi|254780669|r 282 KDLPKLLSQLLAIDKIIKP 300 (301)
Q Consensus 282 ~~l~~ll~~l~~i~~~vk~ 300 (301)
++|++|++++++|++++++
T Consensus 241 ~~l~~ll~~l~~i~~~~~k 259 (267)
T 2nwr_A 241 SQLEGIIEAILEIREVASK 259 (267)
T ss_dssp GGHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999984
No 2
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for structural genomics, JCSG; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A*
Probab=100.00 E-value=0 Score=668.22 Aligned_cols=269 Identities=28% Similarity=0.488 Sum_probs=254.8
Q ss_pred CCCCCCCHHHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 97775203445430468761783177068357877279769970699954863499999999999999965533997066
Q gi|254780669|r 1 MHILYPQNLEEKQRRIDKNHMIHTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVY 80 (301)
Q Consensus 1 ~~i~~pykl~~~~~~i~~~~~~~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~if 80 (301)
+||++||||++|+++.+. +.+++ ++++|||++ |++|||||++||+||++++|+.+++++.+++|+++|
T Consensus 75 ~~i~~pykl~sr~~~~~~-------s~i~v----~~v~iG~~~-l~lIAGPC~vEs~e~~~~~A~~lk~~g~~~~r~g~f 142 (350)
T 1vr6_A 75 VRVLKPYKLVSREFHPED-------TVIDL----GDVKIGNGY-FTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAY 142 (350)
T ss_dssp EECSCSCCTTBTTTCCSC-------CCEEC----SSCEESTTE-EEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSC
T ss_pred EECCCCHHHHHCCCCCCC-------CEEEE----CCEEECCCC-EEEEECCCHHCCHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 775875334423138899-------78997----999988976-689975263258999999999989834101346630
Q ss_pred ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCE
Q ss_conf 01557688666322245671248889998866528768852288999987650215788225762899999998505977
Q gi|254780669|r 81 KSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRV 160 (301)
Q Consensus 81 K~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kp 160 (301)
|| |||++||||+| ++||+||+++|++||+||+||||+++|++.+++++||||||||||||||||+|+|+|+||
T Consensus 143 Kp------RTsp~sfqG~G-e~GL~iL~~vk~~~glpiiTdVh~~~qv~~vae~vDiLQIpA~l~~n~dLL~aag~t~kp 215 (350)
T 1vr6_A 143 KP------RTSPYSFQGLG-EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKP 215 (350)
T ss_dssp CC------CCSTTSCCCCT-HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSC
T ss_pred CC------CCCCCCCCCCC-HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEECCHHCCCHHHHHHHHHCCCC
T ss_conf 15------67873356760-889999999998659806898433253788750031699760213787999998851994
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCC
Q ss_conf 9983677789999999999997258780899514654--440100000001068885-1871687117774212234532
Q gi|254780669|r 161 INVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTS--FGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNC 237 (301)
Q Consensus 161 V~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~--fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~ 237 (301)
||||||||+|++||++|+||+.+.||+||||||||++ |+|+++++|++++|+||+ +++|||+|||||+
T Consensus 216 V~lKkG~~~s~~e~l~aaE~i~~~GN~~viLcERG~~tf~~~~r~~lD~~~i~~~k~~t~lPVI~DpSHs~--------- 286 (350)
T 1vr6_A 216 VLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSG--------- 286 (350)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHH---------
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHCCHHHHHCCCCCEEECCCCCC---------
T ss_conf 89417554899998778999973599649998577345577770584011127888567997798998888---------
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 12638899999999997189889998369833479782018688999999999999999885
Q gi|254780669|r 238 SGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIK 299 (301)
Q Consensus 238 ~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~vk 299 (301)
|+|+||++|||||+|+|+||||+||||||++|+|||+|||+|++|++|++++++|+++|.
T Consensus 287 --G~r~~v~~larAAvA~GaDGlfiE~Hp~P~~AlsDg~q~l~l~~l~~ll~~l~~i~~~vg 346 (350)
T 1vr6_A 287 --GRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKLADALG 346 (350)
T ss_dssp --CSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf --775169999999998299889997088801078884024799999999999999999966
No 3
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, dahps, DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=100.00 E-value=0 Score=619.26 Aligned_cols=247 Identities=32% Similarity=0.532 Sum_probs=236.4
Q ss_pred CCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 77068357877279769970699954863499999999999999965533997066015576886663222456712488
Q gi|254780669|r 25 NAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGR 104 (301)
Q Consensus 25 ~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL 104 (301)
++.+++| +++||+ +|++|||||++||+|+++++|+.++++|.++.|+++||| |||++||||+| ++||
T Consensus 10 ~~~v~ig----~i~iG~--~~~lIAGPC~iEs~e~~~~iA~~lk~~~~~~~~~~~fK~------Rts~~s~~g~g-~~gl 76 (262)
T 1zco_A 10 KTVVKIN----DVKFGE--GFTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKP------RTSPYSFQGYG-EKAL 76 (262)
T ss_dssp CCCEEET----TEEETS--SCEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCC------CSSTTSCCCCT-HHHH
T ss_pred CCEEEEC----CEEECC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCC------CCCCCCCCCCH-HHHH
T ss_conf 9889979----999889--857998677116999999999999996242043653357------68843256761-5889
Q ss_pred HHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 89998866528768852288999987650215788225762899999998505977998367778999999999999725
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
+||+++|++||+||+||||+++|++.+++++||||||||||||||||+|+|+|+||||||||||+||+||++++||+.+.
T Consensus 77 ~~l~~ik~~~glpv~TdVh~~~q~e~~~~vvDilQIpAfl~rqtdLl~aaa~t~kpV~lKkgq~~s~~~~~~a~eki~~~ 156 (262)
T 1zco_A 77 RWMREAADEYGLVTVTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQ 156 (262)
T ss_dssp HHHHHHHHHHTCEEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCEEEEECCCHHHHHHHHHHCEEEEECCHHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 99998776549727985284777788740030589572541106999988724982897367777778999999999857
Q ss_pred CCCCEEEEECC--CCCCCHHHCCCCCCCHHHHHH-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 87808995146--544401000000010688851-871687117774212234532126388999999999971898899
Q gi|254780669|r 185 GAKDVLFCERG--TSFGYNTLVTDMRSIPIMTSM-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIF 261 (301)
Q Consensus 185 Gn~~i~lcERG--~~fgy~~lvvD~~~i~~lk~~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlf 261 (301)
||++||+|||| ++|+|+++++|++++++||+. ++|||+|||||. |+|+|++++||||+++|+||||
T Consensus 157 Gn~~i~l~eRG~~t~~~~~~~~~D~~~i~~~k~~~~~pvi~D~shs~-----------G~r~~v~~la~aa~a~G~dGlf 225 (262)
T 1zco_A 157 GNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPA-----------GRRSLVIPLAKAAYAIGADGIM 225 (262)
T ss_dssp TCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTT-----------CSGGGHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCC-----------CCHHHHHHHHHHHHHHCCCEEE
T ss_conf 99789999726445344432454125549998602897211798766-----------6676799999999982999899
Q ss_pred EEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9836983347978201868899999999999999
Q gi|254780669|r 262 LETHQDPDNAPSDGPNMINIKDLPKLLSQLLAID 295 (301)
Q Consensus 262 iE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~ 295 (301)
+||||||++|+|||+|||+|++|++|++++++|+
T Consensus 226 iE~Hp~P~~A~sD~~~~l~l~~l~~ll~~i~~i~ 259 (262)
T 1zco_A 226 VEVHPEPEKALSDSQQQLTFDDFLQLLKELEALG 259 (262)
T ss_dssp EEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9818780217887413679999999999999986
No 4
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes}
Probab=100.00 E-value=0 Score=590.95 Aligned_cols=268 Identities=26% Similarity=0.459 Sum_probs=246.9
Q ss_pred CCCCHHHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 75203445430468761783177068357877279769970699954863499999999999999965533997066015
Q gi|254780669|r 4 LYPQNLEEKQRRIDKNHMIHTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSS 83 (301)
Q Consensus 4 ~~pykl~~~~~~i~~~~~~~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~s 83 (301)
...|.+.+|+.+ ..++.+.+| ++.||++++ ++|||||++||+|+++++|+.++++|.++.|+++|||
T Consensus 114 ~~~~l~~~r~~~-------~~~t~i~i~----~~~~G~~~~-~~IaGPCsiEs~e~~~~~A~~lk~~~~~~~r~~~fk~- 180 (385)
T 3nvt_A 114 HSKALLVSRKNK-------KEDTIVTVK----GLPIGNGEP-VFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKP- 180 (385)
T ss_dssp CTTSCTTBTTTC-------CSCCCEEET----TEEETSSSC-EEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCC-
T ss_pred CCCCCCCCCCCC-------CCCCEEEEC----CEEECCCCE-EEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCEECC-
T ss_conf 545346677667-------899889989----999879987-8998788238999999999999866971897441468-
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEE
Q ss_conf 57688666322245671248889998866528768852288999987650215788225762899999998505977998
Q gi|254780669|r 84 FDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINV 163 (301)
Q Consensus 84 fdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~i 163 (301)
|||++||||+|+ +||+||++++++||+|++||||+++|++.++++||++|||||+||||+||+++|+++|||++
T Consensus 181 -----RTs~~sf~G~G~-egL~il~~i~~~~Glpv~Tev~d~~~~~~v~e~vDilqI~A~~~~n~~Ll~~~a~t~kpV~l 254 (385)
T 3nvt_A 181 -----RTSPYDFQGLGL-EGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILL 254 (385)
T ss_dssp -----CSSTTSCCCCTH-HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEE
T ss_pred -----CCCCCCCCCCCH-HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCEEEECCHHCCCHHHHHHHHCCCCCEEE
T ss_conf -----999867578658-99999999998649974663110131799986375466360002479999998705983894
Q ss_pred ECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCC
Q ss_conf 3677789999999999997258780899514654--440100000001068885-1871687117774212234532126
Q gi|254780669|r 164 KKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTS--FGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGG 240 (301)
Q Consensus 164 Kkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~--fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG 240 (301)
|||||+++++|++|+|++.+.||.++++||||++ |+|.++.+|+++++.||+ +++|||+|||||+ |
T Consensus 255 KkG~~~s~~~~~~a~e~i~~~GN~~i~l~eRG~~~~~~~~~~~ld~~~i~~lk~~~~~PVi~D~SHs~-----------G 323 (385)
T 3nvt_A 255 KRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHST-----------G 323 (385)
T ss_dssp ECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHH-----------C
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCC-----------C
T ss_conf 58887999999999999995599963387577678999876675466699997378999899698768-----------8
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3889999999999718988999836983347978201868899999999999999988519
Q gi|254780669|r 241 ERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIKPL 301 (301)
Q Consensus 241 ~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~vk~l 301 (301)
+|+|++++|+||+++|+||||+|+||||++|+||++|||+|++|++|++++++++.+.+++
T Consensus 324 ~~~~v~~la~AAva~G~dGl~iE~H~dP~~A~sD~~~~l~~~el~~ll~~i~~~~~v~~~~ 384 (385)
T 3nvt_A 324 RKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILASNLVPHKI 384 (385)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHHHHHTCCC---
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8315999999999958998999806880006897111389999999999999999886346
No 5
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=100.00 E-value=0 Score=542.10 Aligned_cols=279 Identities=62% Similarity=1.074 Sum_probs=271.2
Q ss_pred CEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 61783177068357877279769970699954863499999999999999965533997066015576886663222456
Q gi|254780669|r 19 NHMIHTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGV 98 (301)
Q Consensus 19 ~~~~~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~ 98 (301)
......++.++|| ++.||+++|++||||||++||+|+++++|+.+++.++++.|+++|||+|++++|+++++|+|.
T Consensus 20 ~~~~~~~~~i~ig----~~~iG~~~pl~IIAGpcs~e~~e~~le~A~~lk~~g~~~~r~~~~Kp~t~~~~~~~~~~~~~~ 95 (298)
T 3fs2_A 20 GSMVTANSTVKVG----NVTFSNSAPLALIAGPCQMETRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGI 95 (298)
T ss_dssp ----CCCSSEEET----TEEECTTSCCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------C
T ss_pred CCCCCCCCEEEEC----CEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 7644589869989----999889980699970685579999999999999988884858299178777666778775768
Q ss_pred CCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 71248889998866528768852288999987650215788225762899999998505977998367778999999999
Q gi|254780669|r 99 GLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNIL 178 (301)
Q Consensus 99 Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~ 178 (301)
|++++|+||+++++++|+|+.||++++.+++.++++||++|||||+|+|++||+++|+++|||++||||++|+++|++|+
T Consensus 96 g~~~~l~~l~~~~~e~gl~~~Te~~d~~~~~~~~~~vd~~kIga~~~~n~~Ll~~~a~t~kPV~lk~G~~~s~~e~~~Av 175 (298)
T 3fs2_A 96 GLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPVVDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVL 175 (298)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTTCSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH
T ss_conf 88999999999999849943343366888987502355145333114687999999871995662267889989998788
Q ss_pred HHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 99972587808995146544401000000010688851871687117774212234532126388999999999971898
Q gi|254780669|r 179 QKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIA 258 (301)
Q Consensus 179 eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~d 258 (301)
||+.+.||+|+++||||++|+|++.++|++.++.|++...|+++|++|++|.+...++.++|+|+||+++++||+++|+|
T Consensus 176 e~i~~~Gn~~v~l~~rg~~~~~~~~~~n~~~i~~~~~~~~~~~~~~~h~~~~~~~~~~~~~g~~~~v~~~a~aAva~Ga~ 255 (298)
T 3fs2_A 176 AKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVA 255 (298)
T ss_dssp HHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCS
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99984798649982885234899874661578999985897312466544898689841165898999999999980999
Q ss_pred EEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8999836983347978201868899999999999999988519
Q gi|254780669|r 259 GIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIKPL 301 (301)
Q Consensus 259 GlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~vk~l 301 (301)
|||||+||+|++|+||++|||+|++|++|++++++|++++|++
T Consensus 256 Gl~IE~H~~Pd~alsD~~q~l~p~el~~ll~~ir~i~~~~k~~ 298 (298)
T 3fs2_A 256 GFFIETHEDPDNAPSDGPNMVPIDKMPALLEKLMAFDRIAKAL 298 (298)
T ss_dssp EEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8999927980105788655679999999999999999998629
No 6
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=100.00 E-value=0 Score=464.79 Aligned_cols=262 Identities=25% Similarity=0.408 Sum_probs=239.8
Q ss_pred CCCCHHHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 75203445430468761783177068357877279769970699954863499999999999999965533997066015
Q gi|254780669|r 4 LYPQNLEEKQRRIDKNHMIHTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSS 83 (301)
Q Consensus 4 ~~pykl~~~~~~i~~~~~~~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~s 83 (301)
-++||+..|..+ ..++.++| ++++||+++| ++|||||++||+++++++|+.++++|.++.+.++||+
T Consensus 10 ~~~~k~~~~~~~-------~~~~~I~i----~g~~iG~~~p-~iIAGpc~iEs~e~~~~~a~~~k~~~~~~~~~~~~k~- 76 (276)
T 1vs1_A 10 FKGVKLALKSEE-------RRETVVEV----EGVRIGGGSK-AVIAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKP- 76 (276)
T ss_dssp CSSCSTTBCCSS-------CSCCCEEE----TTEEEBTTBC-EEEEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCC-
T ss_pred CCCCEEEECCCC-------CCCCEEEE----CCEEECCCCE-EEEEECCHHCCHHHHHHHHHHHHHHCHHHCCCCCCCC-
T ss_conf 777064104578-------88988997----9999889975-8998676224999999999999984501132554457-
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEE
Q ss_conf 57688666322245671248889998866528768852288999987650215788225762899999998505977998
Q gi|254780669|r 84 FDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINV 163 (301)
Q Consensus 84 fdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~i 163 (301)
|||++||||+|+ ++|++|.++++++|+|++||||+++|++.++++||++|||||+|+||+||+++|+|+|||+|
T Consensus 77 -----r~s~~s~~g~~~-~~l~~l~~~~~~~~~~i~Tdvhe~~~~~~~~~~vdi~kI~S~~~~n~~LL~~ia~t~Kpvil 150 (276)
T 1vs1_A 77 -----RTSPYSFQGLGL-EGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLL 150 (276)
T ss_dssp -----CSSTTSCCCCTH-HHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHHHTCCEEE
T ss_pred -----CCCCCCCCCCHH-HHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEE
T ss_conf -----768544457218-88999985578759833575176366553151100898535100189999999973971996
Q ss_pred ECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH--HHCCCCCCCHHHHHH-CCCEEECHHHHHHHCCCCCCCCCC
Q ss_conf 36777899999999999972587808995146544401--000000010688851-871687117774212234532126
Q gi|254780669|r 164 KKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYN--TLVTDMRSIPIMTSM-GVPVIFDASHSVQQPGIHGNCSGG 240 (301)
Q Consensus 164 Kkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~--~lvvD~~~i~~lk~~-~~PVi~D~SHs~q~p~~~~~~~gG 240 (301)
|+|||.++++|..+++++...||+++++||||++++|. ....|.+.++.|++. ..|++.|++|+. |
T Consensus 151 stG~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g 219 (276)
T 1vs1_A 151 KRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPA-----------G 219 (276)
T ss_dssp ECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHH-----------C
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC-----------C
T ss_conf 67776748899999999985597167775313446777652210222389998767998757777678-----------8
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 38899999999997189889998369833479782018688999999999999999
Q gi|254780669|r 241 ERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDK 296 (301)
Q Consensus 241 ~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~ 296 (301)
++++++++|+||+++|+||+|||+||+|++|+||++++++|++|++|+++++ +++
T Consensus 220 ~~~~i~~la~AAva~GA~g~~IEkH~t~dkalsD~~~sl~p~el~~lv~~ir-~~k 274 (276)
T 1vs1_A 220 RRSLVPALAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELR-WHR 274 (276)
T ss_dssp SGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHHH-HTT
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHH-HHH
T ss_conf 6243699999999939997999959896558997032089999999999976-874
No 7
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=100.00 E-value=0 Score=351.92 Aligned_cols=274 Identities=44% Similarity=0.779 Sum_probs=256.8
Q ss_pred CCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 17706835787727976997069995486349999999999999996553399706601557688666322245671248
Q gi|254780669|r 24 TNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKG 103 (301)
Q Consensus 24 ~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~g 103 (301)
.++.++| +++.||+++|++||||||..+|.|+++++|+.+++.|++..+..+|||.+.+.+|++.++++..+.++.
T Consensus 2 ~~~~i~I----g~~~ig~~~p~~IIAG~nh~gs~~~a~~la~~a~~~gada~k~q~~k~~~~~~~~~~~~~~~~~~~~e~ 77 (292)
T 1o60_A 2 QNKIVKI----GNIDVANDKPFVLFGGMNVLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEG 77 (292)
T ss_dssp CCCCEEE----TTEEECTTSCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHH
T ss_pred CCCEEEE----CCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHH
T ss_conf 9868997----999989999159996488657999999999999998876272619808866444555200025676999
Q ss_pred HHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 88999886652876885228899998765021578822576289999999850597799836777899999999999972
Q gi|254780669|r 104 REIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHA 183 (301)
Q Consensus 104 L~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~ 183 (301)
++++.+.++++++++.|+++++.+.+.+.+++|++|||++.++|++||++++++++|+++++|++.++++|..+++++.+
T Consensus 78 l~~~~~~~~~~~i~~~t~~~~~~~~~~l~~~v~~~kI~S~~~~n~~ll~~~a~~~kpvilstG~~~~~e~~~~~~~~i~~ 157 (292)
T 1o60_A 78 LKIFQELKDTFGVKIITDVHEIYQCQPVADVVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEKIEE 157 (292)
T ss_dssp HHHHHHHHHHHCCEEEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 99999988723974102312187999987247220341111216899999997099569824665789999999999985
Q ss_pred CCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHH--CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 587808995146544401000000010688851--871687117774212234532126388999999999971898899
Q gi|254780669|r 184 HGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSM--GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIF 261 (301)
Q Consensus 184 ~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~--~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlf 261 (301)
.||.++++|+|++.+++.+..++++.+..++.. ..|.+.|.+|..+.........++.+++.+++++||+++|++|+|
T Consensus 158 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aAva~Ga~g~i 237 (292)
T 1o60_A 158 CGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLF 237 (292)
T ss_dssp TTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEE
T ss_pred CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
T ss_conf 39962036664244688753014088889998632344311234542123333333345432214789999980999799
Q ss_pred EEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9836983347978201868899999999999999988519
Q gi|254780669|r 262 LETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIKPL 301 (301)
Q Consensus 262 iE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~vk~l 301 (301)
||.|++|++++||++++|+|++|+.|+++++.|++++|+.
T Consensus 238 IEkH~tldk~~~D~~~Sl~p~el~~lv~~ir~i~~~ik~~ 277 (292)
T 1o60_A 238 LEAHPNPNQAKCDGPSALPLSALEGFVSQMKAIDDLVKSF 277 (292)
T ss_dssp EEEESSGGGCSSCCTTCEEGGGHHHHHHHHHHHHHHHHHS
T ss_pred EEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9968880006886001469999999999999999998656
No 8
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate synthetase; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 kdops; 1.75A {Neisseria meningitidis serogroup B} PDB: 3fyo_A* 3fyp_A* 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=100.00 E-value=0 Score=342.17 Aligned_cols=266 Identities=44% Similarity=0.765 Sum_probs=254.9
Q ss_pred CCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 72797699706999548634999999999999999655339970660155768866632224567124888999886652
Q gi|254780669|r 35 NQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY 114 (301)
Q Consensus 35 ~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~ 114 (301)
|++.||+++|++||||||+.||.|+.+++|+.+.+..++.+.+.+...+|.+.++++..++++.+..++|+++.+.++++
T Consensus 6 ~~~~Ig~~~p~~iIAg~~~n~n~d~~le~AkkLi~~Ak~aGadaVKfQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 85 (280)
T 2qkf_A 6 NDITLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEF 85 (280)
T ss_dssp TTEEESTTSCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99998899926999838824598999999999999999839898998424079756854222222256899999998750
Q ss_pred CCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 87688522889999876502157882257628999999985059779983677789999999999997258780899514
Q gi|254780669|r 115 GFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCER 194 (301)
Q Consensus 115 glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcER 194 (301)
++++.|++++..+.+...+++|++|||+|.++|++|+++++++++||++++|+..+.++|.++++++.+.||.++++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~n~~ll~~~~~~~~pv~l~tg~~~~~~~~~~~~~~i~s~Gn~~~~l~~~ 165 (280)
T 2qkf_A 86 GIPVITDVHEPHQCQPVAEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCER 165 (280)
T ss_dssp CCCEEEECCSGGGHHHHHHHCSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 87523210207889999999888654455402338999988516743532777567999998999998669986388863
Q ss_pred CCCCCCHHHCCCCCCCHHHHHH--CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCC
Q ss_conf 6544401000000010688851--87168711777421223453212638899999999997189889998369833479
Q gi|254780669|r 195 GTSFGYNTLVTDMRSIPIMTSM--GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAP 272 (301)
Q Consensus 195 G~~fgy~~lvvD~~~i~~lk~~--~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~Al 272 (301)
|+++++.....+++.+..++.. ..|++.|++|..+.+........|+++..+.++.||+|+|++|++||.|++|++++
T Consensus 166 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~aAvalGA~g~iIEkHft~dk~~ 245 (280)
T 2qkf_A 166 GSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAK 245 (280)
T ss_dssp CEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC--------
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHCC
T ss_conf 23356653211066799999861489861201010026665564224410345412599997489989999788801058
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 7820186889999999999999998851
Q gi|254780669|r 273 SDGPNMINIKDLPKLLSQLLAIDKIIKP 300 (301)
Q Consensus 273 sD~~q~l~l~~l~~ll~~l~~i~~~vk~ 300 (301)
||++++|+|++|++|++.+++|++++|+
T Consensus 246 ~D~~~Sl~p~el~~lv~~ir~i~~~ik~ 273 (280)
T 2qkf_A 246 CDGPSALPLHLLEDFLIRIKALDDLIKS 273 (280)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 9722257999999999999999999758
No 9
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=99.84 E-value=1.7e-18 Score=141.10 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=180.1
Q ss_pred CEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCCCCCCCCCCC--------------C
Q ss_conf 2797699706999548634999999999999999655339--97066015576886663222456--------------7
Q gi|254780669|r 36 QVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLN--IGLVYKSSFDKANRSSLAGKRGV--------------G 99 (301)
Q Consensus 36 ~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~--~~~ifK~sfdKanRtS~~sfrG~--------------G 99 (301)
+|--|.|++|++|.|||||...+.+++.|+.|+++..++. .-.+.+..|.|. ||+. +|.|+ |
T Consensus 45 ~Il~g~D~RllvIvGPCSIhD~~aa~eYA~rL~~l~~~~~d~l~iVMRvYfEKP-RTtv-GWKGli~DP~ldgs~~I~~G 122 (350)
T 1n8f_A 45 KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKP-RTTV-GWKGLINDPHMDNSFQINDG 122 (350)
T ss_dssp HHHTTSCCCEEEEEECSSCCCHHHHHHHHHHHHHHHHHTTTTEEEEEECCCCCC-CSSS-SCCCTTTCTTSSSCCCHHHH
T ss_pred HHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC-CCCC-CCCCCCCCCCCCCCCCHHHH
T ss_conf 996599987699975887789899999999999999986176289761102688-7778-97613678887888777688
Q ss_pred CHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 12488899988665287688522889999876502157882257628999999985059779983677789999999999
Q gi|254780669|r 100 LKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQ 179 (301)
Q Consensus 100 le~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~e 179 (301)
+..+.++|.++ .+.|+|+.||..++.....+++.+-+--||||..-..-=-+-++...-||-+|+|..-++.-.+.|+.
T Consensus 123 l~~aR~LL~~i-~~~GlP~atE~Ldp~~pqY~~DLiswgAIGARTtESQ~HRelASgls~PVGFKN~TdG~i~vAidAi~ 201 (350)
T 1n8f_A 123 LRIARKLLLDI-NDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAIN 201 (350)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEECCCSSTHHHHGGGCSEEEECTTTTTCHHHHHHHHTCSSCEEEECCTTCCSHHHHHHHH
T ss_pred HHHHHHHHHHH-HHCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHH
T ss_conf 99999999999-86499966101145770557776665543246542478899863898850232478876589999999
Q ss_pred H------------------HHHCCCCCEEEEECCCCC-CCHHHCCCC-CCCHHHHHHCCC--EEECHHHHHHHCCCCCCC
Q ss_conf 9------------------972587808995146544-401000000-010688851871--687117774212234532
Q gi|254780669|r 180 K------------------LHAHGAKDVLFCERGTSF-GYNTLVTDM-RSIPIMTSMGVP--VIFDASHSVQQPGIHGNC 237 (301)
Q Consensus 180 k------------------i~~~Gn~~i~lcERG~~f-gy~~lvvD~-~~i~~lk~~~~P--Vi~D~SHs~q~p~~~~~~ 237 (301)
- +...||++--+.-||-.. -|..- +. .....|++.++| |++||||+ ++++
T Consensus 202 aa~~~H~Fl~i~~~G~~aiv~T~GN~~~HvILRGg~~pNy~~~--~v~~~~~~l~~~~l~~~imIDcSHg------NS~K 273 (350)
T 1n8f_A 202 AAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAK--HVAEVKEGLNKAGLPAQVMIDFSHA------NSSK 273 (350)
T ss_dssp HHTSCCEEEEECTTSBEEEEEECCCSCEEEEECCSSSCCCSHH--HHHHHHHHHHHTTCCCCEEEECSGG------GTTT
T ss_pred HHHCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCHH--HHHHHHHHHHHCCCCHHHHHHCCCC------CCCH
T ss_conf 9747987887478885789982699872589865888998999--9999999998869977885401377------7304
Q ss_pred C-CCCHHHHHHHHHHHHHHC---CCEEEEEECCCHHHCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 1-263889999999999718---9889998369833479782-----------018688999999999999999885
Q gi|254780669|r 238 S-GGERQYIVPLAKAAVAIG---IAGIFLETHQDPDNAPSDG-----------PNMINIKDLPKLLSQLLAIDKIIK 299 (301)
Q Consensus 238 ~-gG~r~~v~~la~aa~a~G---~dGlfiE~Hp~P~~AlsD~-----------~q~l~l~~l~~ll~~l~~i~~~vk 299 (301)
. --+...+..++. -++.| +-|+|+|.|-++-+..-+. .-.|..++=+.+|.++ ++.+|
T Consensus 274 d~~~Q~~V~~~v~~-Qi~~G~~~I~GvMiES~L~eG~Q~i~~~~~L~YG~SITDaCi~We~Te~lL~~l---a~av~ 346 (350)
T 1n8f_A 274 QFKKQMDVCADVCQ-QIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQL---ANAVK 346 (350)
T ss_dssp CGGGHHHHHHHHHH-HHHTTCCSEEEEEEEBCSSSBBCCSSSCSCCCTTCBSSSCBBCHHHHHHHHHHH---HHHHH
T ss_pred HHHHHHHHHHHHHH-HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHHH
T ss_conf 48888999999999-997488628999997136446889999998869872271788968999999999---99998
No 10
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=99.83 E-value=3.7e-18 Score=138.88 Aligned_cols=244 Identities=20% Similarity=0.297 Sum_probs=178.2
Q ss_pred CEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCCCCCCCCCCC--------------C
Q ss_conf 2797699706999548634999999999999999655339--97066015576886663222456--------------7
Q gi|254780669|r 36 QVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLN--IGLVYKSSFDKANRSSLAGKRGV--------------G 99 (301)
Q Consensus 36 ~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~--~~~ifK~sfdKanRtS~~sfrG~--------------G 99 (301)
+|--|.|.+|++|.|||||...+.+++.|+.|+++..++. .-.+....|.|+ ||+ -+|.|+ |
T Consensus 60 ~Il~g~D~RllvIvGPCSIHD~~aa~eYA~rL~~l~~~~~d~l~IVMRvYfEKP-RTt-vGWKGli~DP~ldgs~~I~~G 137 (370)
T 1of8_A 60 DIITGKDDRVLVIVGPCSIHDLEAAQEYALRLKKLSDELKGDLSIIMRAYLEKP-RTT-VGWKGLINDPDVNNTFNINKG 137 (370)
T ss_dssp HHHTTSCCSEEEEEECSCCCCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCC-CSS-SSCCCTTTCTTSSSCCCHHHH
T ss_pred HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCC-CCC-CCCCCCCCCCCCCCCCCHHHH
T ss_conf 996599986279962787899899999999999999983487799998641477-545-686643558899999698899
Q ss_pred CHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 12488899988665287688522889999876502157882257628999999985059779983677789999999999
Q gi|254780669|r 100 LKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQ 179 (301)
Q Consensus 100 le~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~e 179 (301)
+..+.++|.++ .+.|+|+.||..++.....+++.+-+--||||..-..-=-+-++...-||-+|+|..-++.-.++|+.
T Consensus 138 l~~aR~ll~~i-~~~GlP~atE~Ldp~~pqY~~DLiSwgAIGARTtESQ~HRelASgls~PVGFKN~TdG~i~vAidAi~ 216 (370)
T 1of8_A 138 LQSARQLFVNL-TNIGLPIGSEMLDTISPQYLADLVSFGAIGARTTESQLHRELASGLSFPVGFKNGTDGTLNVAVDACQ 216 (370)
T ss_dssp HHHHHHHHHHH-HTTTCCEEEECCSSSTHHHHGGGCSEEEECTTTTTCHHHHHHHHTCSSCEEEECCTTSCSHHHHHHHH
T ss_pred HHHHHHHHHHH-HHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHH
T ss_conf 99999999998-86499700111556467889987623201356200478999863899872341688765889999999
Q ss_pred H------------------HHHCCCCCEEEEECCCCCCCHHHCCCCCCCHH----HHHHCCCEEECHHHHHHHCCCCCCC
Q ss_conf 9------------------97258780899514654440100000001068----8851871687117774212234532
Q gi|254780669|r 180 K------------------LHAHGAKDVLFCERGTSFGYNTLVTDMRSIPI----MTSMGVPVIFDASHSVQQPGIHGNC 237 (301)
Q Consensus 180 k------------------i~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~----lk~~~~PVi~D~SHs~q~p~~~~~~ 237 (301)
- +...||.+--+.-||-.-|.|. |..++.. |++.+-.|++||||+- +++
T Consensus 217 aa~~~H~Fl~i~~~G~~aiv~T~GN~~~HiILRGG~~gpNY---~~~~i~~a~~~L~~~~~~ImIDcSHgN------S~K 287 (370)
T 1of8_A 217 AAAHSHHFMGVTKHGVAAITTTKGNEHCFVILRGGKKGTNY---DAKSVAEAKAQLPAGSNGLMIDYSHGN------SNK 287 (370)
T ss_dssp HHTSCCEEEEECTTSBEEEEEECCCSCEEEEECCCTTCCCC---SHHHHHHHHHHCCTTCCCEEEESSGGG------GTS
T ss_pred HHHCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCC---CHHHHHHHHHHHHCCCCCEEEECCCCC------CHH
T ss_conf 97169766640788756899778987621002756887776---899999999986506982899778886------114
Q ss_pred C-CCCHHHHHHHHH--HHHHHCCCEEEEEECCCHHHCCC--C-----------CCCCCCHHHHHHHHHHH
Q ss_conf 1-263889999999--99971898899983698334797--8-----------20186889999999999
Q gi|254780669|r 238 S-GGERQYIVPLAK--AAVAIGIAGIFLETHQDPDNAPS--D-----------GPNMINIKDLPKLLSQL 291 (301)
Q Consensus 238 ~-gG~r~~v~~la~--aa~a~G~dGlfiE~Hp~P~~Als--D-----------~~q~l~l~~l~~ll~~l 291 (301)
- --+...+..++. ++-.-.+-|+|+|.|-.+-+..- + -+-.|..++=+.+|.++
T Consensus 288 d~~~Q~~V~~~V~~Qi~~G~~~I~GvMiES~L~eG~Q~i~~~~~~~L~YG~SITDaCi~We~Te~lL~~l 357 (370)
T 1of8_A 288 DFRNQPKVNDVVCEQIANGENAITGVMIESNINEGNQGIPAEGKAGLKYGVSITDACIGWETTEDVLRKL 357 (370)
T ss_dssp CGGGHHHHHHHHHHHHHTTCCSEEEEEEEBCSSSBBCCC-------CCTTCBSSSCBBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 4888899999999998757872899999625655688999887777868762061788958999999999
No 11
>1vli_A Spore coat polysaccharide biosynthesis protein SPSE; 2636322, structural genomics, JCSG, protein structure initiative, BSU37870, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=99.53 E-value=8.8e-11 Score=90.37 Aligned_cols=252 Identities=15% Similarity=0.193 Sum_probs=181.6
Q ss_pred ECCCEEEECCCCCCEEECCCCCEEEEE--CCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEEC---------CCCCCC--
Q ss_conf 317706835787727976997069995--48634999999999999999655339-9706601---------557688--
Q gi|254780669|r 23 HTNAAIHLGSGKNQVTFSNEQRFVLIA--GPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKS---------SFDKAN-- 88 (301)
Q Consensus 23 ~~~~~~~ig~~~~~i~ig~~~~l~iIA--GPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~---------sfdKan-- 88 (301)
+....++| ++..||.+.|.+||| |-+=-=+.+.+.++.+..++.|++.. .. .|++ .+++.+
T Consensus 11 ~~m~~~~i----~~~~ig~~~~~~IIAEIG~NH~Gd~~~ak~lI~~A~~sGaDaVKFQ-~~~~d~l~~~~~~~~~~~~~~ 85 (385)
T 1vli_A 11 HHMAAFQI----ANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQ-MFQADRMYQKDPGLYKTAAGK 85 (385)
T ss_dssp ---CEEEE----TTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEC-CBCGGGGTSCCC---------
T ss_pred CCCCEEEE----CCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE-CCCHHHEECCCHHHCCCCCCC
T ss_conf 23441898----9999489998389998157768809999999999998195999950-506776078764434567888
Q ss_pred -CCCCCCCC--CCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHCCCHHHHHHHHHCCCEEEEE
Q ss_conf -66632224--56712488899988665287688522889999876502-157882257628999999985059779983
Q gi|254780669|r 89 -RSSLAGKR--GVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLCRQTDLLTAAAQTGRVINVK 164 (301)
Q Consensus 89 -RtS~~sfr--G~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rqtdLl~a~a~t~kpV~iK 164 (301)
.+-..-|+ .+.. +-...|.+..++.|+...+.+-+..-++.+.+. +|.+-|+++.+.|.+||++++++++||.+-
T Consensus 86 ~~~~~~~~kk~els~-~~~~~l~~~~k~~~i~~~~s~fd~~s~~~l~~l~~~~~KIaS~di~n~~Ll~~i~~~~kpiiiS 164 (385)
T 1vli_A 86 DVSIFSLVQSMEMPA-EWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFS 164 (385)
T ss_dssp CCCHHHHGGGBSSCG-GGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEE
T ss_pred CCCHHHHHHHHHHHH-HHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 863999998365528-9999999999984987998537278887887609631675265546579999999709977993
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHH-HC-CCEEECHHHHHHHCCCCCCCCCCCH
Q ss_conf 677789999999999997258780899514654440100000001068885-18-7168711777421223453212638
Q gi|254780669|r 165 KGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTS-MG-VPVIFDASHSVQQPGIHGNCSGGER 242 (301)
Q Consensus 165 kgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~-~~-~PVi~D~SHs~q~p~~~~~~~gG~r 242 (301)
-|. .+.+|...+++.+...++.+++|.+==+++....--..++.+..+|+ +. .|| -=..|+. +|.
T Consensus 165 tG~-~~~~eI~~~~~~i~~~~~~~i~llhC~s~YPt~~~~~nL~~i~~lk~~~~~~~i-G~SdHs~----------~~~- 231 (385)
T 1vli_A 165 TAG-AEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSE----------HPT- 231 (385)
T ss_dssp CTT-CCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCS----------SSS-
T ss_pred CCC-CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCE-EECCCCC----------CCH-
T ss_conf 265-443468999999986478767998547889996576418899999983266745-8788886----------741-
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHC--CCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999718988999836983347--9782018688999999999999999885
Q gi|254780669|r 243 QYIVPLAKAAVAIGIAGIFLETHQDPDNA--PSDGPNMINIKDLPKLLSQLLAIDKIIK 299 (301)
Q Consensus 243 ~~v~~la~aa~a~G~dGlfiE~Hp~P~~A--lsD~~q~l~l~~l~~ll~~l~~i~~~vk 299 (301)
..+.+|+++||. +||-|-..+.. -.|...+++|++|..+++.++.+..+..
T Consensus 232 ----~~~~~Ai~~GA~--iIEKH~Tl~k~~~g~D~~~Sl~p~e~~~~v~~ir~~~~~lG 284 (385)
T 1vli_A 232 ----EAPCAAVRLGAK--LIEKHFTIDKNLPGADHSFALNPDELKEMVDGIRKTEAELK 284 (385)
T ss_dssp ----HHHHHHHHTTCS--EEEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHCCCC--EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf ----667998737982--68999970366534555426695899999999999999838
No 12
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transferase; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=99.46 E-value=3.9e-10 Score=86.11 Aligned_cols=246 Identities=13% Similarity=0.131 Sum_probs=169.5
Q ss_pred CCCEEEECCCCCCEEECCCCCEEEEE--CCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEEC------CCCCCCC-CCCC
Q ss_conf 17706835787727976997069995--48634999999999999999655339-9706601------5576886-6632
Q gi|254780669|r 24 TNAAIHLGSGKNQVTFSNEQRFVLIA--GPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKS------SFDKANR-SSLA 93 (301)
Q Consensus 24 ~~~~~~ig~~~~~i~ig~~~~l~iIA--GPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~------sfdKanR-tS~~ 93 (301)
.+..+.| |+..||.+.|.+||| |-+---+.+.+.++.+..++.|++.. .. .|++ ....... ....
T Consensus 3 ~~~~~ki----~~~~ig~~~~~~iIAEIg~NH~Gdl~~a~~LI~~A~~sGadaVKFQ-~~~~~~~~~~~~~~~~~~~~~~ 77 (349)
T 2wqp_A 3 NNNEFKI----GNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQ-THIVEDEMSDEAKQVIPGNADV 77 (349)
T ss_dssp CCCEEEE----TTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEE-ECCHHHHCCGGGGGCCCTTCSS
T ss_pred CCCCEEE----CCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEC-CCCHHHHHCHHHHHHCCCCCCC
T ss_conf 8870778----9989689998289997067757769999999999998399999901-7373776186667520478886
Q ss_pred CC----CC--CCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHCCCHHHHHHHHHCCCEEEEECC
Q ss_conf 22----45--6712488899988665287688522889999876502-15788225762899999998505977998367
Q gi|254780669|r 94 GK----RG--VGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLCRQTDLLTAAAQTGRVINVKKG 166 (301)
Q Consensus 94 sf----rG--~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkg 166 (301)
++ .- +..+ -...|.+..++.|+...+.+-+..-++.+.+. +|.+-|++..+.|.+||++++++++||.+=-|
T Consensus 78 ~~~~~~~~~el~~~-~~~~l~~~~k~~gi~f~~t~fd~~sv~~l~~~~~~~~KIaS~~~~n~~Li~~i~~~~kpiiiStG 156 (349)
T 2wqp_A 78 SIYEIMERCALNEE-DEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTG 156 (349)
T ss_dssp CHHHHHHHHCCCHH-HHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECT
T ss_pred CHHHHHHHHHHHHH-HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCEECCCHHHCCHHHHHHHHHCCCCEEEECC
T ss_conf 03343554433268-99999999862575288503642367887751555212152121408999999973997567435
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHC--CCCCCCHHHHHHC--CCEEECHHHHHHHCCCCCCCCCCCH
Q ss_conf 77899999999999972587808995146544401000--0000106888518--7168711777421223453212638
Q gi|254780669|r 167 QFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLV--TDMRSIPIMTSMG--VPVIFDASHSVQQPGIHGNCSGGER 242 (301)
Q Consensus 167 q~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lv--vD~~~i~~lk~~~--~PVi~D~SHs~q~p~~~~~~~gG~r 242 (301)
. .+.+|...+++.+...++ +++|.+==+. |.+-. ..++.+..||+.. +||=+. .|+. |.
T Consensus 157 ~-~~~~eI~~~v~~~~~~~~-~~~llhC~s~--YPt~~~~~nL~~I~~lk~~~~~~~iG~S-DHt~-----------g~- 219 (349)
T 2wqp_A 157 M-NSIESIKKSVEIIREAGV-PYALLHCTNI--YPTPYEDVRLGGMNDLSEAFPDAIIGLS-DHTL-----------DN- 219 (349)
T ss_dssp T-CCHHHHHHHHHHHHHHTC-CEEEEECCCC--SSCCGGGCCTHHHHHHHHHCTTSEEEEE-CCSS-----------SS-
T ss_pred C-CHHHHHHHHHHHHHHHCC-CCEEEEEECC--CCCHHHHCCHHHHHHHHHHCCCCCEEEC-CCCC-----------CC-
T ss_conf 4-305556678988876324-6313253489--9951554168988999986788755606-8887-----------62-
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCC--HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999971898899983698--3347978201868899999999999999988
Q gi|254780669|r 243 QYIVPLAKAAVAIGIAGIFLETHQD--PDNAPSDGPNMINIKDLPKLLSQLLAIDKII 298 (301)
Q Consensus 243 ~~v~~la~aa~a~G~dGlfiE~Hp~--P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~v 298 (301)
..+.+|++.||. +||-|-. ...--.|...+++|++|+.++..++.+..+.
T Consensus 220 ----~~~~~Ava~GA~--iIEKH~Tl~~~~~g~D~~~Sl~p~e~~~~v~~ir~~~~~l 271 (349)
T 2wqp_A 220 ----YACLGAVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLAR 271 (349)
T ss_dssp ----HHHHHHHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHS
T ss_pred ----HHHHHHHHCCCC--EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----778999976987--5789999537668987511289799999999999999871
No 13
>3g8r_A Probable spore coat polysaccharide biosynthesis protein E; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=99.25 E-value=8.7e-09 Score=77.25 Aligned_cols=231 Identities=14% Similarity=0.185 Sum_probs=153.7
Q ss_pred EEEE--CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC-----------CCCCCCCCC-CCCCCC--CCCHHHHHHHHH
Q ss_conf 9995--486349999999999999996553399706601-----------557688666-322245--671248889998
Q gi|254780669|r 46 VLIA--GPCQIESHDHAFMIAEKLYAICQSLNIGLVYKS-----------SFDKANRSS-LAGKRG--VGLKKGREIFRD 109 (301)
Q Consensus 46 ~iIA--GPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~-----------sfdKanRtS-~~sfrG--~Gle~gL~il~e 109 (301)
+||| |.+---+.+.+.++.+..++.|+......+.|= ++......+ ..-|+- +-. +-+..|.+
T Consensus 7 ~iIAEIg~NH~Gd~~~ak~lI~~a~~~ga~~d~~~avKfQ~~~~d~~~~~~~~~~~~~~~~~~~~~~~ls~-~~~~~l~~ 85 (350)
T 3g8r_A 7 LFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQP-EQMQKLVA 85 (350)
T ss_dssp EEEEECTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCH-HHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHCCHHCCCCCCHHHHHHHHHHHCCH-HHHHHHHH
T ss_conf 99999256653759999999999998679976557368871158993460103777425999999753999-99999999
Q ss_pred HHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 8665287688522889999876502-157882257628999999985059779983677789999999999997258780
Q gi|254780669|r 110 LKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKD 188 (301)
Q Consensus 110 ~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~ 188 (301)
-.++.|+...+.+.+..-++.+.+. +|.+-|++..+.|.+||++++++++||.+--| +++.+|...+++.+...+++-
T Consensus 86 ~~k~~gi~f~~s~fd~~s~~~l~~~~~~~~KIaS~d~~n~~Li~~i~~~~kpiiiStG-~~~~~eI~~a~~~~~~~~~~~ 164 (350)
T 3g8r_A 86 EMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTA-GARREDIDKVVSFMLHRGKDL 164 (350)
T ss_dssp HHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECT-TCCHHHHHHHHHHHHTTTCCE
T ss_pred HHHHHCCCEEECCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEECC-CCCHHHHHHHHHHHHCCCCEE
T ss_conf 9862174425262547776565404863797244153104799998500587612347-778888666666553258769
Q ss_pred EEEEECCCCCCCHHHC--CCCCCCHHHHH-H-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 8995146544401000--00001068885-1-871687117774212234532126388999999999971898899983
Q gi|254780669|r 189 VLFCERGTSFGYNTLV--TDMRSIPIMTS-M-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 189 i~lcERG~~fgy~~lv--vD~~~i~~lk~-~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
++-+ +++ .|.+.. +.++.+..||+ + ++||=+ -.|+. |.- ...+.+|+++||. +||-
T Consensus 165 -~llh-c~s-~YPt~~ed~nL~~I~~Lk~~~~~~~vGy-SDHt~-----------g~~---~~~~~~Av~~GA~--iIEK 224 (350)
T 3g8r_A 165 -TIMH-CVA-EYPTPDDHLHLARIKTLRQQYAGVRIGY-STHED-----------PDL---MEPIMLAVAQGAT--VFEK 224 (350)
T ss_dssp -EEEE-CCC-CSSCCGGGCCTTHHHHHHHHCTTSEEEE-EECCC-----------SSC---CHHHHHHHHTTCC--EEEE
T ss_pred -EEEE-CCC-CCCCCHHHCCCHHHHHHHHHCCCCEEEE-CCCCC-----------CCC---CCCHHHHHHCCCC--CEEE
T ss_conf -9961-477-7899837747123544787536785787-88877-----------754---2126878858974--1206
Q ss_pred CCCHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 6983347-978201868899999999999999988
Q gi|254780669|r 265 HQDPDNA-PSDGPNMINIKDLPKLLSQLLAIDKII 298 (301)
Q Consensus 265 Hp~P~~A-lsD~~q~l~l~~l~~ll~~l~~i~~~v 298 (301)
|-..++. ..|...++.+++|.+++..++.+..+.
T Consensus 225 HfTldk~~~g~d~~S~~~~e~~~~v~~i~~~~~~l 259 (350)
T 3g8r_A 225 HVGLPTDQYGINNYSANPEQVRRWLAAAARALAML 259 (350)
T ss_dssp EBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 78447667897232027278999999999999995
No 14
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, manic, transferase; HET: 680; 1.83A {Bacillus anthracis str} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A*
Probab=95.64 E-value=0.14 Score=29.91 Aligned_cols=203 Identities=14% Similarity=0.181 Sum_probs=128.2
Q ss_pred CHHHHHHHHHHHHHHHHHCC-CCEE-EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH
Q ss_conf 99999999999999655339-9706-601557688666322245671248889998866528768852288999987650
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLN-IGLV-YKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIAD 133 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~-~~~i-fK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~ 133 (301)
+.|.+++-|+.+.+-|++.. +|+. -+| .|.+- |... -++.-+.+++.+++..++++--|-..++-++.+.+
T Consensus 61 ~~~~a~~~a~~mi~~GAdIIDIGaeSTrP---ga~~i---s~ee-E~~Rl~pvi~~l~~~~~i~iSIDT~~~~Va~~al~ 133 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRP---GFAKV---SVEE-EIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIE 133 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC-------CCCC---CHHH-HHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCEECCC---CCEEC---CHHH-HHHHHCHHHHHHHHCCCEEEEEECCCHHHHHHHHH
T ss_conf 99999999999998799599989756799---98206---8588-87762567898852676489884885999999997
Q ss_pred -HCCEE-EECHHHCCCHHHHHHHHHCCCEEEEECCC----CCCH-----HHHHHHHHHHHHCCCC-CEEEEECCCCCCCH
Q ss_conf -21578-82257628999999985059779983677----7899-----9999999999725878-08995146544401
Q gi|254780669|r 134 -SVDIL-QIPALLCRQTDLLTAAAQTGRVINVKKGQ----FLSP-----WEMHNILQKLHAHGAK-DVLFCERGTSFGYN 201 (301)
Q Consensus 134 -~vDil-QIgA~~~rqtdLl~a~a~t~kpV~iKkgq----~~s~-----~e~~~a~eki~~~Gn~-~i~lcERG~~fgy~ 201 (301)
.+||+ -|-+++ ..-.++..+++.+.++.+-.-+ .... .++..-++...+.|.+ +-|+..=|+-||-+
T Consensus 134 ~Ga~iINDVsg~~-~d~~m~~~~~~~~~~~vlmH~~~~~~~~~~~~~v~~~~~~~i~~~~~~GI~~~~IiiDPGiGFgK~ 212 (297)
T 1tx2_A 134 AGAHIINDIWGAK-AEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKT 212 (297)
T ss_dssp HTCCEEEETTTTS-SCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCC
T ss_pred CCCEEEECCCCCC-CCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCC
T ss_conf 5962997474333-572789998633788233257777764433105689999999999986988899877665677745
Q ss_pred ---HHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf ---00000001068885187168711777421223453212638899999999997189889998369833
Q gi|254780669|r 202 ---TLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 202 ---~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~ 269 (301)
|+ .=++++..++++++||.+=+|.--....-.+..+..+..--..++-.|+..|++ ++-||.-++
T Consensus 213 ~~~n~-~ll~~l~~~~~lg~PiLvGvSRKsfi~~~~~~~~~~Rl~~Tla~~~~a~~~Ga~--IiRvHDV~e 280 (297)
T 1tx2_A 213 PEQNL-EAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCE--FVRVHDVKE 280 (297)
T ss_dssp HHHHH-HHHHTGGGGGGGCSCBEEECTTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCS--EEEESCHHH
T ss_pred CCCCH-HHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC--EEEECCHHH
T ss_conf 10247-898777654105776375124888898874899788437999999999987998--999698899
No 15
>1tlt_A Putative oxidoreductase (virulence factor MVIM homolog); structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.61 E-value=0.055 Score=32.54 Aligned_cols=75 Identities=11% Similarity=0.137 Sum_probs=60.9
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99886652876885228899998765021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
.++..++||+++.++. + .+.+-+|++-|...+....+++.++.+.||+|++-||...+.+|.....+.....|.
T Consensus 44 ~~~~~~~~~~~~~~~~---~---~l~~~~D~V~I~tp~~~H~~~~~~al~~gkhv~~EKP~~~~~~e~~~l~~~~~~~~~ 117 (319)
T 1tlt_A 44 ALPICESWRIPYADSL---S---SLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL 117 (319)
T ss_dssp HHHHHHHHTCCBCSSH---H---HHHTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCCH---H---HHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9999998299822889---9---985699999994886666899999986198799963650246677777777650363
Q ss_pred C
Q ss_conf 8
Q gi|254780669|r 187 K 187 (301)
Q Consensus 187 ~ 187 (301)
.
T Consensus 118 ~ 118 (319)
T 1tlt_A 118 T 118 (319)
T ss_dssp C
T ss_pred E
T ss_conf 1
No 16
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.60 E-value=0.028 Score=34.42 Aligned_cols=82 Identities=17% Similarity=0.139 Sum_probs=63.3
Q ss_pred HHHHHHHHHCCE---EEEECCCHHHHHHH-HHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 999886652876---88522889999876-50215788225762899999998505977998367778999999999999
Q gi|254780669|r 106 IFRDLKKKYGFP---ILTDVHTEQQCEAI-ADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKL 181 (301)
Q Consensus 106 il~e~k~~~glp---v~TeV~~~~~~e~~-~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki 181 (301)
-.+++.++||+| +-++..+.-.-|.+ ..-+|++-|-+-+--..+++.++.+.||+|++-|+...+.+|....++..
T Consensus 53 ~a~~~a~~~gi~~~~~y~d~~~~l~~e~~~~~~iD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 132 (398)
T 3dty_A 53 RGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELS 132 (398)
T ss_dssp HHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH
T ss_conf 99999998688954004999999998751799817999899869989999999986993898578401678899999988
Q ss_pred HHCCCC
Q ss_conf 725878
Q gi|254780669|r 182 HAHGAK 187 (301)
Q Consensus 182 ~~~Gn~ 187 (301)
.+.|..
T Consensus 133 ~~~~~~ 138 (398)
T 3dty_A 133 HKHNRI 138 (398)
T ss_dssp HHTTCC
T ss_pred HHCCCE
T ss_conf 633966
No 17
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=95.54 E-value=0.068 Score=31.91 Aligned_cols=111 Identities=14% Similarity=0.213 Sum_probs=65.7
Q ss_pred ECHHHCCCHHHHHHHH-----HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHH
Q ss_conf 2257628999999985-----05977998367778999999999999725878089951465444010000000106888
Q gi|254780669|r 140 IPALLCRQTDLLTAAA-----QTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMT 214 (301)
Q Consensus 140 IgA~~~rqtdLl~a~a-----~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk 214 (301)
-||.++++.+++.++- .++.||-+|=-..-+.+++...+..+.+.|...+.+--|=-.-+|.. ..|...++.+|
T Consensus 103 ~Ga~Ll~~p~~~~~iv~~~~~~~~~pvsvK~RlG~d~~~~~~~~~~l~~~G~~~ltiH~Rt~~q~y~g-~~~w~~I~~~k 181 (318)
T 1vhn_A 103 AGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTG-RAEWKALSVLE 181 (318)
T ss_dssp CGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSS-CCCGGGGGGSC
T ss_pred CCCCHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHCCCCC-CCHHHHHHHHH
T ss_conf 73135325378999975321115884211141276621467999999982864677630002206775-10167899987
Q ss_pred HHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE--ECCCH
Q ss_conf 5187168711777421223453212638899999999997189889998--36983
Q gi|254780669|r 215 SMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE--THQDP 268 (301)
Q Consensus 215 ~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE--~Hp~P 268 (301)
+ .+|||. +|+.. ...++..-+ -..|+||+|+= .--||
T Consensus 182 ~-~iPvi~-----------NGdI~-s~~da~~~l----~~tg~dGVMIGRgal~nP 220 (318)
T 1vhn_A 182 K-RIPTFV-----------SGDIF-TPEDAKRAL----EESGCDGLLVARGAIGRP 220 (318)
T ss_dssp C-SSCEEE-----------ESSCC-SHHHHHHHH----HHHCCSEEEESGGGTTCT
T ss_pred C-CCCCCC-----------CCCCC-CHHHHHHHH----HHHCCCEEEECHHHHHCC
T ss_conf 1-586101-----------58869-999999998----723899799717657197
No 18
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum atcc 13032}
Probab=95.24 E-value=0.087 Score=31.23 Aligned_cols=76 Identities=20% Similarity=0.148 Sum_probs=62.9
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 999886652876885228899998765-0215788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-.++.+++||++..|+. . +.++ +.+|++-|...+....+++.++.+.||+|++-||...+++|..-..+.....
T Consensus 41 ~~~~~~~~~~~~~~~~~---~--ell~~~~iD~V~I~tp~~~h~~~~~~al~~gk~Vl~EKP~a~~~~e~~~l~~~~~~~ 115 (344)
T 3euw_A 41 GAQRLAEANGAEAVASP---D--EVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDG 115 (344)
T ss_dssp HHHHHHHTTTCEEESSH---H--HHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHCCCEECCH---H--HHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 99999998499778999---9--996489988899715431103567998851375110232200134566666655413
Q ss_pred CC
Q ss_conf 87
Q gi|254780669|r 185 GA 186 (301)
Q Consensus 185 Gn 186 (301)
|-
T Consensus 116 ~~ 117 (344)
T 3euw_A 116 AS 117 (344)
T ss_dssp GG
T ss_pred CC
T ss_conf 33
No 19
>3kgf_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathwa aromatic biosynthesis; HET: PHE TRP; 2.00A {Mycobacterium tuberculosis} PDB: 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 2w19_A 2w1a_A*
Probab=95.22 E-value=0.19 Score=28.99 Aligned_cols=144 Identities=16% Similarity=0.171 Sum_probs=86.4
Q ss_pred CCEEEECHHHCCC-HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC-CEEEEECCCCCCCHHHCCC--CCCC
Q ss_conf 1578822576289-9999998505977998367778999999999999725878-0899514654440100000--0010
Q gi|254780669|r 135 VDILQIPALLCRQ-TDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAK-DVLFCERGTSFGYNTLVTD--MRSI 210 (301)
Q Consensus 135 vDilQIgA~~~rq-tdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~-~i~lcERG~~fgy~~lvvD--~~~i 210 (301)
.-++|||-|.-|- -.=++=+....-||-||=|..++++|.+..++++.-.... .+.|+-| ||..+. -+ ..-|
T Consensus 278 aH~lWIGeRTRqlDgAHVef~rgI~NPIGiKvGP~~~p~el~~L~~~LnP~nepGRltLI~R---mGa~ki-~~~LP~Li 353 (464)
T 3kgf_A 278 AHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELAVEYVERLDPHNKPGRLTLVSR---MGNHKV-RDLLPPIV 353 (464)
T ss_dssp CSEEEECTTSCCTTSHHHHHHHHCCSCEEEEECTTCCHHHHHHHHHHHCTTCCTTSEEEEEC---CCTTTH-HHHHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEE---CCCHHH-HHHHHHHH
T ss_conf 54000034445788516799874568611324899999999999998498887871899860---370789-98879999
Q ss_pred HHHHHHCCCEE--ECHHHHHHHCCCCCCCCCCCHHHHHH---H--HHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHH
Q ss_conf 68885187168--71177742122345321263889999---9--9999971898899983698334797820186889
Q gi|254780669|r 211 PIMTSMGVPVI--FDASHSVQQPGIHGNCSGGERQYIVP---L--AKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIK 282 (301)
Q Consensus 211 ~~lk~~~~PVi--~D~SHs~q~p~~~~~~~gG~r~~v~~---l--a~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~ 282 (301)
...++.+.||+ |||-|.--.-.+.|-+|---.+.+.. . ...+...-.-|+-+|.-.+.-.--.+|.+.++-+
T Consensus 354 ~aV~~~G~~VvW~cDPMHGNT~~~~~G~KTR~f~~I~~Ev~~ff~ih~~~gt~~GGvHlE~Tg~~VTEC~GG~~~~~e~ 432 (464)
T 3kgf_A 354 EKVQATGHQVIWQCDPMHGNTHESSTGFKTRHFDRIVDEVQGFFEVHRALGTHPGGIHVEITGENVTECLGGAQDISET 432 (464)
T ss_dssp HHHHTTSCCCEEEECCSTTSEEECTTSCEEEBHHHHHHHHHHHHHHHHHHTCCCCEEEEEBCSSCCCCSBBTTTTBCTT
T ss_pred HHHHHCCCCEEEECCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 9998779955996358777732689985066789999999999999998397667587882389831307996657822
No 20
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.00 E-value=0.07 Score=31.83 Aligned_cols=76 Identities=20% Similarity=0.306 Sum_probs=62.2
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 999886652876885228899998765-0215788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-.+++.++||+++.+++ ++ .+. .-+|++-|-.-+-...+++.++.+.||.|++-|+...+++|....++.....
T Consensus 40 ~~~~~~~~~~~~~~~~~---~e--ll~~~~vD~V~i~tp~~~H~~~~~~al~~gkhV~~EKPla~~~~ea~~l~~~a~~~ 114 (387)
T 3moi_A 40 VRERFGKEYGIPVFATL---AE--MMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERA 114 (387)
T ss_dssp HHHHHHHHHTCCEESSH---HH--HHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEECCH---HH--HHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999998599858999---99--96599998899908967899999999861895653788879999999999999980
Q ss_pred CC
Q ss_conf 87
Q gi|254780669|r 185 GA 186 (301)
Q Consensus 185 Gn 186 (301)
|.
T Consensus 115 g~ 116 (387)
T 3moi_A 115 GV 116 (387)
T ss_dssp TC
T ss_pred CC
T ss_conf 99
No 21
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp}
Probab=94.98 E-value=0.22 Score=28.55 Aligned_cols=162 Identities=15% Similarity=0.111 Sum_probs=94.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE---------ECCC-
Q ss_conf 999999999999999655339970660155768866632224567124888999886652876885---------2288-
Q gi|254780669|r 55 ESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT---------DVHT- 124 (301)
Q Consensus 55 ES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T---------eV~~- 124 (301)
-+.+.+-.+|+.....|.. ++.- .+++.++++|+.+++|++- .+..
T Consensus 33 ~~~e~v~a~A~a~~~gGa~----~i~~--------------------~~~~~l~~ir~~~~~pv~~l~k~~~~~~~~~~~ 88 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAV----AVRI--------------------EGIDNLRMTRSLVSVPIIGIIKRDLDESPVRIT 88 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCS----EEEE--------------------ESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBS
T ss_pred CCCHHHHHHHHHHHHCCCE----EEEC--------------------CCHHHHHHHHHHCCCCEEEEEECCCCCCCEECC
T ss_conf 7808999999999978987----9955--------------------999999999985576177566204678844425
Q ss_pred --HHHHHHHHH-HCCEEEECHHHCCC----HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf --999987650-21578822576289----99999985059779983677789999999999997258780899514654
Q gi|254780669|r 125 --EQQCEAIAD-SVDILQIPALLCRQ----TDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTS 197 (301)
Q Consensus 125 --~~~~e~~~~-~vDilQIgA~~~rq----tdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~ 197 (301)
.++++.+.+ .+|++.+.+-.-.+ .++...+...+..++..-. +++++..+ .+.|.+=|...-||.+
T Consensus 89 ~~~~~~~~~~~~gad~i~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~v~---t~~~a~~a----~~~Gad~Igv~~~~~~ 161 (232)
T 3igs_A 89 PFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS---SVDDGLAC----QRLGADIIGTTMSGYT 161 (232)
T ss_dssp CSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC---SHHHHHHH----HHTTCSEEECTTTTSS
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC---CHHHHHHH----HHCCCCEEEEECCCCC
T ss_conf 5899998888739999999723489978999999999754986999869---99999999----9689988997357787
Q ss_pred CCCHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 4401000000010688851871687117774212234532126388999999999971898899983
Q gi|254780669|r 198 FGYNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 198 fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
..-.+...++.-+...+..+.|||.+- |-+. +.-+..++.+|+||+++=+
T Consensus 162 ~~~~~~~~~~~l~~~~~~~~ipvia~G---------------GI~t--~~d~~~~~~~GAd~V~vGs 211 (232)
T 3igs_A 162 TPDTPEEPDLPLVKALHDAGCRVIAEG---------------RYNS--PALAAEAIRYGAWAVTVGS 211 (232)
T ss_dssp SSSCCSSCCHHHHHHHHHTTCCEEEES---------------CCCS--HHHHHHHHHTTCSEEEECH
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEEC---------------CCCC--HHHHHHHHHCCCCEEEECH
T ss_conf 787670367889999733782399858---------------9899--9999999986999999894
No 22
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=94.76 E-value=0.18 Score=29.09 Aligned_cols=81 Identities=17% Similarity=0.237 Sum_probs=63.4
Q ss_pred HHHHHHHHHCCEE--EEECCCHHHHHHHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9998866528768--852288999987650-2157882257628999999985059779983677789999999999997
Q gi|254780669|r 106 IFRDLKKKYGFPI--LTDVHTEQQCEAIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLH 182 (301)
Q Consensus 106 il~e~k~~~glpv--~TeV~~~~~~e~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~ 182 (301)
-.+++.++||+++ .++ .+ +.+++ -+|++-|..-+-...+++.++.+.|++|++-||...+++|....++...
T Consensus 61 ~a~~~a~~~~~~~~~y~~---~~--ell~~~~iDaV~I~Tp~~~H~~~~~~al~~GkhVl~EKPla~~~~e~~~l~~~~~ 135 (357)
T 3ec7_A 61 RAQAALDKYAIEAKDYND---YH--DLINDKDVEVVIITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQ 135 (357)
T ss_dssp HHHHHHHHHTCCCEEESS---HH--HHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCC---HH--HHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 999999983999831199---99--9965999888998898500004578898517769975881355899999876530
Q ss_pred HCCCCCEEE
Q ss_conf 258780899
Q gi|254780669|r 183 AHGAKDVLF 191 (301)
Q Consensus 183 ~~Gn~~i~l 191 (301)
..|..-+++
T Consensus 136 ~~~~~~~~v 144 (357)
T 3ec7_A 136 KNGKRMVQI 144 (357)
T ss_dssp HHTSCCEEE
T ss_pred CCCCCCCCC
T ss_conf 256643233
No 23
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.44 E-value=0.18 Score=29.06 Aligned_cols=85 Identities=7% Similarity=0.108 Sum_probs=64.5
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCC------CEEEEECCCCCCHHHHHHHH
Q ss_conf 999886652876885228899998765-02157882257628999999985059------77998367778999999999
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTG------RVINVKKGQFLSPWEMHNIL 178 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~------kpV~iKkgq~~s~~e~~~a~ 178 (301)
-.+++.++||+|..+-..+.+++ ++ +-+|++-|..-+-...++..++-+.| |+|++-|+...+.+|....+
T Consensus 81 ~a~~~a~~~g~~~~~~y~d~~el--l~~~~vD~V~I~tp~~~H~~~~~~Al~aG~~~~~~KhV~~EKPla~~~~ea~~l~ 158 (479)
T 2nvw_A 81 SSLQTIEQLQLKHATGFDSLESF--AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELY 158 (479)
T ss_dssp HHHHHHHHTTCTTCEEESCHHHH--HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCHHHH--HCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHH
T ss_conf 99999998588977446999999--5599998899949827899999999982954356873899267531056679999
Q ss_pred HHHHHCCCCCEEEE
Q ss_conf 99972587808995
Q gi|254780669|r 179 QKLHAHGAKDVLFC 192 (301)
Q Consensus 179 eki~~~Gn~~i~lc 192 (301)
+.....++-.++++
T Consensus 159 ~~a~~~~~v~~~v~ 172 (479)
T 2nvw_A 159 SISQQRANLQTIIC 172 (479)
T ss_dssp HHHHTCTTCEEEEE
T ss_pred HHHHHCCCCEEEEE
T ss_conf 99763254203300
No 24
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=94.43 E-value=0.26 Score=28.05 Aligned_cols=80 Identities=15% Similarity=0.108 Sum_probs=63.8
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 999886652876885228899998765-0215788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-.++++++|+++.+.+ +.++ .+. +-+|++-|-+-.-...+++.++.+.|++|++-|+...+.+|....++.....
T Consensus 46 ~~~~~~~~~~~~~~~~--~~~~--ll~~~~vD~v~I~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~e~~~l~~~a~~~ 121 (346)
T 3cea_A 46 QLEWAKNELGVETTYT--NYKD--MIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSH 121 (346)
T ss_dssp HHHHHHHTTCCSEEES--CHHH--HHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCCC--CHHH--HHCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHC
T ss_conf 9999999829985159--9999--96489988899957176589999999864985988557422212211567888752
Q ss_pred CCCCE
Q ss_conf 87808
Q gi|254780669|r 185 GAKDV 189 (301)
Q Consensus 185 Gn~~i 189 (301)
|..-.
T Consensus 122 ~~~~~ 126 (346)
T 3cea_A 122 PNQIF 126 (346)
T ss_dssp TTSCE
T ss_pred CCEEE
T ss_conf 87665
No 25
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.38 E-value=0.31 Score=27.61 Aligned_cols=168 Identities=15% Similarity=0.293 Sum_probs=98.1
Q ss_pred EEEECCC-CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE--EEC
Q ss_conf 9995486-3499999999999999965533997066015576886663222456712488899988665287688--522
Q gi|254780669|r 46 VLIAGPC-QIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPIL--TDV 122 (301)
Q Consensus 46 ~iIAGPC-siES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~--TeV 122 (301)
.||+.|= ++=+.++ |..+.+.| ..+.+- |. ...|+-.+...++++..++++. .-+
T Consensus 47 PIIsA~MDtV~~~~m----A~als~~G---glgvih--------r~-------~~~ee~~~~i~k~~~~~~~~v~~~~~~ 104 (361)
T 3khj_A 47 PLISSAMDTVTEHLM----AVGMARLG---GIGIIH--------KN-------MDMESQVNEVLKVKNSGGLRVGAAIGV 104 (361)
T ss_dssp SEEECSSTTTCSHHH----HHHHHHTT---CEEEEC--------SS-------SCHHHHHHHHHHHHHTTCCCCEEEECT
T ss_pred CEEECCCCCCCCHHH----HHHHHHCC---CEEEEE--------CC-------CCHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf 889789887588899----99999889---977972--------26-------998999999997640267445302583
Q ss_pred CCHHHHHHHHH-HCCEEEECHHHCCCHHHHHHHHH----CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC-
Q ss_conf 88999987650-21578822576289999999850----5977998367778999999999999725878089951465-
Q gi|254780669|r 123 HTEQQCEAIAD-SVDILQIPALLCRQTDLLTAAAQ----TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGT- 196 (301)
Q Consensus 123 ~~~~~~e~~~~-~vDilQIgA~~~rqtdLl~a~a~----t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~- 196 (301)
++.+.++.+.+ .+|++.|-.-+-....+++.+.+ .+.+|.+ |.-.+++ .++++...|.+- +...-|-
T Consensus 105 ~~~~~~~~lv~agvd~ivID~ahg~~~~~~~~ik~~r~~~~~~vi~--GNVaT~e----~a~~L~~aGAD~-VkVGiG~G 177 (361)
T 3khj_A 105 NEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIV--GNVVTEE----ATKELIENGADG-IKVGIGPG 177 (361)
T ss_dssp TCHHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEE--EEECSHH----HHHHHHHTTCSE-EEECSSCC
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE--CCCCCHH----HHHHHHHCCCCE-EEECCCCC
T ss_conf 0899999999779999999289885148999999986027988686--5538889----999999719988-99734068
Q ss_pred ---------CCCCHHHCCCCCCCH----HHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf ---------444010000000106----8885187168711777421223453212638899999999997189889998
Q gi|254780669|r 197 ---------SFGYNTLVTDMRSIP----IMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE 263 (301)
Q Consensus 197 ---------~fgy~~lvvD~~~i~----~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE 263 (301)
-+||.. +.++. ..++++.|||-|--... -++.+ +|+++|+|++|+=
T Consensus 178 s~CtTr~~tGvg~pq----~sai~~~~~~~~~~~vpIIADGGi~~------------~gdi~-----KAla~GAd~VMlG 236 (361)
T 3khj_A 178 SICTTRIVAGVGVPQ----ITAIEKCSSVASKFGIPIIADGGIRY------------SGDIG-----KALAVGASSVMIG 236 (361)
T ss_dssp TTCCHHHHTCBCCCH----HHHHHHHHHHHHHHTCCEEEESCCCS------------HHHHH-----HHHHHTCSEEEES
T ss_pred CCCCCCCCCCCCCCH----HHHHHHHHHHHCCCCCCEEECCCCCC------------CCHHH-----HHHHCCCCHHHHC
T ss_conf 555520031557836----88999999986047887795588364------------67199-----9987388400005
No 26
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=94.13 E-value=0.15 Score=29.61 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=61.9
Q ss_pred HHHHHHHHHHCCEEEEECC-CHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 8999886652876885228-899998765-02157882257628999999985059779983677789999999999997
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVH-TEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLH 182 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~-~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~ 182 (301)
+-.+++.++|++|-.+.+. +.+ |.++ +-+|++-|-.-+-..++++.++.+.||+|++-|+...+++|..-.++-..
T Consensus 42 ~~~~~~a~~~~~~~~~~~~~d~~--ell~~~~iD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 119 (362)
T 1ydw_A 42 EKAKAFATANNYPESTKIHGSYE--SLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACE 119 (362)
T ss_dssp HHHHHHHHHTTCCTTCEEESSHH--HHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEECCCHH--HHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 99999999849985556538999--9964999888999588268899999999769859994781000467899999986
Q ss_pred HCCC
Q ss_conf 2587
Q gi|254780669|r 183 AHGA 186 (301)
Q Consensus 183 ~~Gn 186 (301)
+.|.
T Consensus 120 ~~~~ 123 (362)
T 1ydw_A 120 ANGV 123 (362)
T ss_dssp TTTC
T ss_pred HHCC
T ss_conf 3022
No 27
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=94.08 E-value=0.35 Score=27.21 Aligned_cols=79 Identities=16% Similarity=0.240 Sum_probs=63.3
Q ss_pred HHHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8999886652876885228899998765-021578822576289999999850597799836777899999999999972
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHA 183 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~ 183 (301)
+-.++++++|+.+...+ +.+ +.++ +-+|++-|..-....++++.++.+.+|+|++-||...+++|....++....
T Consensus 38 ~~~~~~a~~~~~~~~~~--~~~--ell~~~~iD~V~I~tp~~~H~~~~~~al~~gkhV~~EKP~a~~~~e~~~l~~~a~~ 113 (344)
T 3ezy_A 38 DRLREMKEKLGVEKAYK--DPH--ELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKK 113 (344)
T ss_dssp HHHHHHHHHHTCSEEES--SHH--HHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCC--CHH--HHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 99999999839984029--999--99649998999971631143999999997699689945721110367777777643
Q ss_pred CCCC
Q ss_conf 5878
Q gi|254780669|r 184 HGAK 187 (301)
Q Consensus 184 ~Gn~ 187 (301)
.|..
T Consensus 114 ~~~~ 117 (344)
T 3ezy_A 114 ADVI 117 (344)
T ss_dssp HTCC
T ss_pred CCCE
T ss_conf 6976
No 28
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.07 E-value=0.19 Score=28.93 Aligned_cols=76 Identities=18% Similarity=0.184 Sum_probs=60.7
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 999886652876885228899998765-0215788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-.+++.++||+|-++ .+.+ +.++ +-+|++-|..-.....+++.++-+.||+|++-|+...+.+|....++.....
T Consensus 58 ~~~~~a~~~gi~~~~--~~~~--ell~~~~iDaV~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~ 133 (383)
T 3oqb_A 58 KVEALAKRFNIARWT--TDLD--AALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSK 133 (383)
T ss_dssp HHHHHHHHTTCCCEE--SCHH--HHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCC--CCHH--HHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 999999984999221--8999--995699997899899869999999999986994780288633299998865466505
Q ss_pred C
Q ss_conf 8
Q gi|254780669|r 185 G 185 (301)
Q Consensus 185 G 185 (301)
|
T Consensus 134 g 134 (383)
T 3oqb_A 134 G 134 (383)
T ss_dssp T
T ss_pred C
T ss_conf 9
No 29
>2dqw_A Dihydropteroate synthase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2dza_A* 2dzb_A*
Probab=93.96 E-value=0.37 Score=27.06 Aligned_cols=236 Identities=17% Similarity=0.232 Sum_probs=134.6
Q ss_pred CCHHHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCC
Q ss_conf 2034454304687617831770683578772797699706999548634999999999999999655339-970660155
Q gi|254780669|r 6 PQNLEEKQRRIDKNHMIHTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKSSF 84 (301)
Q Consensus 6 pykl~~~~~~i~~~~~~~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~sf 84 (301)
++.+-.|...++...+ .+.+++... .|+++..+ -+.+.+++-|+.+.+-|+++. +|+- ++-
T Consensus 16 ~~~~~~r~l~~~~~~i---MGIlNvTPD----SFsdgg~~---------~~~~~al~~a~~mi~~GAdiIDIGge--STr 77 (294)
T 2dqw_A 16 TLWLRDRALDLDRVRL---LGVLNLTPD----SFSDGGRY---------LDPERALERAREMVAEGADILDLGAE--STR 77 (294)
T ss_dssp EEECSSSEEECSSCEE---EEEEECCC--------------------------CCHHHHHHHHHHTCSEEEEECC-----
T ss_pred EEEECCEEECCCCCEE---EEEEECCCC----CCCCCCCC---------CCHHHHHHHHHHHHHCCCCEEEECCC--CCC
T ss_conf 6878996861898769---999808999----99888758---------89999999999999879989997981--279
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH-HCCEEE-ECHHHCCCHHHHHHHHHCCCEEE
Q ss_conf 7688666322245671248889998866528768852288999987650-215788-22576289999999850597799
Q gi|254780669|r 85 DKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIAD-SVDILQ-IPALLCRQTDLLTAAAQTGRVIN 162 (301)
Q Consensus 85 dKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~-~vDilQ-IgA~~~rqtdLl~a~a~t~kpV~ 162 (301)
+.+.+. +-... ++.-+.+++.++ +.++++--|-..++-++.+.+ .+||+- |.++ +.-..+..+++.+.++.
T Consensus 78 Pga~~i---~~~eE-~~Rl~pvi~~~~-~~~~~iSIDT~~~~Va~~al~~Ga~iINDVsg~--~~~~~~~~~~~~~~~~v 150 (294)
T 2dqw_A 78 PGAAPV---PVEEE-KRRLLPVLEAVL-SLGVPVSVDTRKPEVAEEALKLGAHLLNDVTGL--RDERMVALAARHGVAAV 150 (294)
T ss_dssp -----------CCH-HHHHHHHHHHHH-TTCSCEEEECSCHHHHHHHHHHTCSEEECSSCS--CCHHHHHHHHHHTCEEE
T ss_pred CCCCCC---CCHHH-HHHHCCHHHHHC-CCCCEEEEECCCHHHHHHHHHCCCEEEEECCCC--CCCHHHHHHHHCCCCEE
T ss_conf 998667---70888-864041332211-579707686898999999996497299604434--56057899986178569
Q ss_pred EECCCCCC------------H----HH-HHHHHHHHHHCCCCCEEEEECCCCCCCHH--HCCCCCCCHHHHHHCCCEEEC
Q ss_conf 83677789------------9----99-99999999725878089951465444010--000000106888518716871
Q gi|254780669|r 163 VKKGQFLS------------P----WE-MHNILQKLHAHGAKDVLFCERGTSFGYNT--LVTDMRSIPIMTSMGVPVIFD 223 (301)
Q Consensus 163 iKkgq~~s------------~----~e-~~~a~eki~~~Gn~~i~lcERG~~fgy~~--lvvD~~~i~~lk~~~~PVi~D 223 (301)
+-..+... + .+ ....++.+.+.|.+++++ .=|+-||.+. ...=++++..++.+++||.+-
T Consensus 151 im~~~~~~~~~~~~~~~~~d~i~~i~~~~~~~i~~~~~~Gi~~iii-DPGiGFgKt~~~n~~ll~~l~~~~~~g~PiLvG 229 (294)
T 2dqw_A 151 VMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVL-DPGFGFGKLLEHNLALLRRLDEIVALGHPVLVG 229 (294)
T ss_dssp EECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEE-ECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEEC
T ss_pred EEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE-CCCCCCCCCHHHCHHHHHHHHHHCCCCCCEEEE
T ss_conf 9723679825555411356507899999999999999779955532-167787877132699986456641568755884
Q ss_pred HHHHHHHCCCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 1777421223453212638899-999999997189889998369833
Q gi|254780669|r 224 ASHSVQQPGIHGNCSGGERQYI-VPLAKAAVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 224 ~SHs~q~p~~~~~~~gG~r~~v-~~la~aa~a~G~dGlfiE~Hp~P~ 269 (301)
.|.=-..-.-.+...--.|.+. -..+..|+..|++ ++-||.-.+
T Consensus 230 ~SRKsfig~~~~~~~~~~R~~~Tla~~~~a~~~Ga~--iiRVHDV~~ 274 (294)
T 2dqw_A 230 LSRKRTIGELSGVEDPAQRVHGSVAAHLFAVMKGVR--LLRVHDVRA 274 (294)
T ss_dssp CTTCHHHHHHHTCCSGGGCHHHHHHHHHHHHHTTCC--EEEESCHHH
T ss_pred ECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC--EEEECCHHH
T ss_conf 004567777636998788668899999999987998--999598799
No 30
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; reductive methylation, structural genomics, PSI 2, protein structure initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=93.74 E-value=0.29 Score=27.77 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=60.7
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99988665287688522889999876502157882257628999999985059779983677789999999999997258
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHG 185 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~G 185 (301)
-.+++.++|+.+-+++-. +. ...+-+|++-|..-.-..++++.++.+.||+|++-||...+++|....++.....|
T Consensus 38 ~~~~~a~~~~~~~~~~~~--e~--l~~~~iD~V~I~tp~~~H~~~~~~al~~gkhV~~EKP~a~~~~e~~~l~~~a~~~~ 113 (325)
T 2ho3_A 38 TAATFASRYQNIQLFDQL--EV--FFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNN 113 (325)
T ss_dssp HHHHHGGGSSSCEEESCH--HH--HHTSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCCCHH--HH--HHCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 999999984998356859--99--71899989999589603159999998634512227983111102467777887617
Q ss_pred C
Q ss_conf 7
Q gi|254780669|r 186 A 186 (301)
Q Consensus 186 n 186 (301)
.
T Consensus 114 ~ 114 (325)
T 2ho3_A 114 C 114 (325)
T ss_dssp C
T ss_pred C
T ss_conf 6
No 31
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=93.70 E-value=0.2 Score=28.87 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=61.1
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 999886652876885228899998765-0215788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-.+++.++||+|...+ +.+ +.++ +-+|++-|.+-.-...+++.++.+.||+|++-|+...+..|.....+.....
T Consensus 42 ~~~~~a~~~~~~~~~~--~~~--~ll~~~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPl~~~~~e~~~l~~~~~~~ 117 (330)
T 3e9m_A 42 NAQKMAKELAIPVAYG--SYE--ELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQ 117 (330)
T ss_dssp HHHHHHHHTTCCCCBS--SHH--HHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEECC--CHH--HHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999839980419--999--995489999899899707689999999985995764032112256778899999863
Q ss_pred CC
Q ss_conf 87
Q gi|254780669|r 185 GA 186 (301)
Q Consensus 185 Gn 186 (301)
|-
T Consensus 118 ~~ 119 (330)
T 3e9m_A 118 GV 119 (330)
T ss_dssp TC
T ss_pred CC
T ss_conf 54
No 32
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=93.56 E-value=0.21 Score=28.70 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=60.3
Q ss_pred HHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 9886652876885228899998765-021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 108 RDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 108 ~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
+...+..+.++.+++.+ .+. +-+|++-|.+......++..++.+.||+|++-|+...+++|....++.....|-
T Consensus 43 ~~~~~~~~~~~~~~~~e-----ll~~~~iD~V~i~tp~~~H~~~~~~al~agkhV~~EKP~a~~~~e~~~l~~~~~~~g~ 117 (349)
T 3i23_A 43 AAPFKEKGVNFTADLNE-----LLTDPEIELITICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGV 117 (349)
T ss_dssp HHHHHTTTCEEESCTHH-----HHSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCCEECCHHH-----HHCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHHHHHHCCC
T ss_conf 99755389935799999-----9659998889988871456788999998499187517742002210220234542697
No 33
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans}
Probab=93.50 E-value=0.45 Score=26.54 Aligned_cols=226 Identities=10% Similarity=0.093 Sum_probs=124.6
Q ss_pred ECCCEEEECCCCCCEEECCCCCE--E-----------EEECCCCCCC----HHH----------HHHHHHHHHHHHHHCC
Q ss_conf 31770683578772797699706--9-----------9954863499----999----------9999999999655339
Q gi|254780669|r 23 HTNAAIHLGSGKNQVTFSNEQRF--V-----------LIAGPCQIES----HDH----------AFMIAEKLYAICQSLN 75 (301)
Q Consensus 23 ~~~~~~~ig~~~~~i~ig~~~~l--~-----------iIAGPCsiES----~e~----------~~~~A~~lk~~~~~~~ 75 (301)
-.-+.+.+|.+..-+++||+.-| + +.-.=|-..+ +.. ....|+.+.+.|+++.
T Consensus 12 ~~i~ev~iG~g~~~v~iGge~vlp~~~fe~~~~n~p~ia~~i~D~~~~~~~~~~~~~~~~~~~d~v~~Ak~~ve~GADiI 91 (310)
T 2h9a_B 12 SKVVEVTLGTGDKTVTLGGDSTLPFLTFEGEMPNPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVEYGADIV 91 (310)
T ss_dssp CCCCEEEESCGGGCEEEECCSSSTTCTTSSCCCSCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCCCEEEEECCCCCCCCEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 87469998788737998996665540116667889848999528995577999999987777769999999997299889
Q ss_pred -CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC-----CHHHHHHHHHH-CCE--EEECHHHCC
Q ss_conf -970660155768866632224567124888999886652876885228-----89999876502-157--882257628
Q gi|254780669|r 76 -IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVH-----TEQQCEAIADS-VDI--LQIPALLCR 146 (301)
Q Consensus 76 -~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~-----~~~~~e~~~~~-vDi--lQIgA~~~r 146 (301)
+++ . -|.|.+..- ..++-.+-.+.+.+..++|++-+.. ++.-++..++. .|. +--++ .--
T Consensus 92 dIg~--~-------StrPg~~~v-s~eee~~rV~~V~~~v~~pl~i~~~~~d~~d~~v~~~al~~~~~~~~li~~~-~~~ 160 (310)
T 2h9a_B 92 ALRL--V-------SAHPDGQNR-SGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSA-TKD 160 (310)
T ss_dssp EEEC--G-------GGCTTTTCC-CHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEE-CTT
T ss_pred EECC--C-------CCCCCCCCC-CHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC-CCC
T ss_conf 9715--1-------189998878-9999999999999986898074234244664999999999735103562335-400
Q ss_pred CH-HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC--CCEEEEECCCC-CCCHH--HCCCCCC-----CHHHHH
Q ss_conf 99-99999850597799836777899999999999972587--80899514654-44010--0000001-----068885
Q gi|254780669|r 147 QT-DLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA--KDVLFCERGTS-FGYNT--LVTDMRS-----IPIMTS 215 (301)
Q Consensus 147 qt-dLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn--~~i~lcERG~~-fgy~~--lvvD~~~-----i~~lk~ 215 (301)
|+ .++..+++.+.||.+.-+ ..++......+++.+.|- ++|++ .=|+. |||+- ....+.. +...+.
T Consensus 161 n~~~m~~~a~~~~~pvi~~~~--~d~~~~k~l~~~l~~~GI~~~~Iil-DPGig~fGk~~e~~~~~~~~iR~~aL~~~~~ 237 (310)
T 2h9a_B 161 NYKPIVATCMVHGHSVVASAP--LDINLSKQLNIMIMEMNLAPNRIIM-DPLIGALGYGIEYSYSIIERMRLGALTGDKI 237 (310)
T ss_dssp THHHHHHHHHHHTCEEEEECS--SCHHHHHHHHHHHHTTTCCGGGEEE-ECCCCCTTTTHHHHHHHHHHHHHHHHTTCGG
T ss_pred CHHHHHHHHHHCCCCEEEECC--CCHHHHHHHHHHHHHCCCCHHHEEE-ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 148999999982998999878--5389999999999986999778898-1576434678889999999999875334655
Q ss_pred HCCCEEECHHHHHHHCCC---CCCCCCCCHH----HH-HHHHHHHHHHCCCEEEE
Q ss_conf 187168711777421223---4532126388----99-99999999718988999
Q gi|254780669|r 216 MGVPVIFDASHSVQQPGI---HGNCSGGERQ----YI-VPLAKAAVAIGIAGIFL 262 (301)
Q Consensus 216 ~~~PVi~D~SHs~q~p~~---~~~~~gG~r~----~v-~~la~aa~a~G~dGlfi 262 (301)
+++|+++-+|.-...-.- .....-|..+ +. ..+|-+++..|+|=+.+
T Consensus 238 lg~Pil~g~srks~~~k~~~~~~~~~~g~~~~~~~~~e~~~a~~~~~~GadI~rv 292 (310)
T 2h9a_B 238 LAMPVVCFIGQEAWKAKEAKDPEVAEWGDYALRAIHWETVTTVALIQAGGHLFVM 292 (310)
T ss_dssp GCSCBEECHHHHHTTSHHHHCSCCGGGCCHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 7998798206778757762588400026524433579999999999879989996
No 34
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=93.46 E-value=0.29 Score=27.76 Aligned_cols=81 Identities=17% Similarity=0.127 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 88899988665287688522889999876502157882257628999999985059779983677789999999999997
Q gi|254780669|r 103 GREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLH 182 (301)
Q Consensus 103 gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~ 182 (301)
..+-.+++.++||++-.++-.+ +.+.+-+|++=|..-.-...++..++.+.||+|++-||..++++|+...++...
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~~~----~ll~~~iD~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~ 111 (323)
T 1xea_A 36 NPKVLGTLATRYRVSATCTDYR----DVLQYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAE 111 (323)
T ss_dssp CHHHHHHHHHHTTCCCCCSSTT----GGGGGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCEECCHH----HHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCC
T ss_conf 9999999999839984108899----995589999998178267799999998638966874576442555212101111
Q ss_pred HCCCC
Q ss_conf 25878
Q gi|254780669|r 183 AHGAK 187 (301)
Q Consensus 183 ~~Gn~ 187 (301)
..|-.
T Consensus 112 ~~~~~ 116 (323)
T 1xea_A 112 KHHQP 116 (323)
T ss_dssp HTTCC
T ss_pred CCCCC
T ss_conf 34553
No 35
>2o4u_X Dimeric dihydrodiol dehydrogenase; NADP-binding rossmann-fold domain, predominantly anti- parallel beta sheet, oxidoreductase; 2.00A {Macaca fascicularis} PDB: 2o48_X 2poq_X*
Probab=93.14 E-value=0.27 Score=28.03 Aligned_cols=78 Identities=9% Similarity=0.154 Sum_probs=60.9
Q ss_pred HHHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8999886652876885228899998765-021578822576289999999850597799836777899999999999972
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHA 183 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~ 183 (301)
+-.+++.++|++|-.++ +.++ .+. +.+|++-|.+-....++++.++.+.||+|++-|+...+..|....++-...
T Consensus 40 ~~~~~~a~~~~~~~~~~--~~~~--ll~~~~iD~v~I~tp~~~h~~~~~~al~~gkhVl~EKP~~~~~~e~~~l~~~a~~ 115 (334)
T 2o4u_X 40 SRAKEFAQKHDIPKAYG--SYEE--LAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARS 115 (334)
T ss_dssp HHHHHHHHHHTCSEEES--SHHH--HHTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEC--CHHH--HHCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999839982548--9999--9569999889990565411477899998699188469862122210234444542
Q ss_pred CCC
Q ss_conf 587
Q gi|254780669|r 184 HGA 186 (301)
Q Consensus 184 ~Gn 186 (301)
.|.
T Consensus 116 ~~~ 118 (334)
T 2o4u_X 116 RGL 118 (334)
T ss_dssp HTC
T ss_pred CCC
T ss_conf 354
No 36
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P*
Probab=93.07 E-value=0.52 Score=26.10 Aligned_cols=148 Identities=18% Similarity=0.245 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 488899988665287688522889999876502-1578822576289999999850597799836777899999999999
Q gi|254780669|r 102 KGREIFRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQK 180 (301)
Q Consensus 102 ~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~ek 180 (301)
+-|+-|.+...++|+-++.|||+..+++.+.+. ++++-|-.|+-.+++ .+++.......+
T Consensus 144 ~~l~~l~~~a~~lgl~~LvEvh~~~el~~a~~~~a~iiGINnRdL~t~~-------------------~d~~~~~~l~~~ 204 (452)
T 1pii_A 144 DQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLS-------------------IDLNRTRELAPK 204 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTE-------------------ECTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCE-------------------ECHHHHHHHHCC
T ss_conf 8999999999984886599978999999998289998999798863150-------------------877999998610
Q ss_pred HHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEE--------ECHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 97258780899514654440100000001068885187168--------7117774212234532126388999999999
Q gi|254780669|r 181 LHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVI--------FDASHSVQQPGIHGNCSGGERQYIVPLAKAA 252 (301)
Q Consensus 181 i~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi--------~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa 252 (301)
+ ...-+++.|-|+.. .. |.+. |+....-|. -||...++.--.+.....|-+.. .-+++|
T Consensus 205 i---p~~~~~vseSGI~~-~~----d~~~---~~~g~~~~LiG~~lm~~~~~~~~~~~l~~~~~~icgit~~--eda~~a 271 (452)
T 1pii_A 205 L---GHNVTVISESGINT-YA----QVRE---LSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRG--QDAKAA 271 (452)
T ss_dssp H---CTTSEEEEESCCCC-HH----HHHH---HTTTCSEEEECHHHHTCSCHHHHHHHHHHCSCEECCCCSH--HHHHHH
T ss_pred C---CCCCEEEECCCCCC-HH----HHHH---HHCCCCEEEECHHHCCCCCHHHHHHHHHCCCCCCCCCCCH--HHHHHH
T ss_conf 7---87867998479999-99----9999---9817999998956438999999999995699888775677--999999
Q ss_pred HHHCCC--EEEEEECCCHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 971898--89998369833479782018688999999999
Q gi|254780669|r 253 VAIGIA--GIFLETHQDPDNAPSDGPNMINIKDLPKLLSQ 290 (301)
Q Consensus 253 ~a~G~d--GlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~ 290 (301)
..+|+| |+.. .++ ++--+++++..++...
T Consensus 272 ~~~GaD~iGfIf--~~~-------SpR~V~~e~a~~i~~~ 302 (452)
T 1pii_A 272 YDAGAIYGGLIF--VAT-------SPRCVNVEQAQEVMAA 302 (452)
T ss_dssp HHHTCSEEEEEC--CTT-------CTTBCCHHHHHHHHHH
T ss_pred HHCCCCEEEEEC--CCC-------CCCCCCHHHHHHHHHH
T ss_conf 866998897757--899-------9886799999999974
No 37
>1zh8_A Oxidoreductase; TM0312, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE NAP; 2.50A {Thermotoga maritima MSB8} SCOP: c.2.1.3 d.81.1.5
Probab=92.85 E-value=0.56 Score=25.91 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=60.3
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 9998866528768852288999987650-215788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-.++++++|+.+.+++ +.+ |.+++ -+|++-|..-.....+++.++.+.||+|++-||...+++|....++.....
T Consensus 57 ~~~~~~~~~~~~~~~~--~~~--ell~~~~iD~V~I~tp~~~H~~~~~~al~agk~Vl~EKP~~~~~~e~~~l~~~a~~~ 132 (340)
T 1zh8_A 57 HAEEFAKMVGNPAVFD--SYE--ELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKS 132 (340)
T ss_dssp HHHHHHHHHSSCEEES--CHH--HHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCEEC--CHH--HHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 9999999839983538--899--995599999899138703457899999866996576367413211134666677651
Q ss_pred CC
Q ss_conf 87
Q gi|254780669|r 185 GA 186 (301)
Q Consensus 185 Gn 186 (301)
|.
T Consensus 133 ~~ 134 (340)
T 1zh8_A 133 EK 134 (340)
T ss_dssp SS
T ss_pred CC
T ss_conf 33
No 38
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=92.73 E-value=0.39 Score=26.96 Aligned_cols=70 Identities=17% Similarity=0.234 Sum_probs=56.8
Q ss_pred HHHCCEEEEECCCHHHHHHHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 6528768852288999987650-21578822576289999999850597799836777899999999999972587
Q gi|254780669|r 112 KKYGFPILTDVHTEQQCEAIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 112 ~~~glpv~TeV~~~~~~e~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
.++++++.++ .+ +.+.+ -+|++-|.+-....++++.++.+.||+|++-||...+++|....++.....|-
T Consensus 47 ~~~~~~~~~~---~~--ell~~~~iD~V~i~tp~~~h~~~~~~al~~gkhv~~EKP~a~~~~e~~~l~~~~~~~~~ 117 (359)
T 3e18_A 47 AQKGLKIYES---YE--AVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNK 117 (359)
T ss_dssp HTTTCCBCSC---HH--HHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred HHCCCCCCCC---HH--HHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
T ss_conf 8629970199---99--99559998989987880552356788885398199957864208788788999975276
No 39
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=92.42 E-value=0.63 Score=25.54 Aligned_cols=82 Identities=11% Similarity=0.102 Sum_probs=60.6
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 999886652876885228899998765-0215788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-.++++++||+++-+ ..+.+ +.++ .-+|++-|..-....++++.++.+.|++|++-|+...+..+....++.....
T Consensus 40 ~~~~~~~~~~~~~~~-~~~~~--~ll~~~~~D~V~i~tp~~~H~~~~~~al~~gkhv~~EKP~a~~~~e~~~l~~~a~~~ 116 (344)
T 3mz0_A 40 AAQKVVEQYQLNATV-YPNDD--SLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKV 116 (344)
T ss_dssp HHHHHHHHTTCCCEE-ESSHH--HHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCE-ECCHH--HHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999985899806-79999--995599988899626521159999999854997264687421200478999998752
Q ss_pred CCCCEE
Q ss_conf 878089
Q gi|254780669|r 185 GAKDVL 190 (301)
Q Consensus 185 Gn~~i~ 190 (301)
+..-++
T Consensus 117 ~~~~~~ 122 (344)
T 3mz0_A 117 GKRLVQ 122 (344)
T ss_dssp SSCCEE
T ss_pred CCCEEE
T ss_conf 043057
No 40
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A
Probab=92.31 E-value=0.65 Score=25.46 Aligned_cols=203 Identities=17% Similarity=0.162 Sum_probs=124.7
Q ss_pred CCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH
Q ss_conf 999999999999999655339-9706601557688666322245671248889998866528768852288999987650
Q gi|254780669|r 55 ESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIAD 133 (301)
Q Consensus 55 ES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~ 133 (301)
-+.+.+++-|+.+.+-|+++. +|+. ++-+.+...|+ .. -++.-+.+++.++++++.++--|-..++-++.+.+
T Consensus 35 ~~~~~a~~~a~~mi~~GAdiIDIGge--STrPga~~is~---ee-E~~Rl~pvi~~l~~~~~~~iSIDT~~~~Va~~al~ 108 (282)
T 1aj0_A 35 NSLIDAVKHANLMINAGATIIDVGGE--STRPGAAEVSV---EE-ELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAK 108 (282)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESS--CCSTTCCCCCH---HH-HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCE--ECCCCCCCCCH---HH-HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
T ss_conf 89999999999999879969987973--47998912788---99-99887899999862467208886899899999996
Q ss_pred -HCCEEE-ECHHHCCCHHHHHHHHHCCCEEEEECCC-------C----C----CHHH-HHHHHHHHHHCCCC-CEEEEEC
Q ss_conf -215788-2257628999999985059779983677-------7----8----9999-99999999725878-0899514
Q gi|254780669|r 134 -SVDILQ-IPALLCRQTDLLTAAAQTGRVINVKKGQ-------F----L----SPWE-MHNILQKLHAHGAK-DVLFCER 194 (301)
Q Consensus 134 -~vDilQ-IgA~~~rqtdLl~a~a~t~kpV~iKkgq-------~----~----s~~e-~~~a~eki~~~Gn~-~i~lcER 194 (301)
.+||+- |.++ +.-.++..+++.+.++.+---+ . . ...+ +...++.+.+.|-. +=++..=
T Consensus 109 ~G~~iINDvsg~--~~~~~~~~va~~~~~~vl~h~~g~p~~~~~~~~~~dvi~~v~~~f~~~i~~~~~~GI~~~~IilDP 186 (282)
T 1aj0_A 109 VGAHIINDIRSL--SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDP 186 (282)
T ss_dssp TTCCEEEETTTT--CSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCEEEECCCCC--CCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEECCC
T ss_conf 598189444335--660578888642998387504899776544786543467899999999999998699876083688
Q ss_pred CCCCCCHH--HCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCCH
Q ss_conf 65444010--0000001068885187168711777421223453212638899-99999999718988999836983
Q gi|254780669|r 195 GTSFGYNT--LVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYI-VPLAKAAVAIGIAGIFLETHQDP 268 (301)
Q Consensus 195 G~~fgy~~--lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v-~~la~aa~a~G~dGlfiE~Hp~P 268 (301)
|+-||.+. ...=++++..++.+++|+.+-.|---......+.. ...|... ..++-.|+..|++ ++-||.-.
T Consensus 187 G~GFgK~~~~n~~ll~~l~~~~~l~~PilvG~SRKsfi~~~~~~~-~~eRl~~Tla~~~~a~~~Ga~--ilRvHdV~ 260 (282)
T 1aj0_A 187 GFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVG-PSERLSGSLACAVIAAMQGAH--IIRVHDVK 260 (282)
T ss_dssp CTTSSCCHHHHHHHHHTGGGGGGGCSCBEECCTTCHHHHHHHTCC-GGGCHHHHHHHHHHHHHTTCS--EEEESCHH
T ss_pred CCCCCCCHHHHHHHHHCHHHHHCCCCCEEEECCHHHHHHHHHCCC-HHHHCHHHHHHHHHHHHCCCC--EEEECCHH
T ss_conf 867688855249999682877347982599633877888884799-565031699999999987999--99959889
No 41
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.09 E-value=0.69 Score=25.28 Aligned_cols=191 Identities=16% Similarity=0.262 Sum_probs=110.5
Q ss_pred ECCCEEEECCCCCCEEECCCCCEEEEECCCCCCC--HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 3177068357877279769970699954863499--99999999999996553399706601557688666322245671
Q gi|254780669|r 23 HTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIES--HDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGL 100 (301)
Q Consensus 23 ~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES--~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gl 100 (301)
...+.+.+ +++.|||++|..+=+ -+.... -+..++-...|.+.|..+. |-.. +.
T Consensus 14 R~T~~V~V----G~v~IGG~aPv~VQS-Mt~t~t~D~eat~~qI~~L~~aG~EiV-------------RvaV-----p~- 69 (366)
T 3noy_A 14 RKTRQIRV----GNVKIGGDAPIVVQS-MTSTKTHDVEATLNQIKRLYEAGCEIV-------------RVAV-----PH- 69 (366)
T ss_dssp CCCCCEEE----TTEEESTTSCCEEEE-ECCSCTTCHHHHHHHHHHHHHTTCCEE-------------EEEC-----CS-
T ss_pred CCCEEEEE----CCEEECCCCCCEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCEE-------------EECC-----CC-
T ss_conf 46537998----286247999501565-599975459999999999998599989-------------9844-----99-
Q ss_pred HHHHHHHHHHHHHHCCEEEEECCCHHHHHH--HHHHCCEEEECHHHCCCHH----HHHHHHHCCCEEEEE----------
Q ss_conf 248889998866528768852288999987--6502157882257628999----999985059779983----------
Q gi|254780669|r 101 KKGREIFRDLKKKYGFPILTDVHTEQQCEA--IADSVDILQIPALLCRQTD----LLTAAAQTGRVINVK---------- 164 (301)
Q Consensus 101 e~gL~il~e~k~~~glpv~TeV~~~~~~e~--~~~~vDilQIgA~~~rqtd----Ll~a~a~t~kpV~iK---------- 164 (301)
.+..+-|.+++++..+|++-|+|-..++.. +...+|-+.|---|.-..+ +++++.+.++|+-+=
T Consensus 70 ~~~a~al~~I~~~~~iPlvaDiHf~~~la~~a~~~g~~kiRINPGNig~~~~~~~vv~~ak~~~i~iRIGvN~GSL~~~~ 149 (366)
T 3noy_A 70 KEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDL 149 (366)
T ss_dssp HHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHH
T ss_pred HHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH
T ss_conf 99999699999718988540043353355677664220023574334722776899999997699736535657578999
Q ss_pred --CCCCCCHHHHH----HHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHHHHCCCCCCC
Q ss_conf --67778999999----99999972587808995146544401000000010688-851871687117774212234532
Q gi|254780669|r 165 --KGQFLSPWEMH----NILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSVQQPGIHGNC 237 (301)
Q Consensus 165 --kgq~~s~~e~~----~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~q~p~~~~~~ 237 (301)
|-...+++-|. ..++.+.+.|-.++++ |+-..+..+-+++--.+ +++.+|.-+-.|.+
T Consensus 150 l~~~~~~~~~amvesal~~i~~~e~~~f~~i~i-----S~KsS~v~~~i~ayrlla~~~dyPLHLGvTEA---------- 214 (366)
T 3noy_A 150 LEKYGYPSAEALAESALRWSEKFEKWGFTNYKV-----SIKGSDVLQNVRANLIFAERTDVPLHIGITEA---------- 214 (366)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEE-----EEECSSHHHHHHHHHHHHHHCCCCEEECCSSC----------
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEE-----EEEECCHHHHHHHHHHHHHCCCCCEEEEEEEC----------
T ss_conf 976246302346589999999998648876446-----78844199999999998642687627767603----------
Q ss_pred CCCCHHHHHHHHHHHHHHC
Q ss_conf 1263889999999999718
Q gi|254780669|r 238 SGGERQYIVPLAKAAVAIG 256 (301)
Q Consensus 238 ~gG~r~~v~~la~aa~a~G 256 (301)
|... ..+-++++++|
T Consensus 215 --G~~~--~g~IkSsigiG 229 (366)
T 3noy_A 215 --GMGT--KGIIKSSVGIG 229 (366)
T ss_dssp --CSHH--HHHHHHHHHHH
T ss_pred --CCCC--CCCCCCHHHHH
T ss_conf --6752--22125377799
No 42
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=91.99 E-value=0.71 Score=25.21 Aligned_cols=114 Identities=12% Similarity=0.107 Sum_probs=71.8
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99886652876885228899998765-02157882257628999999985059779983677789999999999997258
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHG 185 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~G 185 (301)
.++..++|+++.+++ +.++ .++ +-+|++-|..-.....+++.++.+.|++|++-||...+++|.....+.....+
T Consensus 38 ~~~~~~~~~~~~~~~--~~~e--~l~~~~iD~v~i~tp~~~H~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~~~~~~ 113 (332)
T 2glx_A 38 GAAYATENGIGKSVT--SVEE--LVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAG 113 (332)
T ss_dssp HHHHHHHTTCSCCBS--CHHH--HHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEC--CHHH--HHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 999999809994018--9999--956999999999688446578899999869987536773035789999887665402
Q ss_pred CCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEECHHHHH
Q ss_conf 7808995146544401000000010688851871687117774
Q gi|254780669|r 186 AKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFDASHSV 228 (301)
Q Consensus 186 n~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~ 228 (301)
. .+++ |...-|+..+..++.+..-.+.+-++-+...|..
T Consensus 114 ~-~~~v---~~~~r~~p~~~~~~~~i~~g~lG~i~~~~~~~~~ 152 (332)
T 2glx_A 114 V-VLGT---NHHLRNAAAHRAMRDAIAEGRIGRPIAARVFHAV 152 (332)
T ss_dssp C-CEEE---CCCGGGSHHHHHHHHHHHTTTTSSEEEEEEEEEC
T ss_pred C-CCCC---CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf 3-3333---3112103899999999975888845999999734
No 43
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=91.94 E-value=0.72 Score=25.18 Aligned_cols=80 Identities=11% Similarity=0.049 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHCCE--EEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 888999886652876--885228899998765-02157882257628999999985059779983677789999999999
Q gi|254780669|r 103 GREIFRDLKKKYGFP--ILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQ 179 (301)
Q Consensus 103 gL~il~e~k~~~glp--v~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~e 179 (301)
...-.+++.++|+++ +-++ .++ .+. +-+|++-|..-.-..++++.++.+.||+|++-||...+++|.....+
T Consensus 38 ~~~~~~~~~~~~~~~~~~y~~---~~e--ll~~~~iD~V~i~tp~~~H~~~~~~al~~gk~Vl~EKP~a~~~~ea~~l~~ 112 (337)
T 3ip3_A 38 DLSKLEKAISEMNIKPKKYNN---WWE--MLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRS 112 (337)
T ss_dssp CCHHHHHHHHTTTCCCEECSS---HHH--HHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCEEECC---HHH--HHCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH
T ss_conf 899999999984999704099---999--964899888999588616799999999879969994785444012223455
Q ss_pred HHHHCCCC
Q ss_conf 99725878
Q gi|254780669|r 180 KLHAHGAK 187 (301)
Q Consensus 180 ki~~~Gn~ 187 (301)
-....|+.
T Consensus 113 ~~~~~~~~ 120 (337)
T 3ip3_A 113 VYQKVRNE 120 (337)
T ss_dssp HHHHHTTT
T ss_pred HHHCCCCC
T ss_conf 43200243
No 44
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, X-RAY diffraction, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=91.89 E-value=0.59 Score=25.76 Aligned_cols=113 Identities=14% Similarity=0.032 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--ECCCHHHHHHHHH-HCC
Q ss_conf 9999999999655339970660155768866632224567124888999886652876885--2288999987650-215
Q gi|254780669|r 60 AFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DVHTEQQCEAIAD-SVD 136 (301)
Q Consensus 60 ~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV~~~~~~e~~~~-~vD 136 (301)
..++|+...+.|+.. + -- =|-+..|.|. ++.|+.+++.+.+||+- =|-++.|+..... .+|
T Consensus 67 p~~~a~~y~~~GA~a----i-SV------LTe~~~F~Gs-----~~dl~~vr~~~~~PiLrKDFIid~~QI~eAr~~GAD 130 (254)
T 1vc4_A 67 PVEAALAYARGGARA----V-SV------LTEPHRFGGS-----LLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGAS 130 (254)
T ss_dssp HHHHHHHHHHTTCSE----E-EE------ECCCSSSCCC-----HHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHCCCCE----E-EE------ECCCCCCCCC-----HHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCC
T ss_conf 999999999879918----9-99------6587778987-----899999998618872027774769999999982862
Q ss_pred EEEECHHHCCC--HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 78822576289--999999850597799836777899999999999972587808995146
Q gi|254780669|r 137 ILQIPALLCRQ--TDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 137 ilQIgA~~~rq--tdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG 195 (301)
.+-+-|.+..+ .+|+..+.+.|--+++.=+ +.+|+ ++....|.+-|.+--|-
T Consensus 131 aiLLIaal~~~~l~~l~~~A~~lGle~LVEvh---~~~El----~~a~~~~a~iIGINnRd 184 (254)
T 1vc4_A 131 AALLIVALLGELTGAYLEEARRLGLEALVEVH---TEREL----EIALEAGAEVLGINNRD 184 (254)
T ss_dssp EEEEEHHHHGGGHHHHHHHHHHHTCEEEEEEC---SHHHH----HHHHHHTCSEEEEESBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC---CHHHH----HHHHCCCCCEEEEECCC
T ss_conf 79999998788899999999984886278707---88897----24223899789873577
No 45
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative; 2.00A {Streptococcus agalactiae serogroup V}
Probab=91.77 E-value=0.29 Score=27.82 Aligned_cols=73 Identities=18% Similarity=0.259 Sum_probs=56.1
Q ss_pred HHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 86652876885228899998765-021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 110 LKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 110 ~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
++++|++|-.++- .+ +.+. .-+|++-|.+-.....++++++.+.||+|++-||...+++|.....+...+.|.
T Consensus 46 ~a~~~~~~~~~~~--~~--~ll~~~~~D~V~I~tp~~~H~~~~~~al~~gk~vl~EKP~a~~~~e~~~l~~~~~~~~~ 119 (329)
T 3evn_A 46 FANKYHLPKAYDK--LE--DMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNL 119 (329)
T ss_dssp ---CCCCSCEESC--HH--HHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCCCEECC--HH--HHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 9998599806689--99--99628898889905826655577899998799899972454558998654445531354
No 46
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=91.65 E-value=0.5 Score=26.24 Aligned_cols=55 Identities=20% Similarity=0.146 Sum_probs=48.4
Q ss_pred HHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 5021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 132 ADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 132 ~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
.+-+|++.|-+-+....+++.++.+.||+|++-||..++++|....++...+.+.
T Consensus 70 ~~~iD~V~I~tp~~~H~~~~~~al~~gk~Vl~EKP~a~~~~e~~~l~~~~~~~~~ 124 (312)
T 3o9z_A 70 GEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGR 124 (312)
T ss_dssp TCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 7996599998995789999999997199489804875877787789999886398
No 47
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans}
Probab=91.49 E-value=0.8 Score=24.86 Aligned_cols=220 Identities=16% Similarity=0.149 Sum_probs=134.5
Q ss_pred CCCEEEECCCCCCEEECCCCC----------EEEEE-CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC-CC
Q ss_conf 177068357877279769970----------69995-4863499999999999999965533997066015576886-66
Q gi|254780669|r 24 TNAAIHLGSGKNQVTFSNEQR----------FVLIA-GPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANR-SS 91 (301)
Q Consensus 24 ~~~~~~ig~~~~~i~ig~~~~----------l~iIA-GPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanR-tS 91 (301)
+-+.+.||.|...+++||+.= ...|| ==|-..+++.+....+.+.+...+ -.+-.|++-+--- | +|
T Consensus 60 pIreV~iG~G~kav~IGGEtvLfRhE~tf~Npp~iAi~V~D~m~ee~i~~~~~~~~~~~~~-rVG~~l~~D~ial-r~~S 137 (445)
T 2h9a_A 60 PVALIKVGKGEKVLEIGHETVLFRHDKRFEHPCGLAILVEDTLSEGEIKERVEKINKLVFD-RVGQMHSVNLVAL-KGSS 137 (445)
T ss_dssp CSCCEEESCTTSCEEECCCCCSSGGGSCCCSCCEEEEEEETTSCHHHHHHHHHHHHTCEEE-ETTEEEECCEEEE-ECTT
T ss_pred CCCEEEECCCCCEEEECCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH-HHHHHHCCCEEEE-EECC
T ss_conf 8614786378734998991367504315679980699973588738799999888887788-8888724877999-8189
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH-CC-EEEECHHHCCCHHHHHHHHH-CCCEEEEECCCC
Q ss_conf 3222456712488899988665287688522889999876502-15-78822576289999999850-597799836777
Q gi|254780669|r 92 LAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADS-VD-ILQIPALLCRQTDLLTAAAQ-TGRVINVKKGQF 168 (301)
Q Consensus 92 ~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~-vD-ilQIgA~~~rqtdLl~a~a~-t~kpV~iKkgq~ 168 (301)
- .-++-.+..+++.+..++|++-. .+++-++.++++ .| =.=|.+-+--|++-+-++++ .+-||-++-
T Consensus 138 ~------Dpe~fak~Vk~VaeavdvPLIL~-sD~evlkaale~~~~~rpLL~aAt~dNy~~m~~lAk~y~~plvvss--- 207 (445)
T 2h9a_A 138 Q------DAATFAKAVATAREVTDLPFILI-GTPEQLAAALETEGANNPLLYAATADNYEQMVELAKKYNVPLTVSA--- 207 (445)
T ss_dssp C------CHHHHHHHHHHHHHHCCSCEEEE-SCHHHHHHHHHHHGGGCCEEEEECTTTHHHHHHHHHHHTCCEEEEC---
T ss_pred C------CHHHHHHHHHHHHHCCCCCEEEE-CCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEC---
T ss_conf 9------99999999999982479778996-8899999999984777875536778689999999997597399957---
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCC-CCCC--HHHCCCCCCCHHHH---HHCCCEEECHHHHHHHCCCCCCCCCCCH
Q ss_conf 8999999999999725878089951465-4440--10000000106888---5187168711777421223453212638
Q gi|254780669|r 169 LSPWEMHNILQKLHAHGAKDVLFCERGT-SFGY--NTLVTDMRSIPIMT---SMGVPVIFDASHSVQQPGIHGNCSGGER 242 (301)
Q Consensus 169 ~s~~e~~~a~eki~~~Gn~~i~lcERG~-~fgy--~~lvvD~~~i~~lk---~~~~PVi~D~SHs~q~p~~~~~~~gG~r 242 (301)
.++++...-++++.+.|.++|++=- |+ .-|| .+. +-+|-..+.+ .+++|+|.-|..+ .
T Consensus 208 ~Din~lk~L~~~l~~~Gv~dIVLDP-g~~~lg~~le~~-~~IRRaAl~~~dr~lgyPiI~~~~~~--------------~ 271 (445)
T 2h9a_A 208 KGLDALAELVQKITALGYKNLILDP-QPENISEGLFYQ-TQIRRLAIKKLFRPFGYPTIAFALDE--------------N 271 (445)
T ss_dssp SSHHHHHHHHHHHHHTTCCCEEEEC-CCSSHHHHHHHH-HHHHHHHHHSCCGGGCSCBEEECCCS--------------S
T ss_pred CCHHHHHHHHHHHHHCCCCCEEECC-CCCCHHHHHHHH-HHHHHHHHHCCCCCCCCCEEEECCCC--------------C
T ss_conf 9989999999999975997489889-872077899999-99999997547955689677642678--------------8
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHC
Q ss_conf 89999999999718988999836983347
Q gi|254780669|r 243 QYIVPLAKAAVAIGIAGIFLETHQDPDNA 271 (301)
Q Consensus 243 ~~v~~la~aa~a~G~dGlfiE~Hp~P~~A 271 (301)
.+-+.+.-+....-+.++++=-.-+|..+
T Consensus 272 ~~~e~~~As~~~~kYa~i~vl~~~~~~~~ 300 (445)
T 2h9a_A 272 PYQAVMEASVYIAKYAGIIVLNTVEPADI 300 (445)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCHHHH
T ss_pred HHHHHHHHHHHHHHHCCEEEECCCCHHHH
T ss_conf 59999999999987565899726888886
No 48
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=91.38 E-value=0.39 Score=26.91 Aligned_cols=76 Identities=17% Similarity=0.169 Sum_probs=59.1
Q ss_pred HHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf 66528768852288999987650215788225762899999998505977998367778999999999999725878089
Q gi|254780669|r 111 KKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVL 190 (301)
Q Consensus 111 k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~ 190 (301)
++.+++++.|+. +++ .-.+-+|++-|.+-.-..+++..++.+.||+|++-|+...+.++....++.....|. .++
T Consensus 48 ~~~~~~~~~~~~---~~l-l~~~~iD~V~i~tp~~~H~~~~~~al~~gkhv~~EKP~a~~~~ea~~l~~~~~~~~~-~~~ 122 (352)
T 3kux_A 48 ADWPAIPVVSDP---QML-FNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGL-LLS 122 (352)
T ss_dssp TTCSSCCEESCH---HHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTC-CEE
T ss_pred HHCCCCCEECCH---HHH-HCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHCCC-CCE
T ss_conf 746999768989---999-569999989988868888988999998599772268742222321245667876386-300
Q ss_pred E
Q ss_conf 9
Q gi|254780669|r 191 F 191 (301)
Q Consensus 191 l 191 (301)
+
T Consensus 123 v 123 (352)
T 3kux_A 123 V 123 (352)
T ss_dssp E
T ss_pred E
T ss_conf 1
No 49
>2vp8_A Dihydropteroate synthase 2; RV1207, transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=91.28 E-value=0.84 Score=24.73 Aligned_cols=201 Identities=17% Similarity=0.134 Sum_probs=121.9
Q ss_pred CHHHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCEEEEECCCHHHHHHHHH
Q ss_conf 9999999999999965533-9970660155768866632224567124888999886652-8768852288999987650
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSL-NIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY-GFPILTDVHTEQQCEAIAD 133 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~-~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~-glpv~TeV~~~~~~e~~~~ 133 (301)
+.+.+.+-|+.+.+-|+++ .+|+- ++-+-+ + ....++ ++.-+.+++.+++++ ++++--|-..++-++.+.+
T Consensus 63 ~~~~a~~~~~~mi~~GAdIIDIGae--STrPg~-~--is~eeE--~~Rl~pvi~~l~~~~~~i~iSIDT~~~~Va~~Al~ 135 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGV--KAGPGE-R--VDVDTE--ITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACA 135 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC---------------CHHHH--HHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCC--CCCCCC-C--CCHHHH--HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHH
T ss_conf 9999999999999879979997982--389989-8--873576--66430799998741888608862880999999986
Q ss_pred -HCCEEE-ECHHHCCCHHHHHHHHHCCCEEEEECCCCC-------------CHHH----H----HHHHHHHHHCCCC-CE
Q ss_conf -215788-225762899999998505977998367778-------------9999----9----9999999725878-08
Q gi|254780669|r 134 -SVDILQ-IPALLCRQTDLLTAAAQTGRVINVKKGQFL-------------SPWE----M----HNILQKLHAHGAK-DV 189 (301)
Q Consensus 134 -~vDilQ-IgA~~~rqtdLl~a~a~t~kpV~iKkgq~~-------------s~~e----~----~~a~eki~~~Gn~-~i 189 (301)
.+||+- |..+ +.-++++.+++.+.++.+---+.. ..++ + ...++.+...|.. +=
T Consensus 136 ~Ga~iINDVsG~--~D~~m~~~~a~~~~~~ilmH~~g~~p~~~~~~~~~~~~~~~v~~~~~~~l~~~~~~~~~~GI~~~~ 213 (318)
T 2vp8_A 136 AGADLINDTWGG--VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREK 213 (318)
T ss_dssp HTCCEEEETTSS--SSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CCCCEEECCCCC--CCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 395499743423--696788888743886899725788986304431023320167888999999988899985980875
Q ss_pred EEEECCCCCCCH--HHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHH--HHHHCCCEEEEEEC
Q ss_conf 995146544401--00000001068885187168711777421223453212638899999999--99718988999836
Q gi|254780669|r 190 LFCERGTSFGYN--TLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKA--AVAIGIAGIFLETH 265 (301)
Q Consensus 190 ~lcERG~~fgy~--~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~a--a~a~G~dGlfiE~H 265 (301)
++..=|+-||.+ ...-=++++..++++++|+++-.|.=-..-.-.+... -.|.. .+++-+ |+..|+ -++-||
T Consensus 214 IilDPGiGFgKt~~~n~~ll~~l~~l~~lg~PiLvG~SRKsfig~i~~~~~-~~Rl~-~Tlaa~~~a~~~Ga--~iiRvH 289 (318)
T 2vp8_A 214 VLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDL-TERLE-GTLAATALAAAAGA--RMFRVH 289 (318)
T ss_dssp EEEETTTTCCTTSHHHHHHHHTHHHHHTTSSCBEECCC----------------CHH-HHHHHHHHHHHTTC--CEEEES
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCH-HHHHH-HHHHHHHHHHHCCC--CEEEEC
T ss_conf 167888685766300499997788774279818999681689998858897-88537-99999999998799--999829
Q ss_pred CCHH
Q ss_conf 9833
Q gi|254780669|r 266 QDPD 269 (301)
Q Consensus 266 p~P~ 269 (301)
.-.+
T Consensus 290 dV~~ 293 (318)
T 2vp8_A 290 EVAA 293 (318)
T ss_dssp CHHH
T ss_pred CHHH
T ss_conf 8699
No 50
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=91.23 E-value=0.42 Score=26.72 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=49.1
Q ss_pred HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 133 DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 133 ~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
+-+|++-|.+-+-..++++.++.+.||+|++-||..++.+|.....+.....|.
T Consensus 64 ~~iDaV~I~tp~~~H~~~~~~al~~gkhV~~EKPla~~~~e~~~l~~~a~~~~~ 117 (294)
T 1lc0_A 64 QEIDVAYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGR 117 (294)
T ss_dssp SSEEEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 999899992895666899999997599734206763899999999999998199
No 51
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomerase; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=91.20 E-value=0.8 Score=24.87 Aligned_cols=48 Identities=17% Similarity=0.248 Sum_probs=28.1
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHCCEEEEECC
Q ss_conf 3399706601557688666322245---67124888999886652876885228
Q gi|254780669|r 73 SLNIGLVYKSSFDKANRSSLAGKRG---VGLKKGREIFRDLKKKYGFPILTDVH 123 (301)
Q Consensus 73 ~~~~~~ifK~sfdKanRtS~~sfrG---~Gle~gL~il~e~k~~~glpv~TeV~ 123 (301)
+.+...+|=+||--|+ | .++.- +.+++-+...+++....++||+-|.-
T Consensus 37 ~aGf~ai~~ss~~~a~--s-lG~pD~~~~~~~e~~~~~~~I~~~~~iPv~vD~d 87 (295)
T 1s2w_A 37 EAGFKGIWGSGLSVSA--Q-LGVRDSNEASWTQVVEVLEFMSDASDVPILLDAD 87 (295)
T ss_dssp HHTCSCEEECCHHHHH--T-C---------CHHHHHHHHHHHHTCSSCEEEECC
T ss_pred HCCCCEEEECHHHHHH--H-CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 8599999815699999--7-6999999898789999998774025775035234
No 52
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=90.88 E-value=0.92 Score=24.48 Aligned_cols=139 Identities=19% Similarity=0.279 Sum_probs=80.0
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEEC---------------------------------------CCHHHHHHH-HHHC
Q ss_conf 456712488899988665287688522---------------------------------------889999876-5021
Q gi|254780669|r 96 RGVGLKKGREIFRDLKKKYGFPILTDV---------------------------------------HTEQQCEAI-ADSV 135 (301)
Q Consensus 96 rG~Gle~gL~il~e~k~~~glpv~TeV---------------------------------------~~~~~~e~~-~~~v 135 (301)
.|..++++.++|.+-|.+ .+||+.+- ...+.++.+ ...+
T Consensus 168 ~~~~l~~A~~~l~~~rie-~lpvvd~~g~l~glit~~di~~~~~~p~a~~D~~grL~VgAAVg~~~d~~~Ra~~Lv~aGv 246 (491)
T 1zfj_A 168 VGTDLETAERILHEHRIE-KLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGA 246 (491)
T ss_dssp TTCCHHHHHHHHHHTTCS-EEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHH-CCCEECCCCCEEEEEEECCHHHHHHCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 798989999999874552-0647867896888998421244330862453245778999996777348999999997489
Q ss_pred CEEEECHHHCCCHHHHHHHHH-----CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC---C-------CCC
Q ss_conf 578822576289999999850-----5977998367778999999999999725878089951465---4-------440
Q gi|254780669|r 136 DILQIPALLCRQTDLLTAAAQ-----TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGT---S-------FGY 200 (301)
Q Consensus 136 DilQIgA~~~rqtdLl~a~a~-----t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~---~-------fgy 200 (301)
|++-|-.-+-.+...+..+.+ .+.||.. |.-.+.+ +++.+...|..-|.+. -|. + +|+
T Consensus 247 Dvivid~Ahg~s~~~~~~i~~i~~~~~~~~via--GNV~t~~----~a~~L~~~Gad~v~VG-iG~Gs~cttr~~~gvg~ 319 (491)
T 1zfj_A 247 DAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIA--GNIATAE----GARALYDAGVDVVKVG-IGPGSICTTRVVAGVGV 319 (491)
T ss_dssp SEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEE--EEECSHH----HHHHHHHTTCSEEEEC-SSCCTTBCHHHHTCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEE--EEECCHH----HHHHHHHHCCHHEEEE-EECCCCCCCCCCCCCCC
T ss_conf 879995356776325789999875357776379--9606799----9999998473122520-44032114614137688
Q ss_pred HHHCCCCCCCH----HHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 10000000106----8885187168711777421223453212638899999999997189889998
Q gi|254780669|r 201 NTLVTDMRSIP----IMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE 263 (301)
Q Consensus 201 ~~lvvD~~~i~----~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE 263 (301)
.. +.++. .-+.++.|||-|-.-.. ..+ ++ .|+|+|+|.+|+=
T Consensus 320 pq----~tai~~~a~~~~~~~v~IIADGGi~~------------sGD----i~-KAla~GAd~VMlG 365 (491)
T 1zfj_A 320 PQ----VTAIYDAAAVAREYGKTIIADGGIKY------------SGD----IV-KALAAGGNAVMLG 365 (491)
T ss_dssp CH----HHHHHHHHHHHHHTTCEEEEESCCCS------------HHH----HH-HHHHTTCSEEEES
T ss_pred CC----HHHHHHHHHHHHHCCCEEEECCCCCC------------CHH----HH-HHHHCCCCHHHHC
T ss_conf 61----64999999989864982883588475------------218----99-9987078553333
No 53
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=90.87 E-value=0.61 Score=25.66 Aligned_cols=78 Identities=13% Similarity=0.092 Sum_probs=59.3
Q ss_pred HHHHHHHHHHCCE-EEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 8999886652876-885228899998765-02157882257628999999985059779983677789999999999997
Q gi|254780669|r 105 EIFRDLKKKYGFP-ILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLH 182 (301)
Q Consensus 105 ~il~e~k~~~glp-v~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~ 182 (301)
+.+++++++|+.+ +.+++ + +.+. .-+|++-|-+-....+++..++.+.||+|++-||...+..|....++...
T Consensus 42 ~~~~~~a~~~~~~~~~~~~---~--~ll~~~~iD~V~I~tp~~~H~~~~~~al~~Gk~V~~EKP~a~~~~ea~~l~~~a~ 116 (359)
T 3m2t_A 42 ERARRVHRFISDIPVLDNV---P--AMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAAR 116 (359)
T ss_dssp HHHGGGGGTSCSCCEESSH---H--HHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEECCH---H--HHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9999999884998531899---9--9965999998998786354358999998439809998533031799999886654
Q ss_pred HCCCC
Q ss_conf 25878
Q gi|254780669|r 183 AHGAK 187 (301)
Q Consensus 183 ~~Gn~ 187 (301)
..|..
T Consensus 117 ~~~~~ 121 (359)
T 3m2t_A 117 RSDVV 121 (359)
T ss_dssp HHTCC
T ss_pred HCCCC
T ss_conf 11334
No 54
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3btu_A
Probab=90.71 E-value=0.6 Score=25.69 Aligned_cols=79 Identities=10% Similarity=0.083 Sum_probs=59.5
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCC------CEEEEECCCCCCHHHHHHHHHH
Q ss_conf 9988665287688522889999876502157882257628999999985059------7799836777899999999999
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTG------RVINVKKGQFLSPWEMHNILQK 180 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~------kpV~iKkgq~~s~~e~~~a~ek 180 (301)
.++..++|++|-.+-..+.+++- ..+-+|++-|-.-+-...++..++.+.| |+|++-|+...+.+|....++.
T Consensus 63 a~~~a~~~~~~~~~~y~~~~~ll-~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~KhV~~EKPla~~~~ea~~l~~~ 141 (438)
T 3btv_A 63 SIATIQRLKLSNATAFPTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKA 141 (438)
T ss_dssp HHHHHHHTTCTTCEEESSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCHHHHH-CCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 99999983999872069999995-59999889991987999999999998352015674599917713557788899998
Q ss_pred HHHCCC
Q ss_conf 972587
Q gi|254780669|r 181 LHAHGA 186 (301)
Q Consensus 181 i~~~Gn 186 (301)
....|.
T Consensus 142 a~~~~~ 147 (438)
T 3btv_A 142 AAERGV 147 (438)
T ss_dssp HHTTTC
T ss_pred HHHCCC
T ss_conf 761398
No 55
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=90.66 E-value=0.96 Score=24.35 Aligned_cols=74 Identities=11% Similarity=0.198 Sum_probs=57.3
Q ss_pred HHHHHHC-CEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 8866528-76885228899998765-021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 109 DLKKKYG-FPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 109 e~k~~~g-lpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
+++++|+ .++.+++. |.+. +-+|.+-|-+-+....+++.++.+.||+|++-|+...+.+|....++.....|.
T Consensus 43 ~~~~~~~~~~~~~s~~-----ell~~~~~DaV~i~tp~~~H~~~~~~al~~gk~V~~EKPla~~~~ea~~l~~~a~~~~~ 117 (358)
T 3gdo_A 43 EVKRDFPDAEVVHELE-----EITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGV 117 (358)
T ss_dssp HHHHHCTTSEEESSTH-----HHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCCEECCHH-----HHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECEEHHHHHHHHHHHHHHHHCCE
T ss_conf 9998679983539999-----99659999999988976889999999986599898612000103678999998762451
Q ss_pred C
Q ss_conf 8
Q gi|254780669|r 187 K 187 (301)
Q Consensus 187 ~ 187 (301)
.
T Consensus 118 ~ 118 (358)
T 3gdo_A 118 L 118 (358)
T ss_dssp C
T ss_pred E
T ss_conf 5
No 56
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=90.56 E-value=0.47 Score=26.38 Aligned_cols=101 Identities=14% Similarity=0.311 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CEEEEECCCHHHHHHHH-HHCC
Q ss_conf 999999999996553399706601557688666322245671248889998866528-76885228899998765-0215
Q gi|254780669|r 59 HAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYG-FPILTDVHTEQQCEAIA-DSVD 136 (301)
Q Consensus 59 ~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~g-lpv~TeV~~~~~~e~~~-~~vD 136 (301)
++...+..+.+.+ ..+-+++-++-++ .+++.++|+ .++.++ .+ |.+. +-+|
T Consensus 16 ~~~~~~~~~~~~~--~elvav~d~~~~~--------------------~~~~~~~~~~~~~~~~---~~--ell~~~~iD 68 (336)
T 2p2s_A 16 HIYDMCQQLIDAG--AELAGVFESDSDN--------------------RAKFTSLFPSVPFAAS---AE--QLITDASID 68 (336)
T ss_dssp HHHHHHHHHHHTT--CEEEEEECSCTTS--------------------CHHHHHHSTTCCBCSC---HH--HHHTCTTCC
T ss_pred HHHHHHHHHHCCC--CEEEEEECCCHHH--------------------HHHHHHHCCCCCEECC---HH--HHHCCCCCC
T ss_conf 9999998865089--7899998999999--------------------9999987799837899---99--995599989
Q ss_pred EEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 78822576289999999850597799836777899999999999972587
Q gi|254780669|r 137 ILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 137 ilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
.+-|..-+-...+++.++.+.||+|++-||...|++|....++.....|.
T Consensus 69 aV~I~tp~~~H~~~~~~al~~gk~Vl~EKPla~s~~e~~~l~~~a~~~~~ 118 (336)
T 2p2s_A 69 LIACAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGR 118 (336)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCC
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 99996882778999999998599089627853223200468999763032
No 57
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate ligand, isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=89.87 E-value=1.1 Score=23.92 Aligned_cols=159 Identities=14% Similarity=0.193 Sum_probs=87.4
Q ss_pred HHHHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHCCC------------HHHHHHHHH----CCCEEEEE--C
Q ss_conf 899988665287688522889999876502-1578822576289------------999999850----59779983--6
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLCRQ------------TDLLTAAAQ----TGRVINVK--K 165 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rq------------tdLl~a~a~----t~kpV~iK--k 165 (301)
+-|+++.+. | -|+..++|.--+..+.+. .|.++++.+-.-. .+++..+.+ +..||.+- .
T Consensus 8 ~~f~~Lh~~-~-lvlp~~~D~~SArl~e~aGf~ai~~s~~~~a~s~G~pD~~~~t~~e~~~~~~~I~~~~~~PvivD~d~ 85 (275)
T 2ze3_A 8 RSFHALHQT-G-FLLPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEA 85 (275)
T ss_dssp HHHHHHHHH-C-EEECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTT
T ss_pred HHHHHHCCC-C-CEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 999984679-9-36658889999999998699999840799999779998775889999999999986148874864688
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCC-------CCHHHH-HHCCCEEE-CHHHHHHHCCCCCC
Q ss_conf 7778999999999999725878089951465444010000000-------106888-51871687-11777421223453
Q gi|254780669|r 166 GQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMR-------SIPIMT-SMGVPVIF-DASHSVQQPGIHGN 236 (301)
Q Consensus 166 gq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~-------~i~~lk-~~~~PVi~-D~SHs~q~p~~~~~ 236 (301)
|+.-++..+...++++...|..-|.+=..+ ....+. +++.. .+...+ ..+.+.++ -=|-+.. .|....
T Consensus 86 Gyg~~~~~v~rtv~~~~~aG~agi~iEDq~-~~~~~~-l~~~~e~~~kI~a~~~a~~~~~~~~~i~ARTD~~~-~g~~~~ 162 (275)
T 2ze3_A 86 GYGHAPEDVRRTVEHFAALGVAGVNLEDAT-GLTPTE-LYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFL-KGHGAT 162 (275)
T ss_dssp CSSSSHHHHHHHHHHHHHTTCSEEEEECBC-SSSSSC-BCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTT-TTCSSS
T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEECCCC-CCCCCC-CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH-CCCCCH
T ss_conf 578579999999999998268689763866-888877-66799999999999999873588416885022553-145530
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 212638899999999997189889998369833
Q gi|254780669|r 237 CSGGERQYIVPLAKAAVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 237 ~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~ 269 (301)
...|--|. ..=+++-..+|+|++|+|...+++
T Consensus 163 ~~~g~dea-i~Ra~ay~eAGAD~ifi~~~~~~e 194 (275)
T 2ze3_A 163 DEERLAET-VRRGQAYADAGADGIFVPLALQSQ 194 (275)
T ss_dssp HHHHHHHH-HHHHHHHHHTTCSEEECTTCCCHH
T ss_pred HHHHHHHH-HHHHHHHHHCCCCEEEECCCCCHH
T ss_conf 13428999-999999997499999836889999
No 58
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=89.70 E-value=0.2 Score=28.82 Aligned_cols=167 Identities=22% Similarity=0.304 Sum_probs=85.4
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHH-CCEEEEECCC
Q ss_conf 99548634999999999999999655339970660155768866632224567124888999886-652-8768852288
Q gi|254780669|r 47 LIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLK-KKY-GFPILTDVHT 124 (301)
Q Consensus 47 iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k-~~~-glpv~TeV~~ 124 (301)
+|-|----.|.+. +.+.+...+.++.--- -+ |.+...- + +-.+|..++ ++| =||-+.-.+.
T Consensus 15 LilGTgky~s~~~---~~~ai~aSgaeivTvA-lR-------R~~~~~~---~---~~~~l~~i~~~~~~~LPNTAGc~t 77 (264)
T 1xm3_A 15 LLLGTGKYPSFDI---QKEAVAVSESDILTFA-VR-------RMNIFEA---S---QPNFLEQLDLSKYTLLPNTAGAST 77 (264)
T ss_dssp EEEECSCSSCHHH---HHHHHHHHTCSEEEEE-TT-------SSTTC-------------CTTCCGGGSEEEEECTTCSS
T ss_pred EEEECCCCCCHHH---HHHHHHHHCCCEEEEE-EE-------EECCCCC---C---CHHHHHHHHCCCEEECCCCCCCCC
T ss_conf 2787389999999---9999998699879999-97-------6537777---7---357898750068487464425578
Q ss_pred HHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEE-----ECCCCCCHHHHHHHHHHHHHCC-------CCCEEEE
Q ss_conf 999987650215788225762899999998505977998-----3677789999999999997258-------7808995
Q gi|254780669|r 125 EQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINV-----KKGQFLSPWEMHNILQKLHAHG-------AKDVLFC 192 (301)
Q Consensus 125 ~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~i-----Kkgq~~s~~e~~~a~eki~~~G-------n~~i~lc 192 (301)
.+++-.++ .|.+++..++- |-+ .|-....+.+.+.|+|.+...| +++.++|
T Consensus 78 A~EAVr~A----------------~lARE~~~t~w-IKLEVi~D~~~LlPD~~etl~Aae~Lv~eGF~VlpY~~~D~v~a 140 (264)
T 1xm3_A 78 AEEAVRIA----------------RLAKASGLCDM-IKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLA 140 (264)
T ss_dssp HHHHHHHH----------------HHHHHTTCCSS-EEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHH
T ss_pred HHHHHHHH----------------HHHHHCCCCCE-EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH
T ss_conf 99999999----------------99997449976-89995489877598847899999999978987999607898999
Q ss_pred EC------------CCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 14------------654440100000001068885-18716871177742122345321263889999999999718988
Q gi|254780669|r 193 ER------------GTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAG 259 (301)
Q Consensus 193 ER------------G~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dG 259 (301)
.| |.--|.+.=+.+..++.++.+ ...|||+|+-= |. |+-|-.|+-.|+||
T Consensus 141 krLed~Gc~avMPlgsPIGSg~Gl~n~~~l~~i~e~~~vPvIVDAGI-------------G~----pSdAa~AMElG~Da 203 (264)
T 1xm3_A 141 RKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGI-------------GS----PKDAAYAMELGADG 203 (264)
T ss_dssp HHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCC-------------CS----HHHHHHHHHTTCSE
T ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCC-------------CC----HHHHHHHHHCCCCE
T ss_conf 99997699199851340136877679899999996689888984798-------------98----88999999745889
Q ss_pred EEEEE
Q ss_conf 99983
Q gi|254780669|r 260 IFLET 264 (301)
Q Consensus 260 lfiE~ 264 (301)
+++-|
T Consensus 204 VLvNT 208 (264)
T 1xm3_A 204 VLLNT 208 (264)
T ss_dssp EEESH
T ss_pred EEECH
T ss_conf 98554
No 59
>3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=89.65 E-value=1.2 Score=23.82 Aligned_cols=77 Identities=21% Similarity=0.245 Sum_probs=60.9
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 999886652876885228899998765-0215788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-.+++.++|+++..+ +.++ .++ +-+|++-|..-.-..++++.++-+.||+|++-|+...++.|..-..+.....
T Consensus 42 ~~~~~~~~~~~~~~~---~~~~--ll~~~~iD~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~ 116 (354)
T 3db2_A 42 KREKFGKRYNCAGDA---TMEA--LLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKET 116 (354)
T ss_dssp HHHHHHHHHTCCCCS---SHHH--HHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCC---CHHH--HHCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 999999981998338---9999--95699998899879778888889999978997999668643237888888899860
Q ss_pred CCC
Q ss_conf 878
Q gi|254780669|r 185 GAK 187 (301)
Q Consensus 185 Gn~ 187 (301)
|..
T Consensus 117 ~~~ 119 (354)
T 3db2_A 117 GVK 119 (354)
T ss_dssp CCC
T ss_pred CCC
T ss_conf 776
No 60
>2vef_A Dihydropteroate synthase; antibiotic resistance, folic acid, transferase, biosynthesis, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=89.65 E-value=1.2 Score=23.81 Aligned_cols=203 Identities=18% Similarity=0.234 Sum_probs=123.5
Q ss_pred CHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH-
Q ss_conf 99999999999999655339-9706601557688666322245671248889998866528768852288999987650-
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIAD- 133 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~- 133 (301)
+.+.+++-++.+.+-|+++. +|+- ++-+-|.+.|+ .. -++--+..++.+++..++++--|-..++-++.+.+
T Consensus 31 ~~~~a~~~~~~mi~~GAdIIDIGge--STrPga~~is~---~e-E~~Rl~pvi~~l~~~~~~~iSIDT~~~~Va~~al~~ 104 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGE--STRPGSSYVEI---EE-EIQRVVPVIKAIRKESDVLISIDTWKSQVAEAALAA 104 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC--C-----CHHHH---HH-HHHHHHHHHHHHHHHCCCEEEEECSCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCE--ECCCCCCCCCH---HH-HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHC
T ss_conf 9999999999999879979998984--17999974799---99-999876799998416896499958973889999975
Q ss_pred HCCEEE-ECHHHCCCHHHHHHHHHCCCEEEEEC--------------------CCCCC---------------HHHH-HH
Q ss_conf 215788-22576289999999850597799836--------------------77789---------------9999-99
Q gi|254780669|r 134 SVDILQ-IPALLCRQTDLLTAAAQTGRVINVKK--------------------GQFLS---------------PWEM-HN 176 (301)
Q Consensus 134 ~vDilQ-IgA~~~rqtdLl~a~a~t~kpV~iKk--------------------gq~~s---------------~~e~-~~ 176 (301)
.+||+- |-++. ..-+++..+++.+.++.+-- |+-.+ ..+| ..
T Consensus 105 Ga~iINDVsg~~-~d~~m~~vva~~~~~~ilmh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~i~~f~~~ 183 (314)
T 2vef_A 105 GADLVNDITGLM-GDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFER 183 (314)
T ss_dssp TCCEEEETTTTC-SCTTHHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHH
T ss_pred CCCEEECCCCCC-CCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 973898464243-4412688998638988998356667887764212145467887654346776652099999999998
Q ss_pred HHHHHHHCCCC-CEEEEECCCCCCC---HHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCC---CCC--CC-----CH
Q ss_conf 99999725878-0899514654440---10000000106888518716871177742122345---321--26-----38
Q gi|254780669|r 177 ILQKLHAHGAK-DVLFCERGTSFGY---NTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHG---NCS--GG-----ER 242 (301)
Q Consensus 177 a~eki~~~Gn~-~i~lcERG~~fgy---~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~---~~~--gG-----~r 242 (301)
.++++...|.+ +=++..=|+-||. .|+ -=++++..++++++||.+-+|.=-..-.-.+ ... .. .|
T Consensus 184 ~~~~l~~~GI~~~~IilDPGiGFgKt~~~nl-~ll~~l~~~~~lg~PiLvG~SRKsfig~l~~~~~~~~~~~~~~~~~~R 262 (314)
T 2vef_A 184 ALARAAEAGIAPENILLDPGIGFGLTKKENL-LLLRDLDKLHQKGYPIFLGVSRKRFVINILEENGFEVNPETELGFRNR 262 (314)
T ss_dssp HHHHHHHHTCCGGGEEEECCTTSSCCHHHHH-HHHHTHHHHHTTSSCBEEECSSCHHHHHHHHHTTCCCCTTSHHHHHHH
T ss_pred HHHHHHHCCCCHHEEEECCCCCCCCCCCCCH-HHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 8889997799853698678768787740259-999779998737991699846058899885555433574222352320
Q ss_pred HHHHHHHHH--HHHHCCCEEEEEECCCHH
Q ss_conf 899999999--997189889998369833
Q gi|254780669|r 243 QYIVPLAKA--AVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 243 ~~v~~la~a--a~a~G~dGlfiE~Hp~P~ 269 (301)
. ..+++-+ |+..|++ ++-||.--+
T Consensus 263 ~-~~tlaa~~~a~~~Ga~--iiRVHDV~e 288 (314)
T 2vef_A 263 D-TASAHVTSIAARQGVE--VVRVHDVAS 288 (314)
T ss_dssp H-HHHHHHHHHHHHTTCS--EEEESCHHH
T ss_pred H-HHHHHHHHHHHHCCCC--EEEECCHHH
T ss_conf 2-9999999999987998--999389799
No 61
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655}
Probab=87.77 E-value=1.5 Score=23.00 Aligned_cols=87 Identities=13% Similarity=0.085 Sum_probs=45.3
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHC---CC----------HHHHHHHHH----CCCEEEEEC--C
Q ss_conf 9988665287688522889999876502-15788225762---89----------999999850----597799836--7
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLC---RQ----------TDLLTAAAQ----TGRVINVKK--G 166 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~---rq----------tdLl~a~a~----t~kpV~iKk--g 166 (301)
|+++=+.-+.-++..+||.-.+-.+.+. .|.+++..+-+ .. ++++..+.+ ++.||.+-= |
T Consensus 14 lr~ll~~~~~l~~~~~~D~~SAr~~e~aGf~a~~~sg~~~aa~~~G~pD~~~~~~~e~~~~~~~I~~a~~~PviaD~d~G 93 (298)
T 3eoo_A 14 FRAAVAAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTG 93 (298)
T ss_dssp HHHHHHHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTC
T ss_pred HHHHHHCCCCEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 99997289988952578999999999859999994489999983799997656667776666655303678868861677
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 7789999999999997258780899514
Q gi|254780669|r 167 QFLSPWEMHNILQKLHAHGAKDVLFCER 194 (301)
Q Consensus 167 q~~s~~e~~~a~eki~~~Gn~~i~lcER 194 (301)
+ -.+.+....++.+...|.--|.+=..
T Consensus 94 y-G~~~~v~rtv~~~~~aGvagi~IEDq 120 (298)
T 3eoo_A 94 W-GGAFNIARTIRSFIKAGVGAVHLEDQ 120 (298)
T ss_dssp S-SSHHHHHHHHHHHHHTTCSEEEEECB
T ss_pred C-CHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 7-80799999999999759967863697
No 62
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A*
Probab=87.66 E-value=1.6 Score=22.95 Aligned_cols=113 Identities=11% Similarity=0.059 Sum_probs=65.1
Q ss_pred HCCEEEECH--------HHCCCH-------------------HHHHHHHH---CCCEEEEECCC------CCCHHHHHHH
Q ss_conf 215788225--------762899-------------------99999850---59779983677------7899999999
Q gi|254780669|r 134 SVDILQIPA--------LLCRQT-------------------DLLTAAAQ---TGRVINVKKGQ------FLSPWEMHNI 177 (301)
Q Consensus 134 ~vDilQIgA--------~~~rqt-------------------dLl~a~a~---t~kpV~iKkgq------~~s~~e~~~a 177 (301)
..|.++|-+ |++..| ++++++.+ .+.||-+|=.. ..+++|.+..
T Consensus 165 GfDGVEiH~ahGyLl~qFlSp~~N~RtD~YGGs~enR~Rf~~Eii~aIr~~vg~~~~i~~R~s~~d~~~~g~~~ee~~~~ 244 (349)
T 3hgj_A 165 GFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAF 244 (349)
T ss_dssp TCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHH
T ss_pred CCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 98914605126799999058876898876787877888999999999999708997289967702146799877999999
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCHHHCCCC---CCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 999972587808995146544401000000---01068885-18716871177742122345321263889999999999
Q gi|254780669|r 178 LQKLHAHGAKDVLFCERGTSFGYNTLVTDM---RSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAV 253 (301)
Q Consensus 178 ~eki~~~Gn~~i~lcERG~~fgy~~lvvD~---~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~ 253 (301)
+..+...|..-+-+...+..........+- ......|+ ...||+.- ||.. -+..+..++
T Consensus 245 ~~~l~~~g~d~~~~s~~~~~~~~~~~~~~~~~~~~~~~ik~~~~ipvi~~---------------G~i~--~~e~ae~~l 307 (349)
T 3hgj_A 245 ARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAV---------------GLIT--TPEQAETLL 307 (349)
T ss_dssp HHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEEC---------------SSCC--CHHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE---------------CCCC--CHHHHHHHH
T ss_conf 99998759751641256421243456676433689999998759968998---------------8939--999999999
Q ss_pred HHC-CCEEEEE
Q ss_conf 718-9889998
Q gi|254780669|r 254 AIG-IAGIFLE 263 (301)
Q Consensus 254 a~G-~dGlfiE 263 (301)
+-| +|.+.+-
T Consensus 308 ~~g~~D~V~~g 318 (349)
T 3hgj_A 308 QAGSADLVLLG 318 (349)
T ss_dssp HTTSCSEEEES
T ss_pred HCCCCCHHHHH
T ss_conf 87992115988
No 63
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: MSE; 1.80A {Campylobacter jejuni} PDB: 3ler_A*
Probab=87.58 E-value=1.6 Score=22.93 Aligned_cols=57 Identities=7% Similarity=-0.003 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---CCEEEEECC
Q ss_conf 99999999999999655339970660155768866632224567124888999886652---876885228
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY---GFPILTDVH 123 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~---glpv~TeV~ 123 (301)
.++.+.+..+.+.+. +..++|=. -|+- -|--+-.+|-.++++.+.++. .+|++.-+-
T Consensus 26 D~~~l~~~i~~l~~~----Gv~gl~v~------G~tG-E~~~Ls~~Er~~l~~~~~~~~~~~~~~vi~gv~ 85 (301)
T 3m5v_A 26 DEQSYARLIKRQIEN----GIDAVVPV------GTTG-ESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG 85 (301)
T ss_dssp CHHHHHHHHHHHHHT----TCCEEECS------STTT-TGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC
T ss_pred CHHHHHHHHHHHHHC----CCCEEEEC------EECC-CHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 999999999999984----99989968------5213-576689999999999999983588763895577
No 64
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A*
Probab=87.28 E-value=1.6 Score=22.82 Aligned_cols=103 Identities=12% Similarity=0.153 Sum_probs=68.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC--HH-------HHHHH-HHHCCEEEE---------CHHHCCCHHHHHH
Q ss_conf 22245671248889998866528768852288--99-------99876-502157882---------2576289999999
Q gi|254780669|r 93 AGKRGVGLKKGREIFRDLKKKYGFPILTDVHT--EQ-------QCEAI-ADSVDILQI---------PALLCRQTDLLTA 153 (301)
Q Consensus 93 ~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~--~~-------~~e~~-~~~vDilQI---------gA~~~rqtdLl~a 153 (301)
.+|...|.+.-++.++++++..+.|++--|.- .. .++.+ .+.+|.|-+ +..++++.+.+.+
T Consensus 71 ~G~~n~g~~~~~~~~~~~~~~~~~pvi~SI~g~~~~~~~~~~~~~~~~~~~~~~~iElNiScPn~~~~~~~~~~~~~~~~ 150 (314)
T 2e6f_A 71 MGLPNLGFDFYLKYASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRT 150 (314)
T ss_dssp CCCCBSCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCHHHHHH
T ss_conf 67898699999997676541367771652206885407999999998642235579998215676775101038899999
Q ss_pred HHH-----CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 850-----597799836777899999999999972587808995146
Q gi|254780669|r 154 AAQ-----TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 154 ~a~-----t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG 195 (301)
.-+ +..||.+|-+.+.+..+...+++.+...+-..++.|-..
T Consensus 151 ~~~~v~~~~~~pv~vKl~p~~~~~~~~~~~~~~~~~~~~~~i~~~n~ 197 (314)
T 2e6f_A 151 YLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNS 197 (314)
T ss_dssp HHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCC
T ss_pred HHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 99998750030122115778877889999999874256426863154
No 65
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=86.97 E-value=0.92 Score=24.48 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=47.2
Q ss_pred HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 133 DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 133 ~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
+-+|++-|..-.....+++.++.+.||.|++-|+...+++|....++.....|.
T Consensus 149 ~~iD~V~i~tp~~~H~~~~~~al~aGkhv~~EKP~a~~~~e~~~l~~~a~~~~~ 202 (433)
T 1h6d_A 149 PKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK 202 (433)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCC
T ss_conf 998789990987999999999998799199957841233323202466765240
No 66
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=86.88 E-value=1.7 Score=22.67 Aligned_cols=151 Identities=16% Similarity=0.221 Sum_probs=75.4
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCEEEEEC---CCHHHHHHH
Q ss_conf 99999999999999655339970660155768866632224567124888999886652-87688522---889999876
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY-GFPILTDV---HTEQQCEAI 131 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~-glpv~TeV---~~~~~~e~~ 131 (301)
+.|++.-+.+...+.. .+.+--- |+...+=.|++....+.+.+.+++ .+||.--. .+.+++...
T Consensus 26 ~~e~~~avi~AAe~~~----sPvIlq~--------s~~~~~~~g~~~~~~~~~~~a~~~~~Vpv~lHLDH~~~~e~i~~a 93 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEEN----SPLFIQA--------SEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKA 93 (307)
T ss_dssp SHHHHHHHHHHHHHHT----CCEEEEE--------EHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC----CCEEEEC--------CHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 9999999999999979----9989984--------876875679899999999999756998089971787999999999
Q ss_pred HH-HCC-EEEECH-----HHCCCHHHHHHH-HHCCCEEEE----------------ECCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 50-215-788225-----762899999998-505977998----------------367778999999999999725878
Q gi|254780669|r 132 AD-SVD-ILQIPA-----LLCRQTDLLTAA-AQTGRVINV----------------KKGQFLSPWEMHNILQKLHAHGAK 187 (301)
Q Consensus 132 ~~-~vD-ilQIgA-----~~~rqtdLl~a~-a~t~kpV~i----------------Kkgq~~s~~e~~~a~eki~~~Gn~ 187 (301)
.+ ..+ |.-=++ -|.++|--+.+. .+.|..|=- +...+-+|++.. +.+..+|.
T Consensus 94 i~~GftSVMiDgS~lp~eeNi~~T~~vve~Ah~~gv~VEaElG~igg~e~~~~~~~~~~~~T~Peea~---~Fv~~Tgv- 169 (307)
T 3n9r_A 94 VKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAE---QFVKESQV- 169 (307)
T ss_dssp HHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHH---HHHHHHCC-
T ss_pred HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH---HHHHHHCC-
T ss_conf 97199868860998999999999999999982539828987412157678766555321247989999---99871088-
Q ss_pred CEEEEECCCCCC-CH---HHCCCCCCCHHHHH-HCCCEEE
Q ss_conf 089951465444-01---00000001068885-1871687
Q gi|254780669|r 188 DVLFCERGTSFG-YN---TLVTDMRSIPIMTS-MGVPVIF 222 (301)
Q Consensus 188 ~i~lcERG~~fg-y~---~lvvD~~~i~~lk~-~~~PVi~ 222 (301)
+.+.+-=|+..| |. +-..|+.-+..+++ ...|.+.
T Consensus 170 D~LAvaiGn~HG~yk~~~~p~ld~~~l~~I~~~~~vPLVl 209 (307)
T 3n9r_A 170 DYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVL 209 (307)
T ss_dssp SEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEEE
T ss_pred CEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEC
T ss_conf 7342211223367778898776899999988505886554
No 67
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=86.85 E-value=1.7 Score=22.66 Aligned_cols=97 Identities=10% Similarity=0.036 Sum_probs=54.7
Q ss_pred HHHHHHHH-CCCEEEEEC------CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCC---CCCCHHHHH-HC
Q ss_conf 99999850-597799836------77789999999999997258780899514654440100000---001068885-18
Q gi|254780669|r 149 DLLTAAAQ-TGRVINVKK------GQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTD---MRSIPIMTS-MG 217 (301)
Q Consensus 149 dLl~a~a~-t~kpV~iKk------gq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD---~~~i~~lk~-~~ 217 (301)
++++++.+ .+.|+.++= .-..+++|.+..+..+...|..-+-+..+..... ...... ..-....|+ ..
T Consensus 199 Eii~avr~~v~~~~~vri~~~~~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~ik~~~~ 277 (338)
T 1z41_A 199 EIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHA-DINVFPGYQVSFAEKIREQAD 277 (338)
T ss_dssp HHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCC-CCCCCTTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHCC
T ss_conf 9999999985467648854543457886446699999999983974000133430135-444688620789999998759
Q ss_pred CCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEE
Q ss_conf 716871177742122345321263889999999999718-9889998
Q gi|254780669|r 218 VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIG-IAGIFLE 263 (301)
Q Consensus 218 ~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G-~dGlfiE 263 (301)
.|||.- |+-++ +..|..++.-| +|.+.+-
T Consensus 278 ~pvi~~---------------G~i~~--~~~ae~~l~~g~~D~V~~g 307 (338)
T 1z41_A 278 MATGAV---------------GMITD--GSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp CEEEEC---------------SSCCS--HHHHHHHHHTTSCSEEEEC
T ss_pred CCEEEE---------------CCCCC--HHHHHHHHHCCCCCCHHHH
T ss_conf 528996---------------89499--9999999987995523865
No 68
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=86.68 E-value=1.6 Score=22.91 Aligned_cols=67 Identities=21% Similarity=0.266 Sum_probs=53.3
Q ss_pred CCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 876885228899998765-021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 115 GFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 115 glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
+.++.++. + +.++ +-+|.+=|.+-+..++++..++.+.||+|++-|+...+.+|....++-....|.
T Consensus 54 ~~~~~~~~---~--ell~~~~~D~V~I~tp~~~H~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~ 121 (315)
T 3c1a_A 54 GCVIESDW---R--SVVSAPEVEAVIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGV 121 (315)
T ss_dssp TCEEESST---H--HHHTCTTCCEEEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCH---H--HHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 79735999---9--99559999989992878887999999996132211389821114678888888764143
No 69
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=86.20 E-value=1.7 Score=22.66 Aligned_cols=72 Identities=13% Similarity=0.169 Sum_probs=52.3
Q ss_pred HHHHHC-CEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 866528-76885228899998765-021578822576289999999850597799836777899999999999972587
Q gi|254780669|r 110 LKKKYG-FPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 110 ~k~~~g-lpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
..++|+ .++.|+. + |.+. +-+|++-|..-+...++++.++-+.||+|++-||...+++|..-.++.....|.
T Consensus 44 ~~~~~~~~~~~~~~---~--ell~~~~~D~V~I~tp~~~H~~~~~~al~~gkhV~~EKP~a~~~~e~~~l~~~a~~~~~ 117 (345)
T 3f4l_A 44 QAPIYSHIHFTSDL---D--EVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGL 117 (345)
T ss_dssp GSGGGTTCEEESCT---H--HHHTCTTEEEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHCCCCCEECCH---H--HHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 99875999367999---9--99569999889995886998999999998599098434310125666543301123674
No 70
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=86.19 E-value=1.9 Score=22.44 Aligned_cols=90 Identities=11% Similarity=0.111 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHCCEEEEECC-CHHHHH-HHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 4888999886652876885228-899998-7650-215788225762899999998505977998367778999999999
Q gi|254780669|r 102 KGREIFRDLKKKYGFPILTDVH-TEQQCE-AIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNIL 178 (301)
Q Consensus 102 ~gL~il~e~k~~~glpv~TeV~-~~~~~e-~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~ 178 (301)
+.++-.++..++++.+...-.- -....+ .+.+ -+|++-|..-+-...+++.++.+.||+|++-|+...+++|....+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD~V~I~tp~~~H~~~~~~al~~g~~v~~EKP~~~~~~e~~~l~ 135 (444)
T 2ixa_A 56 YMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYV 135 (444)
T ss_dssp HHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH
T ss_conf 89999999999828963000265436699996389998899858827689999999971987774188989999999999
Q ss_pred HHHHHCCCCCEEEE
Q ss_conf 99972587808995
Q gi|254780669|r 179 QKLHAHGAKDVLFC 192 (301)
Q Consensus 179 eki~~~Gn~~i~lc 192 (301)
+.....|- .++++
T Consensus 136 ~~~~~~~~-~~~v~ 148 (444)
T 2ixa_A 136 KVSEQTGV-PLMAL 148 (444)
T ss_dssp HHHHHHCC-CEEEC
T ss_pred HHHHHHCC-CCEEC
T ss_conf 99998399-96011
No 71
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, GMP reductase domain, structural genomics; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=84.68 E-value=1.6 Score=22.91 Aligned_cols=114 Identities=16% Similarity=0.117 Sum_probs=59.1
Q ss_pred HHHHH-HHHCCEEEECHHH-----CCCH----HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 99876-5021578822576-----2899----999998505977998367778999999999999725878089951465
Q gi|254780669|r 127 QCEAI-ADSVDILQIPALL-----CRQT----DLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGT 196 (301)
Q Consensus 127 ~~e~~-~~~vDilQIgA~~-----~rqt----dLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~ 196 (301)
..+.+ ..-+|++.|-... .... ++..-...++.||.+|.- .++++ ++.+...|..-|.+---|
T Consensus 170 ~~~~~~~~g~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~vpII~~~v--~t~e~----A~~l~~aGad~I~V~g~~- 242 (393)
T 2qr6_A 170 IAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGV--NDYTT----ALHMMRTGAVGIIVGGGE- 242 (393)
T ss_dssp HHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECC--CSHHH----HHHHHTTTCSEEEESCCS-
T ss_pred HHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCEEEECC--CCHHH----HHHHHHCCCCEEEECCCC-
T ss_conf 45568754898588830100033315046899999997416986898367--69999----999997699879984666-
Q ss_pred CCCCHHH---CCCCCCCHHH----HH-------HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 4440100---0000010688----85-------18716871177742122345321263889999999999718988999
Q gi|254780669|r 197 SFGYNTL---VTDMRSIPIM----TS-------MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFL 262 (301)
Q Consensus 197 ~fgy~~l---vvD~~~i~~l----k~-------~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfi 262 (301)
..+...+ +.-+.+++.. ++ .+.|||.|---. + -.+.+ +|+++|||++|+
T Consensus 243 ~tt~~~~~~g~p~l~ai~eva~a~~~~~~~~~~~~ipVIADGGIr----------~--g~DIa-----KALAlGAdaVml 305 (393)
T 2qr6_A 243 NTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIE----------N--SGDVV-----KAIACGADAVVL 305 (393)
T ss_dssp CCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC----------S--HHHHH-----HHHHHTCSEEEE
T ss_pred CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC----------C--HHHHH-----HHHHCCCCEECC
T ss_conf 655223377662688999999999987776346886299716988----------7--38999-----999839997202
Q ss_pred EE
Q ss_conf 83
Q gi|254780669|r 263 ET 264 (301)
Q Consensus 263 E~ 264 (301)
=+
T Consensus 306 Gs 307 (393)
T 2qr6_A 306 GS 307 (393)
T ss_dssp CG
T ss_pred CC
T ss_conf 52
No 72
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=83.80 E-value=2.3 Score=21.88 Aligned_cols=68 Identities=16% Similarity=0.203 Sum_probs=54.5
Q ss_pred CCEEEEECCCHHHHHHHH-HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 876885228899998765-0215788225762899999998505977998367778999999999999725878
Q gi|254780669|r 115 GFPILTDVHTEQQCEAIA-DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAK 187 (301)
Q Consensus 115 glpv~TeV~~~~~~e~~~-~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~ 187 (301)
+.++.++. + +.++ .-+|++-|-+-.-..++++.++.+.||+|++-|+...+++|..-.++.....|..
T Consensus 52 ~~~~~~~~---~--ell~~~~iD~V~I~tp~~~H~~~~~~al~~gkhV~~EKPla~~~~e~~~l~~~a~~~g~~ 120 (364)
T 3e82_A 52 DVTVIASP---E--AAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRL 120 (364)
T ss_dssp TSEEESCH---H--HHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred CCCEECCH---H--HHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHCCEE
T ss_conf 99757999---9--995599999899828778867888899864995410287411034778999997514618
No 73
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain, alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=83.56 E-value=2.2 Score=22.01 Aligned_cols=152 Identities=17% Similarity=0.245 Sum_probs=78.1
Q ss_pred CCCCCCCHHHHHH-HHHHHH-HHCCEEEEECCCH--HH----HHHHHHH--CCEEEE----------CHHHCCCHHHHHH
Q ss_conf 2245671248889-998866-5287688522889--99----9876502--157882----------2576289999999
Q gi|254780669|r 94 GKRGVGLKKGREI-FRDLKK-KYGFPILTDVHTE--QQ----CEAIADS--VDILQI----------PALLCRQTDLLTA 153 (301)
Q Consensus 94 sfrG~Gle~gL~i-l~e~k~-~~glpv~TeV~~~--~~----~e~~~~~--vDilQI----------gA~~~rqtdLl~a 153 (301)
++...|++.-++- +...++ ..+.|++--|... .+ ++.++++ +|.+.+ +...++..+++.+
T Consensus 75 g~~~~g~~~~~~~~~~~~~~~~~~~pii~si~~~~~~~~~~~~~~~~~~~~~d~ielN~~cP~~~~~~~~~~~~~~~~~~ 154 (311)
T 1ep3_A 75 GLQNPGLEVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAA 154 (311)
T ss_dssp CCCBCCHHHHHHTHHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCHHHHHH
T ss_conf 45682178999888777775179985574156784789999999986417976673045788433302232569999999
Q ss_pred HHH-----CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC----------------CCHH---HCCCCCC
Q ss_conf 850-----597799836777899999999999972587808995146544----------------4010---0000001
Q gi|254780669|r 154 AAQ-----TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSF----------------GYNT---LVTDMRS 209 (301)
Q Consensus 154 ~a~-----t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~f----------------gy~~---lvvD~~~ 209 (301)
+-+ +++|+.+|-+.... +....++.+.+.|..-+.+..+.... ++.. .-.+++.
T Consensus 155 i~~~~~~~~~~p~~vkl~~~~~--~~~~~~~~~~~~g~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~sG~~~~~~~l~~ 232 (311)
T 1ep3_A 155 LVKACKAVSKVPLYVKLSPNVT--DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKL 232 (311)
T ss_dssp HHHHHHHHCSSCEEEEECSCSS--CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHH
T ss_pred HHHHHHHCCCCCEEECCCCCCC--CHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 9999985036870321586633--27999999998398779999732442211036674335667787887664267899
Q ss_pred CHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 068885-1871687117774212234532126388999999999971898899983
Q gi|254780669|r 210 IPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 210 i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
+..+++ ..+|||- .||-+..-- +...+.+|+|++++=+
T Consensus 233 v~~i~~~~~ipIIg---------------~GGI~s~~D--~~~~l~~GAd~V~ig~ 271 (311)
T 1ep3_A 233 IHQVAQDVDIPIIG---------------MGGVANAQD--VLEMYMAGASAVAVGT 271 (311)
T ss_dssp HHHHHTTCSSCEEE---------------CSSCCSHHH--HHHHHHHTCSEEEECT
T ss_pred HHHHHHCCCCCEEE---------------ECCCCCHHH--HHHHHHCCCCEEEECH
T ss_conf 99986335677797---------------689599999--9999981999999628
No 74
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=82.75 E-value=2.5 Score=21.62 Aligned_cols=175 Identities=19% Similarity=0.205 Sum_probs=78.8
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHH
Q ss_conf 99548634999999999999999655339970660155768866632224567124888999886652876885228899
Q gi|254780669|r 47 LIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQ 126 (301)
Q Consensus 47 iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~ 126 (301)
+|-|----.|.+. +.+.+++.+..+..--+- |.++..-.+ ...+..++.-.=||-..-.+..+
T Consensus 15 LilGTgky~s~~~---~~~ai~aSGaeiVTVAlR--------R~~~~~~~~------~~~~~~~~~~~lLPNTAGc~ta~ 77 (268)
T 2htm_A 15 LILGSGKYEDFGV---MREAIAAAKAEVVTVSVR--------RVELKAPGH------VGLLEALEGVRLLPNTAGARTAE 77 (268)
T ss_dssp EEEECSSCSCHHH---HHHHHHHTTCSEEEEEEE--------ECC-------------CHHHHTTTSEEEEBCTTCCSHH
T ss_pred EEEECCCCCCHHH---HHHHHHHHCCCEEEEEEE--------CCCCCCCCC------CCHHHCHHHEEECCCCCCCCCHH
T ss_conf 0787389999999---999999859977999872--------045778887------42012312327765025777599
Q ss_pred HHHHHH----HH--CCEEE---ECHHHC---CCHHHHHHHHHCCCEEEEECCC----CCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf 998765----02--15788---225762---8999999985059779983677----78999999999999725878089
Q gi|254780669|r 127 QCEAIA----DS--VDILQ---IPALLC---RQTDLLTAAAQTGRVINVKKGQ----FLSPWEMHNILQKLHAHGAKDVL 190 (301)
Q Consensus 127 ~~e~~~----~~--vDilQ---IgA~~~---rqtdLl~a~a~t~kpV~iKkgq----~~s~~e~~~a~eki~~~Gn~~i~ 190 (301)
++-.++ |. .|++- ||-... -++++++|+.. ++|+|+ +.+.+ ...+.++...|+.-|+
T Consensus 78 eAv~~A~laRE~~g~~~IKLEVi~D~~~L~PD~~etl~Aae~-----Lv~~GF~VlpY~~~D--~~~ak~Le~~Gc~aVM 150 (268)
T 2htm_A 78 EAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAER-----LIEEDFLVLPYMGPD--LVLAKRLAALGTATVM 150 (268)
T ss_dssp HHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHH-----HHHTTCEECCEECSC--HHHHHHHHHHTCSCBE
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHH-----HHHCCCEEEEECCCC--HHHHHHHHHCCCCEEE
T ss_conf 999999999995298758878538854679876569999999-----985896899956878--9999999876986787
Q ss_pred EEECCCCCCCHHHCCCCCCCHHH-H-H-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 95146544401000000010688-8-5-1871687117774212234532126388999999999971898899983
Q gi|254780669|r 191 FCERGTSFGYNTLVTDMRSIPIM-T-S-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 191 lcERG~~fgy~~lvvD~~~i~~l-k-~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
---..+ |.+.=+.+..++.+. + + ...|||+|.-= |. |+-|-.|+-.|+||+++-+
T Consensus 151 Pl~sPI--Gsg~Gi~n~~~l~i~i~~~~~~vPvivDAGI-------------G~----pSdAa~aMElG~DaVLvNT 208 (268)
T 2htm_A 151 PLAAPI--GSGWGVRTRALLELFAREKASLPPVVVDAGL-------------GL----PSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp EBSSST--TTCCCSTTHHHHHHHHHTTTTSSCBEEESCC-------------CS----HHHHHHHHHTTCCEEEESH
T ss_pred ECHHHH--CCCCCCCCHHHHHHHHHHHCCCCCEEEECCC-------------CC----HHHHHHHHHCCCCEEEECH
T ss_conf 324243--1576403887888999874577876863588-------------99----8999999974798999763
No 75
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=82.62 E-value=2.7 Score=21.43 Aligned_cols=77 Identities=10% Similarity=0.115 Sum_probs=30.6
Q ss_pred CEEEEECCCHHHHHHHHHH-CCEEEECHHHCCC-------------HHH---HHHHHH--CCCEEEEE--CCCCCCHHHH
Q ss_conf 7688522889999876502-1578822576289-------------999---999850--59779983--6777899999
Q gi|254780669|r 116 FPILTDVHTEQQCEAIADS-VDILQIPALLCRQ-------------TDL---LTAAAQ--TGRVINVK--KGQFLSPWEM 174 (301)
Q Consensus 116 lpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rq-------------tdL---l~a~a~--t~kpV~iK--kgq~~s~~e~ 174 (301)
+-++-.++|+-.+-.+.+. .|.+++..+-+-- +++ +..+.+ ++.||.+- .|+ -++..+
T Consensus 19 ~~~~p~v~D~~SArl~e~~Gf~a~~~sg~~~a~s~~G~PD~~~~~~~e~~~~~~~I~~a~~~~PvivD~D~Gy-G~~~~v 97 (302)
T 3fa4_A 19 FIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGY-GGPIMV 97 (302)
T ss_dssp CEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTT-SSHHHH
T ss_pred EEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC-CCHHHH
T ss_conf 6896887889999999985999999448999844679998774679999999999983267887467334578-737899
Q ss_pred HHHHHHHHHCCCCCEEEEE
Q ss_conf 9999999725878089951
Q gi|254780669|r 175 HNILQKLHAHGAKDVLFCE 193 (301)
Q Consensus 175 ~~a~eki~~~Gn~~i~lcE 193 (301)
...++.+...|.--+.+=.
T Consensus 98 ~rtv~~~~~aG~agi~IED 116 (302)
T 3fa4_A 98 ARTTEQYSRSGVAAFHIED 116 (302)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCCEEEECC
T ss_conf 9999999975883887435
No 76
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol- phosphate, lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=81.99 E-value=2.8 Score=21.28 Aligned_cols=219 Identities=12% Similarity=0.106 Sum_probs=111.4
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCC-----CCCCC-CCCCCCCHHHHHHHHHHHHHHCCEE
Q ss_conf 999548634999999999999999655339-9706601557688-----66632-2245671248889998866528768
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKAN-----RSSLA-GKRGVGLKKGREIFRDLKKKYGFPI 118 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKan-----RtS~~-sfrG~Gle~gL~il~e~k~~~glpv 118 (301)
.+.||== +.+...++++.+.+.|.++. +|.=|. -+.|- ++|-. --.|..+++.+++++++++++..|+
T Consensus 23 yi~aG~P---~~~~~~~~l~~l~~~G~D~iEiGiPfS--DP~aDGpvIq~a~~rAl~~g~~~~~~~~~~~~~~~~~~~~~ 97 (262)
T 1rd5_A 23 YITAGDP---DLATTAEALRLLDGCGADVIELGVPCS--DPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPV 97 (262)
T ss_dssp EEETTSS---CHHHHHHHHHHHHHTTCSSEEEECCCS--CCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCE
T ss_pred EEECCCC---CHHHHHHHHHHHHHCCCCEEEECCCCC--CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 9727789---978999999999975999999678877--65556772565313243567000566766543101346760
Q ss_pred EEECCC-HHH---HHHHHH-HCCEEEECHHHCC-CHHHHHHHHHCCC-EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 852288-999---987650-2157882257628-9999999850597-79983677789999999999997258780899
Q gi|254780669|r 119 LTDVHT-EQQ---CEAIAD-SVDILQIPALLCR-QTDLLTAAAQTGR-VINVKKGQFLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 119 ~TeV~~-~~~---~e~~~~-~vDilQIgA~~~r-qtdLl~a~a~t~k-pV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
+.=-.. +-. ++..++ .+|-+=||-.--. ..++..++.+.+. +|.+=-+ .++++.+. .+.+.+..=|.+
T Consensus 98 ilm~y~n~~~~~~~~~~~~~GvdGviipDlp~ee~~~~~~~~~~~~l~~I~lvaP--tt~~~ri~---~i~~~a~gfIY~ 172 (262)
T 1rd5_A 98 VLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTP--AIPEDRMK---EITKASEGFVYL 172 (262)
T ss_dssp EEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECT--TSCHHHHH---HHHHHCCSCEEE
T ss_pred EEEECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCC--CCCHHHHH---HHHCCCCCEEEE
T ss_conf 3442115621677777762582044225760566778888875104340010167--77187888---763269862786
Q ss_pred -EECCCCCCCHHHCCC-CCCCHHHHHH-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCH
Q ss_conf -514654440100000-0010688851-8716871177742122345321263889999999999718988999836983
Q gi|254780669|r 192 -CERGTSFGYNTLVTD-MRSIPIMTSM-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDP 268 (301)
Q Consensus 192 -cERG~~fgy~~lvvD-~~~i~~lk~~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P 268 (301)
.-.|+|-+.+.+..+ ...+..+|+. ..||++---=+ .++-+ +....+|+||+.+=++---
T Consensus 173 vs~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~-------------~~e~v----~~~~~~gADGvVVGSaiv~ 235 (262)
T 1rd5_A 173 VSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGIS-------------KPEHV----KQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp ECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCC-------------SHHHH----HHHHHTTCSEEEECHHHHH
T ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC-------------CHHHH----HHHHHCCCCEEEECHHHHH
T ss_conf 303464221221210278899987513688779992789-------------99999----9998549999998889999
Q ss_pred HHCCCCCCC-CCCHHHHHHHHHHHHH
Q ss_conf 347978201-8688999999999999
Q gi|254780669|r 269 DNAPSDGPN-MINIKDLPKLLSQLLA 293 (301)
Q Consensus 269 ~~AlsD~~q-~l~l~~l~~ll~~l~~ 293 (301)
- +.|+.. .=.++.+++++++++.
T Consensus 236 ~--i~~~~~~~~~~~~~~~~~~~lk~ 259 (262)
T 1rd5_A 236 Q--LGEAASPKQGLRRLEEYARGMKN 259 (262)
T ss_dssp H--HHSSSSHHHHHHHHHHHHHHHHH
T ss_pred H--HHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 9--99758888999999999999998
No 77
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=80.97 E-value=3.1 Score=21.05 Aligned_cols=177 Identities=14% Similarity=0.274 Sum_probs=87.6
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC---CHHHHHHHH
Q ss_conf 99999999999999655339970660155768866632224567124888999886652876885228---899998765
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVH---TEQQCEAIA 132 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~---~~~~~e~~~ 132 (301)
+.|++.-+.+ .......+.|.-- |+....-.|++.-..+++.+.+++++||.--.= +.+++....
T Consensus 27 ~~e~~~avi~----AAe~~~sPvIlq~--------~~~~~~~~~~~~~~~~~~~~a~~~~VPV~lHlDH~~~~e~i~~ai 94 (286)
T 1gvf_A 27 NAETIQAILE----VCSEMRSPVILAG--------TPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKV 94 (286)
T ss_dssp SHHHHHHHHH----HHHHHTCCCEEEE--------CTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHH
T ss_pred CHHHHHHHHH----HHHHHCCCEEEEC--------CHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
T ss_conf 9999999999----9999699989986--------777885678999999999998736998898765368878999986
Q ss_pred H-HCCEEEE-CH-----HHCCCH-HHHHHHHHCCCEEE----------------EECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 0-2157882-25-----762899-99999850597799----------------83677789999999999997258780
Q gi|254780669|r 133 D-SVDILQI-PA-----LLCRQT-DLLTAAAQTGRVIN----------------VKKGQFLSPWEMHNILQKLHAHGAKD 188 (301)
Q Consensus 133 ~-~vDilQI-gA-----~~~rqt-dLl~a~a~t~kpV~----------------iKkgq~~s~~e~~~a~eki~~~Gn~~ 188 (301)
+ ..+=+=| ++ -|.+.| +.++-+...|.+|= -....+-+|++ |.+.+..+|. +
T Consensus 95 ~~GftSVMiD~S~l~~eeNi~~Tk~vv~~ah~~gv~VEaElG~igg~ed~~~~~~~~~~~T~Pee---a~~Fv~~Tgv-D 170 (286)
T 1gvf_A 95 HAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQE---AKRFVELTGV-D 170 (286)
T ss_dssp HTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHH---HHHHHHHHCC-S
T ss_pred HCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHCC-C
T ss_conf 16886487648989999999999999999986424267644135677777665542135899999---9999998788-8
Q ss_pred EEEEECCCCCC-CHH-HCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 89951465444-010-0000001068885-1871687117774212234532126388999999999971898899983
Q gi|254780669|r 189 VLFCERGTSFG-YNT-LVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 189 i~lcERG~~fg-y~~-lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
.+..-=|+..| |.. -..|+.-+..+++ ...|.++ | |+ ||=-. ..-+.|+..|+.=+=+-|
T Consensus 171 ~LAvaiGt~HG~y~~~p~L~~~~l~~I~~~~~vPLVL---H-----Gg----SG~p~----e~i~~ai~~Gi~KiNi~T 233 (286)
T 1gvf_A 171 SLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVL---H-----GA----SDVPD----EFVRRTIELGVTKVNVAT 233 (286)
T ss_dssp EEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEE---C-----CC----TTCCH----HHHHHHHHTTEEEEEECH
T ss_pred EEHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEE---E-----CC----CCCCH----HHHHHHHHCCEEEEEECC
T ss_conf 2315526656665899854303566765246998674---5-----89----99976----899999976928999572
No 78
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=80.97 E-value=3.1 Score=21.05 Aligned_cols=184 Identities=17% Similarity=0.259 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--ECCCHHHHHHHHH-HCCE
Q ss_conf 999999999655339970660155768866632224567124888999886652876885--2288999987650-2157
Q gi|254780669|r 61 FMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DVHTEQQCEAIAD-SVDI 137 (301)
Q Consensus 61 ~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV~~~~~~e~~~~-~vDi 137 (301)
.+.|+.+.+.+.+.. .+.-- +. + ++ +-..-++.++++.+++.+|+.. -|...++++.+.+ .+|-
T Consensus 36 ~~~a~~~~~~g~d~i--~ivDl--~~---~-----~~-~~~~~~~~i~~i~~~~~~pi~~gGGirs~~~~~~~l~~G~~r 102 (253)
T 1h5y_A 36 VEMAVRYEEEGADEI--AILDI--TA---A-----PE-GRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADK 102 (253)
T ss_dssp HHHHHHHHHTTCSCE--EEEEC--CC---C-----TT-THHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHCCCCEE--EEEEC--CC---C-----CC-CCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCE
T ss_conf 999999998699989--99851--05---5-----23-475289999999974498569835511177677888648988
Q ss_pred EEECHHHCCCHHHHHHHHHC---CCE---EEEECC--------------CCCCHHHHHHHHHHHHHCCCCCEEEEEC---
Q ss_conf 88225762899999998505---977---998367--------------7789999999999997258780899514---
Q gi|254780669|r 138 LQIPALLCRQTDLLTAAAQT---GRV---INVKKG--------------QFLSPWEMHNILQKLHAHGAKDVLFCER--- 194 (301)
Q Consensus 138 lQIgA~~~rqtdLl~a~a~t---~kp---V~iKkg--------------q~~s~~e~~~a~eki~~~Gn~~i~lcER--- 194 (301)
+=+++....+.+++.++++. .+. +-+|++ ...++.+|. +++.+.|...++++.-
T Consensus 103 vii~s~~~~~~~~~~~~~~~~g~~~iv~siD~~~~~~~~~v~~~g~~~~~~~~~~~~~---~~~~~~g~~eii~tdI~~d 179 (253)
T 1h5y_A 103 VSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWA---KEVEELGAGEILLTSIDRD 179 (253)
T ss_dssp EEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHH---HHHHHHTCSEEEEEETTTT
T ss_pred EECCCCCEECCHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCHHHHH---HHHHHCCCCEEEEEEECCC
T ss_conf 9538603438647799998769952999999998599579999499437897899999---9998579998999745147
Q ss_pred CCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCC
Q ss_conf 654440100000001068885-1871687117774212234532126388999999999971898899983698334797
Q gi|254780669|r 195 GTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPS 273 (301)
Q Consensus 195 G~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~Als 273 (301)
|+.-|++ +..+..+.+ ...|+++ +||-+.+- .+.+ ....|++|+.+=+ |+-
T Consensus 180 Gt~~G~d-----~~~l~~i~~~~~~pii~---------------~GGv~~~~-dl~~-l~~~g~~gvivgs------al~ 231 (253)
T 1h5y_A 180 GTGLGYD-----VELIRRVADSVRIPVIA---------------SGGAGRVE-HFYE-AAAAGADAVLAAS------LFH 231 (253)
T ss_dssp TTCSCCC-----HHHHHHHHHHCSSCEEE---------------ESCCCSHH-HHHH-HHHTTCSEEEESH------HHH
T ss_pred CCCCCCC-----HHHHHHHHHHCCCCEEE---------------ECCCCCHH-HHHH-HHHCCCCEEEEHH------HHH
T ss_conf 8768768-----89999999856998899---------------75999999-9999-9978996898856------878
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 82018688999999999
Q gi|254780669|r 274 DGPNMINIKDLPKLLSQ 290 (301)
Q Consensus 274 D~~q~l~l~~l~~ll~~ 290 (301)
...+++.++++.+.+
T Consensus 232 --~~~~~~~~~k~~l~~ 246 (253)
T 1h5y_A 232 --FRVLSIAQVKRYLKE 246 (253)
T ss_dssp --TTSSCHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHH
T ss_conf --599999999999998
No 79
>1xxx_A DHDPS, dihydrodipicolinate synthase; DAPA, RV2753C, lysine biosynthesis, structural genomics, PSI protein structure initiative; 2.28A {Mycobacterium tuberculosis} SCOP: c.1.10.1
Probab=80.18 E-value=3.2 Score=20.88 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=51.5
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCH
Q ss_conf 99954863499999999999999965533997066015576886663222456712488899988665287688522889
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTE 125 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~ 125 (301)
.+|+| |+-.|-+.+.+.|+..++.|.+.. .+.=| +.|+ ++.++-.+.++++.+..++||+-
T Consensus 85 ~vi~g-v~~~s~~~~i~~a~~a~~~Gad~i--~v~~P----------~~~~-~~~~~i~~~~~~ia~~~~~pi~i----- 145 (303)
T 1xxx_A 85 RVIAG-AGTYDTAHSIRLAKACAAEGAHGL--LVVTP----------YYSK-PPQRGLQAHFTAVADATELPMLL----- 145 (303)
T ss_dssp EEEEE-CCCSCHHHHHHHHHHHHHHTCSEE--EEECC----------CSSC-CCHHHHHHHHHHHHTTCSSCEEE-----
T ss_pred CEEEE-CCCCCHHHHHHHHHHHHHHCCCEE--EEECC----------CCCC-CCHHHHHHHHHHHHHHCCCCEEE-----
T ss_conf 48984-576668999999999997169869--99457----------5789-89999999999999716998899-----
Q ss_pred HHHHHHHHHCCEEEECHHH--CCCHHHHHHHHHCCCEEEEECC
Q ss_conf 9998765021578822576--2899999998505977998367
Q gi|254780669|r 126 QQCEAIADSVDILQIPALL--CRQTDLLTAAAQTGRVINVKKG 166 (301)
Q Consensus 126 ~~~e~~~~~vDilQIgA~~--~rqtdLl~a~a~t~kpV~iKkg 166 (301)
.+.|.+. .-..+++.++++....+-+|..
T Consensus 146 ------------yn~P~~~g~~~s~~~~~~L~~~~~v~giK~s 176 (303)
T 1xxx_A 146 ------------YDIPGRSAVPIEPDTIRALASHPNIVGVKDA 176 (303)
T ss_dssp ------------EECHHHHSSCCCHHHHHHHHTSTTEEEEEEC
T ss_pred ------------EECCCCCCCCCCHHHHHHHCCCCCEEECCCC
T ss_conf ------------9787535777698999996569995124567
No 80
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase, lysine biosynthesis; 1.50A {Hahella chejuensis}
Probab=79.94 E-value=3.3 Score=20.83 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=62.7
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 69995486349999999999999996553399706601557688666322245671248889998866528768852288
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHT 124 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~ 124 (301)
..+|+|-.+ .|.+.+.+.|+..++.|.+.. +.-| |+.+ .+..++-.++++++.+..++|++-=
T Consensus 70 ~~vi~gv~~-~~~~~ai~~a~~a~~~G~d~i---~~~~---------P~~~-~~~~~~~~~~f~~i~~a~~iPi~lY--- 132 (297)
T 2rfg_A 70 VPVIAGAGS-NNPVEAVRYAQHAQQAGADAV---LCVA---------GYYN-RPSQEGLYQHFKMVHDAIDIPIIVY--- 132 (297)
T ss_dssp SCBEEECCC-SSHHHHHHHHHHHHHHTCSEE---EECC---------CTTT-CCCHHHHHHHHHHHHHHCSSCEEEE---
T ss_pred CEEEEECCC-HHHHHHHHHHHHHHHHCCCEE---ECCC---------CCCC-CCCHHHHHHHHHHHHHHCCCCEEEE---
T ss_conf 709996886-019999999999998099989---7068---------8788-9899999999999998679978999---
Q ss_pred HHHHHHHHHHCCEEEECHHHC--CCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 999987650215788225762--89999999850597799836777899999999999972587808995
Q gi|254780669|r 125 EQQCEAIADSVDILQIPALLC--RQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 125 ~~~~e~~~~~vDilQIgA~~~--rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
+.|.+.- -..+++..+++....|-+|..-....+ +. ..+...+..-.++|
T Consensus 133 --------------n~P~~~g~~l~~~~~~~L~~~~nivg~K~~~~~~~~-~~---~~~~~~~~~~~~~~ 184 (297)
T 2rfg_A 133 --------------NIPPRAVVDIKPETMARLAALPRIVGVKDATTDLAR-IS---RERMLINKPFSFLS 184 (297)
T ss_dssp --------------ECHHHHSCCCCHHHHHHHHTSTTEEEEEECSCCTTH-HH---HHHTTCCSCCEEEE
T ss_pred --------------ECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHH-HH---HHHHHCCCCCEEEE
T ss_conf --------------787414778999999998518998987068885889-99---99874168855983
No 81
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta- barrel, lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=78.80 E-value=3.6 Score=20.60 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=78.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CEEEE-ECCCHHHHHHH
Q ss_conf 49999999999999996553399706601557688666322245671248889998866528-76885-22889999876
Q gi|254780669|r 54 IESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYG-FPILT-DVHTEQQCEAI 131 (301)
Q Consensus 54 iES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~g-lpv~T-eV~~~~~~e~~ 131 (301)
+++.+++..+|+.|.+.|.+.. =-.+|.+ .+++.+++++++|+ +-+-. -|++.+|++.+
T Consensus 34 ~~~~~~a~~~a~al~~~Gi~~i----------------Eitl~tp---~a~e~i~~l~~~~p~~~iGaGTV~~~~~~~~a 94 (225)
T 1mxs_A 34 IAREEDILPLADALAAGGIRTL----------------EVTLRSQ---HGLKAIQVLREQRPELCVGAGTVLDRSMFAAV 94 (225)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEE----------------EEESSST---HHHHHHHHHHHHCTTSEEEEECCCSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEE----------------EEECCCC---HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
T ss_conf 5999999999999998799889----------------9958994---09999999997499707865303679999999
Q ss_pred HH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 50-2157882257628999999985059779983677789999999999997258780899
Q gi|254780669|r 132 AD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 132 ~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
.+ .++.+=-|. -+.++++++.+.+.|+. +=-+||.|...|.+ .|.+-+-+
T Consensus 95 ~~aGa~FivsP~---~~~~v~~~a~~~~i~~i---PGv~TpsEi~~A~~----~G~~~vK~ 145 (225)
T 1mxs_A 95 EAAGAQFVVTPG---ITEDILEAGVDSEIPLL---PGISTPSEIMMGYA----LGYRRFKL 145 (225)
T ss_dssp HHHTCSSEECSS---CCHHHHHHHHHCSSCEE---CEECSHHHHHHHHT----TTCCEEEE
T ss_pred HHCCCCEEECCC---CCHHHHHHHHHCCCCCC---CCCCCHHHHHHHHH----CCCCEEEE
T ss_conf 977998998898---95999999986599725---78699899999998----69981877
No 82
>1a53_A IGPS, indole-3-glycerolphosphate synthase; thermostable, TIM-barrel; HET: IGP; 2.00A {Sulfolobus solfataricus} SCOP: c.1.2.4 PDB: 1lbf_A* 1lbl_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 2c3z_A 3b5v_A
Probab=78.76 E-value=3.6 Score=20.59 Aligned_cols=144 Identities=18% Similarity=0.202 Sum_probs=89.0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--ECCCHHHHHHHHH-HCCEEE-ECHHHCCC--HHHHHHHHHCCCEEE
Q ss_conf 66632224567124888999886652876885--2288999987650-215788-22576289--999999850597799
Q gi|254780669|r 89 RSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DVHTEQQCEAIAD-SVDILQ-IPALLCRQ--TDLLTAAAQTGRVIN 162 (301)
Q Consensus 89 RtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV~~~~~~e~~~~-~vDilQ-IgA~~~rq--tdLl~a~a~t~kpV~ 162 (301)
=|-+..|.|. ++.|.++++.+.+||+- =|-++.|+..... .+|.+- |-+.+.+. .+|+..+-+.|--++
T Consensus 82 lTe~~~F~Gs-----~~dL~~v~~~v~~PiLrKDFIid~~QI~ea~~~GADavLLI~~~L~~~~l~~l~~~a~~lGle~L 156 (247)
T 1a53_A 82 LTEEKYFNGS-----YETLRKIASSVSIPILMKDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPL 156 (247)
T ss_dssp ECCCTTTCCC-----HHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHTTTCCCE
T ss_pred ECCCCCCCCC-----HHHHHHHHHHHCCCEEHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 6788888999-----99999999860686421012388999999999466645688874128889999999998498757
Q ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHH---CCCEEECHHHHHHHCCCCCCCCC
Q ss_conf 836777899999999999972587808995146544401000000010688851---87168711777421223453212
Q gi|254780669|r 163 VKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSM---GVPVIFDASHSVQQPGIHGNCSG 239 (301)
Q Consensus 163 iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~---~~PVi~D~SHs~q~p~~~~~~~g 239 (301)
+-=+ +.+|+..| ...|.+-|.+--|.- .++-+|......+... +..+| +- +|.
T Consensus 157 vEvh---~~~El~~a----~~~~a~iIGINnRnL----~t~~vd~~~~~~l~~~ip~~~~~I---aE--------SGI-- 212 (247)
T 1a53_A 157 IEIN---DENDLDIA----LRIGARFIGINSRDL----ETLEINKENQRKLISMIPSNVVKV---AE--------SGI-- 212 (247)
T ss_dssp EEEC---SHHHHHHH----HHTTCSEEEEESBCT----TTCCBCHHHHHHHHHHSCTTSEEE---EE--------SCC--
T ss_pred EEEC---CHHHHHHH----HHCCCCEEEEECCCH----HHCCCCHHHHHHHHHHCCCCCEEE---EE--------CCC--
T ss_conf 7737---99999999----818998498714114----320447678999996388898799---96--------479--
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 63889999999999718988999836
Q gi|254780669|r 240 GERQYIVPLAKAAVAIGIAGIFLETH 265 (301)
Q Consensus 240 G~r~~v~~la~aa~a~G~dGlfiE~H 265 (301)
..++- ++....+|+||+.|-.+
T Consensus 213 ~t~ed----~~~l~~~G~davLIGes 234 (247)
T 1a53_A 213 SERNE----IEELRKLGVNAFLIGSS 234 (247)
T ss_dssp CCHHH----HHHHHHTTCCEEEECHH
T ss_pred CCHHH----HHHHHHCCCCEEEECHH
T ss_conf 99999----99999779999998988
No 83
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=78.69 E-value=3.6 Score=20.58 Aligned_cols=61 Identities=13% Similarity=0.133 Sum_probs=30.7
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
Q ss_conf 699954863499999999999999965533997066015576886663222456712488899988665287688
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPIL 119 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~ 119 (301)
..+|+|- +-.|-+++.+.|+..++.|.+ +.+.-| |+.+ .+..++-.++++++.+..++|++
T Consensus 70 ~~vi~g~-~~~s~~~ai~~a~~a~~~Gad---~v~v~~---------P~~~-~~~~~~i~~~~~~ia~~~~~pi~ 130 (289)
T 2yxg_A 70 VQVIAGA-GSNCTEEAIELSVFAEDVGAD---AVLSIT---------PYYN-KPTQEGLRKHFGKVAESINLPIV 130 (289)
T ss_dssp SEEEEEC-CCSSHHHHHHHHHHHHHHTCS---EEEEEC---------CCSS-CCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCEEEEC-CCCCHHHHHHHHHHHHHCCCC---EEEECC---------CCCC-CCCHHHHHHHHHHHHHCCCCCEE
T ss_conf 6089736-874599999999999977999---999889---------8788-99999999999999964799889
No 84
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=78.36 E-value=3.7 Score=20.52 Aligned_cols=191 Identities=17% Similarity=0.232 Sum_probs=98.1
Q ss_pred CCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 17706835787727976997069995486349999999999999996553399706601557688666322245671248
Q gi|254780669|r 24 TNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKG 103 (301)
Q Consensus 24 ~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~g 103 (301)
.++...|++ .+|.. + +|-|----.|.+. +.+.+...+.++..- +-. |....+..+ .
T Consensus 7 ~d~~l~I~g----~~f~S--R--L~lGTgky~s~~~---~~~ai~aSgaeivTv-----AlR---R~~~~~~~~-----~ 62 (265)
T 1wv2_A 7 TDTPFVIAG----RTYGS--R--LLVGTGKYKDLDE---TRRAIEASGAEIVTV-----AVR---RTNIGQNPD-----E 62 (265)
T ss_dssp --CCEEETT----EEESC--C--EEECCSCSSSHHH---HHHHHHHSCCSEEEE-----EGG---GCCC-----------
T ss_pred CCCCEEECC----EEEEC--C--EEEECCCCCCHHH---HHHHHHHHCCCEEEE-----EEE---ECCCCCCCC-----C
T ss_conf 999869999----99785--2--6887389999999---999999859987999-----974---025667887-----1
Q ss_pred HHHHHHHHH--HHCCEEEEECCCHHHHHHH----HHH---CCEEEECHHHCCC------HHHHHHHHHCCCEEEEECCC-
Q ss_conf 889998866--5287688522889999876----502---1578822576289------99999985059779983677-
Q gi|254780669|r 104 REIFRDLKK--KYGFPILTDVHTEQQCEAI----ADS---VDILQIPALLCRQ------TDLLTAAAQTGRVINVKKGQ- 167 (301)
Q Consensus 104 L~il~e~k~--~~glpv~TeV~~~~~~e~~----~~~---vDilQIgA~~~rq------tdLl~a~a~t~kpV~iKkgq- 167 (301)
..++..++. -.-||-+.-.+..+++-.+ -|. -+++.+.---... .++++|+- +++|.|+
T Consensus 63 ~~l~d~l~~~~~~~LPNTAGc~tAeEAv~~A~lARE~~~~~~~iKLEVi~d~~~L~Pd~~etl~Aa~-----~Lvk~gF~ 137 (265)
T 1wv2_A 63 PNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAE-----QLVKDGFD 137 (265)
T ss_dssp -------CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHH-----HHHTTTCE
T ss_pred HHHHHHHCCCCEEECCCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHH-----HHHHCCCE
T ss_conf 2477763657838886668854699999999999986489856999874698778977889999999-----99978977
Q ss_pred ---CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHH
Q ss_conf ---789999999999997258780899514654440100000001068885-1871687117774212234532126388
Q gi|254780669|r 168 ---FLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQ 243 (301)
Q Consensus 168 ---~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~ 243 (301)
+.+.+ ...+.++...|+.-|+ --|.-+|.+.=+.+..++.++.+ ...|||+|.-= |.
T Consensus 138 VlpY~~dD--~~~ak~L~d~Gc~avM--PlgsPIGSg~Gi~n~~~l~~i~~~~~vpviVDAGI-------------G~-- 198 (265)
T 1wv2_A 138 VMVYTSDD--PIIARQLAEIGCIAVM--PLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGV-------------GT-- 198 (265)
T ss_dssp EEEEECSC--HHHHHHHHHSCCSEEE--ECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCC-------------CS--
T ss_pred EEECCCCC--HHHHHHHHHCCCEEEC--CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC-------------CC--
T ss_conf 96247846--9999998754963754--48321011246367789999985389529974688-------------97--
Q ss_pred HHHHHHHHHHHHCCCEEEEEE
Q ss_conf 999999999971898899983
Q gi|254780669|r 244 YIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 244 ~v~~la~aa~a~G~dGlfiE~ 264 (301)
|+-|--|+-.|+||+|+-+
T Consensus 199 --pSdAa~aMElG~DaVLvNT 217 (265)
T 1wv2_A 199 --ASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp --HHHHHHHHHHTCSEEEESH
T ss_pred --HHHHHHHHHCCCCEEEECH
T ss_conf --8899999971488898532
No 85
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=78.10 E-value=3.7 Score=20.47 Aligned_cols=62 Identities=11% Similarity=-0.075 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHCCEEEEECC
Q ss_conf 9999999999996553399706601557688666322245----67124888999886652876885228
Q gi|254780669|r 58 DHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRG----VGLKKGREIFRDLKKKYGFPILTDVH 123 (301)
Q Consensus 58 e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG----~Gle~gL~il~e~k~~~glpv~TeV~ 123 (301)
+.+.+..+.+++.|.+..|=.+|=- -+- ..|..-+.+ +-.++.+.++++++ +.||.|+-.-|
T Consensus 53 ~~a~~~l~~m~~~G~N~Vrl~~~~~-q~~--~~s~~~~~~~~~t~~de~v~~~i~~Ak-~~GLkV~L~P~ 118 (343)
T 3civ_A 53 DEARASMRALAEQPFNWVTLAFAGL-MEH--PGDPAIAYGPPVTVSDDEIASMAELAH-ALGLKVCLKPT 118 (343)
T ss_dssp HHHHHHHHHHHHSSCSEEEEEEEEE-ESS--TTCCCCBCSTTTBCCHHHHHHHHHHHH-HTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECC-CCC--CCCCCEECCCCCCCCHHHHHHHHHHHH-HCCCEEEEEEE
T ss_conf 8999999999985998899961003-589--988830036899848899999999999-76987998624
No 86
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=77.98 E-value=3.8 Score=20.44 Aligned_cols=145 Identities=11% Similarity=0.143 Sum_probs=81.5
Q ss_pred CCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE-ECCCCCC---C---C--------CCCCCCCCCC
Q ss_conf 7279769970699954863499999999999999965533997066-0155768---8---6--------6632224567
Q gi|254780669|r 35 NQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVY-KSSFDKA---N---R--------SSLAGKRGVG 99 (301)
Q Consensus 35 ~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~if-K~sfdKa---n---R--------tS~~sfrG~G 99 (301)
.+++|-| |+.+-|||+. .+.|++.. + .....|++- |..+.++ | | -.-.+|.-+|
T Consensus 43 ~Gl~~~n--Pi~~AaG~~~-~~~e~~~~----~----~~~g~Gavv~ktvt~~p~~GNp~PR~~~~~~~~iN~~G~~n~G 111 (345)
T 3oix_A 43 GSFDFDN--CLMNAAGVYC-MTREELAA----I----DHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLG 111 (345)
T ss_dssp TTEEESC--SEEECTTSSC-SSHHHHHH----H----HTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSC
T ss_pred CCEECCC--CCEECCCCCC-CCHHHHHH----H----HHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
T ss_conf 9997489--8686667888-99899986----6----7639986996366788657999876455631456404799998
Q ss_pred CHHHHHHHHHHHHHH-CCEEEEECC--CHHHHHH------HHHHCCEEEECHHHC----------CCHH----HHHHHHH
Q ss_conf 124888999886652-876885228--8999987------650215788225762----------8999----9999850
Q gi|254780669|r 100 LKKGREIFRDLKKKY-GFPILTDVH--TEQQCEA------IADSVDILQIPALLC----------RQTD----LLTAAAQ 156 (301)
Q Consensus 100 le~gL~il~e~k~~~-glpv~TeV~--~~~~~e~------~~~~vDilQIgA~~~----------rqtd----Ll~a~a~ 156 (301)
.+.-++.+++.++.. ..|++--+. .+++... .+.++|.+-|- ..| ++.+ ++.++.+
T Consensus 112 ~~~~~~~l~~~~~~~~~~~vi~si~g~~~~e~~~~~~~~~~~~~ad~iElN-iScPNt~g~~~~~~d~~~~~~il~~v~~ 190 (345)
T 3oix_A 112 INYYLDYVTELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELN-LSCPNVPGXPQIAYDFETTDQILSEVFT 190 (345)
T ss_dssp HHHHHHHHHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEE-CSCCCSTTCCCGGGCHHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE-CCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 452100013544134545611144569857888999998525878889997-3688877841001488999999999887
Q ss_pred -CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf -59779983677789999999999997258780899
Q gi|254780669|r 157 -TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 157 -t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
+.+||.+|-+.+....++..+++.....|-.-+..
T Consensus 191 ~~~~Pv~vKlsp~~~~~~~~~~~~~~~~~~~~~i~~ 226 (345)
T 3oix_A 191 YFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNC 226 (345)
T ss_dssp TCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEE
T ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE
T ss_conf 630110113677787677999999967764210111
No 87
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=76.96 E-value=4 Score=20.26 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=48.4
Q ss_pred HHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 50215788225762899999998505977998367778999999999999725878
Q gi|254780669|r 132 ADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAK 187 (301)
Q Consensus 132 ~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~ 187 (301)
.+-+|++-|..-+-..+++..++.+.++.|++-||...+++|....++.....+..
T Consensus 71 ~~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~~~~~~~~ 126 (318)
T 3oa2_A 71 ATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKR 126 (318)
T ss_dssp TTSCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE
T ss_conf 89960999859849999999999975991999457734303667899876515970
No 88
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, structural genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=76.83 E-value=4.1 Score=20.24 Aligned_cols=113 Identities=16% Similarity=0.210 Sum_probs=67.7
Q ss_pred HHHHHHH--CCEEEEECCCHHHH-HHHHHHC-----CEEEECHHHCCCHHHHHHHHHCC-CEEEEE---CCCCCCHHHHH
Q ss_conf 9886652--87688522889999-8765021-----57882257628999999985059-779983---67778999999
Q gi|254780669|r 108 RDLKKKY--GFPILTDVHTEQQC-EAIADSV-----DILQIPALLCRQTDLLTAAAQTG-RVINVK---KGQFLSPWEMH 175 (301)
Q Consensus 108 ~e~k~~~--glpv~TeV~~~~~~-e~~~~~v-----DilQIgA~~~rqtdLl~a~a~t~-kpV~iK---kgq~~s~~e~~ 175 (301)
+++.+.| +-.-+.=+..-..+ ..+.... |-+=+|++.|-.+ +.++-..| +||.+. +...++++++.
T Consensus 43 ~~~a~~~~~~~~~~~~~~sgt~al~~al~~l~~~~gdeVi~p~~t~~a~--~~ai~~~G~~pvfvDid~~~~~id~~~l~ 120 (377)
T 3ju7_A 43 QTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPAT--PLAAIWCGLEPYFIDISIDDWYMDKTVLW 120 (377)
T ss_dssp HHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHH--HHHHHHTTCEEEEECBCTTTCSBCHHHHH
T ss_pred HHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCHHHHH
T ss_conf 9999975899998999155999999999976989839999899853987--99999869979999446886772889999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEECHHHHHH
Q ss_conf 999999725878089951465444010000000106888518716871177742
Q gi|254780669|r 176 NILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFDASHSVQ 229 (301)
Q Consensus 176 ~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q 229 (301)
.++++.. +++.+.---..||+ ..|+..+..+.+.+.+||.|+.||..
T Consensus 121 ~~I~~~t----~~~~~vi~~~~~G~---~~d~~~i~~i~k~~i~vIeD~a~a~g 167 (377)
T 3ju7_A 121 DKIEELK----EEVAIVVPYATFGS---WMNLEEYEELEKKGVPVVVDAAPGFG 167 (377)
T ss_dssp HHHHHHG----GGEEEECCBCGGGB---CCCCHHHHHHHHTTCCBEEECTTCTT
T ss_pred HHHHHCC----CCEEEEEECCCCCC---CHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 9986068----73489982576788---12189999874346268743434567
No 89
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=76.82 E-value=3.2 Score=20.96 Aligned_cols=86 Identities=19% Similarity=0.207 Sum_probs=51.4
Q ss_pred CCEEEECHHHCCCHHHHHHHHHCCCEEEEEC--CCCCCHHHHHHHHHHHHHCCC-CCEEEEECCCCCCCHHHCCCCCCCH
Q ss_conf 1578822576289999999850597799836--777899999999999972587-8089951465444010000000106
Q gi|254780669|r 135 VDILQIPALLCRQTDLLTAAAQTGRVINVKK--GQFLSPWEMHNILQKLHAHGA-KDVLFCERGTSFGYNTLVTDMRSIP 211 (301)
Q Consensus 135 vDilQIgA~~~rqtdLl~a~a~t~kpV~iKk--gq~~s~~e~~~a~eki~~~Gn-~~i~lcERG~~fgy~~lvvD~~~i~ 211 (301)
|-++--|+|-.+=.++++..+. .++.++- +...++++...+.+ .... +-|.+|+=-+++|.- .|+..+.
T Consensus 86 Vlv~~~g~f~~~~~~~a~~~G~--~v~~i~~~~~~~id~~~le~al~---~~~~~k~V~l~~~~t~tG~~---~pi~~i~ 157 (392)
T 2z9v_A 86 VLNLASGVYGKGFGYWAKRYSP--HLLEIEVPYNEAIDPQAVADMLK---AHPEITVVSVCHHDTPSGTI---NPIDAIG 157 (392)
T ss_dssp EEEEESSHHHHHHHHHHHHHCS--CEEEEECCTTSCCCHHHHHHHHH---HCTTCCEEEEESEEGGGTEE---CCHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCCCHHHHHHHHH---CCCCCEEEEEECCCCCCCEE---CCHHHHH
T ss_conf 9995376178999999997198--47995168888789999999971---59995399997777667444---3678875
Q ss_pred HH-HHHCCCEEECHHHHH
Q ss_conf 88-851871687117774
Q gi|254780669|r 212 IM-TSMGVPVIFDASHSV 228 (301)
Q Consensus 212 ~l-k~~~~PVi~D~SHs~ 228 (301)
.+ ++.+.++++|.+||.
T Consensus 158 ~l~~~~g~~lvvDavss~ 175 (392)
T 2z9v_A 158 ALVSAHGAYLIVDAVSSF 175 (392)
T ss_dssp HHHHHTTCEEEEECTTTB
T ss_pred HHHHHCCCEEEEEECCCC
T ss_conf 567753973899603434
No 90
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=76.80 E-value=4.1 Score=20.23 Aligned_cols=114 Identities=13% Similarity=0.089 Sum_probs=55.2
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH--HHHHHHHHHCCEEEEECC
Q ss_conf 999548634999999999999999655339970660155768866632224567124888--999886652876885228
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGRE--IFRDLKKKYGFPILTDVH 123 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~--il~e~k~~~glpv~TeV~ 123 (301)
.+|+| ++-.|-+...+.|+..++.|.+... +. .|+.++.. .++.+. +.+.+....++|++-
T Consensus 94 pvi~G-v~~~st~eai~~a~~a~~~Gad~vl--v~----------pP~y~~~~-~~~~~~~~~~~~i~~a~~lPi~l--- 156 (344)
T 2hmc_A 94 PVIVG-TGAVNTASAVAHAVHAQKVGAKGLM--VI----------PRVLSRGS-VIAAQKAHFKAILSAAPEIPAVI--- 156 (344)
T ss_dssp CEEEE-CCCSSHHHHHHHHHHHHHHTCSEEE--EC----------CCCSSSTT-CHHHHHHHHHHHHHHSTTSCEEE---
T ss_pred CEEEE-CCCCCHHHHHHHHHHHHHCCCCEEE--CC----------CCCCCCCC-CHHHHHHHHHHHHHCCCCCCEEE---
T ss_conf 68996-7878899999999999983997454--15----------86355664-11468999888872389986688---
Q ss_pred CHHHHHHHHHHCCEEEECHHHCCC--HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 899998765021578822576289--999999850597799836777899999999999972587808995
Q gi|254780669|r 124 TEQQCEAIADSVDILQIPALLCRQ--TDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 124 ~~~~~e~~~~~vDilQIgA~~~rq--tdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
.++|.+--.. .++++.+++....+-||-. -...++....+.+...+.+=.++|
T Consensus 157 --------------Yn~P~~~~~~~~~~~~~~l~~~pnivgiKds--~g~~~~~~~~~~~~~~~~~~~v~~ 211 (344)
T 2hmc_A 157 --------------YNSPYYGFATRADLFFALRAEHKNLVGFKEF--GGPADMRYAAENITSRDDEVTLMI 211 (344)
T ss_dssp --------------EEBGGGTBCCCHHHHHHHHHHCTTEEEEEEC--SCHHHHHHHHHHTSCSSSSCEEEE
T ss_pred --------------ECCCCCCCCCCHHHHHHHHCCCCCEEEEEEC--CCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf --------------5178766667779999997258997999978--886256678999971687259973
No 91
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=76.74 E-value=4.1 Score=20.22 Aligned_cols=59 Identities=10% Similarity=0.112 Sum_probs=48.9
Q ss_pred HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 021578822576289999999850597799836777899999999999972587808995
Q gi|254780669|r 133 DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 133 ~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
.-+|.+-|.+-+-...++..++.+.||+|++-|+...+++|....++.....|.. ++++
T Consensus 64 ~~iDaV~I~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~ea~~l~~~a~~~~~~-~~v~ 122 (362)
T 3fhl_A 64 PEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLM-LSVY 122 (362)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCC-EEEE
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCC-EEEE
T ss_conf 9998899948947889999999974997510287531222111577887632522-1110
No 92
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=76.74 E-value=4.1 Score=20.22 Aligned_cols=185 Identities=19% Similarity=0.253 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--ECCCHHHHHHHHH-HCC
Q ss_conf 9999999999655339970660155768866632224567124888999886652876885--2288999987650-215
Q gi|254780669|r 60 AFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DVHTEQQCEAIAD-SVD 136 (301)
Q Consensus 60 ~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV~~~~~~e~~~~-~vD 136 (301)
-.++|+.+.+.+.+. ++=--.+.+ + . +-..-+++++++.+++++|+.. =|...++++.+.+ .+|
T Consensus 33 P~~~a~~~~~~g~de----i~ivDl~~~-~------~--~~~~~~~~i~~i~~~~~~pi~~gGGIr~~e~~~~ll~~G~~ 99 (252)
T 1ka9_F 33 PVEAARAYDEAGADE----LVFLDISAT-H------E--ERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGAD 99 (252)
T ss_dssp HHHHHHHHHHHTCSC----EEEEECCSS-T------T--CHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHCCCCE----EEEEECCCC-C------C--CCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCC
T ss_conf 999999999869998----999953254-2------3--34028999999875148745773682678887899873898
Q ss_pred EEEECHHHCCCHHHHHHHHHC-C--CE---EEE-----------ECCC---CCCHHHHHHHHHHHHHCCCCCEEEEEC--
Q ss_conf 788225762899999998505-9--77---998-----------3677---789999999999997258780899514--
Q gi|254780669|r 137 ILQIPALLCRQTDLLTAAAQT-G--RV---INV-----------KKGQ---FLSPWEMHNILQKLHAHGAKDVLFCER-- 194 (301)
Q Consensus 137 ilQIgA~~~rqtdLl~a~a~t-~--kp---V~i-----------Kkgq---~~s~~e~~~a~eki~~~Gn~~i~lcER-- 194 (301)
-+=|++-..++.+++.++++. + .. +-+ ..++ ..++.+| ++++.+.|...++++.=
T Consensus 100 kvii~S~~~~~~~~~~~~~~~~g~~~iv~~id~~~~~~~~~v~~~~~~~~t~~~~~~~---~~~~~~~g~~eiiltdi~~ 176 (252)
T 1ka9_F 100 KVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEW---AVKGVELGAGEILLTSMDR 176 (252)
T ss_dssp EEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHH---HHHHHHHTCCEEEEEETTT
T ss_pred EEEECCHHHCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCEEECCCCHHHH---HHHHHHCCCCEEEEEEECC
T ss_conf 9998842430789999999854654326899876406775899759877669779999---9999874798899986234
Q ss_pred -CCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCC
Q ss_conf -654440100000001068885-187168711777421223453212638899999999997189889998369833479
Q gi|254780669|r 195 -GTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAP 272 (301)
Q Consensus 195 -G~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~Al 272 (301)
|+.-|++ +.-+..+.+ ...|+|. +||-+.+- .+.+ +...|++|..+=+ |+
T Consensus 177 dGt~~G~d-----~~l~~~i~~~~~~pii~---------------sGGv~~~~-dl~~-l~~~g~~gvivg~------al 228 (252)
T 1ka9_F 177 DGTKEGYD-----LRLTRMVAEAVGVPVIA---------------SGGAGRME-HFLE-AFQAGAEAALAAS------VF 228 (252)
T ss_dssp TTTCSCCC-----HHHHHHHHHHCSSCEEE---------------ESCCCSHH-HHHH-HHHTTCSEEEESH------HH
T ss_pred CCCCCCCC-----HHHHHHHHHHCCCCEEE---------------ECCCCCHH-HHHH-HHHCCCCEEEEEH------HH
T ss_conf 57666741-----67999998516987999---------------77989999-9999-9978997999852------87
Q ss_pred CCCCCCCCHHHHHHHHHH
Q ss_conf 782018688999999999
Q gi|254780669|r 273 SDGPNMINIKDLPKLLSQ 290 (301)
Q Consensus 273 sD~~q~l~l~~l~~ll~~ 290 (301)
- ...+++.++.+.+++
T Consensus 229 ~--~g~i~~~~lk~~l~~ 244 (252)
T 1ka9_F 229 H--FGEIPIPKLKRYLAE 244 (252)
T ss_dssp H--TTSSCHHHHHHHHHH
T ss_pred H--CCCCCHHHHHHHHHH
T ss_conf 7--699999999999998
No 93
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=75.66 E-value=3 Score=21.08 Aligned_cols=121 Identities=17% Similarity=0.273 Sum_probs=56.8
Q ss_pred CCHHHHHHHHH-HHHHHCCEEEEE---CCCHHHHHHHHH-HCC-EEEECHH-----HCCCH-HHHHHHHHCCCEEEEE--
Q ss_conf 71248889998-866528768852---288999987650-215-7882257-----62899-9999985059779983--
Q gi|254780669|r 99 GLKKGREIFRD-LKKKYGFPILTD---VHTEQQCEAIAD-SVD-ILQIPAL-----LCRQT-DLLTAAAQTGRVINVK-- 164 (301)
Q Consensus 99 Gle~gL~il~e-~k~~~glpv~Te---V~~~~~~e~~~~-~vD-ilQIgA~-----~~rqt-dLl~a~a~t~kpV~iK-- 164 (301)
|.+.-..+... +.+..++||.-- -.+.+++....+ ..+ |.-=++. |.++| ++++-+...+..|=--
T Consensus 58 g~~~~~~~~~~~~~~~~~VPv~lHlDH~~~~e~i~~ai~~GftSVMiDgS~lp~eeNI~~Tk~vv~~Ah~~gv~VEaElG 137 (323)
T 2isw_A 58 DMIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELG 137 (323)
T ss_dssp TTHHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEES
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 97889999999999759999899799988999999999718986998388233999999999999998653871899642
Q ss_pred -----------CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC-CH---HH--CCCCCCCHHHHH-HCCCEEEC
Q ss_conf -----------67778999999999999725878089951465444-01---00--000001068885-18716871
Q gi|254780669|r 165 -----------KGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFG-YN---TL--VTDMRSIPIMTS-MGVPVIFD 223 (301)
Q Consensus 165 -----------kgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fg-y~---~l--vvD~~~i~~lk~-~~~PVi~D 223 (301)
...+-+|+| |.+.+..+|. +.+..==|+..| |. ++ -.|+--+...++ ...|.++-
T Consensus 138 ~vgg~ed~~~~~~~~T~Pee---A~~Fv~~Tgv-D~LAvaiGn~HG~yk~~~~~~~~l~~~~l~~I~~~~~~PLVlH 210 (323)
T 2isw_A 138 TLGGIEEDVQNTVQLTEPQD---AKKFVELTGV-DALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMH 210 (323)
T ss_dssp CC----------CCCCCHHH---HHHHHHHHCC-SEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEEC
T ss_pred ECCCCCCCCCCCCCCCCHHH---HHHHHHCCCC-CEEEECCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCEEEE
T ss_conf 03676767655455799899---9999861188-8442010000366778788741015999998763149876841
No 94
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase; carbon dioxide fixation, cobalamin; 2.20A {Moorella thermoacetica atcc 39073} SCOP: c.1.21.2 PDB: 2e7f_A* 2ogy_A*
Probab=75.30 E-value=4.5 Score=19.97 Aligned_cols=191 Identities=10% Similarity=0.019 Sum_probs=115.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH
Q ss_conf 4999999999999999655339-970660155768866632224567124888999886652876885228899998765
Q gi|254780669|r 54 IESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIA 132 (301)
Q Consensus 54 iES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~ 132 (301)
-++.+.+.+.|+...+.|+++. +| + -.++. ...++-.++...++...++|+.-|.-.++-++...
T Consensus 21 ~~d~~~i~~~A~~mv~~GAdiIDIg----~------g~~~~----~e~e~~~~~i~~i~~~~~~piSIDT~~~ev~~aal 86 (262)
T 1f6y_A 21 ERDPAPVQEWARRQEEGGARALDLN----V------GPAVQ----DKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGL 86 (262)
T ss_dssp HTCHHHHHHHHHHHHHHTCSEEEEB----C------C--------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEC----C------CCCCC----CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 6899999999999998799989968----9------99876----88999999999999982799512578769999999
Q ss_pred H---HCCEEEE-CHHHCCCHHHHHHHHHCCCEEEE----ECCCCCCHHHHHHHH----HHHHHCCCC-CEEEEECCCCCC
Q ss_conf 0---2157882-25762899999998505977998----367778999999999----999725878-089951465444
Q gi|254780669|r 133 D---SVDILQI-PALLCRQTDLLTAAAQTGRVINV----KKGQFLSPWEMHNIL----QKLHAHGAK-DVLFCERGTSFG 199 (301)
Q Consensus 133 ~---~vDilQI-gA~~~rqtdLl~a~a~t~kpV~i----Kkgq~~s~~e~~~a~----eki~~~Gn~-~i~lcERG~~fg 199 (301)
+ .++++-= -+.--..-.++..+.+.+-+++. .+++-.++++....+ ++..+.|-. +-++..=|+.|+
T Consensus 87 ~~~~Ga~iINDVsg~~~~~~~~~~~a~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~Ii~DP~i~~~ 166 (262)
T 1f6y_A 87 KKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLILPA 166 (262)
T ss_dssp HHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCCT
T ss_pred HHCCCCEEEECHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
T ss_conf 87269817740510311489998988745970788547888775689999999999999988439987665626541120
Q ss_pred CH---HHCCCCCCCHHHH---HHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHH-HHHHHHHHCCCEEEEEECC
Q ss_conf 01---0000000106888---518716871177742122345321263889999-9999997189889998369
Q gi|254780669|r 200 YN---TLVTDMRSIPIMT---SMGVPVIFDASHSVQQPGIHGNCSGGERQYIVP-LAKAAVAIGIAGIFLETHQ 266 (301)
Q Consensus 200 y~---~lvvD~~~i~~lk---~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~-la~aa~a~G~dGlfiE~Hp 266 (301)
-. +....+..+-.++ +.++|+.+=.|--.+- . ..|+.... .+-.|++.|.|+-++-+|.
T Consensus 167 ~~~~~~~~~~le~l~~l~~~~~~g~~~l~G~S~~s~g-------~-~~R~~l~~~~l~~Ai~~Gl~aaIvr~~d 232 (262)
T 1f6y_A 167 NVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQN-------C-QNRPLINRTFLAMAMACGLMSAIADACD 232 (262)
T ss_dssp TTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGTT-------C-SSHHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC-------C-CCHHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 3411778999999999999753799846610455578-------8-6226879999999998589973267376
No 95
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, pyridoxal-5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis S2} SCOP: c.67.1.9
Probab=74.92 E-value=4.6 Score=19.91 Aligned_cols=106 Identities=15% Similarity=0.272 Sum_probs=65.8
Q ss_pred CCHHHHHHHHHCC-CEEEEEC---C--CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCC
Q ss_conf 8999999985059-7799836---7--77899999999999972587808995146544401000000010688-85187
Q gi|254780669|r 146 RQTDLLTAAAQTG-RVINVKK---G--QFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGV 218 (301)
Q Consensus 146 rqtdLl~a~a~t~-kpV~iKk---g--q~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~ 218 (301)
-+....+++.-.| +|+.+.- + ..+++++...++++....++.-.++..-++ |.++. +-|+..|..+ ++++.
T Consensus 185 ~h~S~~kai~~~G~~~~~v~~~~~~~~~~~d~~~le~~i~~~~~~~~~~~v~~t~~~-~~~g~-~~di~~I~~l~~~~~i 262 (456)
T 2z67_A 185 SHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTF-FPPRN-SDDIVEIAKICENYDI 262 (456)
T ss_dssp CCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSC-CTTBC-CCCHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCC-CCCCE-ECCHHHHHHHHHHHCC
T ss_conf 439999999984991799875654855677999999999855144864899972476-79815-5489999999998499
Q ss_pred CEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 16871177742122345321263889999999999718988999836
Q gi|254780669|r 219 PVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETH 265 (301)
Q Consensus 219 PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~H 265 (301)
|+++|..|+.| ......... .+...|+|.+..-+|
T Consensus 263 ~livD~A~g~~-----------~~~~~~~~~-~~~~~~vD~v~~S~h 297 (456)
T 2z67_A 263 PHIINGAYAIQ-----------NNYYLEKLK-KAFKYRVDAVVSSSD 297 (456)
T ss_dssp CEEEECTTTTT-----------CHHHHHHHH-HHHTSCCSEEEEEHH
T ss_pred EEEEECCCCCC-----------CCCCCCCCC-CCCCCCCCEEEEECC
T ss_conf 79996755321-----------301365565-431368878997188
No 96
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=74.37 E-value=3.1 Score=20.99 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=87.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--ECCCHHHHHHHHHH-CCE-EEECHHHCCC--HHHHHHHHHCCCEEE
Q ss_conf 66632224567124888999886652876885--22889999876502-157-8822576289--999999850597799
Q gi|254780669|r 89 RSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DVHTEQQCEAIADS-VDI-LQIPALLCRQ--TDLLTAAAQTGRVIN 162 (301)
Q Consensus 89 RtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV~~~~~~e~~~~~-vDi-lQIgA~~~rq--tdLl~a~a~t~kpV~ 162 (301)
-|-+.-|.|. ++.|+.+++..++||+- =|-++.|+...... +|. |=|-+.|-.. .+|+..+...|--++
T Consensus 80 LTe~~~F~Gs-----~~~l~~v~~~~~~PiLrKDFIid~~QI~ea~~~GADavLLI~~~L~~~~l~~l~~~a~~lgle~L 154 (251)
T 1i4n_A 80 LTEKHYFKGD-----PAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSL 154 (251)
T ss_dssp ECCCSSSCCC-----THHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEE
T ss_pred ECCCCCCCCC-----HHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 6466768997-----88899998614662066436350999689997699899986054889999999999998299864
Q ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHH---CCCEEECHHHHHHHCCCCCCCCC
Q ss_conf 836777899999999999972587808995146544401000000010688851---87168711777421223453212
Q gi|254780669|r 163 VKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSM---GVPVIFDASHSVQQPGIHGNCSG 239 (301)
Q Consensus 163 iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~---~~PVi~D~SHs~q~p~~~~~~~g 239 (301)
+-=+ +.+|+..+++. .|..-|.+--|-- .++-+|+.....+... +..+| +-| | ..
T Consensus 155 vEvh---~~~El~~al~~---~~a~iiGINnRdL----~t~~vd~~~~~~l~~~ip~~~~~I---aES-------G--I~ 212 (251)
T 1i4n_A 155 VEVH---SREDLEKVFSV---IRPKIIGINTRDL----DTFEIKKNVLWELLPLVPDDTVVV---AES-------G--IK 212 (251)
T ss_dssp EEEC---SHHHHHHHHTT---CCCSEEEEECBCT----TTCCBCTTHHHHHGGGSCTTSEEE---EES-------C--CC
T ss_pred HHCC---CHHHHHHHHCC---CCCEEEEEECCCH----HHCCCCHHHHHHHHHHCCCCCCEE---ECC-------C--CC
T ss_conf 3108---89999988613---7772887515232----200025568999984388898189---837-------9--99
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEEE----CCCHHH
Q ss_conf 6388999999999971898899983----698334
Q gi|254780669|r 240 GERQYIVPLAKAAVAIGIAGIFLET----HQDPDN 270 (301)
Q Consensus 240 G~r~~v~~la~aa~a~G~dGlfiE~----Hp~P~~ 270 (301)
...+ +..+ ..|+||+.+=. .+||.+
T Consensus 213 s~~d-~~~l-----~~G~davLIGesLm~~~dp~~ 241 (251)
T 1i4n_A 213 DPRE-LKDL-----RGKVNAVLVGTSIMKAENPRR 241 (251)
T ss_dssp CGGG-HHHH-----TTTCSEEEECHHHHHCSSHHH
T ss_pred CHHH-HHHH-----HHCCCEEEECHHHHCCCCHHH
T ss_conf 9999-9999-----828999998868757999999
No 97
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A*
Probab=73.83 E-value=2.6 Score=21.47 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=16.6
Q ss_pred CCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCCC
Q ss_conf 77899999999999972-5878089951465444
Q gi|254780669|r 167 QFLSPWEMHNILQKLHA-HGAKDVLFCERGTSFG 199 (301)
Q Consensus 167 q~~s~~e~~~a~eki~~-~Gn~~i~lcERG~~fg 199 (301)
.+-+|+|....+++... .-+-+.+..==|++.|
T Consensus 180 ~~T~Peea~~Fv~~t~~d~tgvD~LAvaiGt~HG 213 (349)
T 3elf_A 180 LYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHG 213 (349)
T ss_dssp -CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSS
T ss_pred HCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
T ss_conf 0579999999999845666785368875156566
No 98
>3f0h_A Aminotransferase; RER070207000802, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=73.62 E-value=2.7 Score=21.42 Aligned_cols=88 Identities=13% Similarity=0.048 Sum_probs=55.8
Q ss_pred HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH
Q ss_conf 21578822576289999999850597799836777899999999999972587808995146544401000000010688
Q gi|254780669|r 134 SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM 213 (301)
Q Consensus 134 ~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l 213 (301)
-|-++--|.|-.|-.++++..+..-..+-...|...++++...+ ....-+-|++++=.++.|.- .|+..+..+
T Consensus 97 ~vlv~~~G~f~~~~~~ia~~~G~~v~~i~~~~g~~~d~e~i~~~----i~~~~k~v~~~~~~t~TG~~---~di~~I~~i 169 (376)
T 3f0h_A 97 KVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEY----DNQNFTGLLVNVDETSTAVL---YDTMMIGEF 169 (376)
T ss_dssp CEEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTT----TTSCCCEEEEESEETTTTEE---CCHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH----HCCCCCEEEEECCCCCCCCC---CCHHHHHHH
T ss_conf 89999598889999999998199744631689987798999987----25588489983467865403---773676766
Q ss_pred -HHHCCCEEECHHHHH
Q ss_conf -851871687117774
Q gi|254780669|r 214 -TSMGVPVIFDASHSV 228 (301)
Q Consensus 214 -k~~~~PVi~D~SHs~ 228 (301)
++.+.++++|.+||.
T Consensus 170 ~~~~~~~lvvD~v~s~ 185 (376)
T 3f0h_A 170 CKKNNMFFVCDCVSAF 185 (376)
T ss_dssp HHHTTCEEEEECTTTT
T ss_pred HHHCCCEEEEECCCCC
T ss_conf 6405955898654335
No 99
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, JCSG, PSI, protein structure initiative; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1
Probab=73.62 E-value=4.9 Score=19.70 Aligned_cols=24 Identities=4% Similarity=0.123 Sum_probs=10.0
Q ss_pred CHHHHHHHHHHHHHH--CCEEEEECC
Q ss_conf 124888999886652--876885228
Q gi|254780669|r 100 LKKGREIFRDLKKKY--GFPILTDVH 123 (301)
Q Consensus 100 le~gL~il~e~k~~~--glpv~TeV~ 123 (301)
.+|-..+++.+.+.. .+||+.-|.
T Consensus 64 ~~Er~~l~~~~~~~~~~~~~vi~gv~ 89 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVDGKIPVIVGAG 89 (306)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEECC
T ss_conf 99999999999985488888898468
No 100
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicusatcc 33223} PDB: 3krz_A*
Probab=72.49 E-value=5.2 Score=19.53 Aligned_cols=111 Identities=11% Similarity=0.061 Sum_probs=58.4
Q ss_pred HCCEEEECH-------------HHCCC--------------HHHHHHHHH---CCCEEEEECC------CCCCHHHHHHH
Q ss_conf 215788225-------------76289--------------999999850---5977998367------77899999999
Q gi|254780669|r 134 SVDILQIPA-------------LLCRQ--------------TDLLTAAAQ---TGRVINVKKG------QFLSPWEMHNI 177 (301)
Q Consensus 134 ~vDilQIgA-------------~~~rq--------------tdLl~a~a~---t~kpV~iKkg------q~~s~~e~~~a 177 (301)
..|.++|-+ .|-|+ .++++++.+ .+.||.++-. -..+++|+...
T Consensus 156 GfDgVEiH~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~~Eii~air~~vg~~~~i~~R~s~~~~~~~g~~~~e~~~~ 235 (343)
T 3kru_A 156 GYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEY 235 (343)
T ss_dssp TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 98889974033168998138877888776678866735889999999976741577405632510014688987999999
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCHHHCCC---CCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99997258780899514654440100000---001068885-18716871177742122345321263889999999999
Q gi|254780669|r 178 LQKLHAHGAKDVLFCERGTSFGYNTLVTD---MRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAV 253 (301)
Q Consensus 178 ~eki~~~Gn~~i~lcERG~~fgy~~lvvD---~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~ 253 (301)
+..+...+. .+...-.|. .....-... ..-....|+ ...||+.- ||-. -+..|..++
T Consensus 236 ~~~l~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ik~~~~~pvi~~---------------G~i~--~~e~ae~~l 296 (343)
T 3kru_A 236 INMIKDKVD-LIDVSSGGL-LNVDINLYPGYQVKYAETIKKRCNIKTSAV---------------GLIT--TQELAEEIL 296 (343)
T ss_dssp HHHHTTTCS-EEEEECCCS-SCCCCCCCTTTTHHHHHHHHHHHTCEEEEE---------------SSCC--CHHHHHHHH
T ss_pred HHHHHHHCC-CEEECCCCC-CCCCCCCCCCCCHHHHHHHHHHCCCCEEEE---------------CCCC--CHHHHHHHH
T ss_conf 999886344-302202555-455557775321679999999749888998---------------9949--999999999
Q ss_pred HHC-CCEEEEE
Q ss_conf 718-9889998
Q gi|254780669|r 254 AIG-IAGIFLE 263 (301)
Q Consensus 254 a~G-~dGlfiE 263 (301)
+.| +|.+.+-
T Consensus 297 ~~g~~DlV~~g 307 (343)
T 3kru_A 297 SNERADLVALG 307 (343)
T ss_dssp HTTSCSEEEES
T ss_pred HCCCCEEHHHH
T ss_conf 87992126863
No 101
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural genomics, joint center for structural genomics, JCSG; 2.18A {Thermotoga maritima MSB8} SCOP: c.1.5.1
Probab=72.40 E-value=5.2 Score=19.52 Aligned_cols=143 Identities=20% Similarity=0.286 Sum_probs=75.4
Q ss_pred CCCCHHHHHHHHHHHHHHCCEEEEE-----------------------------------C--C--CHHHHHHH-HHHCC
Q ss_conf 5671248889998866528768852-----------------------------------2--8--89999876-50215
Q gi|254780669|r 97 GVGLKKGREIFRDLKKKYGFPILTD-----------------------------------V--H--TEQQCEAI-ADSVD 136 (301)
Q Consensus 97 G~Gle~gL~il~e~k~~~glpv~Te-----------------------------------V--~--~~~~~e~~-~~~vD 136 (301)
+..++++.++|.+-|.+ -+||+.+ | . +.+-++.+ ...+|
T Consensus 173 ~~s~~eA~~lm~e~kie-~lPVVd~~g~LvGLiT~kDi~k~~~~p~a~~D~~grL~VgAAVg~~~~~~eRa~~Lv~aGvD 251 (494)
T 1vrd_A 173 DISLEKAKEILHQHRIE-KLPLVSKDNKLVGLITIKDIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVD 251 (494)
T ss_dssp -------------------------------------CHHHHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHCCCC-CEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCC
T ss_conf 78999999999753546-11288688978778872653553418744427779889999977782028999999976998
Q ss_pred EEEECHHHCCCH---HHHHHHHHC--CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--C-------CCCHH
Q ss_conf 788225762899---999998505--977998367778999999999999725878089951465--4-------44010
Q gi|254780669|r 137 ILQIPALLCRQT---DLLTAAAQT--GRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGT--S-------FGYNT 202 (301)
Q Consensus 137 ilQIgA~~~rqt---dLl~a~a~t--~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~--~-------fgy~~ 202 (301)
++-|=.-+-.+- +.++.+-.. +.||.. |-..+.+ +++.+...|...|.++==+- + +|+..
T Consensus 252 ~ivID~Ahghs~~~~~~i~~ik~~~~~~~via--Gnv~t~~----~a~~L~~aGad~i~VGiG~Gs~CtTr~~~g~g~pq 325 (494)
T 1vrd_A 252 VIVIDTAHGHSRRVIETLEMIKADYPDLPVVA--GNVATPE----GTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQ 325 (494)
T ss_dssp EEEECCSCCSSHHHHHHHHHHHHHCTTSCEEE--EEECSHH----HHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEE--EEECCHH----HHHHHHHHCCCEEEECCCCCCCCCCCCEECCCCHH
T ss_conf 99995466437999999999998689986797--5324299----99999983988888541178662262300446217
Q ss_pred HCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 0000001068885187168711777421223453212638899999999997189889998
Q gi|254780669|r 203 LVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE 263 (301)
Q Consensus 203 lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE 263 (301)
+-.=+......++++.|||.|--... ..+. + .|+|+|+|.+|+=
T Consensus 326 ~sav~~~~~~~~~~~v~iiADGGi~~------------~gdi----~-KAla~GAd~VMlG 369 (494)
T 1vrd_A 326 LTAVMECSEVARKYDVPIIADGGIRY------------SGDI----V-KALAAGAESVMVG 369 (494)
T ss_dssp HHHHHHHHHHHHTTTCCEEEESCCCS------------HHHH----H-HHHHTTCSEEEES
T ss_pred HHHHHHHHHHHHHCCCEEEECCCCCC------------CCHH----H-HHHHHCCCHHHHC
T ss_conf 88999999998655966993488576------------6669----9-9987277662333
No 102
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=72.37 E-value=5.2 Score=19.51 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCEEEE-ECCCHHHHHHHH
Q ss_conf 999999999999999655339970660155768866632224567124888999886652-876885-228899998765
Q gi|254780669|r 55 ESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY-GFPILT-DVHTEQQCEAIA 132 (301)
Q Consensus 55 ES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~-glpv~T-eV~~~~~~e~~~ 132 (301)
++.+.+..+++.+.+.|.+.. . -.+|.+ .+++.+++++++| ++-+-. -|.+.+|++.+.
T Consensus 26 ~~~~~~~~~~~al~~~Gi~~i---------E-------ITl~t~---~a~~~i~~l~~~~p~~~vGaGTVl~~~~~~~a~ 86 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVA---------E-------ITFRSE---AAADAIRLLRANRPDFLIAAGTVLTAEQVVLAK 86 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEE---------E-------EETTST---THHHHHHHHHHHCTTCEEEEESCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEE---------E-------EECCCC---HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
T ss_conf 999999999999998799889---------9-------968980---399999999986899189620204579999999
Q ss_pred H-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 0-2157882257628999999985059779983677789999999999997258780899
Q gi|254780669|r 133 D-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 133 ~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
+ .++.+=-|. -+.++++.+-+.+.|+. +=.+||.|...|.++ |.+-+-+
T Consensus 87 ~aGA~FivSP~---~~~~v~~~a~~~~i~~i---PG~~TpsEi~~A~~~----G~~~vKl 136 (224)
T 1vhc_A 87 SSGADFVVTPG---LNPKIVKLCQDLNFPIT---PGVNNPMAIEIALEM----GISAVKF 136 (224)
T ss_dssp HHTCSEEECSS---CCHHHHHHHHHTTCCEE---CEECSHHHHHHHHHT----TCCEEEE
T ss_pred HHCCCEEECCC---CCHHHHHHHHHCCCCCC---CCCCCHHHHHHHHHC----CCCEEEE
T ss_conf 83799897278---99999999985699845---885887999999985----9996887
No 103
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=71.36 E-value=5.5 Score=19.37 Aligned_cols=109 Identities=18% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCEEEE-ECCCHHHHHHH
Q ss_conf 4999999999999999655339970660155768866632224567124888999886652-876885-22889999876
Q gi|254780669|r 54 IESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY-GFPILT-DVHTEQQCEAI 131 (301)
Q Consensus 54 iES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~-glpv~T-eV~~~~~~e~~ 131 (301)
.++.|++..+++.|.+.|.+.. . -.+|.+ .+++.+++++++| ++-+-. -|++.+|++.+
T Consensus 24 ~~~~~~a~~i~~al~~~Gi~~i---------E-------Itl~tp---~a~~~i~~l~~~~p~~~iGaGTV~~~e~~~~a 84 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVL---------N-------VTLRTE---CAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEV 84 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEE---------E-------EESCST---THHHHHHHHHHHCTTSEEEEESCCSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEE---------E-------EECCCH---HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
T ss_conf 8999999999999998799889---------9-------937986---79999999998789967952454536899999
Q ss_pred HH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 50-2157882257628999999985059779983677789999999999997258780899
Q gi|254780669|r 132 AD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 132 ~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
.+ .++.+=-|. -+.++++.+.+.+.|+. +=.+||.|...|.+ .|.+-+-+
T Consensus 85 ~~aGa~FivsP~---~~~~v~~~a~~~~i~~i---PGv~TpsEi~~A~~----~G~~~vK~ 135 (214)
T 1wbh_A 85 TEAGAQFAISPG---LTEPLLKAATEGTIPLI---PGISTVSELMLGMD----YGLKEFKF 135 (214)
T ss_dssp HHHTCSCEEESS---CCHHHHHHHHHSSSCEE---EEESSHHHHHHHHH----TTCCEEEE
T ss_pred HHCCCCEEECCC---CCHHHHHHHHHCCCCCC---CCCCCHHHHHHHHH----CCCCEEEE
T ss_conf 981998998589---99999999985499753---78498899999998----59995997
No 104
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=70.73 E-value=5.7 Score=19.28 Aligned_cols=113 Identities=12% Similarity=0.035 Sum_probs=66.2
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 69995486349999999999999996553399706601557688666322245671248889998866528768852288
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHT 124 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~ 124 (301)
..+|+|- +-.|.+...+.|+..++.|.+. .+.-| |+.|+ +.-++-.++++++.+..++|++-
T Consensus 74 ~~vi~gv-~~~~~~~~i~la~~a~~~Gad~---v~~~p---------P~~~~-~~~~~~~~~~~~ia~~~~~pi~i---- 135 (293)
T 1f6k_A 74 IALIAQV-GSVNLKEAVELGKYATELGYDC---LSAVT---------PFYYK-FSFPEIKHYYDTIIAETGSNMIV---- 135 (293)
T ss_dssp SEEEEEC-CCSCHHHHHHHHHHHHHHTCSE---EEEEC---------CCSSC-CCHHHHHHHHHHHHHHHCCCEEE----
T ss_pred CEEEEEC-CCCCHHHHHHHHHHHHHCCCCE---EEECC---------CCCCC-CCCHHHHHHHHHHHHCCCCEEEE----
T ss_conf 4299835-7677999999999999759997---77258---------51123-24199999999985058862788----
Q ss_pred HHHHHHHHHHCCEEEECHHH--CCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 99998765021578822576--289999999850597799836777899999999999972587808995
Q gi|254780669|r 125 EQQCEAIADSVDILQIPALL--CRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 125 ~~~~e~~~~~vDilQIgA~~--~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
.++|.+. .-..+++.++++....+-+|-.-. ++..+.. .....++..++.+
T Consensus 136 -------------Yn~P~~~g~~l~~~~l~~L~~~~~v~giK~~~~-~~~~~~~---~~~~~~~~~v~~g 188 (293)
T 1f6k_A 136 -------------YSIPFLTGVNMGIEQFGELYKNPKVLGVKFTAG-DFYLLER---LKKAYPNHLIWAG 188 (293)
T ss_dssp -------------EECHHHHCCCCCHHHHHHHHTSTTEEEEEECSC-CHHHHHH---HHHHCTTSEEEEC
T ss_pred -------------EECCCCCCCCCCHHHHHHHHHHCCCEEEEECCC-CHHHHHH---HHHHCCCEEEEEC
T ss_conf -------------605410178886899999986358518996788-6999999---9984898489758
No 105
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=70.49 E-value=4.5 Score=19.93 Aligned_cols=57 Identities=21% Similarity=0.208 Sum_probs=28.5
Q ss_pred EEEECHHHCCC--HHHHHHHHHCCCEEEEEC---------CCCCCHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 78822576289--999999850597799836---------7778999999999999725878089951
Q gi|254780669|r 137 ILQIPALLCRQ--TDLLTAAAQTGRVINVKK---------GQFLSPWEMHNILQKLHAHGAKDVLFCE 193 (301)
Q Consensus 137 ilQIgA~~~rq--tdLl~a~a~t~kpV~iKk---------gq~~s~~e~~~a~eki~~~Gn~~i~lcE 193 (301)
.+|+|||--+. ..++..+...|.+..+.+ |.|.+.++...+.+++...|.+-+++.+
T Consensus 11 ~VQvgaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yrV~vGpf~~~~~A~~~~~~lk~~g~~~~iv~~ 78 (79)
T 1x60_A 11 KVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKNAGFDAIVILE 78 (79)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHTSCCEEEEE
T ss_pred EEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99999808999999999999865996399855833999996769999999999999983997099972
No 106
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2- propyl-3-methylmalate lyase; 2.70A {Dianthus caryophyllus}
Probab=69.60 E-value=6 Score=19.12 Aligned_cols=169 Identities=15% Similarity=0.196 Sum_probs=97.1
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHC------CC-------HHHHHHHHH-----CCCEEEEEC-
Q ss_conf 99988665287688522889999876502-15788225762------89-------999999850-----597799836-
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLC------RQ-------TDLLTAAAQ-----TGRVINVKK- 165 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~------rq-------tdLl~a~a~-----t~kpV~iKk- 165 (301)
-|+++=+.-+.-++-.++|+-.+-.+.+. .+.+++..+-+ .- ++++..+.+ +..||.+-=
T Consensus 30 ~lr~ll~~~~~l~lp~~~D~~SAr~~e~aGf~ai~~ss~~~aas~lG~PD~~~~~~~e~~~~~~~I~~~~~~~PvivD~D 109 (318)
T 1zlp_A 30 TMHRLIEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGD 109 (318)
T ss_dssp HHHHHHHHSSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECT
T ss_pred HHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECC
T ss_conf 99999708998895078789999999982999996108999966679998887889999999998642367888536325
Q ss_pred -CCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CCCCHH--HCCCCC----CCHHHH--HHCCC-EE---ECHHHHHHH
Q ss_conf -7778999999999999725878089951465--444010--000000----106888--51871-68---711777421
Q gi|254780669|r 166 -GQFLSPWEMHNILQKLHAHGAKDVLFCERGT--SFGYNT--LVTDMR----SIPIMT--SMGVP-VI---FDASHSVQQ 230 (301)
Q Consensus 166 -gq~~s~~e~~~a~eki~~~Gn~~i~lcERG~--~fgy~~--lvvD~~----~i~~lk--~~~~P-Vi---~D~SHs~q~ 230 (301)
| |-.+.++...++.+...|.--|.+=..-. ..|+.. .+.+.. -+-..+ +.+-+ +| .|.-+.
T Consensus 110 ~G-~G~~~~v~~~v~~~~~aG~aGi~IEDq~~pk~~g~~~~~~~~~~~e~~~ki~aa~~a~~~~d~~IiARTDa~~~--- 185 (318)
T 1zlp_A 110 TG-GGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAP--- 185 (318)
T ss_dssp TC-SSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHH---
T ss_pred CC-CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHC---
T ss_conf 68-87178999999999982565256531126765676543223668999999986787627987078853223213---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHC--C---CCCC-----------CCCCHHHHHHH
Q ss_conf 22345321263889999999999718988999836983347--9---7820-----------18688999999
Q gi|254780669|r 231 PGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNA--P---SDGP-----------NMINIKDLPKL 287 (301)
Q Consensus 231 p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~A--l---sD~~-----------q~l~l~~l~~l 287 (301)
.|--+-+ .=+++-..+|+|++|++.=.+++.. + .+++ ..++.++|.++
T Consensus 186 --------~gl~eai-~Ra~aY~eAGAD~ifi~g~~~~~~i~~~~~~~~~p~~~~~~~g~~~p~ls~~eL~~l 249 (318)
T 1zlp_A 186 --------HGLEEGI-RRANLYKEAGADATFVEAPANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKEM 249 (318)
T ss_dssp --------HHHHHHH-HHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHHHH
T ss_pred --------CCCHHHH-HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHC
T ss_conf --------6818899-999999980898885367899999999999758983352379999853339999967
No 107
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=69.35 E-value=6.1 Score=19.09 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=77.3
Q ss_pred CCEEEEECCCHHHHHHHHHH-CCEEEECHHHC-------------CCHHHHHHHHH------CCCEEEEE--CCCCCCHH
Q ss_conf 87688522889999876502-15788225762-------------89999999850------59779983--67778999
Q gi|254780669|r 115 GFPILTDVHTEQQCEAIADS-VDILQIPALLC-------------RQTDLLTAAAQ------TGRVINVK--KGQFLSPW 172 (301)
Q Consensus 115 glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~-------------rqtdLl~a~a~------t~kpV~iK--kgq~~s~~ 172 (301)
.+-++-.+||+-.+..+.+. .|.+++..+-+ ..++++..+.+ .+.||.+- .|+ -++.
T Consensus 25 ~~~~~p~~~D~lSAr~~e~aGf~ai~~sg~~~aas~lG~PD~~~~~~~e~~~~~~~i~~~~~~~iPviaD~d~Gy-G~~~ 103 (307)
T 3lye_A 25 ELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGY-GGPI 103 (307)
T ss_dssp CCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCS-SSHH
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCC-CCHH
T ss_conf 869947888889999999839999997669998665499987744158999999998840266888798833467-7589
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCC--CCCC---HHHCC--C----CCCCHH-HHHHCC-CEE---ECHHHHHHHCCCCCC
Q ss_conf 999999999725878089951465--4440---10000--0----001068-885187-168---711777421223453
Q gi|254780669|r 173 EMHNILQKLHAHGAKDVLFCERGT--SFGY---NTLVT--D----MRSIPI-MTSMGV-PVI---FDASHSVQQPGIHGN 236 (301)
Q Consensus 173 e~~~a~eki~~~Gn~~i~lcERG~--~fgy---~~lvv--D----~~~i~~-lk~~~~-PVi---~D~SHs~q~p~~~~~ 236 (301)
++...++.+...|.--|.+=..-. ..++ ..++. + +++... .++.+- -+| .|+-+.
T Consensus 104 ~v~~tv~~~~~aGaagi~IEDq~~~k~~~~~~~~~l~~~ee~~~kikAa~~~~~~~~~d~~IiARTDa~~~--------- 174 (307)
T 3lye_A 104 MVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQS--------- 174 (307)
T ss_dssp HHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHH---------
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---------
T ss_conf 99999999997699678732442676578764324589999999999899887336987289971364333---------
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 212638899999999997189889998369833
Q gi|254780669|r 237 CSGGERQYIVPLAKAAVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 237 ~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~ 269 (301)
.|--|-+. =+++-..+|+|++|+|.-.+++
T Consensus 175 --~g~deAI~-Ra~aY~~AGAD~ifi~g~~s~e 204 (307)
T 3lye_A 175 --LGYEECIE-RLRAARDEGADVGLLEGFRSKE 204 (307)
T ss_dssp --HCHHHHHH-HHHHHHHTTCSEEEECCCSCHH
T ss_pred --CCHHHHHH-HHHHHHHCCCCEEEECCCCCHH
T ss_conf --57189999-9996376399998625889999
No 108
>1d3g_A Dihydroorotate dehydrogenase; protein-antiproliferative agent complex, oxidoreductase; HET: BRE FMN ORO DDQ; 1.60A {Homo sapiens} SCOP: c.1.4.1 PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* 3kvm_A* 2b0m_A* 1uum_A* ...
Probab=69.23 E-value=6.1 Score=19.07 Aligned_cols=147 Identities=17% Similarity=0.172 Sum_probs=84.0
Q ss_pred CEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC--C--------------CCCCCCC
Q ss_conf 27976997069995486349999999999999996553399706601557688666--3--------------2224567
Q gi|254780669|r 36 QVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSS--L--------------AGKRGVG 99 (301)
Q Consensus 36 ~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS--~--------------~sfrG~G 99 (301)
+++|-| |+.+=|||+. +.+++ +.+.+.|. =..+.|+.+.++.... | .+|...|
T Consensus 56 Gl~~~n--Pi~lASG~~~--~~~~i----~~~~~~G~---G~vv~kTit~~~~~gn~~p~~~~~~~~~~~~n~~g~~~~g 124 (367)
T 1d3g_A 56 GHKFRN--PVGIAAGFDK--HGEAV----DGLYKMGF---GFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHG 124 (367)
T ss_dssp TEEESS--SEEECTTSST--TSSSH----HHHHHHTC---SEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCC
T ss_pred CEECCC--CCEECCCCCC--CHHHH----HHHHCCCC---CEEEECCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCH
T ss_conf 986699--8578978898--89999----99765862---1899682247742678987503455430012014646620
Q ss_pred CHHHHHHHHHHH------HHHCCEEEEECCC--------HHHH---HHHHHHCCEEEECHHHCCCH---------H----
Q ss_conf 124888999886------6528768852288--------9999---87650215788225762899---------9----
Q gi|254780669|r 100 LKKGREIFRDLK------KKYGFPILTDVHT--------EQQC---EAIADSVDILQIPALLCRQT---------D---- 149 (301)
Q Consensus 100 le~gL~il~e~k------~~~glpv~TeV~~--------~~~~---e~~~~~vDilQIgA~~~rqt---------d---- 149 (301)
.+.-++.+.... .+.++|+..-|.. .+.. .....++|.+.+. +.|-|+ +
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~pv~~sI~~~~~~~~~~~~~~~~~~~~~~~ad~lelN-~S~pn~~~~~~~~~~~~~~~ 203 (367)
T 1d3g_A 125 LSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVN-VSSPNTAGLRSLQGKAELRR 203 (367)
T ss_dssp HHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEE-SCCTTSTTC----CHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCHHHHH
T ss_conf 89999878887652033244687289997157673779999999999863215512334-35676212433457403789
Q ss_pred H----HHHHH----HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 9----99985----059779983677789999999999997258780899514
Q gi|254780669|r 150 L----LTAAA----QTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCER 194 (301)
Q Consensus 150 L----l~a~a----~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcER 194 (301)
+ ++... ...+||.+|-+...+..+...+++.+...|...++++-.
T Consensus 204 ~~~~~~~~~~~~~~~~~~Pv~vKlsP~~~~~~i~~~~~~~~~~g~~gv~~~n~ 256 (367)
T 1d3g_A 204 LLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNT 256 (367)
T ss_dssp HHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECC
T ss_conf 99999998753202357752135687641144554566665410225876334
No 109
>3ffr_A Phosphoserine aminotransferase SERC; YP_677612.1, structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=69.02 E-value=4.5 Score=19.97 Aligned_cols=87 Identities=13% Similarity=0.060 Sum_probs=48.3
Q ss_pred HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHH
Q ss_conf 02157882257628999999985059779983677789999999999997258780899514654440100000001068
Q gi|254780669|r 133 DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPI 212 (301)
Q Consensus 133 ~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~ 212 (301)
+-++++-.|+|--+-.++.+..+..-..+...-|....++++. .+..-+-|.+|+--++.|.-+ |+..|..
T Consensus 84 ~~~~~i~~g~~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~v~~~h~~t~tG~~~---pi~~I~~ 154 (362)
T 3ffr_A 84 KKSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT------VPADAEIICLTHNETSSGVSM---PVEDINT 154 (362)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC------CCTTCCEEEEESEETTTTEEC---CHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHH------CCCCCCEEEEECCCCCCCEEE---CHHHHHH
T ss_conf 5505884681378999999751850048626767546876752------377876588853458765463---3154411
Q ss_pred HH-H-HCCCEEECHHHHH
Q ss_conf 88-5-1871687117774
Q gi|254780669|r 213 MT-S-MGVPVIFDASHSV 228 (301)
Q Consensus 213 lk-~-~~~PVi~D~SHs~ 228 (301)
+. + .+.++++|++.|+
T Consensus 155 ~~~k~~~~l~~vDa~qs~ 172 (362)
T 3ffr_A 155 FRDKNKDALIFVDAVSSL 172 (362)
T ss_dssp SGGGSTTSEEEEECTTTT
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 110257824752565443
No 110
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A*
Probab=68.22 E-value=6.4 Score=18.93 Aligned_cols=66 Identities=14% Similarity=0.180 Sum_probs=48.6
Q ss_pred HHHHHHCCEEEECHHHCCCH-------------HHHHHHHH----------------------CCCEEEEECCCCCCHHH
Q ss_conf 87650215788225762899-------------99999850----------------------59779983677789999
Q gi|254780669|r 129 EAIADSVDILQIPALLCRQT-------------DLLTAAAQ----------------------TGRVINVKKGQFLSPWE 173 (301)
Q Consensus 129 e~~~~~vDilQIgA~~~rqt-------------dLl~a~a~----------------------t~kpV~iKkgq~~s~~e 173 (301)
..+..++|.+-|- .-|-|| +|+.++.+ ...||.+|=...++..+
T Consensus 206 ~~~~~~aD~~eiN-iScPNt~~lr~lq~~~~l~~ll~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~PI~vKLsPd~~~~~ 284 (415)
T 3i65_A 206 NKIGRYADYIAIN-VSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQ 284 (415)
T ss_dssp HHHGGGCSEEEEE-CCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHH
T ss_pred HHHHCCCCCCEEC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHH
T ss_conf 9851237700003-778765554234567789999999999998765302210000000124667857998389987778
Q ss_pred HHHHHHHHHHCCCCCEEEEECC
Q ss_conf 9999999972587808995146
Q gi|254780669|r 174 MHNILQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 174 ~~~a~eki~~~Gn~~i~lcERG 195 (301)
...+++-+.+.|..-|+++-.-
T Consensus 285 i~~ia~~a~~~g~dgii~~Ntt 306 (415)
T 3i65_A 285 KKEIADVLLETNIDGMIISNTT 306 (415)
T ss_dssp HHHHHHHHHHHTCSEEEECCCB
T ss_pred HHHHHHHHHHCCCCCEEECCCC
T ss_conf 9999999997265231211453
No 111
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino- acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; 1.45A {Staphylococcus aureus} PDB: 3di1_A 3di0_A
Probab=67.91 E-value=6.5 Score=18.89 Aligned_cols=108 Identities=8% Similarity=0.093 Sum_probs=58.4
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCH
Q ss_conf 99954863499999999999999965533997066015576886663222456712488899988665287688522889
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTE 125 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~ 125 (301)
.+|+|- +-.|.+...+.++..++.|.+ +...-| |+.+ .+.-++-.++++++.+..++|++-
T Consensus 73 pvi~gv-~~~s~~~~i~~a~~a~~~Gad---~v~v~p---------P~~~-~~~~~~i~~~~~~va~~~~~pi~l----- 133 (292)
T 3daq_A 73 PVIAGT-GTNDTEKSIQASIQAKALGAD---AIMLIT---------PYYN-KTNQRGLVKHFEAIADAVKLPVVL----- 133 (292)
T ss_dssp CEEEEC-CCSCHHHHHHHHHHHHHHTCS---EEEEEC---------CCSS-CCCHHHHHHHHHHHHHHHCSCEEE-----
T ss_pred CEEECC-CCCCHHHHHHHHHHHHHCCCC---EEEEEC---------CCCC-CCCHHHHHHHHHHHHHCCCCCEEE-----
T ss_conf 667336-788899999999999965999---899945---------7678-899999999999998455998899-----
Q ss_pred HHHHHHHHHCCEEEECHHHC--CCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99987650215788225762--8999999985059779983677789999999999997258780
Q gi|254780669|r 126 QQCEAIADSVDILQIPALLC--RQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKD 188 (301)
Q Consensus 126 ~~~e~~~~~vDilQIgA~~~--rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~ 188 (301)
.++|.+.- ...+++..+++....|-+|..- .++..+ .+.+...+..+
T Consensus 134 ------------Yn~p~~~g~~~~~~~~~~l~~~~~vv~iK~~~-~~~~~~---~~~~~~~~~~~ 182 (292)
T 3daq_A 134 ------------YNVPSRTNMTIEPETVEILSQHPYIVALKDAT-NDFEYL---EEVKKRIDTNS 182 (292)
T ss_dssp ------------EECHHHHSCCCCHHHHHHHHTSTTEEEEEECC-CCHHHH---HHHHTTSCTTT
T ss_pred ------------EECCCCCCCCCCHHHHHHHHHCCCCEEEEECC-CCHHHH---HHHHHHHCCCE
T ss_conf ------------97886357876989999998377852899899-999999---99998633770
No 112
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=67.87 E-value=4.3 Score=20.09 Aligned_cols=18 Identities=11% Similarity=-0.051 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHCCCC
Q ss_conf 999999999965533997
Q gi|254780669|r 60 AFMIAEKLYAICQSLNIG 77 (301)
Q Consensus 60 ~~~~A~~lk~~~~~~~~~ 77 (301)
..++++.+++.+.++...
T Consensus 83 lk~l~d~vh~~G~~~~~Q 100 (365)
T 2gou_A 83 WRIVTEAVHAKGCAIFAQ 100 (365)
T ss_dssp HHHHHHHHHHHSCEEEEE
T ss_pred HHHHHHHHHHCCCCEEEC
T ss_conf 779999987479817843
No 113
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=67.82 E-value=6.5 Score=18.88 Aligned_cols=206 Identities=14% Similarity=0.099 Sum_probs=122.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH
Q ss_conf 4999999999999999655339-970660155768866632224567124888999886652876885228899998765
Q gi|254780669|r 54 IESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIA 132 (301)
Q Consensus 54 iES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~ 132 (301)
..+.+.+++-|+.+.+-|+++. +|+. ++-+-+.+.| -+. -++.-..+++.++ ..++++--|-..++-++.+.
T Consensus 25 ~~~~~~a~~~a~~~i~~GAdiIDIG~e--STrPg~~~i~---~ee-E~~Rl~p~i~~~~-~~~~~iSvDT~~~~Va~~al 97 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGE--SSRPGATRVD---PAV-ETSRVIPVVKELA-AQGITVSIDTMRADVARAAL 97 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------------HHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCE--ECCCCCCCCC---HHH-HHHCCCCEEEEEC-CCCCEEEEEECCHHHHHHHH
T ss_conf 889999999999999889949998962--0799895269---999-8632465133211-35844768527689999999
Q ss_pred H-HCCEEE-ECHHHCCCHHHHHHHHHCCCEEEEEC--CC-----C-----CC-HH----HHHHHHHHHHHCCCC-CEEEE
Q ss_conf 0-215788-22576289999999850597799836--77-----7-----89-99----999999999725878-08995
Q gi|254780669|r 133 D-SVDILQ-IPALLCRQTDLLTAAAQTGRVINVKK--GQ-----F-----LS-PW----EMHNILQKLHAHGAK-DVLFC 192 (301)
Q Consensus 133 ~-~vDilQ-IgA~~~rqtdLl~a~a~t~kpV~iKk--gq-----~-----~s-~~----e~~~a~eki~~~Gn~-~i~lc 192 (301)
+ .+||+- |-++. .+..++..+++.+.++.+-. |. . -. .. .+...++.+.+.|.. +=++.
T Consensus 98 ~~Ga~iINDvsg~~-~d~~m~~~~a~~~~~~ilmH~~g~~~~~~~~~~~~~d~i~~v~~~~~~~~~~~~~~Gi~~~~Iil 176 (280)
T 1eye_A 98 QNGAQMVNDVSGGR-ADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVL 176 (280)
T ss_dssp HTTCCEEEETTTTS-SCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred HCCCEEEEECCCCC-CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 73983897304354-66167777640478769983156653322235545530555799999999999987986444998
Q ss_pred ECCCCCCCHH--HCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCC-----CCCCCHHHHHHHHHHH--HHHCCCEEEEE
Q ss_conf 1465444010--0000001068885187168711777421223453-----2126388999999999--97189889998
Q gi|254780669|r 193 ERGTSFGYNT--LVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGN-----CSGGERQYIVPLAKAA--VAIGIAGIFLE 263 (301)
Q Consensus 193 ERG~~fgy~~--lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~-----~~gG~r~~v~~la~aa--~a~G~dGlfiE 263 (301)
.=|+-||.+. ..-=++++..++.+++|+++-.|.=-..-.-.+. ...-.| ...+++-++ +..|++ ++-
T Consensus 177 DPG~GFgKt~~~n~~ll~~l~~~~~~~~PiLvG~SRKsfig~~l~~~~~~~~~~~~R-~~~T~a~~~~a~~~Ga~--iiR 253 (280)
T 1eye_A 177 DPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRPTDGR-DTATAVISALAALHGAW--GVR 253 (280)
T ss_dssp ECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHTCCSSSCCCCGGGG-HHHHHHHHHHHHHTTCS--EEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHHHHHHHCCCC--EEE
T ss_conf 088677757625899998887861489836986137789998755876555886763-18999999999987999--999
Q ss_pred ECCCHHH
Q ss_conf 3698334
Q gi|254780669|r 264 THQDPDN 270 (301)
Q Consensus 264 ~Hp~P~~ 270 (301)
||.-.+.
T Consensus 254 VHDV~e~ 260 (280)
T 1eye_A 254 VHDVRAS 260 (280)
T ss_dssp ESCHHHH
T ss_pred ECCHHHH
T ss_conf 7998999
No 114
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6- bisphosphatase; transferase (phospho), hydrolase (phospho), glycolysis, bifunctional enzyme; HET: ATG; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=67.75 E-value=4.4 Score=20.04 Aligned_cols=14 Identities=14% Similarity=0.135 Sum_probs=6.9
Q ss_pred HHCCEEEEECCCHH
Q ss_conf 52876885228899
Q gi|254780669|r 113 KYGFPILTDVHTEQ 126 (301)
Q Consensus 113 ~~glpv~TeV~~~~ 126 (301)
+-|-.++-|-..+.
T Consensus 121 ~~g~v~I~Datn~t 134 (469)
T 1bif_A 121 EGGHVAVFDATNTT 134 (469)
T ss_dssp TCCSEEEEESCCCS
T ss_pred CCCCEEEEECCCCC
T ss_conf 69929999689899
No 115
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionine MAD, decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=67.35 E-value=6.7 Score=18.82 Aligned_cols=155 Identities=15% Similarity=0.114 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHCCE-EEEECCCHHHHHHHHH-HCCEEEECHHH------CCCH------H---HHHHHHH----CCCEEE
Q ss_conf 88999886652876-8852288999987650-21578822576------2899------9---9999850----597799
Q gi|254780669|r 104 REIFRDLKKKYGFP-ILTDVHTEQQCEAIAD-SVDILQIPALL------CRQT------D---LLTAAAQ----TGRVIN 162 (301)
Q Consensus 104 L~il~e~k~~~glp-v~TeV~~~~~~e~~~~-~vDilQIgA~~------~rqt------d---Ll~a~a~----t~kpV~ 162 (301)
+.-|++.|.+ |-| +.....|...+..+.+ .+|++=||-=+ ..+| + -.+++.| +-..+-
T Consensus 6 i~~l~~~K~~-g~ki~~lTayD~~~A~~~~~agiD~iLVGDSlgmv~~G~~~T~~vtld~mi~h~~aV~rga~~~~iv~D 84 (264)
T 1m3u_A 6 ISLLQKYKQE-KKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLAD 84 (264)
T ss_dssp HHHHHHHHHH-TCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHC-CCCEEEEECCCHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEC
T ss_conf 9999998737-995899978999999999977998899827688740687677630677898999999852446526836
Q ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEE----CHHHHHHHCC-CCCCC
Q ss_conf 836777899999999999972587808995146544401000000010688851871687----1177742122-34532
Q gi|254780669|r 163 VKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIF----DASHSVQQPG-IHGNC 237 (301)
Q Consensus 163 iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~----D~SHs~q~p~-~~~~~ 237 (301)
+--+.+.+.++-+..+.++...|. +.+-||.|.. + ...+..|.+.+.||+- =|.+..+.-| -..+.
T Consensus 85 mPf~sy~~~~~a~~~a~~~~~~Ga-daVKlEgg~~--~------~~~I~~L~~~GIPV~gHiGLtPQ~~~~~GG~k~qGk 155 (264)
T 1m3u_A 85 LPFMAYATPEQAFENAATVMRAGA-NMVKIEGGEW--L------VETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGR 155 (264)
T ss_dssp CCTTSSSSHHHHHHHHHHHHHTTC-SEEECCCSGG--G------HHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCC-CEEEECCCCH--H------HHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEECCC
T ss_conf 885222455999999999997199-7898469710--7------899999998798687632787222011488401474
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEECCCH
Q ss_conf 1263889999999999718988999836983
Q gi|254780669|r 238 SGGERQYIVPLAKAAVAIGIAGIFLETHQDP 268 (301)
Q Consensus 238 ~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P 268 (301)
+....+-+..-|++--.+|+.++-+|+=|.+
T Consensus 156 t~~ea~~l~~dA~~le~AGaf~ivlE~Vp~~ 186 (264)
T 1m3u_A 156 GDEAGDQLLSDALALEAAGAQLLVLECVPVE 186 (264)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEEESCCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHEEEEECCCHH
T ss_conf 7799999999999999733046775317588
No 116
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=66.79 E-value=6.8 Score=18.75 Aligned_cols=138 Identities=20% Similarity=0.302 Sum_probs=77.2
Q ss_pred CCCCHHHHHHHHHHHHHHCCEEEEECC---------------------------------------CHHHHHHH-HHHCC
Q ss_conf 567124888999886652876885228---------------------------------------89999876-50215
Q gi|254780669|r 97 GVGLKKGREIFRDLKKKYGFPILTDVH---------------------------------------TEQQCEAI-ADSVD 136 (301)
Q Consensus 97 G~Gle~gL~il~e~k~~~glpv~TeV~---------------------------------------~~~~~e~~-~~~vD 136 (301)
+.-+++..++|.+.|.+ -+|++.+-- +.+-++.+ ...+|
T Consensus 191 ~~~~~ea~~~l~~~~~~-~lpvvd~~g~L~glit~kDi~k~~~~p~a~~D~~grL~VgAAvg~~~~~~era~aLv~aG~d 269 (514)
T 1jcn_A 191 GVTLKEANEILQRSKKG-KLPIVNDCDELVAIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVD 269 (514)
T ss_dssp TCCSTTTTTHHHHHTCS-CCCEESSSSCCC----CCCCSSCCCCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHCC-CCCEECCCCCEEEEEEEEHHHHCCCCCCCCCHHHHCEEEEEEEECCHHHHHHHHHHHHCCCC
T ss_conf 74478999999861205-66377379978999985204433035433331764772236760485279999999853897
Q ss_pred EEEECHHHCCCH---HHHHHHHHCC--CEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----------CCCCH
Q ss_conf 788225762899---9999985059--77998367778999999999999725878089951465----------44401
Q gi|254780669|r 137 ILQIPALLCRQT---DLLTAAAQTG--RVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGT----------SFGYN 201 (301)
Q Consensus 137 ilQIgA~~~rqt---dLl~a~a~t~--kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~----------~fgy~ 201 (301)
++-|-.-+-.+. ++++.+.+.. .||.. |--.+++ +++.+...|..-|.. =-|. -+|+.
T Consensus 270 ~iviD~Ahg~s~~v~~~ik~ik~~~~~~~iia--GNVaT~~----~~~~L~~aGad~vkV-GiG~Gs~CtTr~~~GvG~p 342 (514)
T 1jcn_A 270 VIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIG--GNVVTAA----QAKNLIDAGVDGLRV-GMGCGSICITQEVMACGRP 342 (514)
T ss_dssp EEEECCSCCCSHHHHHHHHHHHHHCTTCEEEE--EEECSHH----HHHHHHHHTCSEEEE-CSSCSCCBTTBCCCSCCCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE--EEECCHH----HHHHHHHHCCCEEEE-ECCCCCCCCCCCCCCCCCC
T ss_conf 79962345127789999999997689971886--3123699----999999838888986-0346766567552234785
Q ss_pred HHCCCCCCCH----HHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 0000000106----8885187168711777421223453212638899999999997189889998
Q gi|254780669|r 202 TLVTDMRSIP----IMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE 263 (301)
Q Consensus 202 ~lvvD~~~i~----~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE 263 (301)
. +.++. ..++++.|||-|---. +.-.++ .|+|+|+|.+|+-
T Consensus 343 q----~sai~~~a~~~~~~~v~iIADGGi~----------------~~GDi~-KAla~GAd~VMlG 387 (514)
T 1jcn_A 343 Q----GTAVYKVAEYARRFGVPIIADGGIQ----------------TVGHVV-KALALGASTVMMG 387 (514)
T ss_dssp H----HHHHHHHHHHHGGGTCCEEEESCCC----------------SHHHHH-HHHHTTCSEEEES
T ss_pred H----HHHHHHHHHHHHHCCCCEEECCCCC----------------CCCHHH-HHHHCCCCEEEEC
T ss_conf 8----9999999999997599289468805----------------346799-9987189889967
No 117
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris}
Probab=66.71 E-value=6.9 Score=18.74 Aligned_cols=106 Identities=9% Similarity=0.091 Sum_probs=56.5
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--HCCEEEEECC
Q ss_conf 99954863499999999999999965533997066015576886663222456712488899988665--2876885228
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKK--YGFPILTDVH 123 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~--~glpv~TeV~ 123 (301)
.+|+| |+-.|-+.+.+.|+..++.|.+. .+--|. +.+. .-++-..++.++-+. .++||+
T Consensus 78 ~vi~g-v~~~st~~ai~la~~a~~~Gad~---i~v~pP---------~~~~--~~~~~~~~f~~i~~a~~~~~Pi~---- 138 (313)
T 3dz1_A 78 QVIVG-VSAPGFAAMRRLARLSMDAGAAG---VMIAPP---------PSLR--TDEQITTYFRQATEAIGDDVPWV---- 138 (313)
T ss_dssp EEEEE-CCCSSHHHHHHHHHHHHHHTCSE---EEECCC---------TTCC--SHHHHHHHHHHHHHHHCTTSCEE----
T ss_pred CEEEE-CCCCCHHHHHHHHHHHHHCCCCE---EEEEEE---------EECC--CCHHHHHHHHHHHHHHCCCCCEE----
T ss_conf 68996-26510489999999998659856---753100---------0015--64477899999998512577368----
Q ss_pred CHHHHHHHHHHCCEEEECHHHC--CCHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8999987650215788225762--89999999850-597799836777899999999999972
Q gi|254780669|r 124 TEQQCEAIADSVDILQIPALLC--RQTDLLTAAAQ-TGRVINVKKGQFLSPWEMHNILQKLHA 183 (301)
Q Consensus 124 ~~~~~e~~~~~vDilQIgA~~~--rqtdLl~a~a~-t~kpV~iKkgq~~s~~e~~~a~eki~~ 183 (301)
+.++|.+.- -..+++.++++ ....|-+|+.-+.....+.........
T Consensus 139 -------------iYn~P~~~g~~ls~~~~~~L~~~~~nvi~~k~~s~~~~~~~~~l~~~~~~ 188 (313)
T 3dz1_A 139 -------------LQDYPLTLSVVMTPKVIRQIVMDSASCVMLKHEDWPGLEKITTLRGFQKD 188 (313)
T ss_dssp -------------EEECHHHHCCCCCHHHHHHHHHHCSSEEEEEECCSSCHHHHHHHHHHHHH
T ss_pred -------------EECCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf -------------74376425767769999999840887489984788669999999985300
No 118
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=64.23 E-value=7.6 Score=18.44 Aligned_cols=90 Identities=10% Similarity=0.197 Sum_probs=45.0
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCH
Q ss_conf 99954863499999999999999965533997066015576886663222456712488899988665287688522889
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTE 125 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~ 125 (301)
.+|+| ++-.|.+...+.|+..++.|.+.. .+.=| +.|. +..++-.++++++.+..++|++
T Consensus 83 ~vi~g-v~~~s~~~~i~~a~~a~~~Gad~i--~v~pP----------~~~~-~~~~~i~~~~~~i~~~~~~pi~------ 142 (301)
T 1xky_A 83 PVIAG-TGSNNTHASIDLTKKATEVGVDAV--MLVAP----------YYNK-PSQEGMYQHFKAIAESTPLPVM------ 142 (301)
T ss_dssp CEEEE-CCCSCHHHHHHHHHHHHHTTCSEE--EEECC----------CSSC-CCHHHHHHHHHHHHHTCSSCEE------
T ss_pred CEEEE-ECCHHHHHHHHHHHHHHHCCCCEE--EECCC----------CCCC-CCHHHHHHHHHHHHHCCCCCEE------
T ss_conf 76887-273669999999999997599999--97899----------7899-8999999999999851899789------
Q ss_pred HHHHHHHHHCCEEEECHHH--CCCHHHHHHHHHCCCEEEEECC
Q ss_conf 9998765021578822576--2899999998505977998367
Q gi|254780669|r 126 QQCEAIADSVDILQIPALL--CRQTDLLTAAAQTGRVINVKKG 166 (301)
Q Consensus 126 ~~~e~~~~~vDilQIgA~~--~rqtdLl~a~a~t~kpV~iKkg 166 (301)
+...|.+. ....+++..+++....|-+|..
T Consensus 143 -----------lYn~P~~~g~~~~~~~~~~l~~~pnvvgiK~~ 174 (301)
T 1xky_A 143 -----------LYNVPGRSIVQISVDTVVRLSEIENIVAIKDA 174 (301)
T ss_dssp -----------EEECHHHHSSCCCHHHHHHHHTSTTEEEEEEC
T ss_pred -----------EEECCCCCCCCCCHHHHHHHCCCCCEEEEECC
T ss_conf -----------99687633558799999985338998998658
No 119
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefaciens STR. C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=63.97 E-value=7.7 Score=18.40 Aligned_cols=49 Identities=14% Similarity=0.167 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHC--CCHHHHHHHHHCCCEEEEECC
Q ss_conf 248889998866528768852288999987650215788225762--899999998505977998367
Q gi|254780669|r 101 KKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLC--RQTDLLTAAAQTGRVINVKKG 166 (301)
Q Consensus 101 e~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~--rqtdLl~a~a~t~kpV~iKkg 166 (301)
+.-..+++++.+..++|++- .++|.+.- -..+++.++++....+-+|-.
T Consensus 146 ~~i~~~f~~ia~~~~~Piii-----------------Yn~P~~~g~~l~~~~l~~L~~~pnvvgiK~~ 196 (332)
T 2r8w_A 146 EEAYHHFAAVAGATALPLAI-----------------YNNPTTTRFTFSDELLVRLAYIPNIRAIKMP 196 (332)
T ss_dssp HHHHHHHHHHHHHCSSCEEE-----------------ECCHHHHCCCCCHHHHHHHHTSTTEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEE-----------------EECCCCCCCCCCHHHHHHHHCCCCEEEEEEC
T ss_conf 89999999998603643899-----------------8156535888799999997078987999947
No 120
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=63.54 E-value=7.9 Score=18.35 Aligned_cols=188 Identities=20% Similarity=0.229 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC---CCHHHHHHHH
Q ss_conf 9999999999999965533997066015576886663222456712488899988665287688522---8899998765
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDV---HTEQQCEAIA 132 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV---~~~~~~e~~~ 132 (301)
+.|++.-+.+. .++...+.|.--|- .. -.|.| . .-..+...+.++.++||.--. .+.+++....
T Consensus 26 ~~e~~~avi~A----Aee~~sPvIlq~s~----~~--~~~~~--~-~~~~~~~~~a~~~~VpvalHlDH~~~~e~i~~ai 92 (305)
T 1rvg_A 26 NMEFLQAVLEA----AEEQRSPVILALSE----GA--MKYGG--R-ALTLMAVELAKEARVPVAVHLDHGSSYESVLRAL 92 (305)
T ss_dssp SHHHHHHHHHH----HHHTTCCEEEEEEH----HH--HHHHH--H-HHHHHHHHHHHHCSSCEEEEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHH----HHHHCCCEEEECCC----CH--HHHCC--H-HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
T ss_conf 89999999999----99969999999874----57--76643--8-9999999987665999899745557988899998
Q ss_pred H-HCCEEEE-CHH-----HCCCHH-HHHHHHHCCCEE----------------EEECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 0-2157882-257-----628999-999985059779----------------983677789999999999997258780
Q gi|254780669|r 133 D-SVDILQI-PAL-----LCRQTD-LLTAAAQTGRVI----------------NVKKGQFLSPWEMHNILQKLHAHGAKD 188 (301)
Q Consensus 133 ~-~vDilQI-gA~-----~~rqtd-Ll~a~a~t~kpV----------------~iKkgq~~s~~e~~~a~eki~~~Gn~~ 188 (301)
+ ..+-+=| ++. |.+.|- .++-+...|..| --....+-+|++.... +..+|. +
T Consensus 93 ~~GftSVMiDgS~l~~eeNi~~T~~vv~~Ah~~gv~VEaElG~igg~Ed~~~~~~~~~~~T~Peea~~F---v~~Tgv-D 168 (305)
T 1rvg_A 93 RAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIF---MERTGA-D 168 (305)
T ss_dssp HTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHH---HHHHCC-S
T ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH---HHHHCC-C
T ss_conf 749987986499888899999999999986151887665022125655555666432456899999999---997588-7
Q ss_pred EEEEECCCCCC-CH---HHCCCCCCCHHHHH-HCCCEEECH-H--------HHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 89951465444-01---00000001068885-187168711-7--------77421223453212638899999999997
Q gi|254780669|r 189 VLFCERGTSFG-YN---TLVTDMRSIPIMTS-MGVPVIFDA-S--------HSVQQPGIHGNCSGGERQYIVPLAKAAVA 254 (301)
Q Consensus 189 i~lcERG~~fg-y~---~lvvD~~~i~~lk~-~~~PVi~D~-S--------Hs~q~p~~~~~~~gG~r~~v~~la~aa~a 254 (301)
.+..-=|+..| |. +-..|+.-+..+++ ...|.++-- | +..+.++..-+.+|=.. ..-+.++.
T Consensus 169 ~LAvaiGn~HG~yk~~~~~~l~~~~l~~i~~~~~~PLvlHG~S~~~~~~~~~~~~~~~~lHG~sG~~~----e~i~~ai~ 244 (305)
T 1rvg_A 169 YLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHP----EDIKKAIS 244 (305)
T ss_dssp EEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCH----HHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCH----HHHHHHHH
T ss_conf 68543022457668888866248899999616799878668977737777776304765577789999----99999998
Q ss_pred HCCCEEEEEE
Q ss_conf 1898899983
Q gi|254780669|r 255 IGIAGIFLET 264 (301)
Q Consensus 255 ~G~dGlfiE~ 264 (301)
.|+.=+=+-|
T Consensus 245 ~GI~KiNi~T 254 (305)
T 1rvg_A 245 LGIAKINTDT 254 (305)
T ss_dssp TTEEEEEECH
T ss_pred CCCEEEEECH
T ss_conf 6955999781
No 121
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; mannac-6-P epimerase, NANE, structural genomics, protein structure initiative; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=61.22 E-value=8.6 Score=18.09 Aligned_cols=165 Identities=14% Similarity=0.148 Sum_probs=82.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE---------EC--
Q ss_conf 4999999999999999655339970660155768866632224567124888999886652876885---------22--
Q gi|254780669|r 54 IESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT---------DV-- 122 (301)
Q Consensus 54 iES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T---------eV-- 122 (301)
+.+.+.+-++|+...+.|... .+..+ .+-++++++.++.|+.- .+
T Consensus 19 m~~~~~~~~~A~a~~~~Ga~~--------------------v~~~~----~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~ 74 (223)
T 1y0e_A 19 LHSSFIMSKMALAAYEGGAVG--------------------IRANT----KEDILAIKETVDLPVIGIVKRDYDHSDVFI 74 (223)
T ss_dssp TCCHHHHHHHHHHHHHHTCSE--------------------EEEES----HHHHHHHHHHCCSCEEEECBCCCTTCCCCB
T ss_pred CCCCHHHHHHHHHHHHCCCEE--------------------EECCC----HHHHHHHHHHCCCCEEEEEECCCCCCHHCC
T ss_conf 778579999999999889969--------------------96589----788999998548864556631667822302
Q ss_pred -CCHHHHHHHH-HHCCEEEECHHHCCCH-----HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf -8899998765-0215788225762899-----99999850597799836777899999999999972587808995146
Q gi|254780669|r 123 -HTEQQCEAIA-DSVDILQIPALLCRQT-----DLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 123 -~~~~~~e~~~-~~vDilQIgA~~~rqt-----dLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG 195 (301)
-...+..... ..+|.+.++......+ ++++........+.+-. .-.++++++. ..+.|.+-+...-.|
T Consensus 75 ~~~~~~~~~~~~agad~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~t~~~a~~----~~~~g~d~i~~~~~~ 149 (223)
T 1y0e_A 75 TATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMA-DIATVEEAKN----AARLGFDYIGTTLHG 149 (223)
T ss_dssp SCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEE-ECSSHHHHHH----HHHTTCSEEECTTTT
T ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEC-CCCCHHHHHH----HHHCCCCEEEECCCC
T ss_conf 60299999999879999997545678816579999999887378715754-8799999999----997599969976778
Q ss_pred CC---CCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 54---440100000001068885-1871687117774212234532126388999999999971898899983
Q gi|254780669|r 196 TS---FGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 196 ~~---fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
.. .+-.....++..+..+++ ...|||.+- |-+. +.-++.++++|+||+++=+
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~~~~iPvia~G---------------GI~t--~ed~~~al~~GAdgV~vGs 205 (223)
T 1y0e_A 150 YTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEG---------------NVIT--PDMYKRVMDLGVHCSVVGG 205 (223)
T ss_dssp SSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEES---------------SCCS--HHHHHHHHHTTCSEEEECH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEC---------------CCCC--HHHHHHHHHCCCCEEEECH
T ss_conf 853356887655479999999842899789868---------------9899--9999999986999999842
No 122
>3eol_A Isocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=60.76 E-value=8.8 Score=18.03 Aligned_cols=153 Identities=12% Similarity=0.099 Sum_probs=70.6
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 99988665287688522889999876502-15788225762899999998505977998367778999999999999725
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
-|.++=++-+.-++-.++++-++-.+.+. .+.+++.-+-|-.+-.. +..+.|= --..+.+++...+++|...
T Consensus 52 kLr~LL~~~~~v~~~Ga~d~lsA~~~~~aGf~aiYvSG~~vaA~~~~---a~~g~PD----~gl~~~~ev~~~v~~I~~a 124 (433)
T 3eol_A 52 RLWKLIHEEDFVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANT---ASAMYPD----QSLYPANAGPELAKRINRT 124 (433)
T ss_dssp HHHHHHHHSSCEEEEBCSSHHHHHHHHHTTCCCEEEC------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHC---CCCCCCC----CCCCCHHHHHHHHHHHHHH
T ss_conf 99999717998882476788999999980998899652999744330---3678787----6734366699999999999
Q ss_pred CC-C-CEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 87-8-089951465444010000000106888518716871177742122345321263889999999999718988999
Q gi|254780669|r 185 GA-K-DVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFL 262 (301)
Q Consensus 185 Gn-~-~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfi 262 (301)
=. . ++--.||.. .....+.+|||.|.-..- |....|-.+.|.-+.+|+.|+.|
T Consensus 125 ~~~~d~~~~~e~~~--------------~~~~~~~~PiIaDaDtGf-----------G~~~nv~rtvk~~~~AGaAgihi 179 (433)
T 3eol_A 125 LQRADQIETAEGKG--------------LSVDTWFAPIVADAEAGF-----------GDPLDAFEIMKAYIEAGAAGVHF 179 (433)
T ss_dssp HHHHHHHHHHTTSC--------------CSSSCSCCCEEEECC--------------CCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHCC--------------CCCCCCCCCEEEECCCCC-----------CHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999888876226--------------765446776377568887-----------51899999999999739858987
Q ss_pred EECCCHH--HCCCCCCCCCCHHHHHHHHHH
Q ss_conf 8369833--479782018688999999999
Q gi|254780669|r 263 ETHQDPD--NAPSDGPNMINIKDLPKLLSQ 290 (301)
Q Consensus 263 E~Hp~P~--~AlsD~~q~l~l~~l~~ll~~ 290 (301)
|=.--|+ ..--+|.+-++.+++-.-++-
T Consensus 180 EDQv~~kkkCGH~~gK~lv~~~E~i~ki~A 209 (433)
T 3eol_A 180 EDQLASEKKCGHLGGKVLIPTAAHIRNLNA 209 (433)
T ss_dssp ESBCC---------CCEECCHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 337784221345577732689999999999
No 123
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondrial, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=60.58 E-value=8.9 Score=18.01 Aligned_cols=38 Identities=13% Similarity=0.102 Sum_probs=32.9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 97799836777899999999999972587808995146
Q gi|254780669|r 158 GRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 158 ~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG 195 (301)
..||.+|=...++..+...+++-+.+.|..-++++---
T Consensus 297 ~pPi~vKlsPDl~~~~i~~i~~~~~~~g~dgii~~NTt 334 (443)
T 1tv5_A 297 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTT 334 (443)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 78559986899862567889998886254599971676
No 124
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=60.55 E-value=8.9 Score=18.01 Aligned_cols=92 Identities=14% Similarity=0.153 Sum_probs=58.9
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 69995486349999999999999996553399706601557688666322245671248889998866528768852288
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHT 124 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~ 124 (301)
..+|+| |+-.|.+...+.|+..++.|.+.. .+.=| +.+. ...++-.++++++-+..++|++-
T Consensus 71 ~~vi~g-v~~~s~~~~i~~a~~a~~~Gad~i--~v~pP----------~~~~-~~~~~i~~~f~~i~~~~~~pi~i---- 132 (291)
T 3a5f_A 71 IPVIAG-TGSNNTAASIAMSKWAESIGVDGL--LVITP----------YYNK-TTQKGLVKHFKAVSDAVSTPIII---- 132 (291)
T ss_dssp SCEEEE-CCCSSHHHHHHHHHHHHHTTCSEE--EEECC----------CSSC-CCHHHHHHHC-CTGGGCCSCEEE----
T ss_pred CEEEEE-ECCCCHHHHHHHHHHHHHCCCCEE--EECCC----------CCCC-CCHHHHHHHHHHHHHHCCCCEEE----
T ss_conf 538987-678519999999999997089979--98188----------7788-99999999999998513798899----
Q ss_pred HHHHHHHHHHCCEEEECHHHC--CCHHHHHHHHHCCCEEEEECCC
Q ss_conf 999987650215788225762--8999999985059779983677
Q gi|254780669|r 125 EQQCEAIADSVDILQIPALLC--RQTDLLTAAAQTGRVINVKKGQ 167 (301)
Q Consensus 125 ~~~~e~~~~~vDilQIgA~~~--rqtdLl~a~a~t~kpV~iKkgq 167 (301)
..+|.+.- -..+++..+++....+-+|..-
T Consensus 133 -------------Yn~P~~~~~~~~~~~l~~l~~~~~i~~~K~~~ 164 (291)
T 3a5f_A 133 -------------YNVPGRTGLNITPGTLKELCEDKNIVAVXEAS 164 (291)
T ss_dssp -------------EECHHHHSCCCCHHHHHHHTTSTTEEEEEECS
T ss_pred -------------EECCCCCCCCCCHHHHHHHHCCCCCEEEEECC
T ss_conf -------------95787457777788888886189811453378
No 125
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A*
Probab=60.46 E-value=8.9 Score=18.00 Aligned_cols=178 Identities=11% Similarity=0.103 Sum_probs=96.2
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCEEEEEC
Q ss_conf 06999548634999999999999999655339970660155768866632224567124888999886652-87688522
Q gi|254780669|r 44 RFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY-GFPILTDV 122 (301)
Q Consensus 44 ~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~-glpv~TeV 122 (301)
|.+++| |=+.+.+..+++++.+.. . +. ++|-.|+- . +..|+++.+++++.+ +.++.-|.
T Consensus 7 ~~l~vA--lD~~~~~~~~~~~~~~~~---~--vd-~ikig~~l------~------~~~G~~~i~~l~~~~~~~~i~~D~ 66 (218)
T 3jr2_A 7 PMIQIA--LDQTNLTDAVAVASNVAS---Y--VD-VIEVGTIL------A------FAEGMKAVSTLRHNHPNHILVCDM 66 (218)
T ss_dssp CEEEEE--ECCSSHHHHHHHHHHHGG---G--CS-EEEECHHH------H------HHHTTHHHHHHHHHCTTSEEEEEE
T ss_pred CCEEEE--ECCCCHHHHHHHHHHCCC---C--CC-EEEEEEEC------H------HHCCHHHHHHHHHHCCCCEEEEEE
T ss_conf 860898--348999999999996388---7--65-89945642------6------535999999999757897399998
Q ss_pred CC---HHHH-HHHHH-HCCEEEECHHHCCC--HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 88---9999-87650-21578822576289--999999850597799836777899999999999972587808995146
Q gi|254780669|r 123 HT---EQQC-EAIAD-SVDILQIPALLCRQ--TDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 123 ~~---~~~~-e~~~~-~vDilQIgA~~~rq--tdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG 195 (301)
+- +..+ +.+++ .+|++=+-+.-... ..+++++.+.+....+---...++++. ..+...|...+ +.+++
T Consensus 67 K~~Di~~~~~~~~~~~gad~itvh~~~~~~~l~~~~~~~~~~g~~~~v~l~~~~~~~~~----~~~~~~~~~~~-~~~~~ 141 (218)
T 3jr2_A 67 KTTDGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQDA----KAWVDLGITQA-IYHRS 141 (218)
T ss_dssp EECSCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHH----HHHHHTTCCEE-EEECC
T ss_pred ECCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH----HHHHHCCCHHH-HHHHH
T ss_conf 51457277889988744989999503454789999998764188437842788999999----99886482286-99972
Q ss_pred CCC---CCHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 544---401000000010688851871687117774212234532126388999999999971898899983
Q gi|254780669|r 196 TSF---GYNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 196 ~~f---gy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
..- ++..-..++..+...+..+.++.+|+.=. .+ -.+.++.+|+|++.+-.
T Consensus 142 ~~~~~~~~~~~~~~l~~i~~~~~~~~~i~v~gGi~--------------~~----~~~~~~~~GaD~iVvGr 195 (218)
T 3jr2_A 142 RDAELAGIGWTTDDLDKMRQLSALGIELSITGGIV--------------PE----DIYLFEGIKTKTFIAGR 195 (218)
T ss_dssp HHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSCC--------------GG----GGGGGTTSCEEEEEESG
T ss_pred HCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC--------------CC----CHHHHHHCCCCEEEECH
T ss_conf 44244773668999999999848997078679968--------------25----79999984999999883
No 126
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica}
Probab=59.50 E-value=9.2 Score=17.89 Aligned_cols=110 Identities=18% Similarity=0.134 Sum_probs=77.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCEEEE-ECCCHHHHHHHH
Q ss_conf 999999999999999655339970660155768866632224567124888999886652-876885-228899998765
Q gi|254780669|r 55 ESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY-GFPILT-DVHTEQQCEAIA 132 (301)
Q Consensus 55 ES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~-glpv~T-eV~~~~~~e~~~ 132 (301)
.+.+.+..+++.|.+.|.+.. . -++|.+ .+++.+++++++| ++-|-. -|.+.+|++.+.
T Consensus 22 ~~~~~~~~i~~aL~~~Gi~~i---------E-------itl~~~---~a~~~i~~l~~~~p~~~vGaGTV~~~~~~~~a~ 82 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLL---------E-------VTLRTE---AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAI 82 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEE---------E-------EETTST---THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEE---------E-------EECCCC---HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
T ss_conf 999999999999998799889---------9-------968990---699999999986899759999624279999999
Q ss_pred H-HCCEEEECHHHCCCHHHHHHHHHCCCE-----EEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 0-215788225762899999998505977-----99836777899999999999972587808995
Q gi|254780669|r 133 D-SVDILQIPALLCRQTDLLTAAAQTGRV-----INVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 133 ~-~vDilQIgA~~~rqtdLl~a~a~t~kp-----V~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
+ .++.+=-|. -+.++++++.+.+-| +.+ +=.+||.|...|.+ .|.+-+-+=
T Consensus 83 ~aGA~FivsP~---~~~~v~~~a~~~~ip~~~~~~~i--PG~~TptEi~~A~~----~G~~~vK~F 139 (217)
T 3lab_A 83 DAGAQFIVSPG---LTPELIEKAKQVKLDGQWQGVFL--PGVATASEVMIAAQ----AGITQLKCF 139 (217)
T ss_dssp HHTCSEEEESS---CCHHHHHHHHHHHHHCSCCCEEE--EEECSHHHHHHHHH----TTCCEEEET
T ss_pred HHCCCEEECCC---CCHHHHHHHHHCCCCCCCCCCCC--CCCCCHHHHHHHHH----CCCCEEEEC
T ss_conf 72788877688---99999999998498644575452--78588679999997----699959964
No 127
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=59.30 E-value=9.3 Score=17.87 Aligned_cols=61 Identities=15% Similarity=0.180 Sum_probs=36.1
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
Q ss_conf 699954863499999999999999965533997066015576886663222456712488899988665287688
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPIL 119 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~ 119 (301)
..+|+| ++-.|.+...+.|+..++.|.+.. .+.=|.| +. +..++-.++++++.+..++|++
T Consensus 70 ~~vi~g-v~~~s~~~~i~~a~~a~~~Gad~v--~v~pP~~----------~~-~s~~~l~~~~~~v~~~~~~pi~ 130 (292)
T 2vc6_A 70 VPVIAG-AGSNSTAEAIAFVRHAQNAGADGV--LIVSPYY----------NK-PTQEGIYQHFKAIDAASTIPII 130 (292)
T ss_dssp SCBEEE-CCCSSHHHHHHHHHHHHHTTCSEE--EEECCCS----------SC-CCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCEEEE-CCCHHHHHHHHHHHHHHHCCCCEE--EECCCCC----------CC-CCHHHHHHHHHHHHHHCCCCEE
T ss_conf 618973-684379999999999997699999--9879988----------99-8999999999999830578789
No 128
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=59.22 E-value=9.3 Score=17.86 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=60.9
Q ss_pred HHHHHHHHHCC-CEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHH
Q ss_conf 99999985059-7799836777899999999999972587808995146544401000000010688-851871687117
Q gi|254780669|r 148 TDLLTAAAQTG-RVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDAS 225 (301)
Q Consensus 148 tdLl~a~a~t~-kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~S 225 (301)
+.|+....+.. ..+..-- ...++++..+ + ..|.+++.||-=+..... ++|+..+..+ |+.+.++|+|-|
T Consensus 105 ~~l~~~~~~~~g~~~~~~d--~~d~~~~~~~---~--~~~t~li~~EspsNP~l~--v~Di~~i~~ia~~~g~~~vVDnT 175 (386)
T 1cs1_A 105 YRLFDSLAKRGCYRVLFVD--QGDEQALRAA---L--AEKPKLVLVESPSNPLLR--VVDIAKICHLAREVGAVSVVDNT 175 (386)
T ss_dssp HHHHHHHHTTTSCEEEEEC--TTCHHHHHHH---H--HTCCSEEEEECSCTTTCC--CCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHCCCCEEEEEEEC--CCCHHHHHHH---C--CCCCEEEEECCCCCCCCC--CCCHHHHHHHHHHCCCEEEEECC
T ss_conf 8998521335548988512--7999999975---2--778619996578897542--35689999889874986999788
Q ss_pred HH---HHHC----------------CCCCCCCCC-----CHHHHHHHHHHHHHHCCCEEEEEECCCHHHCC
Q ss_conf 77---4212----------------234532126-----38899999999997189889998369833479
Q gi|254780669|r 226 HS---VQQP----------------GIHGNCSGG-----ERQYIVPLAKAAVAIGIAGIFLETHQDPDNAP 272 (301)
Q Consensus 226 Hs---~q~p----------------~~~~~~~gG-----~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~Al 272 (301)
-+ .|+| +|.++..+| +.++...+.......|. ++.|.+|+
T Consensus 176 ~atP~~~~Pl~~GaDivv~S~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~-------~~~p~da~ 239 (386)
T 1cs1_A 176 FLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV-------TGGAFDSY 239 (386)
T ss_dssp TTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTC-------BCCHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-------CCCCHHHH
T ss_conf 55824355411488899971550126787655676456846665444444312466-------67705389
No 129
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima}
Probab=59.22 E-value=9.3 Score=17.86 Aligned_cols=158 Identities=20% Similarity=0.333 Sum_probs=87.5
Q ss_pred CCCHHHHHHHHHHHHHH---CCEEEEECCCHHHHHHHHH-H-CCEEEECHHHCCCHHHHHHHHHCC---CE---EEEEC-
Q ss_conf 67124888999886652---8768852288999987650-2-157882257628999999985059---77---99836-
Q gi|254780669|r 98 VGLKKGREIFRDLKKKY---GFPILTDVHTEQQCEAIAD-S-VDILQIPALLCRQTDLLTAAAQTG---RV---INVKK- 165 (301)
Q Consensus 98 ~Gle~gL~il~e~k~~~---glpv~TeV~~~~~~e~~~~-~-vDilQIgA~~~rqtdLl~a~a~t~---kp---V~iKk- 165 (301)
|+++ |+++++++++.. -+-++|-..+.+.+..+-+ . .|.+.=| ++..+.+|+.++++.- +. +..||
T Consensus 36 P~~~-G~~~~~~i~~~~~~~~ii~~t~~~~~~~~~~a~~~Ga~~y~~Kp-~~~~~~~li~~~~~~~~~q~~v~~~~~k~~ 113 (237)
T 3cwo_X 36 PEMN-GIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVNT-AAVENPSLITQIAQTFGSQAVVVAIDAKRV 113 (237)
T ss_dssp TTSS-HHHHHHHHHHHSSSCCEEEECCSSTHHHHHHHHHTTCCEEEESH-HHHHCTHHHHHHHHHHTGGGEEEEEEEEES
T ss_pred CCCC-HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECC-CCCCCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_conf 9989-99999999986899849999816513232478845987699898-563677999999999865038999987642
Q ss_pred -CCC---------CCHHHHHHHHHHHHHCCCCCEEEEE---CCCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHC
Q ss_conf -777---------8999999999999725878089951---4654440100000001068885-1871687117774212
Q gi|254780669|r 166 -GQF---------LSPWEMHNILQKLHAHGAKDVLFCE---RGTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQP 231 (301)
Q Consensus 166 -gq~---------~s~~e~~~a~eki~~~Gn~~i~lcE---RG~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p 231 (301)
+++ .+..++...+.++...|..++.++. -||.-|+ |++.+....+ ...|++.-..=
T Consensus 114 ~~~~~~~~~~g~~~t~~~~~~~i~~~~~~g~~ei~v~~i~~dGt~kg~-----d~~~i~~~s~~~~~P~i~~gG~----- 183 (237)
T 3cwo_X 114 DGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-----DTEMIRFVRPLTTLPIIASGGA----- 183 (237)
T ss_dssp SSCEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTCCSCC-----CHHHHHHHGGGCCSCEEEESCC-----
T ss_pred CCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC-----CHHHHHHHHHHCCCCEEEECCC-----
T ss_conf 477423224786633198999999998258856899843598767854-----3798887765110214765666-----
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE--CCCHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 234532126388999999999971898899983--6983347978201868899999999
Q gi|254780669|r 232 GIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET--HQDPDNAPSDGPNMINIKDLPKLLS 289 (301)
Q Consensus 232 ~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~--Hp~P~~AlsD~~q~l~l~~l~~ll~ 289 (301)
+..+-+. .+..+|++|.++.. |- +.+++.++++.|.
T Consensus 184 --------~~~e~l~----e~~~~g~~a~~~gs~~~~----------~~~~i~e~k~~L~ 221 (237)
T 3cwo_X 184 --------GKMEHFL----EAFLAGADAALAASVFHF----------REIDVRELKEYLK 221 (237)
T ss_dssp --------CSHHHHH----HHHHHTCSEEEESHHHHT----------TSSCHHHHHHHHH
T ss_pred --------CCHHHHH----HHHHCCCCEEEEHHHHHC----------CCCCHHHHHHHHH
T ss_conf --------8899999----998579815644015643----------8988999999999
No 130
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=58.50 E-value=9.6 Score=17.78 Aligned_cols=88 Identities=15% Similarity=0.115 Sum_probs=44.7
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHH
Q ss_conf 95486349999999999999996553399706601557688666322245671248889998866528768852288999
Q gi|254780669|r 48 IAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQ 127 (301)
Q Consensus 48 IAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~ 127 (301)
|+|-.. .|-+.+.+.|+..++.|.+. ...=| |+.|.....+.-.++++++.+..++|++-= +.|.-
T Consensus 68 i~gv~~-~st~~~i~~a~~a~~~G~d~---i~~~p---------p~~~~~~~~~~i~~~~~~ia~~~~~pi~lY-n~P~~ 133 (286)
T 2r91_A 68 IVQVAS-LNADEAIALAKYAESRGAEA---VASLP---------PYYFPRLSERQIAKYFRDLCSAVSIPVFLY-NYPAA 133 (286)
T ss_dssp EEECCC-SSHHHHHHHHHHHHHTTCSE---EEECC---------SCSSTTCCHHHHHHHHHHHHHHCSSCEEEE-ECHHH
T ss_pred EECCCC-CCHHHHHHHHHHHHHCCCCE---EEECC---------CCCCCCCCHHHHHHHHHHHHHCCCCEEEEE-CCCCC
T ss_conf 211124-32589999999999869998---98669---------852346888999999998762447437763-48766
Q ss_pred HHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECC
Q ss_conf 987650215788225762899999998505977998367
Q gi|254780669|r 128 CEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKG 166 (301)
Q Consensus 128 ~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkg 166 (301)
. .+++ ..+++.++ ...+.+|-.
T Consensus 134 ---~--g~~l---------~~~l~~~l---~~i~giK~~ 155 (286)
T 2r91_A 134 ---V--GRDV---------DARAAKEL---GCIRGVKDT 155 (286)
T ss_dssp ---H--SSCC---------CHHHHHHH---SCEEEEEEC
T ss_pred ---C--CCCC---------HHHHHHHH---CCEEEEEEC
T ss_conf ---1--3030---------56777876---664379848
No 131
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MCSG, protein structure initiative; 1.20A {Agrobacterium tumefaciens str}
Probab=57.99 E-value=9.8 Score=17.73 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=8.7
Q ss_pred EEECHHH--CCCHHHHHHHHH
Q ss_conf 8822576--289999999850
Q gi|254780669|r 138 LQIPALL--CRQTDLLTAAAQ 156 (301)
Q Consensus 138 lQIgA~~--~rqtdLl~a~a~ 156 (301)
.++|.+. --..+++..+++
T Consensus 139 yn~p~~tg~~l~~~~l~~L~~ 159 (294)
T 3b4u_A 139 YNIPSVTMVTLSVELVGRLKA 159 (294)
T ss_dssp EECHHHHSCCCCHHHHHHHHH
T ss_pred CCCCCCCCEEECHHHHHHHHH
T ss_conf 688742426417999999997
No 132
>1ad1_A DHPS, dihydropteroate synthetase; transferase, APO form, complex with OH-CH2-pterin-pyrophosphate; 2.20A {Staphylococcus aureus} SCOP: c.1.21.1 PDB: 1ad4_A*
Probab=57.94 E-value=9.8 Score=17.72 Aligned_cols=205 Identities=14% Similarity=0.147 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH
Q ss_conf 999999999999999655339-9706601557688666322245671248889998866528768852288999987650
Q gi|254780669|r 55 ESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIAD 133 (301)
Q Consensus 55 ES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~ 133 (301)
-+.+.+++-|+.+.+-|+++. +|+- +|-+.+.+-|. ..+ ++.-+.+++.++ ++++++--|-..++-++.+.+
T Consensus 23 ~~~~~a~~~~~~~i~~GAdiIDIGae--STrPga~~i~~--eeE--~~Rl~pvl~~i~-~~~~~iSIDT~~~eVa~~al~ 95 (266)
T 1ad1_A 23 NNVESAVTRVKAMMDEGADIIDVGGV--STRPGHEMITV--EEE--LNRVLPVVEAIV-GFDVKISVDTFRSEVAEACLK 95 (266)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEESC--CCSTTCCCCCH--HHH--HHHHHHHHHHHT-TSSSEEEEECSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCC--CCCCCCCCCCH--HHH--HHHHHHHHHHHH-CCCCCEEEEECCHHHHHHHHH
T ss_conf 89999999999999879989997986--18999986699--999--988402455541-368624460188999999998
Q ss_pred -HCCEEE-ECHHHCCCHHHHHHHHHCCCEEEEEC----CCCCCH-HH----HHHHHHHHHHCCCC-CEEEEECCCCCCCH
Q ss_conf -215788-22576289999999850597799836----777899-99----99999999725878-08995146544401
Q gi|254780669|r 134 -SVDILQ-IPALLCRQTDLLTAAAQTGRVINVKK----GQFLSP-WE----MHNILQKLHAHGAK-DVLFCERGTSFGYN 201 (301)
Q Consensus 134 -~vDilQ-IgA~~~rqtdLl~a~a~t~kpV~iKk----gq~~s~-~e----~~~a~eki~~~Gn~-~i~lcERG~~fgy~ 201 (301)
.+||+- |-+. ....++++.+++.+.|+.+-- .+...+ .+ +..-.++....|-. +-|+..=|+-||.+
T Consensus 96 ~G~~iINDVsgg-~~D~~m~~~va~~~~~~ilmH~~~~~~~~~~~~~v~~~~~~~~~~~~~~Gi~~~~IilDPGiGFgKt 174 (266)
T 1ad1_A 96 LGVDIINDQWAG-LYDHRMFQVVAKYDAEIVLMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKT 174 (266)
T ss_dssp TTCCEEEETTTT-SSCTHHHHHHHHTTCEEEEECCCCTTCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCC
T ss_pred CCCCEEEECCCC-CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCEEECCCCCCCCC
T ss_conf 799199950346-6670289999714998687207866554310001335789999999975986313886476366767
Q ss_pred HH--CCCCCCCHHHHHHCCCEEECHHHHHHHCCCCC-CCCCCCHHHHH-HHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 00--00000106888518716871177742122345-32126388999-99999997189889998369833
Q gi|254780669|r 202 TL--VTDMRSIPIMTSMGVPVIFDASHSVQQPGIHG-NCSGGERQYIV-PLAKAAVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 202 ~l--vvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~-~~~gG~r~~v~-~la~aa~a~G~dGlfiE~Hp~P~ 269 (301)
.- .-=++++..++.+++||++-.|.=-..-.-.+ ..+.-.|.... ..+..|+..|++ ++-||.-.+
T Consensus 175 ~~~n~~ll~~l~~~~~~~~PiLvG~SRKsfi~~l~g~~~~~~~r~~~tla~~~~a~~~Ga~--iiRvHDV~~ 244 (266)
T 1ad1_A 175 RNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVR--AVRVHNVEL 244 (266)
T ss_dssp HHHHHHHHHCHHHHHTTCSCBEECCTTSHHHHTTSSSCCCGGGGHHHHHHHHHHHHHHTCC--EEEESCHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC--EEEECCHHH
T ss_conf 2104999997999724798679962478899997568998787428999999999987999--999499799
No 133
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural genomics of infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=57.59 E-value=9.9 Score=17.68 Aligned_cols=87 Identities=13% Similarity=0.098 Sum_probs=44.2
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHC------------CCHHHHHHHHH----CCCEEEEE--CCC
Q ss_conf 9988665287688522889999876502-15788225762------------89999999850----59779983--677
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLC------------RQTDLLTAAAQ----TGRVINVK--KGQ 167 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~------------rqtdLl~a~a~----t~kpV~iK--kgq 167 (301)
|+++-+.-+.-++..++|+-.+..+.+. .|.+|++.+-. -.++++..+.+ ++.||.+- .|+
T Consensus 21 lr~ll~~~~~l~~p~~~D~~SA~i~e~aGf~ai~~ss~~~aas~G~pD~~ll~~~e~~~~~~~I~~~~~iPviaD~d~Gy 100 (305)
T 3ih1_A 21 FRALVEANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGF 100 (305)
T ss_dssp HHHHHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCS
T ss_pred HHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99986279978955888899999999859999995689999977999988899999999999888743887525110257
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 789999999999997258780899514
Q gi|254780669|r 168 FLSPWEMHNILQKLHAHGAKDVLFCER 194 (301)
Q Consensus 168 ~~s~~e~~~a~eki~~~Gn~~i~lcER 194 (301)
. ++.+....+..+...|.--|.+-..
T Consensus 101 G-~~~~~~~tv~~l~~aGvagi~IEDq 126 (305)
T 3ih1_A 101 G-GVLNVARTAVEMVEAKVAAVQIEDQ 126 (305)
T ss_dssp S-SHHHHHHHHHHHHHTTCSEEEEECB
T ss_pred C-CHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 8-4689999999999705866785335
No 134
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=57.30 E-value=10 Score=17.65 Aligned_cols=185 Identities=19% Similarity=0.275 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--ECCCHHHHHHHHH-HCC
Q ss_conf 9999999999655339970660155768866632224567124888999886652876885--2288999987650-215
Q gi|254780669|r 60 AFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DVHTEQQCEAIAD-SVD 136 (301)
Q Consensus 60 ~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV~~~~~~e~~~~-~vD 136 (301)
-.++|+.+.+.+.+. ++=--.|.+ .+ +...-+++++++.+...+|+.- =|...++++.+.+ .+|
T Consensus 32 P~~~a~~~~~~g~de----i~ivDld~~--------~~-~~~~~~~~i~~i~~~~~~pi~~gGGir~~e~~~~~l~~Ga~ 98 (253)
T 1thf_D 32 PVELGKFYSEIGIDE----LVFLDITAS--------VE-KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGAD 98 (253)
T ss_dssp HHHHHHHHHHTTCCE----EEEEESSCS--------SS-HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHCCCCE----EEEEECCCC--------CC-CCHHHHHHHHHHHHHCCCCEEEECCEEECCCHHHHHHCCCC
T ss_conf 999999999869988----999841243--------34-64338999999997359975874557522217889874999
Q ss_pred EEEECHHHCCCHHHHHHHHHC-C--CEE---EEEC--C------------CCCCHHHHHHHHHHHHHCCCCCEEEEEC--
Q ss_conf 788225762899999998505-9--779---9836--7------------7789999999999997258780899514--
Q gi|254780669|r 137 ILQIPALLCRQTDLLTAAAQT-G--RVI---NVKK--G------------QFLSPWEMHNILQKLHAHGAKDVLFCER-- 194 (301)
Q Consensus 137 ilQIgA~~~rqtdLl~a~a~t-~--kpV---~iKk--g------------q~~s~~e~~~a~eki~~~Gn~~i~lcER-- 194 (301)
=+=||+...+|.++++++++. | ..| .+|+ + ...++.||+ +++...|...++++.=
T Consensus 99 kVvigs~~~~~~~~l~~~~~~~G~~~iv~~id~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~~~~g~~eiiltdI~~ 175 (253)
T 1thf_D 99 KVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWV---VEVEKRGAGEILLTSIDR 175 (253)
T ss_dssp EEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHH---HHHHHTTCSEEEEEETTT
T ss_pred EEEECHHHHHCHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHHH---HHHHHCCCCEEEEEEECC
T ss_conf 99988478629799999999849844699877872278345554114413787699999---998863799799997524
Q ss_pred -CCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCC
Q ss_conf -654440100000001068885-187168711777421223453212638899999999997189889998369833479
Q gi|254780669|r 195 -GTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAP 272 (301)
Q Consensus 195 -G~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~Al 272 (301)
|+.-|++. .-+..+++ ...|++. +||-+.+ ..+.+ ....|++|..+-. |+
T Consensus 176 dGt~~G~d~-----~~l~~i~~~~~~pii~---------------~GGv~s~-~dl~~-l~~~g~~gvivgs------al 227 (253)
T 1thf_D 176 DGTKSGYDT-----EMIRFVRPLTTLPIIA---------------SGGAGKM-EHFLE-AFLAGADAALAAS------VF 227 (253)
T ss_dssp TTSCSCCCH-----HHHHHHGGGCCSCEEE---------------ESCCCSH-HHHHH-HHHTTCSEEEESH------HH
T ss_pred CCCCCCCCH-----HHHHHHHHCCCCCEEE---------------ECCCCCH-HHHHH-HHHCCCCEEEEEH------HH
T ss_conf 576577540-----1334555247987898---------------4698999-99999-9978998999804------87
Q ss_pred CCCCCCCCHHHHHHHHHH
Q ss_conf 782018688999999999
Q gi|254780669|r 273 SDGPNMINIKDLPKLLSQ 290 (301)
Q Consensus 273 sD~~q~l~l~~l~~ll~~ 290 (301)
.. +.+++.++.+.+++
T Consensus 228 ~~--~~~~~~~lk~~l~~ 243 (253)
T 1thf_D 228 HF--REIDVRELKEYLKK 243 (253)
T ss_dssp HT--TCSCHHHHHHHHHH
T ss_pred HC--CCCCHHHHHHHHHH
T ss_conf 76--99999999999998
No 135
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=56.40 E-value=10 Score=17.56 Aligned_cols=182 Identities=16% Similarity=0.201 Sum_probs=91.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC--CCHHHHHHH
Q ss_conf 499999999999999965533997066015576886663222456712488899988665287688522--889999876
Q gi|254780669|r 54 IESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDV--HTEQQCEAI 131 (301)
Q Consensus 54 iES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV--~~~~~~e~~ 131 (301)
+-|.|++++.|+.+++.|.. ...+-.+.. +.+ ...++.-+++++.+++ ..+.+.+.+ .+.++++.+
T Consensus 98 l~s~eeI~e~a~~~~~~G~~---~i~l~~g~~------~~~--~~~~~~~~~~i~~i~~-~~~~i~~~~~~l~~e~l~~L 165 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAGST---RFCMGAAWK------NPH--ERDMPYLEQMVQGVKA-MGLEACMTLGTLSESQAQRL 165 (369)
T ss_dssp CCCHHHHHHHHHHHHHTTCS---EEEEEECCS------SCC--TTTHHHHHHHHHHHHH-TTSEEEEECSSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCE---EEEEEECCC------CCC--CCHHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHH
T ss_conf 68879999999989875997---999995788------887--0279999999998520-47547651267989999999
Q ss_pred HHH-CCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCC-CC
Q ss_conf 502-1578822576289999999850597799836777899999999999972587808995146544401000000-01
Q gi|254780669|r 132 ADS-VDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDM-RS 209 (301)
Q Consensus 132 ~~~-vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~-~~ 209 (301)
++. +|.+-++--. .-++..... .-.+.++|+.+.+.....|-+ .| -|..||...-.-|. ..
T Consensus 166 k~aG~~~~~~~lEt--~~~~~~~~~-----------~~~~~~~rl~~l~~a~~~Gi~---~~-~g~i~G~gEt~ed~i~~ 228 (369)
T 1r30_A 166 ANAGLDYYNHNLDT--SPEFYGNII-----------TTRTYQERLDTLEKVRDAGIK---VC-SGGIVGLGETVKDRAGL 228 (369)
T ss_dssp HHHCCCEEECCCBS--CHHHHHHHC-----------CSSCHHHHHHHHHHHHHHHCE---EE-CCEEECSSCCHHHHHHH
T ss_pred HHHCCCEECCCHHH--HHHHHCCCC-----------CCCCHHHHHHHHHHHHHHCCC---CE-EEEEECCCCCHHHHHHH
T ss_conf 85187888343424--555421343-----------458799999999999982897---35-88897889999999999
Q ss_pred CHHHHHHC-----CCE-EECH-------------------HHHHH---HCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 06888518-----716-8711-------------------77742---12234532126388999999999971898899
Q gi|254780669|r 210 IPIMTSMG-----VPV-IFDA-------------------SHSVQ---QPGIHGNCSGGERQYIVPLAKAAVAIGIAGIF 261 (301)
Q Consensus 210 i~~lk~~~-----~PV-i~D~-------------------SHs~q---~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlf 261 (301)
+..+++.. .|+ .+-| +.++- +|...-..++|+-.+-+.+...++.+|+|++|
T Consensus 229 l~~Lr~L~~~~~~v~~~~f~P~~gT~l~~~~~~~~~e~lr~iAi~Rl~lP~~~i~i~~~r~~~~~~~~~~~l~aGaN~im 308 (369)
T 1r30_A 229 LLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIF 308 (369)
T ss_dssp HHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTSEEEEESSGGGSCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHCCCEEE
T ss_conf 99998668998665550046689997666789999999999999999778864388611554187789999971895898
Q ss_pred EEE
Q ss_conf 983
Q gi|254780669|r 262 LET 264 (301)
Q Consensus 262 iE~ 264 (301)
++.
T Consensus 309 ~g~ 311 (369)
T 1r30_A 309 YGC 311 (369)
T ss_dssp CSS
T ss_pred ECC
T ss_conf 668
No 136
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3itc_A* 3k5x_A*
Probab=55.67 E-value=11 Score=17.48 Aligned_cols=18 Identities=22% Similarity=0.309 Sum_probs=8.1
Q ss_pred HHHHHHCCCCCEEEEECC
Q ss_conf 999972587808995146
Q gi|254780669|r 178 LQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 178 ~eki~~~Gn~~i~lcERG 195 (301)
++.+...|-.-+.||.-.
T Consensus 135 l~~~y~lGvR~i~Lt~n~ 152 (400)
T 3id7_A 135 LRALYALGVRYMTLTHND 152 (400)
T ss_dssp HHHHHHTTEEEEESCSSS
T ss_pred HHHHHHHCCEEEEECCCC
T ss_conf 999997185699940468
No 137
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=55.55 E-value=11 Score=17.47 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=56.8
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 69995486349999999999999996553399706601557688666322245671248889998866528768852288
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHT 124 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~ 124 (301)
..+|+| |+-.|.+...+.|+..++.|.+.. .+.=|. .|. ...++-.+.++++.+..++|++
T Consensus 70 ~~vi~g-v~~~s~~~~i~~a~~a~~~Gad~i--~v~pP~----------~~~-~~~~~~~~~~~~i~~~~~~pi~----- 130 (294)
T 2ehh_A 70 IKVIAG-TGGNATHEAVHLTAHAKEVGADGA--LVVVPY----------YNK-PTQRGLYEHFKTVAQEVDIPII----- 130 (294)
T ss_dssp SEEEEE-CCCSCHHHHHHHHHHHHHTTCSEE--EEECCC----------SSC-CCHHHHHHHHHHHHHHCCSCEE-----
T ss_pred CCEEEE-ECCCCHHHHHHHHHHHHHCCCCEE--EECCCC----------CCC-CCHHHHHHHHHHHHHHCCCCEE-----
T ss_conf 878998-178459999999999997699999--988999----------999-8999999999999971399789-----
Q ss_pred HHHHHHHHHHCCEEEECHHHC--CCHHHHHHH-HHCCCEEEEECCCCCCHHHHHH
Q ss_conf 999987650215788225762--899999998-5059779983677789999999
Q gi|254780669|r 125 EQQCEAIADSVDILQIPALLC--RQTDLLTAA-AQTGRVINVKKGQFLSPWEMHN 176 (301)
Q Consensus 125 ~~~~e~~~~~vDilQIgA~~~--rqtdLl~a~-a~t~kpV~iKkgq~~s~~e~~~ 176 (301)
+.+.|.+.- -..+++.++ .+....+-+|..- .+.+.+..
T Consensus 131 ------------lYn~p~~~g~~~~~~~l~~l~~~~~nv~giK~~~-~d~~~~~~ 172 (294)
T 2ehh_A 131 ------------IYNIPSRTCVEISVDTMFKLASECENIVASKEST-PNMDRISE 172 (294)
T ss_dssp ------------EEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC-SCHHHHHH
T ss_pred ------------EEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCC-CCHHHHHH
T ss_conf ------------9956310487642579999984358559998088-88899999
No 138
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A
Probab=55.11 E-value=11 Score=17.42 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=9.5
Q ss_pred CCHHHHHHHHHHHHHH--CCEEEEEC
Q ss_conf 7124888999886652--87688522
Q gi|254780669|r 99 GLKKGREIFRDLKKKY--GFPILTDV 122 (301)
Q Consensus 99 Gle~gL~il~e~k~~~--glpv~TeV 122 (301)
..+|-.++++.+.+.. .+|++.-|
T Consensus 82 s~eEr~~l~~~~~~~~~~r~pvi~gv 107 (343)
T 2v9d_A 82 GAEERKAIARFAIDHVDRRVPVLIGT 107 (343)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEC
T ss_conf 29999999999999738988279854
No 139
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=54.98 E-value=3.2 Score=20.94 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=15.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 777899999999999972587808995
Q gi|254780669|r 166 GQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 166 gq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
|.|.+..+...+.+++...|-+..|+-
T Consensus 51 Gpf~~~~~A~~~~~~L~~~G~~~~i~~ 77 (81)
T 1uta_A 51 GPVKGKENADSTLNRLKMAGHTNCIRL 77 (81)
T ss_dssp SSCBTTTHHHHHHHHHHHHCCSCCBCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 773999999999999998799986993
No 140
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=54.74 E-value=11 Score=17.38 Aligned_cols=146 Identities=16% Similarity=0.157 Sum_probs=79.3
Q ss_pred CEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC--------------CCCCCCCCCCH
Q ss_conf 2797699706999548634999999999999999655339970660155768866--------------63222456712
Q gi|254780669|r 36 QVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRS--------------SLAGKRGVGLK 101 (301)
Q Consensus 36 ~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRt--------------S~~sfrG~Gle 101 (301)
+++|-+ |+.+=||| .-.+.+++..+. +.+. =..+.|+-+.++.+. +-.+|...|++
T Consensus 8 Gl~~~n--Pi~~aag~-~~~~~~~~~~~~----~~g~---Gavv~kti~~~~~~gn~~pr~~~~~~~~~n~~G~~n~g~~ 77 (311)
T 1jub_A 8 NAKFAN--PFMNASGV-HCMTIEDLEELK----ASQA---GAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFD 77 (311)
T ss_dssp TEEESS--SEEECTTS-SCSSHHHHHHHH----HSSC---SCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHH
T ss_pred CEECCC--CEEECCCC-CCCCHHHHHHHH----HCCC---EEEEEEEEECCCCCCCCCCEEEECCCHHHHCCCCCCCCHH
T ss_conf 987389--83888788-879999999999----7795---7999879801455369998389866414421576672089
Q ss_pred HHHHHHHHHHHH--HCCEEEEECCC---HHHH---HHH--HHHCCEEEECHHHCCCH--------------HHHHHHHH-
Q ss_conf 488899988665--28768852288---9999---876--50215788225762899--------------99999850-
Q gi|254780669|r 102 KGREIFRDLKKK--YGFPILTDVHT---EQQC---EAI--ADSVDILQIPALLCRQT--------------DLLTAAAQ- 156 (301)
Q Consensus 102 ~gL~il~e~k~~--~glpv~TeV~~---~~~~---e~~--~~~vDilQIgA~~~rqt--------------dLl~a~a~- 156 (301)
.-++.+.+.+++ .+.|++--|.- .+.. +.+ ++++|++-+- ..|-|+ ++++++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~pii~si~g~~~~~~~~~~~~~~~a~~ad~ielN-lscPn~~~~~~~~~~~~~~~~~~~~v~~~ 156 (311)
T 1jub_A 78 YYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELN-LSCPNVPGEPQLAYDFEATEKLLKEVFTF 156 (311)
T ss_dssp HHHHHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEE-SCCCCSSSCCCGGGCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEC-CCCCCCCCHHHHHHCHHHHHHHHHHHHHC
T ss_conf 99998888887515578806642166642268999886406756535551-54667675133330799999999987530
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 597799836777899999999999972587808995
Q gi|254780669|r 157 TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 157 t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
+++||.+|-..+.+..+...+++.+...|..-+...
T Consensus 157 ~~~Pv~vKl~p~~~~~~~~~~~~~~~~~~~~~i~~~ 192 (311)
T 1jub_A 157 FTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECC
T ss_conf 244322457886316679999999862274718623
No 141
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=54.62 E-value=11 Score=17.37 Aligned_cols=108 Identities=15% Similarity=0.167 Sum_probs=78.1
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CEE-EEECCCHHHHHHH
Q ss_conf 9999999999999996553399706601557688666322245671248889998866528--768-8522889999876
Q gi|254780669|r 55 ESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYG--FPI-LTDVHTEQQCEAI 131 (301)
Q Consensus 55 ES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~g--lpv-~TeV~~~~~~e~~ 131 (301)
.+.|++..+++.+.+-|.+.. - -.+|.+ .+++.+++++++|+ +-| .--|.+.+|++.+
T Consensus 16 ~~~~~a~~~a~al~~~Gi~~i-----E-----------itl~tp---~a~~~i~~l~~~~~~~~~vGaGTV~~~~~~~~a 76 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAV-----E-----------IPLNSP---QWEQSIPAIVDAYGDKALIGAGTVLKPEQVDAL 76 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEE-----E-----------EETTST---THHHHHHHHHHHHTTTSEEEEECCCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEE-----E-----------EECCCC---CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
T ss_conf 999999999999998699989-----9-----------957993---499999999996687507853022247889999
Q ss_pred HH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 50-2157882257628999999985059779983677789999999999997258780899
Q gi|254780669|r 132 AD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 132 ~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
.+ .+|.+=-|. -+.++++++.+.+.|+.-= -+||.|...|.+ .|.+-+-+
T Consensus 77 ~~aGA~FivsP~---~~~~v~~~a~~~~i~~iPG---v~TpsEi~~A~~----~G~~~vK~ 127 (212)
T 2v82_A 77 ARMGCQLIVTPN---IHSEVIRRAVGYGMTVCPG---CATATEAFTALE----AGAQALKI 127 (212)
T ss_dssp HHTTCCEEECSS---CCHHHHHHHHHTTCEEECE---ECSHHHHHHHHH----TTCSEEEE
T ss_pred HHCCCCEEECCC---CCHHHHHHHHHCCCCCCCC---CCCHHHHHHHHH----CCCCEEEE
T ss_conf 854897898998---9989999999758763388---487699999998----29885863
No 142
>3noe_A DAP-A, dihydrodipicolinate synthase; Lys biosynthesis pathway, lyase; 2.95A {Pseudomonas aeruginosa}
Probab=54.01 E-value=11 Score=17.31 Aligned_cols=111 Identities=14% Similarity=0.208 Sum_probs=61.6
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHH
Q ss_conf 99548634999999999999999655339970660155768866632224567124888999886652876885228899
Q gi|254780669|r 47 LIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQ 126 (301)
Q Consensus 47 iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~ 126 (301)
+|+|..+ .|.+.+.+.|+..++.|.+.. .+.-|.|.+ +.-++-.+.++++.+..++|++-
T Consensus 73 vi~gv~~-~s~~~~i~~a~~a~~~Gad~v--~v~~P~~~~-----------~~~~~i~~~~~~ia~~~~~pi~~------ 132 (292)
T 3noe_A 73 VIAGTGA-NSTREAVALTEAAKSGGADAC--LLVTPYYNK-----------PTQEGMYQHFRHIAEAVAIPQIL------ 132 (292)
T ss_dssp EEEECCC-SSHHHHHHHHHHHHTTTCSEE--EEECCCSSC-----------CCHHHHHHHHHHHHHHSCSCEEE------
T ss_pred EEEECCC-CCHHHHHHHHHHHHHCCCCEE--EECCCCCCC-----------CCHHHHHHHHHHHHHHCCCCEEE------
T ss_conf 8985587-559999999999998499999--988998899-----------89999999999999747998899------
Q ss_pred HHHHHHHHCCEEEECHHHC--CCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 9987650215788225762--89999999850597799836777899999999999972587808995
Q gi|254780669|r 127 QCEAIADSVDILQIPALLC--RQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 127 ~~e~~~~~vDilQIgA~~~--rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
.+.|++.- -..++++.+++....+-+|-.-. +...+.... ...+.+-.+++
T Consensus 133 -----------Y~~p~~~g~~~~~~~~~~l~~~pni~giK~~~~-d~~~~~~~~---~~~~~~~~v~~ 185 (292)
T 3noe_A 133 -----------YNVPGRTSCDMLPETVERLSKVPNIIGIKEATG-DLQRAKEVI---ERVGKDFLVYS 185 (292)
T ss_dssp -----------EECHHHHSCCCCHHHHHHHHTSTTEEEEEECSC-CHHHHHHHH---HHSCTTSEEEE
T ss_pred -----------EECCCCCCCCCCHHHHHHHHCCCCEEEEECCCC-CHHHHHHHH---HHCCCCCEEEE
T ss_conf -----------979864477899999999847999899974879-989999999---97699959985
No 143
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=52.23 E-value=12 Score=17.13 Aligned_cols=93 Identities=12% Similarity=0.072 Sum_probs=38.0
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC---C
Q ss_conf 9954863499999999999999965533997066015576886663222456712488899988665287688522---8
Q gi|254780669|r 47 LIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDV---H 123 (301)
Q Consensus 47 iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV---~ 123 (301)
++.||..+=---.+-+.|..++.-+.+. .+- +.+.||-- +.+-|+...+..++|+...- .
T Consensus 161 l~vG~nGvGKTTTiaKLA~~~k~~g~kv---~l~----------a~DTfRaa----AveQL~~~a~~~~v~~~~~~~~~~ 223 (359)
T 2og2_A 161 MIVGVNGGGKTTSLGKLAHRLKNEGTKV---LMA----------AGDTFRAA----ASDQLEIWAERTGCEIVVAEGDKA 223 (359)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHTTCCE---EEE----------CCCCSCHH----HHHHHHHHHHHHTCEEECCSSSSC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCCC---EEE----------ECCCCCHH----HHHHHHHHHHHCCCCEEECCCCCH
T ss_conf 9978888864617999999999669986---056----------40423276----999999998642884242157622
Q ss_pred CHHHHHH-----H-HHHCCEEEE--CHHHCCCHHHHHHHHH
Q ss_conf 8999987-----6-502157882--2576289999999850
Q gi|254780669|r 124 TEQQCEA-----I-ADSVDILQI--PALLCRQTDLLTAAAQ 156 (301)
Q Consensus 124 ~~~~~e~-----~-~~~vDilQI--gA~~~rqtdLl~a~a~ 156 (301)
++..+.. + ++..|++=| +.|+-.+.+|..++.+
T Consensus 224 ~~a~v~~~a~~~Ak~~~~DvvlIDTAGR~~~~~~lm~EL~k 264 (359)
T 2og2_A 224 KAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIA 264 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 77888899999999779998998488878565889999999
No 144
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=51.59 E-value=12 Score=17.06 Aligned_cols=87 Identities=13% Similarity=0.080 Sum_probs=36.5
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHC-------------CCHHHHHHHHH----CCCEEEEE--CC
Q ss_conf 9988665287688522889999876502-15788225762-------------89999999850----59779983--67
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLC-------------RQTDLLTAAAQ----TGRVINVK--KG 166 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~-------------rqtdLl~a~a~----t~kpV~iK--kg 166 (301)
|+++-+.-+.-++-.++|+-.+-.+.+. .+.+++..+-. -.++++..+.+ ++.||.+- .|
T Consensus 9 lr~l~~~~~~l~~p~~~D~~SA~~~e~~Gf~ai~~sg~~~aa~~~G~pD~~~~~~~e~~~~~~~I~~~~~iPv~vD~d~G 88 (295)
T 1xg4_A 9 FRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIG 88 (295)
T ss_dssp HHHHHHHSSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTC
T ss_pred HHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCC
T ss_conf 99997179988960688889999999839999994489998774799997747646788889999852047813400256
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 778999999999999725878089951
Q gi|254780669|r 167 QFLSPWEMHNILQKLHAHGAKDVLFCE 193 (301)
Q Consensus 167 q~~s~~e~~~a~eki~~~Gn~~i~lcE 193 (301)
+.-.+..+...+.++.+.|.--|.+=.
T Consensus 89 yG~~~~~v~~tv~~~~~aG~agi~IED 115 (295)
T 1xg4_A 89 FGSSAFNVARTVKSMIKAGAAGLHIED 115 (295)
T ss_dssp SSSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 673116899999999976996787158
No 145
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A*
Probab=51.39 E-value=12 Score=17.04 Aligned_cols=79 Identities=15% Similarity=0.089 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHC
Q ss_conf 99999999999999655339970660155768866632224567124888999886652876885228899998765021
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSV 135 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~v 135 (301)
|-+...+.|+..++.|.+.. .+.=| +.|..+..+.-.+.++++.+..++|++-
T Consensus 76 s~~~~i~~a~~a~~~Gad~~--~~~~P----------~~~~~~~~~~l~~~~~~ia~a~~~pi~i--------------- 128 (293)
T 1w3i_A 76 NLDDAIRLAKLSKDFDIVGI--ASYAP----------YYYPRMSEKHLVKYFKTLCEVSPHPVYL--------------- 128 (293)
T ss_dssp CHHHHHHHHHHGGGSCCSEE--EEECC----------CSCSSCCHHHHHHHHHHHHHHCSSCEEE---------------
T ss_pred CHHHHHHHHHHHHHCCCCEE--ECCCC----------CCCCCCCHHHHHHHHHHHHHHHCCEEEE---------------
T ss_conf 67877888777774496555--04687----------0003588999999999999722553788---------------
Q ss_pred CEEEECHHHCC--CHHHHHHHHHCCCEEEEECC
Q ss_conf 57882257628--99999998505977998367
Q gi|254780669|r 136 DILQIPALLCR--QTDLLTAAAQTGRVINVKKG 166 (301)
Q Consensus 136 DilQIgA~~~r--qtdLl~a~a~t~kpV~iKkg 166 (301)
.++|.+.-. ..+++.++ ...+.+|-.
T Consensus 129 --Yn~P~~~g~~l~~~~~~~l---~~i~giK~s 156 (293)
T 1w3i_A 129 --YNYPTATGKDIDAKVAKEI---GCFTGVKDT 156 (293)
T ss_dssp --EECHHHHSCCCCHHHHHHH---CCEEEEEEC
T ss_pred --ECCCCCCCCCCCHHHHHHC---CCCCCCCCC
T ss_conf --7167535765428888751---565556535
No 146
>2pcq_A Putative dihidrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, structural genomics, NPPSFA; 2.10A {Thermus thermophilus HB8}
Probab=51.29 E-value=12 Score=17.03 Aligned_cols=94 Identities=15% Similarity=0.063 Sum_probs=53.3
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHH
Q ss_conf 99548634999999999999999655339970660155768866632224567124888999886652876885228899
Q gi|254780669|r 47 LIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQ 126 (301)
Q Consensus 47 iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~ 126 (301)
+|+| ++-.|.+...+.|+..++.|.+.. .+.=| +.|....-+.-.+.++++.+. +|++
T Consensus 65 vi~g-v~~~s~~~~i~~a~~a~~~G~d~v--~~~pP----------~~~~~~~~~~l~~~~~~ia~~--~pi~------- 122 (283)
T 2pcq_A 65 FLVG-LMEETLPQAEGALLEAKAAGAMAL--LATPP----------RYYHGSLGAGLLRYYEALAEK--MPLF------- 122 (283)
T ss_dssp CEEE-ECCSSHHHHHHHHHHHHHHTCSEE--EECCC----------CTTGGGTTTHHHHHHHHHHHH--SCEE-------
T ss_pred EEEE-ECCCCHHHHHHHHHHHHHCCCCEE--EECCC----------CCCCCCCHHHHHHHHHHHHHC--CCCC-------
T ss_conf 7999-678756889999888886499879--95586----------224666688899999999702--8863-------
Q ss_pred HHHHHHHHCCEEEECHHHCC--CHHHHHHHHHCCCEEEEECCCCCCHHH
Q ss_conf 99876502157882257628--999999985059779983677789999
Q gi|254780669|r 127 QCEAIADSVDILQIPALLCR--QTDLLTAAAQTGRVINVKKGQFLSPWE 173 (301)
Q Consensus 127 ~~e~~~~~vDilQIgA~~~r--qtdLl~a~a~t~kpV~iKkgq~~s~~e 173 (301)
++++|.+.-. ..+++..+++....|-+|..- .++..
T Consensus 123 ----------~y~~p~~tg~~~~~~~l~~L~~~~~ivgiK~~~-~~~~~ 160 (283)
T 2pcq_A 123 ----------LYHVPQNTKVDLPLEAVEALAPHPNVLGIKDSS-GDLSR 160 (283)
T ss_dssp ----------EEECHHHHCCCCCHHHHHHHTTSTTEEEEEECS-CCHHH
T ss_pred ----------EECCCCCCCCCCCHHHHHHHHHHCCCEEECCCC-CCHHH
T ss_conf ----------230675457787699999997221523303377-89999
No 147
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, PSI-2, protein structure initiative; 2.00A {Caulobacter crescentus CB15}
Probab=51.16 E-value=13 Score=17.02 Aligned_cols=51 Identities=8% Similarity=0.064 Sum_probs=28.8
Q ss_pred HCCCHHHHHHHHHCCCE---EEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 62899999998505977---998367778999999999999725878089951465
Q gi|254780669|r 144 LCRQTDLLTAAAQTGRV---INVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGT 196 (301)
Q Consensus 144 ~~rqtdLl~a~a~t~kp---V~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~ 196 (301)
++++.+-++++.+.+|. .-+-.+..+.-+ +.-++.+...|-.-+-||+-+.
T Consensus 136 ~~~s~~di~~a~~~gkia~~l~iEg~~~l~~~--l~~L~~~y~lGvR~i~Lt~n~~ 189 (417)
T 2rag_A 136 MALTSDDARRIAKAGKKFAFVSMENSWPVGED--LSLVETFYKEGLRMAGPVHFRN 189 (417)
T ss_dssp ECSSHHHHHHHHHTTCEEEEEEEECCGGGTTC--THHHHHHHHTTEEEEESCCSSC
T ss_pred EECCHHHHHHHHHCCCEEEEEEEECCHHHCCC--HHHHHHHHHCCCEEEEECCCCC
T ss_conf 96789999999866995999975261221364--6889999975976998224268
No 148
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein-protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2iyl_D* 2cnw_D* 2j7p_D*
Probab=50.93 E-value=13 Score=16.99 Aligned_cols=157 Identities=15% Similarity=0.184 Sum_probs=98.3
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC-
Q ss_conf 0699954863499999999999999965533997066015576886663222456712488899988665287688522-
Q gi|254780669|r 44 RFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDV- 122 (301)
Q Consensus 44 ~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV- 122 (301)
..+++.||..+---..+-++|..++..+.+ -. =-+.+.||--+.+ -|+...+..|+|+.+.-
T Consensus 103 ~vi~lvG~~G~GKTTt~aKlA~~~~~~~~k---v~----------li~~Dt~R~ga~e----QL~~~a~~~~v~~~~~~~ 165 (304)
T 1rj9_A 103 RVVLVVGVNGVGKTTTIAKLGRYYQNLGKK---VM----------FCAGDTFRAAGGT----QLSEWGKRLSIPVIQGPE 165 (304)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHTTTCC---EE----------EECCCCSSTTTTH----HHHHHHHHHTCCEECCCT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHCCC---CE----------EEECCCCCCHHHH----HHHHHCCCCCCEEEECCC
T ss_conf 699952466777411899999998651154---00----------3421420000678----999856556850796688
Q ss_pred -CCHHHHH-----HH-HHHCCEEEE--CHHHCCCHHHHHHHHHCC---------CE--EEEECCCCCCHHHHHHHHHHHH
Q ss_conf -8899998-----76-502157882--257628999999985059---------77--9983677789999999999997
Q gi|254780669|r 123 -HTEQQCE-----AI-ADSVDILQI--PALLCRQTDLLTAAAQTG---------RV--INVKKGQFLSPWEMHNILQKLH 182 (301)
Q Consensus 123 -~~~~~~e-----~~-~~~vDilQI--gA~~~rqtdLl~a~a~t~---------kp--V~iKkgq~~s~~e~~~a~eki~ 182 (301)
.++..+- .. .+..|++=| +-|+-++.+|+.++.+.. .| +.+==.-....+++..+..+..
T Consensus 166 ~~d~~~~~~~~~~~~~~~~~d~iliDTaGr~~~~~~l~~el~~~~~~~~~~~~~~p~e~~LVl~a~~~~~~~~~~~~~~~ 245 (304)
T 1rj9_A 166 GTDSAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHE 245 (304)
T ss_dssp TCCHHHHHHHHHHHHHHHTCSEEEECCCCCCTTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETTBCTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 72078778999999998699989975043031037788777888877653267898558999611038356779999874
Q ss_pred HCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEEC
Q ss_conf 25878089951465444010000000106888518716871
Q gi|254780669|r 183 AHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFD 223 (301)
Q Consensus 183 ~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D 223 (301)
..|-..+|+|-=-.+--++. .+.++.++++|+.|=
T Consensus 246 ~~~~~~~IlTKlDe~~~~G~------~ls~~~~~~~Pi~~i 280 (304)
T 1rj9_A 246 AVGLTGVIVTKLDGTAKGGV------LIPIVRTLKVPIKFV 280 (304)
T ss_dssp HHCCSEEEEECTTSSCCCTT------HHHHHHHHCCCEEEE
T ss_pred CCCCCEEEEECCCCCCCCCH------HHHHHHHHCCCEEEE
T ss_conf 27997799972468997709------999999989797999
No 149
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthesis, lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=49.76 E-value=13 Score=16.88 Aligned_cols=19 Identities=11% Similarity=0.279 Sum_probs=7.7
Q ss_pred HHHHHHHHHCCCEEEEECC
Q ss_conf 9999998505977998367
Q gi|254780669|r 148 TDLLTAAAQTGRVINVKKG 166 (301)
Q Consensus 148 tdLl~a~a~t~kpV~iKkg 166 (301)
.+++.++++....+-+|..
T Consensus 145 ~~~~~~l~~~~ni~g~K~s 163 (292)
T 2ojp_A 145 PETVGRLAKVKNIIGIXEA 163 (292)
T ss_dssp HHHHHHHHTSTTEEEC-CC
T ss_pred HHHHHHHHCCCCEEEEECC
T ss_conf 8999998379999999567
No 150
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, X-RAY analysis, stability, calorimetry lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=49.72 E-value=13 Score=16.87 Aligned_cols=192 Identities=16% Similarity=0.175 Sum_probs=98.8
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHC-CCCEEEECCCCCCC-----CCCCC-CCCCCCCHHHHHHHHHHHHHHCCEE
Q ss_conf 99954863499999999999999965533-99706601557688-----66632-2245671248889998866528768
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSL-NIGLVYKSSFDKAN-----RSSLA-GKRGVGLKKGREIFRDLKKKYGFPI 118 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~-~~~~ifK~sfdKan-----RtS~~-sfrG~Gle~gL~il~e~k~~~glpv 118 (301)
.+.||= =+.+...++++.+.+ +.++ .+|.=| |-+.|- +++-. -.+|..+++.++++++++++...|+
T Consensus 10 y~~~G~---P~~~~~~~~l~~l~~-g~d~iEiGiPf--sDP~aDGpvIq~a~~~Al~~G~~~~~~~~~~~~~r~~~~~p~ 83 (248)
T 1geq_A 10 YLTAGD---PDKQSTLNFLLALDE-YAGAIELGIPF--SDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPI 83 (248)
T ss_dssp EEETTS---SCHHHHHHHHHHHGG-GBSCEEEECCC--SCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCE
T ss_pred EECCCC---CCHHHHHHHHHHHHC-CCCEEEECCCC--CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCE
T ss_conf 971717---987899999999870-89999978888--886665899999999999779879999999999973469878
Q ss_pred EE-ECCC-------HHHHHHHHH-HCCEEEECHHHCCC-HHHHHHHHHCCCE-EEEECCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 85-2288-------999987650-21578822576289-9999998505977-998367778999999999999725878
Q gi|254780669|r 119 LT-DVHT-------EQQCEAIAD-SVDILQIPALLCRQ-TDLLTAAAQTGRV-INVKKGQFLSPWEMHNILQKLHAHGAK 187 (301)
Q Consensus 119 ~T-eV~~-------~~~~e~~~~-~vDilQIgA~~~rq-tdLl~a~a~t~kp-V~iKkgq~~s~~e~~~a~eki~~~Gn~ 187 (301)
+- --.+ ..-++.+++ .+|-+=||---... .++..++.+.+.. |.+=-+ .|+++ -.+++.+....
T Consensus 84 vlm~Y~N~i~~~G~~~f~~~~~~~Gv~g~iipDlp~ee~~~~~~~~~~~gl~~i~lvsp--tt~~~---ri~~i~~~s~g 158 (248)
T 1geq_A 84 VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAP--NTPDE---RLKVIDDMTTG 158 (248)
T ss_dssp EEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECT--TCCHH---HHHHHHHHCSS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECC--CCHHH---HHHHHHHCCCC
T ss_conf 99806650123579999999986798578605788667666765652169515898578--88199---99877634897
Q ss_pred CEEE-EECCCCCCCHHHCCC--CCCCHHHHHH-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 0899-514654440100000--0010688851-87168711777421223453212638899999999997189889998
Q gi|254780669|r 188 DVLF-CERGTSFGYNTLVTD--MRSIPIMTSM-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE 263 (301)
Q Consensus 188 ~i~l-cERG~~fgy~~lvvD--~~~i~~lk~~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE 263 (301)
=|.+ .-.|+| |-++...+ ...+..+|+. ..||++---=+ .+|-+ +.....++||+.+=
T Consensus 159 fiY~vs~~GvT-G~~~~~~~~~~~~i~~iK~~t~~Pv~vGFGI~-------------t~e~v----~~~~~~~ADGVIVG 220 (248)
T 1geq_A 159 FVYLVSLYGTT-GAREEIPKTAYDLLRRAKRICRNKVAVGFGVS-------------KREHV----VSLLKEGANGVVVG 220 (248)
T ss_dssp EEEEECCC--------CCCHHHHHHHHHHHHHCSSCEEEESCCC-------------SHHHH----HHHHHTTCSEEEEC
T ss_pred EEEEECCCCCC-CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC-------------CHHHH----HHHHHCCCCEEEEC
T ss_conf 17984145557-87754320257788875104678637982469-------------99999----99987489999988
Q ss_pred ECC
Q ss_conf 369
Q gi|254780669|r 264 THQ 266 (301)
Q Consensus 264 ~Hp 266 (301)
++-
T Consensus 221 Sai 223 (248)
T 1geq_A 221 SAL 223 (248)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 899
No 151
>3gz3_A Dihydroorotate dehydrogenase, putative; dhodh, oxidoreductase; HET: FMN ORO; 1.90A {Leishmania major} PDB: 3gye_A*
Probab=49.21 E-value=13 Score=16.82 Aligned_cols=146 Identities=16% Similarity=0.152 Sum_probs=81.1
Q ss_pred CCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC--------------
Q ss_conf 770683578772797699706999548634999999999999999655339970660155768866--------------
Q gi|254780669|r 25 NAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRS-------------- 90 (301)
Q Consensus 25 ~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRt-------------- 90 (301)
+-.+++ -+++|-| |+.+=|||=. .+.|.+.. +.+.| .=..+.|+.++++-+.
T Consensus 36 ~L~~~~----~G~~f~N--Pi~lAAG~~~-k~~e~~~~----~~~~G---~G~vv~kTit~~p~~gn~~PR~~~~~~~~~ 101 (354)
T 3gz3_A 36 SLQVNL----LNNTFAN--PFMNAAGVMC-TTTEELVA----MTESA---SGSLVSKSCTPALREGNPTPRYQALPLGSI 101 (354)
T ss_dssp CCCEEE----TTEEESS--SEEECTTSSC-SSHHHHHH----HHHSS---CSCEEEEEECSSCBCCSCSCCEEEETTEEE
T ss_pred CCEEEE----CCEECCC--CCEECCCCCC-CCHHHHHH----HHHCC---CCEEEECCCCCCCCCCCCCCEEEECCCCHH
T ss_conf 511788----9986599--8886868999-99899999----99749---888995863625346999980897153244
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC---HH------HHHHH-HHHCCEEEEC--H-------HHCCCHHHH
Q ss_conf 6322245671248889998866528768852288---99------99876-5021578822--5-------762899999
Q gi|254780669|r 91 SLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHT---EQ------QCEAI-ADSVDILQIP--A-------LLCRQTDLL 151 (301)
Q Consensus 91 S~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~---~~------~~e~~-~~~vDilQIg--A-------~~~rqtdLl 151 (301)
.-.+|.-.|++.-++.+.+.++....|++--|.- .+ .++.+ .+.+|.+.|- . -+.++.+.+
T Consensus 102 N~~G~~n~G~~~~~~~l~~~~~~~~~pvi~SI~g~~~~e~~~~~~~~~~~~~~~ad~iElNiScPn~~~~~~~~~~~~~~ 181 (354)
T 3gz3_A 102 NSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAM 181 (354)
T ss_dssp ECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEEC-------------CHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHCCCHHHH
T ss_conf 44227786768887766875431478722100267840169999999886315454799965677877720000389999
Q ss_pred ----HHHHH-CCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf ----99850-5977998367778999999999999725
Q gi|254780669|r 152 ----TAAAQ-TGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 152 ----~a~a~-t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
.++.+ +..|+.+|-+.+.+..+...+++.+...
T Consensus 182 ~~i~~~v~~~~~~pv~vKl~~~~~~~~~~~~~~~~~~~ 219 (354)
T 3gz3_A 182 RQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEF 219 (354)
T ss_dssp HHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99998754430265543355545435579999998532
No 152
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=47.94 E-value=14 Score=16.69 Aligned_cols=111 Identities=19% Similarity=0.243 Sum_probs=69.4
Q ss_pred HHHHHHHHHHCCEEEEECCCHHHHH-HHHHHC-----CEEEECHHHCCCHHHHHHHHHCC-CEEEEE---CCCCCCHHHH
Q ss_conf 8999886652876885228899998-765021-----57882257628999999985059-779983---6777899999
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVHTEQQCE-AIADSV-----DILQIPALLCRQTDLLTAAAQTG-RVINVK---KGQFLSPWEM 174 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~~~~~~e-~~~~~v-----DilQIgA~~~rqtdLl~a~a~t~-kpV~iK---kgq~~s~~e~ 174 (301)
+.=+++++.+|.+-.-=+..-..+- .+.... |-+-+|++.|-.+ +.++...| +||.+- .-..+++++.
T Consensus 39 ~fE~~~a~~~~~~~ai~~~Sgt~Al~~al~~l~~~~gdeVi~~~~t~~a~--~~~i~~~G~~pvf~Dvd~~~~~id~~~l 116 (367)
T 3nyt_A 39 ELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVAT--AETVALLGAKPVYVDIDPRTYNLDPQLL 116 (367)
T ss_dssp HHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECBCTTTCSBCGGGT
T ss_pred HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCHHHH
T ss_conf 99999999978595999778999999999980899949998468665368--9999983997999944798688599999
Q ss_pred HHHHHHHHHCCCCCEE-EEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHH
Q ss_conf 9999999725878089-95146544401000000010688-851871687117774
Q gi|254780669|r 175 HNILQKLHAHGAKDVL-FCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSV 228 (301)
Q Consensus 175 ~~a~eki~~~Gn~~i~-lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~ 228 (301)
..+ .+ .+...+ +++ .||+ ..|+..+..+ ++.+++||.|++||.
T Consensus 117 ~~~----it-~~tkaIi~~h---~~G~---~~d~~~I~~~~~~~~i~vIeD~A~a~ 161 (367)
T 3nyt_A 117 EAA----IT-PRTKAIIPVS---LYGQ---CADFDAINAIASKYGIPVIEDAAQSF 161 (367)
T ss_dssp GGG----CC-TTEEEECCBC---GGGC---CCCHHHHHHHHHHTTCCBEEECTTTT
T ss_pred HHH----CC-CCCEEEEEEC---CCCC---HHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 975----58-2673999947---8787---88999999999984986999677778
No 153
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5
Probab=46.47 E-value=15 Score=16.55 Aligned_cols=61 Identities=16% Similarity=0.127 Sum_probs=31.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE----C-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 48634999999999999999655339970660----1-557688666322245671248889998866528
Q gi|254780669|r 50 GPCQIESHDHAFMIAEKLYAICQSLNIGLVYK----S-SFDKANRSSLAGKRGVGLKKGREIFRDLKKKYG 115 (301)
Q Consensus 50 GPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK----~-sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~g 115 (301)
|=+.. ++++....|..++....++...|+-= | +.+...++ +.-.-.+.-..+++++|+.+.
T Consensus 99 ~f~~~-~~~~~~~Fa~~l~~~~~~y~lDGiDiD~Eyp~~~~~~~~~----~~~~~~~~~~~Li~elr~~~p 164 (289)
T 2ebn_A 99 GIANL-STARAKAFAQELKNTCDLYNLDGVFFDDEYSAYQTPPPSG----FVTPSNNAAARLAYETKQAMP 164 (289)
T ss_dssp CTTCB-CHHHHHHHHHHHHHHHHHHTCCEEEEECCSCCCCSSCCTT----BCCCCHHHHHHHHHHHHHHCT
T ss_pred CCCCC-CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHCC
T ss_conf 73558-9999999999999999983997599842257766777778----880678899999999998789
No 154
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics, NPPSFA; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=45.21 E-value=15 Score=16.42 Aligned_cols=78 Identities=15% Similarity=0.321 Sum_probs=47.6
Q ss_pred HHHHHHHHHCCC-EEEEEC----CCCCCHHHHHHHHHHHHHCCCCCEEEEECCC-CCCCHHHCCCCCCCHHH-HHHCCCE
Q ss_conf 999999850597-799836----7778999999999999725878089951465-44401000000010688-8518716
Q gi|254780669|r 148 TDLLTAAAQTGR-VINVKK----GQFLSPWEMHNILQKLHAHGAKDVLFCERGT-SFGYNTLVTDMRSIPIM-TSMGVPV 220 (301)
Q Consensus 148 tdLl~a~a~t~k-pV~iKk----gq~~s~~e~~~a~eki~~~Gn~~i~lcERG~-~fgy~~lvvD~~~i~~l-k~~~~PV 220 (301)
.....++...|. ++.++- ...++++++..+.+.....+...+++++--. .+| + +.|+..+..+ ++++.+|
T Consensus 104 ~s~~~~~~~~g~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~~lv~~~~~~~~~G--~-~~~~~~i~~~~~~~~~~~ 180 (371)
T 2e7j_A 104 YSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYG--N-LPDVKKIAKVCSEYDVPL 180 (371)
T ss_dssp HHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTC--C-CCCHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCC--E-EEHHHHHHHHHCCCEEEE
T ss_conf 9899999986998999845447667769999999987543458808999967889982--5-444775566642542799
Q ss_pred EECHHHHH
Q ss_conf 87117774
Q gi|254780669|r 221 IFDASHSV 228 (301)
Q Consensus 221 i~D~SHs~ 228 (301)
++|.+|+.
T Consensus 181 ~~D~a~~~ 188 (371)
T 2e7j_A 181 LVNGAYAI 188 (371)
T ss_dssp EEECTTTB
T ss_pred EEECCCCC
T ss_conf 99445554
No 155
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=44.59 E-value=7.5 Score=18.50 Aligned_cols=150 Identities=15% Similarity=0.258 Sum_probs=73.8
Q ss_pred CCHHHHHHHHHHHHHHCCEEEEECCCH--HHHHHHHHHC---------------C-EEEECH-----HHCCCH-HHHHHH
Q ss_conf 712488899988665287688522889--9998765021---------------5-788225-----762899-999998
Q gi|254780669|r 99 GLKKGREIFRDLKKKYGFPILTDVHTE--QQCEAIADSV---------------D-ILQIPA-----LLCRQT-DLLTAA 154 (301)
Q Consensus 99 Gle~gL~il~e~k~~~glpv~TeV~~~--~~~e~~~~~v---------------D-ilQIgA-----~~~rqt-dLl~a~ 154 (301)
|...+..+.+.+.+++++||.--.=+. ...+.+...+ + +.-=++ -|.+.| +.++.+
T Consensus 85 g~~~~a~~v~~~a~~~~VPValHLDH~~~~~~~~i~~~idag~~~~~~~~~~gftSVM~D~S~~~~eeNi~~Tk~vve~A 164 (358)
T 1dos_A 85 GAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERM 164 (358)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 78989999999998669988996677752003677778898899999727888860365088677899999999999998
Q ss_pred HHCCCEEEEE------------------CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC-CHH------HCCCCCC
Q ss_conf 5059779983------------------67778999999999999725878089951465444-010------0000001
Q gi|254780669|r 155 AQTGRVINVK------------------KGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFG-YNT------LVTDMRS 209 (301)
Q Consensus 155 a~t~kpV~iK------------------kgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fg-y~~------lvvD~~~ 209 (301)
...|..|=-- ....-.|++....++.+.....-+.+.+==|++.| |.. .-.|+.-
T Consensus 165 h~~gv~VEaElG~igg~ed~~~~~~~~~~~~~T~pe~a~~~~~ef~~~tgvD~LAvaiGt~HG~yk~~~~~l~p~l~~~~ 244 (358)
T 1dos_A 165 SKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDS 244 (358)
T ss_dssp HHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHH
T ss_pred HHHCCEEEECCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 55343478600221566777543344420136887889999998734676516887416523224788767770257999
Q ss_pred CHHHHH-HCCC-----EEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 068885-1871-----687117774212234532126388999999999971898899983
Q gi|254780669|r 210 IPIMTS-MGVP-----VIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 210 i~~lk~-~~~P-----Vi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
+..+++ ...| .++ | |+. |.. ...-+.|+..|+.=+=+-|
T Consensus 245 l~~i~~~~~vp~~~~~LVl---H-----GgS-----Gip---~e~i~~ai~~GV~KiNi~T 289 (358)
T 1dos_A 245 QEYVSKKHNLPHNSLNFVF---H-----GGS-----GST---AQEIKDSVSYGVVKMNIDT 289 (358)
T ss_dssp HHHHHHHHTCCTTCSCEEE---C-----SCT-----TCC---HHHHHHHHHTTEEEEEECH
T ss_pred HHHHHHHHCCCCCCCCEEC---C-----CCC-----CCC---HHHHHHHHHHCEEEHHHCH
T ss_conf 9999997489975322132---6-----999-----999---9999999971603010164
No 156
>2qy9_A Cell division protein FTSY; SRP receptor, protein targeting, simibi class GTPase, cell cycle, GTP-binding, inner membrane, membrane; 1.90A {Escherichia coli} SCOP: a.24.13.1 c.37.1.10 PDB: 1fts_A
Probab=44.25 E-value=16 Score=16.33 Aligned_cols=155 Identities=12% Similarity=0.162 Sum_probs=97.4
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC-
Q ss_conf 6999548634999999999999999655339970660155768866632224567124888999886652876885228-
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVH- 123 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~- 123 (301)
.+++.||..+---..+-++|..++.-+.+. .+ -+.+.||-- +.+-|+...+..|+|+...-.
T Consensus 101 vil~vG~nG~GKTTTiaKLA~~~~~~~~~V---~l----------va~Dt~R~a----A~eQL~~~a~~~~v~~~~~~~~ 163 (309)
T 2qy9_A 101 VILMVGVNGVGKTTTIGKLARQFEQQGKSV---ML----------AAGDTFRAA----AVEQLQVWGQRNNIPVIAQHTG 163 (309)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHTTTCCE---EE----------ECCCTTCHH----HHHHHHHHHHHTTCCEECCSTT
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHCCCCC---EE----------EECCCCCHH----HHHHHHHHHHHCCCCEEECCCC
T ss_conf 999965766676550789999998567761---48----------644530654----9999999875249837733788
Q ss_pred -CHHHHH-----HH-HHHCCEE--EECHHHCCCHHHHHHHHHCCC---------E--EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf -899998-----76-5021578--822576289999999850597---------7--99836777899999999999972
Q gi|254780669|r 124 -TEQQCE-----AI-ADSVDIL--QIPALLCRQTDLLTAAAQTGR---------V--INVKKGQFLSPWEMHNILQKLHA 183 (301)
Q Consensus 124 -~~~~~e-----~~-~~~vDil--QIgA~~~rqtdLl~a~a~t~k---------p--V~iKkgq~~s~~e~~~a~eki~~ 183 (301)
++..+- .+ .+..|++ --..|+-++.+|..++.+..+ | +.+==.-....+.+..+......
T Consensus 164 ~d~~~i~~~~~~~a~~~~~D~vliDTaGR~~~~~~lm~EL~~i~~~~~~~~~~~p~e~~LVlda~~g~~~~~~~~~f~~~ 243 (309)
T 2qy9_A 164 ADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEA 243 (309)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 87999999999999976998999689887767899999999999998753367872456510032337799999862312
Q ss_pred CCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEE
Q ss_conf 587808995146544401000000010688851871687
Q gi|254780669|r 184 HGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIF 222 (301)
Q Consensus 184 ~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~ 222 (301)
.+-..+++|-=-.+--++. .+.+..++++||.|
T Consensus 244 ~~~~g~IlTKlD~t~k~G~------~ls~~~~~~~Pi~f 276 (309)
T 2qy9_A 244 VGLTGITLTKLDGTAKGGV------IFSVADQFGIPIRY 276 (309)
T ss_dssp SCCCEEEEECCTTCTTTTH------HHHHHHHHCCCEEE
T ss_pred CCCCEEEEECCCCCCCCCH------HHHHHHHHCCCEEE
T ss_conf 6887799954347887649------99999998979799
No 157
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=44.06 E-value=16 Score=16.31 Aligned_cols=154 Identities=18% Similarity=0.210 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHCCEE-EEECCCHHHHHHHHH-HCCEEEECHHH---------CCC--H-H---HHHHHHH-CCCE---EE
Q ss_conf 889998866528768-852288999987650-21578822576---------289--9-9---9999850-5977---99
Q gi|254780669|r 104 REIFRDLKKKYGFPI-LTDVHTEQQCEAIAD-SVDILQIPALL---------CRQ--T-D---LLTAAAQ-TGRV---IN 162 (301)
Q Consensus 104 L~il~e~k~~~glpv-~TeV~~~~~~e~~~~-~vDilQIgA~~---------~rq--t-d---Ll~a~a~-t~kp---V~ 162 (301)
+.-|++.|.+ |-|+ .-...|...+..+.+ .+|++=||-=+ .++ . + -.+++.| ...+ +-
T Consensus 6 i~~L~~~K~~-g~ki~~lTayD~~~A~~~d~agiDiilVGDSlg~~~~G~~~T~~vt~d~mi~h~~aV~rga~~~~ii~D 84 (275)
T 1o66_A 6 VNTLQKMKAA-GEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSD 84 (275)
T ss_dssp HHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHC-CCCEEEEECCCHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEC
T ss_conf 9999999747-994899967899999999986998899837605310677677725788887889999704877138946
Q ss_pred EECCCC-CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEE----ECHHHHHHHCCC-CCC
Q ss_conf 836777-89999999999997258780899514654440100000001068885187168----711777421223-453
Q gi|254780669|r 163 VKKGQF-LSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVI----FDASHSVQQPGI-HGN 236 (301)
Q Consensus 163 iKkgq~-~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi----~D~SHs~q~p~~-~~~ 236 (301)
+=-+.+ .+.++.++++.++...|. +.+-||.|.. . ...+..|.+.+.||+ +=|..+.+.-|- ..+
T Consensus 85 mPf~sy~~~~~~~~~~A~~l~~~ga-davk~eg~~~--~------~~~i~~l~~~gIPV~gHiGL~Pq~~~~~GG~r~~g 155 (275)
T 1o66_A 85 LPFGAYQQSKEQAFAAAAELMAAGA-HMVKLEGGVW--M------AETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQG 155 (275)
T ss_dssp CCTTSSSSCHHHHHHHHHHHHHTTC-SEEEEECSGG--G------HHHHHHHHHTTCCEEEEEESCGGGTTC--------
T ss_pred CCHHHCCCHHHHHHHHHHHHHHCCC-CCEECCCHHH--H------HHHHHHHHHCCCCEEEECCCCCEEEECCCCEECCC
T ss_conf 7701022539999999999986485-5113255065--8------99999999879966874046752544058622146
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCH
Q ss_conf 21263889999999999718988999836983
Q gi|254780669|r 237 CSGGERQYIVPLAKAAVAIGIAGIFLETHQDP 268 (301)
Q Consensus 237 ~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P 268 (301)
.+....+ +..-|++=-.+|+-++.+|+=|..
T Consensus 156 k~~e~~~-l~~~ak~lE~AGa~aivlE~Vp~e 186 (275)
T 1o66_A 156 RGGKAQA-LLNDAKAHDDAGAAVVLMECVLAE 186 (275)
T ss_dssp ---CHHH-HHHHHHHHHHTTCSEEEEESCCHH
T ss_pred CHHHHHH-HHHHHHHHHHCCCCEEEECCCCHH
T ss_conf 4156789-999999999667626641036477
No 158
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; structural genomics, PSI, protein structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=43.93 E-value=16 Score=16.29 Aligned_cols=137 Identities=15% Similarity=0.151 Sum_probs=70.2
Q ss_pred HHHHHHHHHHCCEEEEE------------CCCHHHHHHHHH-HCCEEEECHHHCCCH------HHHHHHHHC-CCEEEEE
Q ss_conf 89998866528768852------------288999987650-215788225762899------999998505-9779983
Q gi|254780669|r 105 EIFRDLKKKYGFPILTD------------VHTEQQCEAIAD-SVDILQIPALLCRQT------DLLTAAAQT-GRVINVK 164 (301)
Q Consensus 105 ~il~e~k~~~glpv~Te------------V~~~~~~e~~~~-~vDilQIgA~~~rqt------dLl~a~a~t-~kpV~iK 164 (301)
.-++++++..+.|++-. .....+++...+ .+|++-++......+ ++++.+... ..++.+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 138 (234)
T 1yxy_A 59 RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA 138 (234)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 76999972467663667641566620111004999999997599858998316874335789999999974279966873
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC-HHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHH
Q ss_conf 677789999999999997258780899514654440-1000000010688851871687117774212234532126388
Q gi|254780669|r 165 KGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGY-NTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQ 243 (301)
Q Consensus 165 kgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy-~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~ 243 (301)
. -.++.+.+. ....|..-+...-||..... .....++.-....+....|||.+-- -+.
T Consensus 139 ~--v~t~~~~~~----~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GG---------------I~~ 197 (234)
T 1yxy_A 139 D--ISTFDEGLV----AHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKAGIAVIAEGK---------------IHS 197 (234)
T ss_dssp E--CSSHHHHHH----HHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHTTCCEEEESC---------------CCS
T ss_pred C--CCCHHHHHH----HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECC---------------CCC
T ss_conf 3--799999999----9974999898416446577767741679999987147981898799---------------999
Q ss_pred HHHHHHHHHHHHCCCEEEEEE
Q ss_conf 999999999971898899983
Q gi|254780669|r 244 YIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 244 ~v~~la~aa~a~G~dGlfiE~ 264 (301)
+.-+..++.+|+||+++=+
T Consensus 198 --~~d~~~al~~GAdgV~vGs 216 (234)
T 1yxy_A 198 --PEEAKKINDLGVAGIVVGG 216 (234)
T ss_dssp --HHHHHHHHTTCCSEEEECH
T ss_pred --HHHHHHHHHCCCCEEEECH
T ss_conf --9999999986999999893
No 159
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=43.70 E-value=16 Score=16.27 Aligned_cols=97 Identities=11% Similarity=0.068 Sum_probs=53.9
Q ss_pred HHHHHHHH-CCCEEEEEC------CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCC---HHHHH-HC
Q ss_conf 99999850-597799836------777899999999999972587808995146544401000000010---68885-18
Q gi|254780669|r 149 DLLTAAAQ-TGRVINVKK------GQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSI---PIMTS-MG 217 (301)
Q Consensus 149 dLl~a~a~-t~kpV~iKk------gq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i---~~lk~-~~ 217 (301)
++++++-+ .+.|+.++- ....+.+|+...+..+.+.|.+ .+-+-+|..+........-..+ ...|+ .+
T Consensus 199 Eii~aVr~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~l~~~g~d-~~~~~~g~~~~~~~~~~~~~~~~~~~~ik~~~~ 277 (340)
T 3gr7_A 199 EVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVD-LVDVSSGAIVPARMNVYPGYQVPFAELIRREAD 277 (340)
T ss_dssp HHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCC-EEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 9999999872887610203444458988789999999999864755-364322401266567788631379999999749
Q ss_pred CCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEE
Q ss_conf 716871177742122345321263889999999999718-9889998
Q gi|254780669|r 218 VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIG-IAGIFLE 263 (301)
Q Consensus 218 ~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G-~dGlfiE 263 (301)
.||+.-- +-++ +..|..+++.| +|.+.+-
T Consensus 278 ~pvi~~G---------------~i~~--~~~ae~~l~~g~aD~V~~g 307 (340)
T 3gr7_A 278 IPTGAVG---------------LITS--GWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp CCEEEES---------------SCCC--HHHHHHHHHTTSCSEEEEC
T ss_pred CCEEEEC---------------CCCC--HHHHHHHHHCCCCCHHHHH
T ss_conf 8689972---------------7599--9999999987994135878
No 160
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (mtsase); 1.90A {Sulfolobus tokodaii str}
Probab=43.41 E-value=16 Score=16.24 Aligned_cols=63 Identities=14% Similarity=0.183 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHCC-CCEEEECC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC
Q ss_conf 999999999999655339-97066015------576886663222456712488899988665287688522
Q gi|254780669|r 58 DHAFMIAEKLYAICQSLN-IGLVYKSS------FDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDV 122 (301)
Q Consensus 58 e~~~~~A~~lk~~~~~~~-~~~ifK~s------fdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV 122 (301)
+-+.+....|+++|.... ..=+|++. ||-.+=++++.- .|-++.++-|-+.-.+.||.|+-|+
T Consensus 15 ~gi~~kLdYLk~LGVtaIwLSPI~~a~pgS~HGYDv~Dy~~IdP~--fGt~edf~~Lv~aaH~rGIkVIlDi 84 (704)
T 3hje_A 15 SEIRNRLDYFVELGVTHLYLSPVLKARPGSTHGYDVVDYNTINDE--LGGEEEYIRLIDEAKSKGLGIIQDI 84 (704)
T ss_dssp HHHHTTHHHHHHHTCSEEEECCCEEESTTCSSSCSEEEEEEECGG--GTHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH--CCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 999983479987699989968123599999989046172123053--3999999999999998899899997
No 161
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=43.14 E-value=17 Score=16.22 Aligned_cols=152 Identities=14% Similarity=0.122 Sum_probs=81.3
Q ss_pred HHHHHHHHHHCCEEEEECCCHHHHHHHHH-HCCEEEECHHHC-------------CCHHHHHHHHH----CCCEEEE--E
Q ss_conf 89998866528768852288999987650-215788225762-------------89999999850----5977998--3
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVHTEQQCEAIAD-SVDILQIPALLC-------------RQTDLLTAAAQ----TGRVINV--K 164 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~~~~~~e~~~~-~vDilQIgA~~~-------------rqtdLl~a~a~----t~kpV~i--K 164 (301)
..|+++.+.=+.-++-.++|.-.+..+.+ ..+.++++.... --++++..+.+ ++.||.+ -
T Consensus 11 ~~fr~l~~~~~~~~~p~v~Da~SAri~e~aGf~a~~~sg~~~~~s~lG~pD~~~~t~~e~~~~v~~I~~~~~~PvivD~d 90 (287)
T 3b8i_A 11 AMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADAD 90 (287)
T ss_dssp HHHHHHHHSSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECT
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCC
T ss_conf 99999970899589606768999999998599989475899999738999888787899999998664047866585265
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CCCCHHHCCCCCCCHHH-------HH-H---CCCEEECHHHHHHHC
Q ss_conf 67778999999999999725878089951465--44401000000010688-------85-1---871687117774212
Q gi|254780669|r 165 KGQFLSPWEMHNILQKLHAHGAKDVLFCERGT--SFGYNTLVTDMRSIPIM-------TS-M---GVPVIFDASHSVQQP 231 (301)
Q Consensus 165 kgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~--~fgy~~lvvD~~~i~~l-------k~-~---~~PVi~D~SHs~q~p 231 (301)
.|+. ++.+....+..+...|.--+.+=..-. .++... .+...+..+ .. . ++-++-. |-+
T Consensus 91 ~Gyg-~~~~~~~~v~~~~~aGaagi~iED~~~~k~~~~~~--~~~~~~~~~~~ki~aa~~a~~~~~~~i~aR-tda---- 162 (287)
T 3b8i_A 91 HGYG-NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKS--TDLICVEEGVGKIRAALEARVDPALTIIAR-TNA---- 162 (287)
T ss_dssp TCSS-SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCT--TCBCCHHHHHHHHHHHHHHCCSTTSEEEEE-EET----
T ss_pred CCCC-CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCHHHEEEC-CCC----
T ss_conf 4444-31899999999997577667864367755566556--555589999777888887303421111104-433----
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Q ss_conf 234532126388999999999971898899983698334
Q gi|254780669|r 232 GIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDN 270 (301)
Q Consensus 232 ~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~ 270 (301)
...|--+. ..=+++-..+|+|++|+|.=++++.
T Consensus 163 -----~~~g~deA-I~Ra~ay~eAGAD~ifi~~~~~~e~ 195 (287)
T 3b8i_A 163 -----ELIDVDAV-IQRTLAYQEAGADGICLVGVRDFAH 195 (287)
T ss_dssp -----TTSCHHHH-HHHHHHHHHTTCSEEEEECCCSHHH
T ss_pred -----CCCCHHHH-HHHHHHHHHCCCCEEEECCCCCHHH
T ss_conf -----32699999-9999999863998897327799999
No 162
>1xx6_A Thymidine kinase; X-RAY, NESG, northeast structural genomics consortium, protein structure initiative, PSI; HET: ADP; 2.00A {Clostridium acetobutylicum atcc 824} SCOP: c.37.1.24 g.39.1.14
Probab=42.89 E-value=17 Score=16.19 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=32.9
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf 0699954863499999999999999965533997066015576886663
Q gi|254780669|r 44 RFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSL 92 (301)
Q Consensus 44 ~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~ 92 (301)
.|-+|.||------..+++.+...+..+.+ -.+|||+.|. |.+.
T Consensus 9 ~l~lI~GpMfSGKTteLl~~~~~~~~~~~~---vl~ik~~~D~--R~~~ 52 (191)
T 1xx6_A 9 WVEVIVGPMYSGKSEELIRRIRRAKIAKQK---IQVFKPEIDN--RYSK 52 (191)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCC---EEEEEEC---------
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCE---EEEEEEEEEE--ECCC
T ss_conf 699999150778999999999999987995---9999686305--8799
No 163
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=42.81 E-value=17 Score=16.18 Aligned_cols=17 Identities=24% Similarity=0.323 Sum_probs=8.2
Q ss_pred HHHHCCCEEEEEECCCH
Q ss_conf 99718988999836983
Q gi|254780669|r 252 AVAIGIAGIFLETHQDP 268 (301)
Q Consensus 252 a~a~G~dGlfiE~Hp~P 268 (301)
+...|.+=..+|-++.+
T Consensus 392 lA~~G~~Vtl~Ek~~~l 408 (671)
T 1ps9_A 392 AAARGHQVTLFDAHSEI 408 (671)
T ss_dssp HHTTTCEEEEEESSSSS
T ss_pred HHHHHCCCEEEEECCCC
T ss_conf 98752564078305667
No 164
>3ez4_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; cytoplasm, magnesium, metal-binding, pantothenate biosynthesis; 2.10A {Burkholderia pseudomallei}
Probab=42.53 E-value=17 Score=16.16 Aligned_cols=156 Identities=17% Similarity=0.150 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHCCEE-EEECCCHHHHHHHHH-HCCEEEECHHHC------CCH---------HHHHHHHHCC----CEE
Q ss_conf 8889998866528768-852288999987650-215788225762------899---------9999985059----779
Q gi|254780669|r 103 GREIFRDLKKKYGFPI-LTDVHTEQQCEAIAD-SVDILQIPALLC------RQT---------DLLTAAAQTG----RVI 161 (301)
Q Consensus 103 gL~il~e~k~~~glpv-~TeV~~~~~~e~~~~-~vDilQIgA~~~------rqt---------dLl~a~a~t~----kpV 161 (301)
.+.-|++.|++ |-|+ .....|...+..+.+ .+|++=+|-=+- .+| .-.+++.|-- ..+
T Consensus 11 Ti~~l~~~K~~-g~ki~~lTayD~~~A~~~~~agiDiiLVGDSlgmv~~G~~~T~~vtld~m~~h~~aV~rga~~~~vv~ 89 (269)
T 3ez4_A 11 TVPKLQAMREA-GEKIAMLTSYDASFAALLDRANVDVQLIGDSLGNVLQGQATTLPVTLDDIAYHTACVARAQPRGLVVA 89 (269)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEE
T ss_pred EHHHHHHHHHC-CCCEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 79999999858-99589997989999999987799899994778873178878751573557789999983388700783
Q ss_pred EEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEEC----HHHHHHHCC-CCCC
Q ss_conf 98367778999999999999725878089951465444010000000106888518716871----177742122-3453
Q gi|254780669|r 162 NVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFD----ASHSVQQPG-IHGN 236 (301)
Q Consensus 162 ~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D----~SHs~q~p~-~~~~ 236 (301)
-+--+.+.+.++-+..+-++...|. +.+-||.|.. + ...+..|.+.+.||+-- |....+.-| -..+
T Consensus 90 DmPf~sy~~~~~a~~~a~~l~~~GA-daVKlEgg~~--~------~~~I~~L~~~GIPV~gHiGLtPQ~~~~~GG~k~qG 160 (269)
T 3ez4_A 90 DLPFGTYGTPADAFASAVKLMRAGA-QMVKLEGGEW--L------AETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQG 160 (269)
T ss_dssp ECCTTSCSSHHHHHHHHHHHHHHTC-SEEEEECSGG--G------HHHHHHHHHTTCCEEEEEC----------------
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCC-CEEEECCCHH--H------HHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCC
T ss_conf 7884034555999999999995499-9898356366--9------99999999889938874046725554338863227
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCH
Q ss_conf 21263889999999999718988999836983
Q gi|254780669|r 237 CSGGERQYIVPLAKAAVAIGIAGIFLETHQDP 268 (301)
Q Consensus 237 ~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P 268 (301)
.+.-...-+..-|++--.+|+-++.+|+=|..
T Consensus 161 kt~~ea~~ll~dA~~le~AGaf~ivlE~Vp~~ 192 (269)
T 3ez4_A 161 KTEAGAAQLLRDARAVEEAGAQLIVLEAVPTL 192 (269)
T ss_dssp ----CHHHHHHHHHHHHHHTCSEEEEESCCHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEECCCCHH
T ss_conf 89999999999999998602227764267577
No 165
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=41.79 E-value=17 Score=16.08 Aligned_cols=156 Identities=12% Similarity=0.163 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 48889998866528768852288999987650-21578822576289999999850597799836777899999999999
Q gi|254780669|r 102 KGREIFRDLKKKYGFPILTDVHTEQQCEAIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQK 180 (301)
Q Consensus 102 ~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~ek 180 (301)
.+-+.|.++-++-..-..--++++-++-.+.+ ..+.+.+.-+-|-.. ...+..+.|= --..+..++...+++
T Consensus 52 ~~a~kL~~lL~~~~~v~~~Ga~d~~~A~~~~~aGf~aiYlSG~~vaa~---~~~s~~g~PD----~gl~~~~ev~~~v~~ 124 (429)
T 1f8m_A 52 RGAEVLWEQLHDLEWVNALGALTGNMAVQQVRAGLKAIYLSGWQVAGD---ANLSGHTYPD----QSLYPANSVPQVVRR 124 (429)
T ss_dssp HHHHHHHHHHHHSSCEEEEBCCSHHHHHHHHHTTCSCEEECHHHHHHH---CCTTCCCCCS----SSCSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCEEEECHHHHHCC---CCCCCCCCCC----CCCCCHHHHHHHHHH
T ss_conf 999999999716996873376788999999994998899660988543---2345689887----454655669999999
Q ss_pred HHHCCCC-CEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 9725878-089951465444010000000106888518716871177742122345321263889999999999718988
Q gi|254780669|r 181 LHAHGAK-DVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAG 259 (301)
Q Consensus 181 i~~~Gn~-~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dG 259 (301)
|...=.. +-+..++|.+ -...+.+|||.|+-..- |...-|-.+.+.-+.+|+.|
T Consensus 125 I~~a~~~~d~~~~~~~~~--------------~~~~~~~PIIaDaDtGf-----------G~~~nv~rtvk~~i~AGaAg 179 (429)
T 1f8m_A 125 INNALQRADQIAKIEGDT--------------SVENWLAPIVADGEAGF-----------GGALNVYELQKALIAAGVAG 179 (429)
T ss_dssp HHHHHHHHHHHHHHHTCC--------------SCSCSSCCEEEECTTTT-----------SSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHCCC--------------CCCCCCCCEEECCCCCC-----------CCHHHHHHHHHHHHHCCCCE
T ss_conf 999999999998740566--------------54235676442167778-----------84999999999999809949
Q ss_pred EEEEECCCH--HHCCCCCCCCCCHHHHHHHHH
Q ss_conf 999836983--347978201868899999999
Q gi|254780669|r 260 IFLETHQDP--DNAPSDGPNMINIKDLPKLLS 289 (301)
Q Consensus 260 lfiE~Hp~P--~~AlsD~~q~l~l~~l~~ll~ 289 (301)
+.||=---| ...--+|..-++.+++-.-|+
T Consensus 180 ihiEDQv~~~KkCGH~~GK~lVp~~e~i~ki~ 211 (429)
T 1f8m_A 180 SHWEDQLASEKKCGHLGGKVLIPTQQHIRTLT 211 (429)
T ss_dssp EEEECBCGGGCCCTTSSCCEECCHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98625686234454568864057999999999
No 166
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=41.63 E-value=17 Score=16.07 Aligned_cols=110 Identities=14% Similarity=0.156 Sum_probs=77.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--CCEE-EEECCCHHHHH
Q ss_conf 34999999999999999655339970660155768866632224567124888999886652--8768-85228899998
Q gi|254780669|r 53 QIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY--GFPI-LTDVHTEQQCE 129 (301)
Q Consensus 53 siES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~--glpv-~TeV~~~~~~e 129 (301)
...+.++...+++.+.+-|.++. - -.+|.+ .+++.++++++.+ ++-+ +--|.+.+|++
T Consensus 17 r~~~~~~a~~~~~al~~~Gi~~i-----E-----------itl~~p---~a~~~I~~l~~~~~~~~~vGaGTV~~~~~~~ 77 (205)
T 1wa3_A 17 RANSVEEAKEKALAVFEGGVHLI-----E-----------ITFTVP---DADTVIKELSFLKEKGAIIGAGTVTSVEQCR 77 (205)
T ss_dssp CCSSHHHHHHHHHHHHHTTCCEE-----E-----------EETTST---THHHHHHHTHHHHHTTCEEEEESCCSHHHHH
T ss_pred ECCCHHHHHHHHHHHHHCCCCEE-----E-----------EECCCC---CHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
T ss_conf 79899999999999998799889-----9-----------968997---6899999999731898289630001278899
Q ss_pred HHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 7650-2157882257628999999985059779983677789999999999997258780899
Q gi|254780669|r 130 AIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 130 ~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
.+.+ .+|.+=-|. .+.++++.+.+.+.|+. +=.+||.|...|.+ .|.+-+-+
T Consensus 78 ~a~~aGa~fivsP~---~~~~v~~~~~~~~~~~i---PGv~TptEi~~A~~----~G~~~vK~ 130 (205)
T 1wa3_A 78 KAVESGAEFIVSPH---LDEEISQFCKEKGVFYM---PGVMTPTELVKAMK----LGHTILKL 130 (205)
T ss_dssp HHHHHTCSEEECSS---CCHHHHHHHHHHTCEEE---CEECSHHHHHHHHH----TTCCEEEE
T ss_pred HHHHCCCCEEECCC---CCHHHHHHHHHCCCCCC---CCCCCCHHHHHHHH----CCCCEEEE
T ss_conf 99864874886799---99999999998399822---77487158999997----69997974
No 167
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=41.50 E-value=18 Score=16.05 Aligned_cols=93 Identities=15% Similarity=0.106 Sum_probs=47.9
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 69995486349999999999999996553399706601557688666322245671248889998866528768852288
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHT 124 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~ 124 (301)
..+|+| |+-.|-+...+.|+..++.|.+. ...-| |+.+. +..++-+++++++.+..++|++-
T Consensus 86 ~~vi~g-~~~~s~~~~i~~a~~a~~~Gad~---i~v~p---------P~~~~-~~~~~i~~~~~~v~~a~~~pi~~---- 147 (304)
T 3cpr_A 86 AKLIAG-VGTNNTRTSVELAEAAASAGADG---LLVVT---------PYYSK-PSQEGLLAHFGAIAAATEVPICL---- 147 (304)
T ss_dssp SEEEEE-CCCSCHHHHHHHHHHHHHTTCSE---EEEEC---------CCSSC-CCHHHHHHHHHHHHHHCCSCEEE----
T ss_pred CCEEEE-CCCCHHHHHHHHHHHHHHCCCCE---EEECC---------CCCCC-CCHHHHHHHHHHHHHHCCCCEEE----
T ss_conf 767862-57412999999999999739999---99889---------87789-89999999999999735997677----
Q ss_pred HHHHHHHHHHCCEEEECHHHCC--CHHHHHHHHHCCCEEEEECCCC
Q ss_conf 9999876502157882257628--9999999850597799836777
Q gi|254780669|r 125 EQQCEAIADSVDILQIPALLCR--QTDLLTAAAQTGRVINVKKGQF 168 (301)
Q Consensus 125 ~~~~e~~~~~vDilQIgA~~~r--qtdLl~a~a~t~kpV~iKkgq~ 168 (301)
.+.|.+.-+ -.+++.++++....+-+|....
T Consensus 148 -------------y~~p~~~g~~l~~~~~~~l~~~~~i~~iK~~~~ 180 (304)
T 3cpr_A 148 -------------YDIPGRSGIPIESDTMRRLSELPTILAVXDAKG 180 (304)
T ss_dssp -------------EECHHHHSSCCCHHHHHHHTTSTTEEEEEECSC
T ss_pred -------------EECCCCCCCCCCHHHHHHHHCCCCEEEEECCCC
T ss_conf -------------635543488888999999853899678515876
No 168
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=41.29 E-value=18 Score=16.03 Aligned_cols=52 Identities=6% Similarity=-0.066 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH-HHHHHHHHHHCCEEEE
Q ss_conf 9999999999999965533997066015576886663222456712488-8999886652876885
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGR-EIFRDLKKKYGFPILT 120 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL-~il~e~k~~~glpv~T 120 (301)
|.+.+.+.++..++.|.. ++.= ..|+.|.... ++++ ++++++.+..++|++-
T Consensus 76 ~t~~~~~~~~~a~~~G~d----~~~~--------~~P~y~~~~~-~~~i~~~~~~ia~~~~~pi~i 128 (288)
T 2nuw_A 76 NLNDVMELVKFSNEMDIL----GVSS--------HSPYYFPRLP-EKFLAKYYEEIARISSHSLYI 128 (288)
T ss_dssp CHHHHHHHHHHHHTSCCS----EEEE--------CCCCSSCSCC-HHHHHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHHHHHHHHHHC----CCCC--------CCCCCCCCHH-HHHHHHHHHHHHHCCCCCCCC
T ss_conf 089999999988775402----1310--------4774323112-788999999985413798542
No 169
>1pcf_A P15, transcriptional coactivator PC4; transcriptional cofactor, ssDNA binding, nuclear protein; 1.74A {Homo sapiens} SCOP: d.18.1.1 PDB: 2c62_A 2phe_A
Probab=41.26 E-value=17 Score=16.14 Aligned_cols=26 Identities=23% Similarity=0.313 Sum_probs=19.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 01868899999999999999988519
Q gi|254780669|r 276 PNMINIKDLPKLLSQLLAIDKIIKPL 301 (301)
Q Consensus 276 ~q~l~l~~l~~ll~~l~~i~~~vk~l 301 (301)
.-+|++++++.|.+.+-.|+++++.|
T Consensus 41 GIsL~~eqw~~l~~~~~~i~~ai~~l 66 (66)
T 1pcf_A 41 GISLNPEQWSQLKEQISDIDDAVRKL 66 (66)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECHHHHHHHHHHHHHHHHHHHHC
T ss_conf 48867999999998799999999839
No 170
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=40.92 E-value=18 Score=16.00 Aligned_cols=136 Identities=17% Similarity=0.194 Sum_probs=63.4
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC-CCCCCCC-HHHHHHHHHHHHHHCCEEEEEC
Q ss_conf 6999548634999999999999999655339970660155768866632-2245671-2488899988665287688522
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLA-GKRGVGL-KKGREIFRDLKKKYGFPILTDV 122 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~-sfrG~Gl-e~gL~il~e~k~~~glpv~TeV 122 (301)
++=+-|...+|+. ++..+.+++.|..+ .-.+|-..|.-.-. ..+..|| +-|.+..+++- +.|+- -|+
T Consensus 89 ~l~~Eg~~~l~~d---l~~l~~~y~lGvR~-----~~LT~n~~N~~g~g~~~~~~GLT~fG~~vV~emn-~lGmi--iDl 157 (325)
T 2i5g_A 89 LYGFQNAHAFEDQ---IGYVEVFKQLGVGI-----VQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMN-RVGIM--CDL 157 (325)
T ss_dssp EEEESCGGGGTTC---THHHHHHHHTTEEE-----EESCCSSBCSSCBBTTSCCCCCCHHHHHHHHHHH-HHTCE--EEC
T ss_pred EEECCCCCCCCCC---HHHHHHHHHCCCEE-----EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HCCEE--EEC
T ss_conf 9806783011687---89999999737608-----9830489998777886789997666799999999-75938--985
Q ss_pred CCHHH--HHHHHHHCC--EE--EECHH-HC---CC--HHHHHHHHHCCCEEEE-------ECCCCCCHHHHHHHHHHHH-
Q ss_conf 88999--987650215--78--82257-62---89--9999998505977998-------3677789999999999997-
Q gi|254780669|r 123 HTEQQ--CEAIADSVD--IL--QIPAL-LC---RQ--TDLLTAAAQTGRVINV-------KKGQFLSPWEMHNILQKLH- 182 (301)
Q Consensus 123 ~~~~~--~e~~~~~vD--il--QIgA~-~~---rq--tdLl~a~a~t~kpV~i-------Kkgq~~s~~e~~~a~eki~- 182 (301)
.+... ...+.+... ++ --.+| +| || -+.|++++++|-.|-+ +.+.-.+++++.-.++|+.
T Consensus 158 SH~s~~t~~d~i~~S~~Pvi~SHS~~ral~~h~RNl~De~lraia~~GGvIGi~~~~~~l~~~~~~t~~~~~~hi~~~~~ 237 (325)
T 2i5g_A 158 SHVGSKTSEEVILESKKPVCYSHCLPSGLKEHPRNKSDEELKFIADHGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMN 237 (325)
T ss_dssp TTBCHHHHHHHHHHCSSCCEEEEECBTTTCCCTTSBCHHHHHHHHHTTCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 88988999999841269768861353135677788989999999984986845147104338864449999999999997
Q ss_pred HCCCCCEEE
Q ss_conf 258780899
Q gi|254780669|r 183 AHGAKDVLF 191 (301)
Q Consensus 183 ~~Gn~~i~l 191 (301)
-.|-+.|-+
T Consensus 238 l~G~dhVgi 246 (325)
T 2i5g_A 238 IVGEDAIGI 246 (325)
T ss_dssp HHCTTSEEE
T ss_pred HCCCCCEEE
T ss_conf 548511576
No 171
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, cytoplasm; 2.00A {Neisseria meningitidis serogroup B}
Probab=40.37 E-value=18 Score=15.94 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=57.1
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCH
Q ss_conf 99954863499999999999999965533997066015576886663222456712488899988665287688522889
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTE 125 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~ 125 (301)
.+|+|-. -.|.+.+.+.|+..++.|.+.. ..-| |+.|+ +.-++-++.++++.+..++|++-
T Consensus 78 ~vi~gv~-~~s~~~~i~~a~~a~~~Gad~v---~v~p---------P~~~~-~s~~~i~~~~~~i~~a~~~pi~l----- 138 (297)
T 3flu_A 78 PVIAGTG-ANNTVEAIALSQAAEKAGADYT---LSVV---------PYYNK-PSQEGIYQHFKTIAEATSIPMII----- 138 (297)
T ss_dssp CEEEECC-CSSHHHHHHHHHHHHHTTCSEE---EEEC---------CCSSC-CCHHHHHHHHHHHHHHCCSCEEE-----
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHHCCCCCC---EECC---------CCCCC-CCHHHHHHHHHHHHHCCCCCEEE-----
T ss_conf 5456767-5639999999999998299875---6258---------87889-89999999999998547998899-----
Q ss_pred HHHHHHHHHCCEEEECHH--HCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 999876502157882257--6289999999850597799836777899999999999972587808995
Q gi|254780669|r 126 QQCEAIADSVDILQIPAL--LCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 126 ~~~e~~~~~vDilQIgA~--~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
.+.|.+ ..-..+++..+++....+-+|-. ..+...+.. -+...+.+=.+++
T Consensus 139 ------------Yn~P~~~g~~l~~e~l~~L~~~pni~giK~~-~~d~~~~~~---~~~~~~~~~~v~~ 191 (297)
T 3flu_A 139 ------------YNVPGRTVVSMTNDTILRLAEIPNIVGVKEA-SGNIGSNIE---LINRAPEGFVVLS 191 (297)
T ss_dssp ------------EECHHHHSSCCCHHHHHHHTTSTTEEEEEEC-SCCHHHHHH---HHHHSCTTCEEEE
T ss_pred ------------EECCCCCCCCCCHHHHHHHHCCCCEEEEECC-CCCHHHHHH---HHHHCCCCEEEEC
T ss_conf ------------9788644778999999998658998888548-899999999---9997699847835
No 172
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, coenzyme A, transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=40.09 E-value=18 Score=15.91 Aligned_cols=138 Identities=15% Similarity=0.111 Sum_probs=77.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHH-----HHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEE
Q ss_conf 663222456712488899988665287688522889999876-----502157882257628999999985059779983
Q gi|254780669|r 90 SSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAI-----ADSVDILQIPALLCRQTDLLTAAAQTGRVINVK 164 (301)
Q Consensus 90 tS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~-----~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iK 164 (301)
++..-+.|.- +.-.+.-+++.+-+|.+-.-=+..-.++... ...-|++-... ++ ...+...+...... +.
T Consensus 80 ~~sr~~~g~~-~~~~~lE~~la~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~d~-~~-h~s~~~G~~~~~a~--~~ 154 (401)
T 1fc4_A 80 ASVRFICGTQ-DSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDA-LN-HASIIDGVRLCKAK--RY 154 (401)
T ss_dssp CSCHHHHCCB-HHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEET-TC-CHHHHHHHHTSCSE--EE
T ss_pred CCCCCCCCCC-HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECC-CC-CHHHHHHHHHCCCC--EE
T ss_conf 5225434894-89999999999862897478754327889999997626898999848-65-39998324204875--79
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHH-HHCCCEEECHHHHHHHCCC
Q ss_conf 67778999999999999725878089951465444010000000106888-5187168711777421223
Q gi|254780669|r 165 KGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMT-SMGVPVIFDASHSVQQPGI 233 (301)
Q Consensus 165 kgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk-~~~~PVi~D~SHs~q~p~~ 233 (301)
+-.+...+++....+.........++++.-|+..-..+ +.|+..+..++ +++..+++|-+|+.-..|.
T Consensus 155 ~~~h~D~~~l~~~~~~~~~~~~~~~~vv~egv~s~~G~-~~~L~~i~~l~~~~~~~LivDeah~~g~~g~ 223 (401)
T 1fc4_A 155 RYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGV-IANLKGVCDLADKYDALVMVDDSHAVGFVGE 223 (401)
T ss_dssp EECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTE-ECCHHHHHHHHHHTTEEEEEECTTTTTTSST
T ss_pred EECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-CHHHHHHHHHHHHHCEEEEEECCCCCCCCCC
T ss_conf 96889999999999973433576289997787679996-3447999999998492898503211361368
No 173
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensation, amino-acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=39.20 E-value=19 Score=15.82 Aligned_cols=174 Identities=13% Similarity=0.102 Sum_probs=99.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHCCEEEEE-CCCHHHHH
Q ss_conf 6349999999999999996553399706601557688666322245671248889998866-528768852-28899998
Q gi|254780669|r 52 CQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKK-KYGFPILTD-VHTEQQCE 129 (301)
Q Consensus 52 CsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~-~~glpv~Te-V~~~~~~e 129 (301)
..-=|.++.+++++.|.++|.+..=.| |+ ++|+..+ +..+.+.+ .....+++- ......++
T Consensus 55 g~~fs~e~K~~i~~~L~~~GV~~IEvG-----~p---~~~~~~~---------~~~~~i~~~~~~~~~~~~~r~~~~d~~ 117 (423)
T 3ivs_A 55 NAFFDTEKKIQIAKALDNFGVDYIELT-----SP---VASEQSR---------QDCEAICKLGLKCKILTHIRCHMDDAR 117 (423)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCSEEEEC-----CT---TSCHHHH---------HHHHHHHTSCCSSEEEEEEESCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEE-----CC---CCCHHHH---------HHHHHHHHHCCHHHHHHHHHCCHHHHH
T ss_conf 999899999999999998197989996-----68---4783679---------999999870460353554643807699
Q ss_pred HHHH-HCCEEEECH-----HHCCC------------HHHHHHHHHCCCE--EEEECCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 7650-215788225-----76289------------9999998505977--99836777899999999999972587808
Q gi|254780669|r 130 AIAD-SVDILQIPA-----LLCRQ------------TDLLTAAAQTGRV--INVKKGQFLSPWEMHNILQKLHAHGAKDV 189 (301)
Q Consensus 130 ~~~~-~vDilQIgA-----~~~rq------------tdLl~a~a~t~kp--V~iKkgq~~s~~e~~~a~eki~~~Gn~~i 189 (301)
.+.+ .+|.+.+-. ++..+ .+.+..+.+.|.. +++-.....+++.+...++.+...|.+.|
T Consensus 118 ~a~~~g~~~v~i~~~~s~~~~~~~~~~~~~~~l~~~~~~v~~ak~~G~~V~~~~ed~~~~~~~~l~~~~~~~~~~Gad~i 197 (423)
T 3ivs_A 118 VAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRV 197 (423)
T ss_dssp HHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEE
T ss_pred HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 99986989689985452999999862129999999999998875058611120144557768999999988761398713
Q ss_pred EEEECCCCCCCHHHCCCC-CCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
Q ss_conf 995146544401000000-01068885-187168711777421223453212638899999999997189889
Q gi|254780669|r 190 LFCERGTSFGYNTLVTDM-RSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGI 260 (301)
Q Consensus 190 ~lcERG~~fgy~~lvvD~-~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGl 260 (301)
.+|.- +|+-+- .++ +-+-.+++ ...|+-+- .| -++.+...-+.+|+.+|++-+
T Consensus 198 ~laDT---~G~~~P-~~v~~~i~~l~~~~~~~lg~H-~H-------------Nd~GlA~ANslaAi~aGa~~v 252 (423)
T 3ivs_A 198 GIADT---VGCATP-RQVYDLIRTLRGVVSCDIECH-FH-------------NDTGMAIANAYCALEAGATHI 252 (423)
T ss_dssp EEEET---TSCCCH-HHHHHHHHHHHHHCSSEEEEE-EB-------------CTTSCHHHHHHHHHHTTCCEE
T ss_pred CCCCC---CCCCCC-HHHHEEEEECCCCCCCCEEEE-EC-------------CCCCCHHHHHHHHHHHCCCCC
T ss_conf 54565---466273-000001331146655524898-78-------------985609999999999599721
No 174
>1nqk_A Alkanesulfonate monooxygenase; structural genomics, beta barrel, PSI, protein structure initiative, midwest center for structural genomics; 2.20A {Escherichia coli} SCOP: c.1.16.4 PDB: 1m41_A
Probab=38.81 E-value=19 Score=15.78 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=19.4
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 12638899999999997189889998
Q gi|254780669|r 238 SGGERQYIVPLAKAAVAIGIAGIFLE 263 (301)
Q Consensus 238 ~gG~r~~v~~la~aa~a~G~dGlfiE 263 (301)
.-|..+-|....++=..+|+|++++-
T Consensus 305 lvGtpe~V~e~L~~~~d~Gvd~~~L~ 330 (381)
T 1nqk_A 305 LVGDGPTVAARINEYAALGIDSFVLS 330 (381)
T ss_dssp EEEEHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEECHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 89889999999999997199989992
No 175
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=38.44 E-value=20 Score=15.75 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=72.1
Q ss_pred EEEEECCC-----------------CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 69995486-----------------3499999999999999965533997066015576886663222456712488899
Q gi|254780669|r 45 FVLIAGPC-----------------QIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIF 107 (301)
Q Consensus 45 l~iIAGPC-----------------siES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il 107 (301)
-.+.+||| +++|.+.+.++++.-... .+..-..+...-+ .....|--|...++..+++
T Consensus 107 ~Iif~gp~Ks~~~l~~A~~~Gv~~~~~Ds~~eL~~i~~~~~~~----~v~~rI~~~~~~~-~~~~~sKFGi~~~~~~~~~ 181 (448)
T 3btn_A 107 NIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNA----KVLLHIATEDNIG-GEDGNMKFGTTLKNCRHLL 181 (448)
T ss_dssp GEEECCSSCCHHHHHHHHHHTCCEEEECSHHHHHHHHHHCTTC----EEEEEBCCCC---------CCCCBCHHHHHHHH
T ss_pred CEEECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCC----CCEEEECCCCCCC-CCCCCCCCCCCHHHHHHHH
T ss_conf 2999089899999999998699759989999999999862358----8012112444333-2224666687778999887
Q ss_pred HHHHHHHCCEEEE-ECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHH---HHHHH----HH
Q ss_conf 9886652876885-2288999987650215788225762899999998505977998367778999---99999----99
Q gi|254780669|r 108 RDLKKKYGFPILT-DVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPW---EMHNI----LQ 179 (301)
Q Consensus 108 ~e~k~~~glpv~T-eV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~---e~~~a----~e 179 (301)
+.+++ .++.++- -+|--+|+.....+...++.-+ .-++++.+.+-.-+-++|--|...... ++..+ .+
T Consensus 182 ~~~k~-~~l~l~Glh~H~GS~~~d~~~~~~~i~~~~---~~~~~~~~~g~~~~~idiGGGf~~~~~~~~~~~~~i~~~~~ 257 (448)
T 3btn_A 182 ECAKE-LDVQIIGVKFHVSSACKEYQVYVHALSDAR---CVFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLD 257 (448)
T ss_dssp HHHHH-HTCEEEEEECCCCTTCCCTTHHHHHHHHHH---HHHHHHHHTTCCCCEEECCSCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHC-CCCEEEEEEEEECCCCCCHHHHHHHHHHHH---HHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 77622-881785645541365465487999999999---99999998299536762157666566765668899988776
Q ss_pred HHHHCCCCCEEEEECCC
Q ss_conf 99725878089951465
Q gi|254780669|r 180 KLHAHGAKDVLFCERGT 196 (301)
Q Consensus 180 ki~~~Gn~~i~lcERG~ 196 (301)
.....+..--+++|-|-
T Consensus 258 ~~~~~~~~~~li~EPGR 274 (448)
T 3btn_A 258 IYFPEGSGIQIISEPGS 274 (448)
T ss_dssp HHSCTTSCCEEEECCSH
T ss_pred HHHHHCCCCEEEECCCC
T ss_conf 53320589769967986
No 176
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=38.20 E-value=20 Score=15.72 Aligned_cols=114 Identities=16% Similarity=0.266 Sum_probs=61.3
Q ss_pred CCCHHHHHHHHH-HCCEEEECHHHCCC---HHHHHHHHH-CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC-
Q ss_conf 288999987650-21578822576289---999999850-597799836777899999999999972587808995146-
Q gi|254780669|r 122 VHTEQQCEAIAD-SVDILQIPALLCRQ---TDLLTAAAQ-TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERG- 195 (301)
Q Consensus 122 V~~~~~~e~~~~-~vDilQIgA~~~rq---tdLl~a~a~-t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG- 195 (301)
+.+.+.++.+.+ .+|++-|-.-+-.. .+.++.+.+ .+.||.. |--.+++ .++.+...|..-|.+.=-+
T Consensus 143 ~~~~era~~l~~aGvd~ivID~Ahg~s~~~~~~ik~~k~~~~v~VIa--GNV~T~e----~a~~L~~aGAD~VkVGiG~G 216 (400)
T 3ffs_A 143 VNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIV--GNVVTEE----ATKELIENGADGIKVGIGPG 216 (400)
T ss_dssp CC-CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEE--EEECSHH----HHHHHHHTTCSEEEECC---
T ss_pred CCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEE--EECCCHH----HHHHHHHCCCCEEEECCCCC
T ss_conf 69899999998759977975465543210678999988637963999--4217899----99999980998565403278
Q ss_pred -------C-CCCCHHHCCCCCCCHHH----HHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf -------5-44401000000010688----8518716871177742122345321263889999999999718988999
Q gi|254780669|r 196 -------T-SFGYNTLVTDMRSIPIM----TSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFL 262 (301)
Q Consensus 196 -------~-~fgy~~lvvD~~~i~~l----k~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfi 262 (301)
. -+|+.. +.++... ++++.|||-|--..+ ..+.+ .|+++|+|.+|+
T Consensus 217 s~CtTr~~tGvG~Pq----~sav~~~a~~~~~~~v~iIADGGi~~------------~GDi~-----KAla~GAd~VMl 274 (400)
T 3ffs_A 217 SICTTRIVAGVGVPQ----ITAIEKCSSVASKFGIPIIADGGIRY------------SGDIG-----KALAVGASSVMI 274 (400)
T ss_dssp ------CCSCBCCCH----HHHHHHHHHHHTTTTCCEEEESCCCS------------HHHHH-----HHHTTTCSEEEE
T ss_pred CCCCCCCCCCCCCCH----HHHHHHHHHHHHHCCCCEEECCCCCC------------CCHHH-----HHHHCCCCHHHH
T ss_conf 456665303677447----99999999999865997895378576------------87399-----998718735333
No 177
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=37.98 E-value=20 Score=15.70 Aligned_cols=11 Identities=9% Similarity=0.383 Sum_probs=4.5
Q ss_pred CCEEECHHHHH
Q ss_conf 71687117774
Q gi|254780669|r 218 VPVIFDASHSV 228 (301)
Q Consensus 218 ~PVi~D~SHs~ 228 (301)
.||++-|.-|+
T Consensus 97 ~pil~a~NfSl 107 (245)
T 1p9l_A 97 TSVLIAPNFAI 107 (245)
T ss_dssp CEEEECSCCCH
T ss_pred CCEEEECCCHH
T ss_conf 77899662089
No 178
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=37.38 E-value=20 Score=15.64 Aligned_cols=53 Identities=9% Similarity=0.228 Sum_probs=25.9
Q ss_pred CEEEEECCCCCCCHHHCCCCCCCHHHHH-H-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 0899514654440100000001068885-1-871687117774212234532126388999999999971898899983
Q gi|254780669|r 188 DVLFCERGTSFGYNTLVTDMRSIPIMTS-M-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 188 ~i~lcERG~~fgy~~lvvD~~~i~~lk~-~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
-....++|.+...... +...++ . .+||++=--= -.+|.+..++ .++||+.+=+
T Consensus 165 ~~~~~~~g~~~~~~~~------~~~~~k~~~~~Pv~VGFGI-------------ss~e~a~~i~-----~~ADgvIVGS 219 (234)
T 2f6u_A 165 PIIYIEYSGTYGNPEL------VAEVKKVLDKARLFYGGGI-------------DSREKAREML-----RYADTIIVGN 219 (234)
T ss_dssp SEEEEECTTSCCCHHH------HHHHHHHCSSSEEEEESCC-------------CSHHHHHHHH-----HHSSEEEECH
T ss_pred EEEEEECCCCCCCHHH------HHHHHHHCCCCCEEEECCC-------------CCHHHHHHHH-----HHCCEEEECH
T ss_conf 9999812556665067------9999972579839998995-------------9999999999-----6199899995
No 179
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B*
Probab=36.61 E-value=21 Score=15.60 Aligned_cols=27 Identities=11% Similarity=0.267 Sum_probs=12.6
Q ss_pred CCHHHHH----HHHHHHHHCCCCCEEEEECCC
Q ss_conf 8999999----999999725878089951465
Q gi|254780669|r 169 LSPWEMH----NILQKLHAHGAKDVLFCERGT 196 (301)
Q Consensus 169 ~s~~e~~----~a~eki~~~Gn~~i~lcERG~ 196 (301)
-|..++. .+.+.+.. +.+=+++||.|+
T Consensus 361 ES~~dv~~Rl~~~l~eL~~-~~~VLIVsH~~v 391 (520)
T 2axn_A 361 ESYQDLVQRLEPVIMELER-QENVLVICHQAV 391 (520)
T ss_dssp CCHHHHHHHHHHHHHHHHH-CSSEEEEECHHH
T ss_pred CCHHHHHHHHHHHHHHHHC-CCCEEEEECHHH
T ss_conf 7999999999999999657-998999976899
No 180
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=36.61 E-value=21 Score=15.56 Aligned_cols=187 Identities=14% Similarity=0.187 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE--CCCHHHHHHHHH-HCCE
Q ss_conf 9999999996553399706601557688666322245671248889998866528768852--288999987650-2157
Q gi|254780669|r 61 FMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTD--VHTEQQCEAIAD-SVDI 137 (301)
Q Consensus 61 ~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~Te--V~~~~~~e~~~~-~vDi 137 (301)
.+.|+.+.+.+.+ .++=...| +.++-+ .-..+++++.++..+|+.-+ |...++++.+.+ .+|-
T Consensus 35 ~~~a~~~~~~g~d----~l~ivDLd--------~~~~~~--~~~~~i~~i~~~~~~pi~vgGGirs~~~~~~~l~~Ga~k 100 (244)
T 1vzw_A 35 LEAALAWQRSGAE----WLHLVDLD--------AAFGTG--DNRALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTR 100 (244)
T ss_dssp HHHHHHHHHTTCS----EEEEEEHH--------HHHTSC--CCHHHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHCCCC----EEEEEECC--------CCCCCC--CHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCC
T ss_conf 9999999986999----89998334--------334677--369999999986298747746287500021101345432
Q ss_pred EEECHHHCCCHHHHHHHHHCC--C---EEEEECCCCC------CHHHHHHHHHHHHHCCCCCEEEEEC---CCCCCCHHH
Q ss_conf 882257628999999985059--7---7998367778------9999999999997258780899514---654440100
Q gi|254780669|r 138 LQIPALLCRQTDLLTAAAQTG--R---VINVKKGQFL------SPWEMHNILQKLHAHGAKDVLFCER---GTSFGYNTL 203 (301)
Q Consensus 138 lQIgA~~~rqtdLl~a~a~t~--k---pV~iKkgq~~------s~~e~~~a~eki~~~Gn~~i~lcER---G~~fgy~~l 203 (301)
+=++.....+.+++..+.+.. + -+-.|++.+. ...+.....+++.+.|...++++.= |+.-|++
T Consensus 101 vii~s~~~~~~~~~~~~~~~~g~~~ivslD~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~eii~~di~~dGt~~G~d-- 178 (244)
T 1vzw_A 101 VNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPN-- 178 (244)
T ss_dssp EEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CCC--
T ss_pred CHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCEEEECCCCEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCC--
T ss_conf 044566651919889999876925799840213673245353266543567778875166458877762558766689--
Q ss_pred CCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHH-HHHHCCCEEEEEECCCHHHCCCCCCCCCCH
Q ss_conf 000001068885-187168711777421223453212638899999999-997189889998369833479782018688
Q gi|254780669|r 204 VTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKA-AVAIGIAGIFLETHQDPDNAPSDGPNMINI 281 (301)
Q Consensus 204 vvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~a-a~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l 281 (301)
+.-+..+++ ...|+++ +||-+.+-.-.... -...|+||+.+= .|+=. ..+++
T Consensus 179 ---~~l~~~i~~~~~~pvi~---------------~GGv~s~~Dl~~l~~l~~~g~~gvivg------sAl~~--g~i~~ 232 (244)
T 1vzw_A 179 ---LELLKNVCAATDRPVVA---------------SGGVSSLDDLRAIAGLVPAGVEGAIVG------KALYA--KAFTL 232 (244)
T ss_dssp ---HHHHHHHHHTCSSCEEE---------------ESCCCSHHHHHHHHTTGGGTEEEEEEC------HHHHT--TSSCH
T ss_pred ---HHHHHHHHHHCCCCEEE---------------ECCCCCHHHHHHHHHHHHCCCCEEEEH------HHHHC--CCCCH
T ss_conf ---99999999868998999---------------889999999999976404891054456------89887--99899
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780669|r 282 KDLPKLLS 289 (301)
Q Consensus 282 ~~l~~ll~ 289 (301)
+++.+.++
T Consensus 233 ~e~~~~~~ 240 (244)
T 1vzw_A 233 EEALEATS 240 (244)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
T ss_conf 99999872
No 181
>2fuv_A Phosphoglucomutase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, isomerase; HET: MSE; 2.00A {Salmonella typhimurium LT2}
Probab=36.25 E-value=21 Score=15.52 Aligned_cols=179 Identities=12% Similarity=0.098 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHHHHHCCCC-EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--EC--CCHHHHHH
Q ss_conf 9999999999999965533997-0660155768866632224567124888999886652876885--22--88999987
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLNIG-LVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DV--HTEQQCEA 130 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~~~-~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV--~~~~~~e~ 130 (301)
+++.+..++..+...-.+-..+ -+.= ++|- |.|- +.-...+...=...|+.|+. ++ .-+-.+..
T Consensus 60 t~~~~~~~~~a~~~~l~~~~~~~~VvI-g~D~--R~~s--------~~~~~~~~~gL~s~Gi~V~~~~~~G~~pTP~~~~ 128 (549)
T 2fuv_A 60 NEPHILAIAQAIAEERAKNGITGPCYV-GKDT--HALS--------EPAFISVLEVLAANGVDVIVQENNGFTPTPAVSN 128 (549)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSCEEE-EECS--CTTH--------HHHHHHHHHHHHHTTCCEEEEGGGCCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEE-EECC--CCCH--------HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
T ss_conf 999999999999999986399980999-9789--6158--------9999999999997799799958888368089999
Q ss_pred -HH----H---HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH----HHCCCCCEEEEE---CC
Q ss_conf -65----0---215788225762899999998505977998367778999999999999----725878089951---46
Q gi|254780669|r 131 -IA----D---SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKL----HAHGAKDVLFCE---RG 195 (301)
Q Consensus 131 -~~----~---~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki----~~~Gn~~i~lcE---RG 195 (301)
+. . +.--+.|-| +.|.. ...|--+.-+.|..++.+. ...+|.. ......++.-.. ..
T Consensus 129 av~~~~~~~~~~~~GimITA--SHNP~-----~~NGiK~~~~~G~~l~~~~-~~~Ie~~~~~~~~~~~~~~~~~~~~~~~ 200 (549)
T 2fuv_A 129 AILVHNKKGGPLADGIVITP--SHNPP-----EDGGIKYNPPNGGPADTNV-TKVVEDRANALLAGGLQGVKRISLDAAM 200 (549)
T ss_dssp HHHHHHHTCSSCCEEEEECC--TTCCT-----TCEEEEEECTTSSCCCHHH-HHHHHHHHHHHHHTTTTTCCCCCHHHHH
T ss_pred HHHHHCCCCCCCCCEEEEEC--CCCCC-----CCCCEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99996013677342599964--78983-----2276676348986464578-9999999976532023334334421113
Q ss_pred ---------CCCCCHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf ---------54440100000001068885187168711777421223453212638899999999997189889998369
Q gi|254780669|r 196 ---------TSFGYNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQ 266 (301)
Q Consensus 196 ---------~~fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp 266 (301)
..-.|-+.+.+.-.....++.+++|++||.|.+ -..+++.+.. .+|++-..+..+|
T Consensus 201 ~~~~i~~~d~~~~Y~~~l~~~i~~~~i~~~~lkIvvD~~nG~------------~~~~~~~il~---~lg~~~~~~~~~~ 265 (549)
T 2fuv_A 201 ASGHVKAVDLVQPFVEGLADIVDMAAIQKAGLTLGVDPLGGS------------GIEYWKRIAE---HYKLNLTLVNDQV 265 (549)
T ss_dssp HTSCEEEECCHHHHHHHGGGTSCHHHHHHHTCCEEEECTTCT------------THHHHHHHHH---HTTCCEEESCCCC
T ss_pred CCCEEEECCHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCC------------CCCCCCHHHH---HCCCCCCCCCCCC
T ss_conf 577067421188999999887140224226976998457765------------3556612433---2166421122234
Q ss_pred CH
Q ss_conf 83
Q gi|254780669|r 267 DP 268 (301)
Q Consensus 267 ~P 268 (301)
+|
T Consensus 266 ~~ 267 (549)
T 2fuv_A 266 DQ 267 (549)
T ss_dssp CT
T ss_pred CC
T ss_conf 56
No 182
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=36.22 E-value=21 Score=15.52 Aligned_cols=17 Identities=29% Similarity=0.446 Sum_probs=8.9
Q ss_pred CHHHHHHHHHH-CCEEEE
Q ss_conf 89999876502-157882
Q gi|254780669|r 124 TEQQCEAIADS-VDILQI 140 (301)
Q Consensus 124 ~~~~~e~~~~~-vDilQI 140 (301)
+++|++.+++. +|.+-+
T Consensus 137 d~~qi~~a~~~Gad~IEl 154 (243)
T 1m5w_A 137 DEEQIKAAAEVGAPFIEI 154 (243)
T ss_dssp CHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHCCCCEEEE
T ss_conf 889999998719995874
No 183
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis}
Probab=35.85 E-value=21 Score=15.48 Aligned_cols=183 Identities=14% Similarity=0.082 Sum_probs=82.7
Q ss_pred CEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--H
Q ss_conf 27976997069995486349999999999999996553399706601557688666322245671248889998866--5
Q gi|254780669|r 36 QVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKK--K 113 (301)
Q Consensus 36 ~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~--~ 113 (301)
-+..+.+-+|-+|.=+ .. ..+.+..+.+.+ +-+. ....+. ....+.+ +-++..+.+++ .
T Consensus 10 ~~~~~~~m~Ly~IT~~-~~-~~~~l~~i~~~~-~~gv---~~iqlR--------~K~~~~~-----e~~~l~~~l~~~~~ 70 (221)
T 1yad_A 10 LVPRGSHMELHAITDD-SK-PVEELARIIITI-QNEV---DFIHIR--------ERSKSAA-----DILKLLDLIFEGGI 70 (221)
T ss_dssp -------CEEEEECCS-CS-CHHHHHHHHHHH-GGGC---SEEEEC--------CTTSCHH-----HHHHHHHHHHHTTC
T ss_pred CCCCCCCCEEEEECCC-CC-CHHHHHHHHHHH-HCCC---CEEEEC--------CCCCCHH-----HHHHHHHHHHHHHC
T ss_conf 6778657889998699-87-879999999999-7899---899976--------8997999-----99999999998617
Q ss_pred HCCEEEEECCCHHHHHHHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 28768852288999987650-21578822576289999999850597799836777899999999999972587808995
Q gi|254780669|r 114 YGFPILTDVHTEQQCEAIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 114 ~glpv~TeV~~~~~~e~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
++.+++ |++. ++.+.+ .+|-+.+|...+...+. +..- .++.|-+-- -++++...| ...|.+-+.+
T Consensus 71 ~~~~li--Ind~--~~lA~~~~adGvHlg~~d~~~~~~-r~~~-~~~iIG~S~---h~~~e~~~a----~~~gaDYi~~- 136 (221)
T 1yad_A 71 DKRKLV--MNGR--VDIALFSTIHRVQLPSGSFSPKQI-RARF-PHLHIGRSV---HSLEEAVQA----EKEDADYVLF- 136 (221)
T ss_dssp CGGGEE--EESC--HHHHHTTTCCEEEECTTSCCHHHH-HHHC-TTCEEEEEE---CSHHHHHHH----HHTTCSEEEE-
T ss_pred CCCEEE--EECC--HHHHHHCCCCEEECCCCCCCHHHH-HHHC-CCCEEEEEC---CCHHHHHHH----HHCCCCEEEE-
T ss_conf 698599--9697--999986499888415576689999-8645-487898544---459999999----8659997830-
Q ss_pred ECCCCCCCHH----HCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE---
Q ss_conf 1465444010----0000001068885-1871687117774212234532126388999999999971898899983---
Q gi|254780669|r 193 ERGTSFGYNT----LVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET--- 264 (301)
Q Consensus 193 ERG~~fgy~~----lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~--- 264 (301)
|..|...+ -...+..+..+.+ ...||+. .||-. +.-+..++..|++|+-+=.
T Consensus 137 --gpif~T~tK~~~~~~g~~~l~~~~~~~~~PvvA---------------iGGI~---~~ni~~~~~~Ga~gvav~s~I~ 196 (221)
T 1yad_A 137 --GHVFETDCKKGLEGRGVSLLSDIKQRISIPVIA---------------IGGMT---PDRLRDVKQAGADGIAVMSGIF 196 (221)
T ss_dssp --ECCC----------CHHHHHHHHHHHCCSCEEE---------------ESSCC---GGGHHHHHHTTCSEEEESHHHH
T ss_pred --CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE---------------ECCCC---HHHHHHHHHCCCCEEEEEHHHH
T ss_conf --677666666531033678887640035676798---------------67989---9999999980998899849997
Q ss_pred -CCCHHHC
Q ss_conf -6983347
Q gi|254780669|r 265 -HQDPDNA 271 (301)
Q Consensus 265 -Hp~P~~A 271 (301)
.+||.++
T Consensus 197 ~~~dp~~~ 204 (221)
T 1yad_A 197 SSAEPLEA 204 (221)
T ss_dssp TSSSHHHH
T ss_pred CCCCHHHH
T ss_conf 79999999
No 184
>2o7s_A DHQ-SDH, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase; NADPH, dehydroshikimate, bifunctional enzyme, oxidoreductase; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=35.57 E-value=22 Score=15.45 Aligned_cols=129 Identities=15% Similarity=0.187 Sum_probs=70.3
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCH
Q ss_conf 99954863499999999999999965533997066015576886663222456712488899988665287688522889
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTE 125 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~ 125 (301)
.+|.-|.+-++.|.++.-+..+++.+.++. =+ |- +-+... ..++-+..+++++++|++--+...
T Consensus 5 ~~icvpl~~~~~~e~~~~~~~~~~~gaD~v---El--------R~--D~l~~~---~~~~~l~~~~~~~~~piI~T~R~~ 68 (523)
T 2o7s_A 5 SLICAPVMADSIDKMVIETSKAHELGADLV---EI--------RL--DWLKDF---NPLEDLKTIIKKSPLPTLFTYRPK 68 (523)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTCSEE---EE--------EG--GGCSSC---CHHHHHHHHHHHCSSCEEEECCBG
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHCCCCEE---EE--------EE--ECCCCC---CCHHHHHHHHHHCCCCEEEEECCH
T ss_conf 889999588999999999999764499989---99--------85--023255---809999999983899389995777
Q ss_pred -----------HHHHH---HHHH-CCEEEECHHHCCCHHHHHHHHH---CCCEEEEECCC---CCCHHHHHHHHHHHHHC
Q ss_conf -----------99987---6502-1578822576289999999850---59779983677---78999999999999725
Q gi|254780669|r 126 -----------QQCEA---IADS-VDILQIPALLCRQTDLLTAAAQ---TGRVINVKKGQ---FLSPWEMHNILQKLHAH 184 (301)
Q Consensus 126 -----------~~~e~---~~~~-vDilQIgA~~~rqtdLl~a~a~---t~kpV~iKkgq---~~s~~e~~~a~eki~~~ 184 (301)
+..+. +.+. +|.+-|-.+.- -++++.+.. .+..|.+-.+- ..+.+++....+++.+.
T Consensus 69 ~eGG~~~~~~~~~~~ll~~~~~~~~d~iDiEl~~~--~~~~~~l~~~~~~~~kvI~S~H~f~~tp~~~~l~~~~~~~~~~ 146 (523)
T 2o7s_A 69 WEGGQYEGDENERRDVLRLAMELGADYIDVELQVA--SEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQT 146 (523)
T ss_dssp GGTSSBCSCHHHHHHHHHHHHHHTCSEEEEEHHHH--HHHHHHTTTCCCTTCEEEEEEECSSCCCCHHHHHHHHHHHHTT
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC--HHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 77999889999999999999997999999988885--8999999984348987999967899998866799999999974
Q ss_pred CCCCEEEE
Q ss_conf 87808995
Q gi|254780669|r 185 GAKDVLFC 192 (301)
Q Consensus 185 Gn~~i~lc 192 (301)
|.+=+-++
T Consensus 147 gadivKia 154 (523)
T 2o7s_A 147 GADIVKIA 154 (523)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEE
T ss_conf 99968885
No 185
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor}
Probab=34.96 E-value=22 Score=15.39 Aligned_cols=217 Identities=15% Similarity=0.173 Sum_probs=112.4
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCC-----CCCCCC-CCCCCCHHHHHHHHHHHHH-HCCE
Q ss_conf 999548634999999999999999655339-9706601557688-----666322-2456712488899988665-2876
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKAN-----RSSLAG-KRGVGLKKGREIFRDLKKK-YGFP 117 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKan-----RtS~~s-frG~Gle~gL~il~e~k~~-~glp 117 (301)
.+.||= -+.|...++++.+.+.|.++. +|.=|. -+.|- +++..+ .+|..+++.++++++++.+ ...|
T Consensus 25 yltaG~---P~~e~s~~~l~~l~~~G~D~iEiGiPfS--DPvaDGpvIq~a~~raL~~G~~~~~~~~~~~~~r~~~~~~p 99 (271)
T 3nav_A 25 FVTIGD---PNPEQSLAIMQTLIDAGADALELGMPFS--DPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETP 99 (271)
T ss_dssp EEETTS---SCHHHHHHHHHHHHHTTCSSEEEECCCC--CGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred EEECCC---CCHHHHHHHHHHHHHCCCCEEEECCCCC--CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 983718---9878999999999976999999789988--87776899999988877648607667667766420267888
Q ss_pred EEEE--CC-----CH-HHHHHHHHH-CCEEEECHHHC-CCHHHHHHHHHCCC-EEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 8852--28-----89-999876502-15788225762-89999999850597-799836777899999999999972587
Q gi|254780669|r 118 ILTD--VH-----TE-QQCEAIADS-VDILQIPALLC-RQTDLLTAAAQTGR-VINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 118 v~Te--V~-----~~-~~~e~~~~~-vDilQIgA~~~-rqtdLl~a~a~t~k-pV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
++-= .. .. +-++.+++. +|-+=||---. ...++..++.+.+. +|.+=-+ .++.+. .+++.+...
T Consensus 100 ~vlM~Y~N~i~~~G~e~F~~~~~~~Gv~GviipDLp~ee~~~~~~~~~~~gl~~I~lvsp--tt~~~R---i~~i~~~a~ 174 (271)
T 3nav_A 100 IGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPP--TASDET---LRAVAQLGK 174 (271)
T ss_dssp EEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECT--TCCHHH---HHHHHHHCC
T ss_pred EEEEEEEHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECC--CCHHHH---HHHHHHCCC
T ss_conf 799975046655289999999987699489945898156599999987679717999446--755889---999986188
Q ss_pred CCEEEEEC-CCCCCCHH-HCCCCC-CCHHHHHH-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 80899514-65444010-000000-10688851-8716871177742122345321263889999999999718988999
Q gi|254780669|r 187 KDVLFCER-GTSFGYNT-LVTDMR-SIPIMTSM-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFL 262 (301)
Q Consensus 187 ~~i~lcER-G~~fgy~~-lvvD~~-~i~~lk~~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfi 262 (301)
.=|.+..+ |+| |-.+ +..++. .+..+|+. ..||++---=+ .++ .++.++..++||+.+
T Consensus 175 gfiY~vs~~GvT-G~~~~~~~~~~~~i~~ik~~t~~Pv~vGFGI~-------------~~e----~v~~~~~~~ADGvVV 236 (271)
T 3nav_A 175 GYTYLLSRAGVT-GAETKANMPVHALLERLQQFDAPPALLGFGIS-------------EPA----QVKQAIEAGAAGAIS 236 (271)
T ss_dssp SCEEECCCC---------CCHHHHHHHHHHHHTTCCCEEECSSCC-------------SHH----HHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCCC-CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEC-------------CHH----HHHHHHHCCCCEEEE
T ss_conf 738985055567-87766650289999987533689728983018-------------899----999998738999998
Q ss_pred EECCCH--HHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 836983--347978201868899999999999
Q gi|254780669|r 263 ETHQDP--DNAPSDGPNMINIKDLPKLLSQLL 292 (301)
Q Consensus 263 E~Hp~P--~~AlsD~~q~l~l~~l~~ll~~l~ 292 (301)
=++--- ++...++ +-.++.+.+++++++
T Consensus 237 GSaiv~~i~~~~~~~--~~~~~~v~~~~~~lk 266 (271)
T 3nav_A 237 GSAVVKIIETHLDNP--AKQLTELANFTQAMK 266 (271)
T ss_dssp SHHHHHHHHHTTTCH--HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCH--HHHHHHHHHHHHHHH
T ss_conf 879999998705367--899999999999999
No 186
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=33.62 E-value=23 Score=15.25 Aligned_cols=99 Identities=11% Similarity=0.049 Sum_probs=46.5
Q ss_pred CHHHHHHHH----HC--CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCC-CC----CCCHHHHH
Q ss_conf 999999985----05--977998367778999999999999725878089951465444010000-00----01068885
Q gi|254780669|r 147 QTDLLTAAA----QT--GRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVT-DM----RSIPIMTS 215 (301)
Q Consensus 147 qtdLl~a~a----~t--~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvv-D~----~~i~~lk~ 215 (301)
+.+++..++ .. +..|.++||..+-...--.....+ +-+.-|--.+..|...-- |. .-+..+++
T Consensus 165 m~~~l~~L~~~~r~r~P~~~ii~NnG~ell~~~~~~l~~~v------dgv~~Eslf~~~~~~~~~~d~~~~l~~l~~~~~ 238 (309)
T 2aam_A 165 MINFVLEIAEYVRERKPDMLIIPQNGENILDFDDGQLASTV------SGWAVENLFYLKTIPLEENETKSRLEYLIRLNR 238 (309)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEBSCGGGGGGCCSHHHHHC------SEEEEESSSEETTEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCHHHHHHC------CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999997589958996475787634421343110------358875640487765799999999999999997
Q ss_pred HCCCEE----ECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 187168----7117774212234532126388999999999971898899
Q gi|254780669|r 216 MGVPVI----FDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIF 261 (301)
Q Consensus 216 ~~~PVi----~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlf 261 (301)
.+.||+ +||.+. ..-+++-+..+++.+.+.|.--..
T Consensus 239 ~G~pV~~iDY~~~~~~----------~~~~~~~~~~~~~~~~~~GF~pYV 278 (309)
T 2aam_A 239 KGKFILSVDYVDDGSD----------SFENISRILDYYEKAKRNGCIPYA 278 (309)
T ss_dssp TTCEEEEEEEEECSSC----------BHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred CCCEEEEEECCCCCCC----------HHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 6992999973799871----------244499999999999977998884
No 187
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus HB8} PDB: 2yw4_A
Probab=33.59 E-value=23 Score=15.25 Aligned_cols=107 Identities=21% Similarity=0.255 Sum_probs=75.8
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE-ECCCHHHHHHHHH
Q ss_conf 999999999999999655339970660155768866632224567124888999886652876885-2288999987650
Q gi|254780669|r 55 ESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT-DVHTEQQCEAIAD 133 (301)
Q Consensus 55 ES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T-eV~~~~~~e~~~~ 133 (301)
.+.|++..+++.|.+.|.+. +. -.+|.+ .+++.+++++++ ++-+-- -|.+.+|++.+.+
T Consensus 22 ~~~~~a~~~~~al~~~Gi~~---------iE-------itl~tp---~a~~~i~~l~~~-~~~iGaGTV~~~~~~~~a~~ 81 (207)
T 2yw3_A 22 RGGEDLLGLARVLEEEGVGA---------LE-------ITLRTE---KGLEALKALRKS-GLLLGAGTVRSPKEAEAALE 81 (207)
T ss_dssp CSCCCHHHHHHHHHHTTCCE---------EE-------EECSST---HHHHHHHHHTTS-SCEEEEESCCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCE---------EE-------EECCCC---HHHHHHHHHCCC-CCEEEEHHCCCHHHHHHHHH
T ss_conf 99999999999999879988---------99-------968992---299999985457-85893112057789999998
Q ss_pred -HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf -2157882257628999999985059779983677789999999999997258780899
Q gi|254780669|r 134 -SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 134 -~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
.++.+=-|. -+.++++.+.+.+.|+. +=-+||.|...|.++ |.+-+-+
T Consensus 82 aGa~FivSP~---~~~~v~~~a~~~~i~~i---PGv~TpsEi~~A~~~----G~~~vK~ 130 (207)
T 2yw3_A 82 AGAAFLVSPG---LLEEVAALAQARGVPYL---PGVLTPTEVERALAL----GLSALKF 130 (207)
T ss_dssp HTCSEEEESS---CCHHHHHHHHHHTCCEE---EEECSHHHHHHHHHT----TCCEEEE
T ss_pred CCCCEEECCC---CCHHHHHHHHHCCCCEE---CCCCCHHHHHHHHHC----CCCEEEE
T ss_conf 0999898588---86999999996299751---787999999999976----9997986
No 188
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii}
Probab=33.55 E-value=23 Score=15.24 Aligned_cols=24 Identities=8% Similarity=0.133 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 999999999999655339970660
Q gi|254780669|r 58 DHAFMIAEKLYAICQSLNIGLVYK 81 (301)
Q Consensus 58 e~~~~~A~~lk~~~~~~~~~~ifK 81 (301)
+.+.+.+..+.++|-+.....+|-
T Consensus 131 ~~~~e~~~~~lA~GlDp~kt~i~~ 154 (392)
T 3jxe_A 131 RWAYDNILDIIAVGFDPDKTFIFQ 154 (392)
T ss_dssp HHHHHHHHHHHTTCCCTTSEEEEE
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 999999999998089920359997
No 189
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynthesis, heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=32.81 E-value=24 Score=15.17 Aligned_cols=111 Identities=18% Similarity=0.193 Sum_probs=60.7
Q ss_pred CCCHHHHHHCCCCCCEEEE-CCCEEEECCCCCCEEECCCCCEEEEECCCCCC-----------CHHHHHHHHHHHHHHHH
Q ss_conf 5203445430468761783-17706835787727976997069995486349-----------99999999999999655
Q gi|254780669|r 5 YPQNLEEKQRRIDKNHMIH-TNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIE-----------SHDHAFMIAEKLYAICQ 72 (301)
Q Consensus 5 ~pykl~~~~~~i~~~~~~~-~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiE-----------S~e~~~~~A~~lk~~~~ 72 (301)
.+..+..|-+|+..+.++. ...+.++-. ++-| .|+|+.-|+..-| |.+.+.+.++.+.+.|.
T Consensus 5 ~~~~~~~R~RRlR~~~~iR~Lv~Et~Ls~-~dLI-----~PiFV~eg~~~~~~I~SMPGi~R~SiD~L~~~ie~~~~lGI 78 (328)
T 1w1z_A 5 DLLNIVHRPRRLRRTAALRNLVQENTLTV-NDLV-----FPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGI 78 (328)
T ss_dssp -----CCCGGGGTSSHHHHHHHCCCCCCG-GGEE-----EEEEEESSSSCEEEETTEEEEEEEEHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCH-HHCE-----EEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCC
T ss_conf 53643556764679879999987079888-9966-----20699528997235689998346679999999999998699
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCEEEEECCCHH
Q ss_conf 339970660155768866632224567124888999886652-876885228899
Q gi|254780669|r 73 SLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY-GFPILTDVHTEQ 126 (301)
Q Consensus 73 ~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~-glpv~TeV~~~~ 126 (301)
+...=+- .|.- |. -.--.+|..-|+ -.+..+.+|++| ++-|+|||.-..
T Consensus 79 ~av~LFp-v~~~-K~-~~gs~A~n~d~l--v~rAIr~iK~~fpdl~vi~DVcLc~ 128 (328)
T 1w1z_A 79 QGIDLFG-IPEQ-KT-EDGSEAYNDNGI--LQQAIRAIKKAVPELCIMTDVALDP 128 (328)
T ss_dssp CEEEEEE-CCSS-CC-SSCGGGGCTTSH--HHHHHHHHHHHSTTSEEEEEECSTT
T ss_pred CEEEEEE-CCCC-CC-CCCCCCCCCCCH--HHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 8899972-4555-56-785202697537--9999999985489858986220156
No 190
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=32.77 E-value=24 Score=15.16 Aligned_cols=160 Identities=14% Similarity=0.169 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 48889998866528768852288999987650-21578822576289999999850597799836777899999999999
Q gi|254780669|r 102 KGREIFRDLKKKYGFPILTDVHTEQQCEAIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQK 180 (301)
Q Consensus 102 ~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~ek 180 (301)
.+-+-|.++=++-.+-..--++++-++-.+.+ ..+.+.+.-+-+--+-+ .+..+.|= --..+..++...+++
T Consensus 52 ~~A~kLr~LL~~~~~v~~~Ga~d~~~A~~~~~aGf~aiY~SG~~vsA~~~---~a~~~~PD----~gl~~~~ev~~~v~~ 124 (439)
T 3i4e_A 52 RGAEKLWTLINNEPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDAN---VAGEMYPD----QSLYPANSVPLVVKR 124 (439)
T ss_dssp HHHHHHHHHHHHSSCEEEEBCCSHHHHHHHHHHTCSCEEECHHHHHHHTC---TTCCCCCS----SSCSCTTHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEECCHHHHCCCC---CCCCCCCC----CCCCCHHHHHHHHHH
T ss_conf 99999999970799686266567899999998299889965676633111---35789886----242408899999999
Q ss_pred HHHCCC--CCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 972587--808995146544401000000010688851871687117774212234532126388999999999971898
Q gi|254780669|r 181 LHAHGA--KDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIA 258 (301)
Q Consensus 181 i~~~Gn--~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~d 258 (301)
|...-. +++-+.|+... + ..-.+| +-+|||.|.-..- |...-|-.+.|.-+.+|+.
T Consensus 125 I~~a~~~ad~~~~~~~~~~-~-~~~~~d---------~~iPIIADaDtGf-----------Gg~~nv~rtvk~~i~AGaA 182 (439)
T 3i4e_A 125 INNTLTRADQIQWSEGKNP-G-DEGYVD---------FFAPIVADAEAGF-----------GGVLNAFELMKAMIEAGAS 182 (439)
T ss_dssp HHHHHHHHHHHHHHTTCCT-T-STTCCC---------CCCCEEEECTTTT-----------SSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHCCCC-C-CCCCCC---------CCCCEEEECCCCC-----------CHHHHHHHHHHHHHHCCCC
T ss_conf 9999888999988530354-4-333322---------3453353057787-----------7499999999999974987
Q ss_pred EEEEEECC-CHHHC-CCCCCCCCCHHHHHHHHHH
Q ss_conf 89998369-83347-9782018688999999999
Q gi|254780669|r 259 GIFLETHQ-DPDNA-PSDGPNMINIKDLPKLLSQ 290 (301)
Q Consensus 259 GlfiE~Hp-~P~~A-lsD~~q~l~l~~l~~ll~~ 290 (301)
|+.||=.- .|++. --+|..-++.+++-.-|+-
T Consensus 183 gihiEDQ~~~~KkCGH~~GK~lVp~~e~i~ki~A 216 (439)
T 3i4e_A 183 GVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTA 216 (439)
T ss_dssp EEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCEECCCCCEEECHHHHHHHHHH
T ss_conf 8864288874001123699876169999999999
No 191
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=32.04 E-value=25 Score=15.09 Aligned_cols=95 Identities=12% Similarity=0.124 Sum_probs=58.8
Q ss_pred CCCHHHHHHHHHHHHHHC-CEEEEECC---CHHH-HH---HHHH-HCCEEEEC--------HH-----HCCCHHHHHHHH
Q ss_conf 671248889998866528-76885228---8999-98---7650-21578822--------57-----628999999985
Q gi|254780669|r 98 VGLKKGREIFRDLKKKYG-FPILTDVH---TEQQ-CE---AIAD-SVDILQIP--------AL-----LCRQTDLLTAAA 155 (301)
Q Consensus 98 ~Gle~gL~il~e~k~~~g-lpv~TeV~---~~~~-~e---~~~~-~vDilQIg--------A~-----~~rqtdLl~a~a 155 (301)
.|.+.-++.+.++|+++. .+++.-++ +.++ .+ .+.+ .+|.|.+- .+ ..++.+++.++-
T Consensus 616 ~~~~~~~~~i~~~k~~~p~~~~Iasi~~~~~~ed~~~la~~~e~~gaD~iElNiScPn~~~~r~~g~~~g~~p~~~~~i~ 695 (1025)
T 1gte_A 616 KTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 695 (1025)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 64999999999987517888269770799999999999999875499989997999999884322310146999999999
Q ss_pred H-----CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 0-----59779983677789999999999997258780899514
Q gi|254780669|r 156 Q-----TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCER 194 (301)
Q Consensus 156 ~-----t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcER 194 (301)
+ +++||.+|=.+..+ ++...++.+...|.+-|.++-+
T Consensus 696 ~~Vr~~~~iPv~vKLsP~~t--di~~ia~aa~~~Gadgv~~iNT 737 (1025)
T 1gte_A 696 RWVRQAVQIPFFAKLTPNVT--DIVSIARAAKEGGADGVTATNT 737 (1025)
T ss_dssp HHHHHHCSSCEEEEECSCSS--CHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHCCCCCEEEECCCCCH--HHHHHHHHHHHCCCCEEEEECC
T ss_conf 99975789978998288816--2999999999849989999677
No 192
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} PDB: 3o6d_A*
Probab=31.85 E-value=25 Score=15.07 Aligned_cols=96 Identities=18% Similarity=0.169 Sum_probs=52.7
Q ss_pred HHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE---------EECCCCCCCHHHCCCCCCCHHH
Q ss_conf 7628999999985059779983677789999999999997258780899---------5146544401000000010688
Q gi|254780669|r 143 LLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLF---------CERGTSFGYNTLVTDMRSIPIM 213 (301)
Q Consensus 143 ~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~l---------cERG~~fgy~~lvvD~~~i~~l 213 (301)
|..|..|+..-......|.|+.-. .+ .+|+..+.++.- .++-| +|.|-.+.++.| -..+..+
T Consensus 50 RHI~~~Dv~~l~~~~~~~~NlE~~--~~-~e~i~ia~~~kP---~qvtLVPe~r~elTTegGld~~~~~L---~~~i~~l 120 (260)
T 3o6c_A 50 RHAQDFDLENIIKFCKSPVNLECA--LN-DEILNLALKLKP---HRVTLVPEKREELTTEGGLCLNHAKL---KQSIEKL 120 (260)
T ss_dssp SSSCHHHHHHHHHHCSSCEEEEEC--SC-HHHHHHHHHHCC---SEEEECCCSGGGBCTTSSBCTTCTTH---HHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCC--CC-HHHHHHHHHCCC---CEEEECCCCCCCCCCCCCCCCHHHHH---HHHHHHH
T ss_conf 888799999888612574356889--98-589999996699---75897668866432468844006779---9999986
Q ss_pred HHHCC--CEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 85187--168711777421223453212638899999999997189889998369833
Q gi|254780669|r 214 TSMGV--PVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 214 k~~~~--PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~ 269 (301)
|+.+. -+.+||.= ....+|...|+|- ||-|.-|=
T Consensus 121 k~~gIrVSLFIDPd~--------------------~~i~~A~~~Gad~--VElhTG~Y 156 (260)
T 3o6c_A 121 QNANIEVSLFINPSL--------------------EDIEKSKILKAQF--IELHTGHY 156 (260)
T ss_dssp HHTTCEEEEEECSCH--------------------HHHHHHHHTTCSE--EEECCHHH
T ss_pred HHCCCEEEEEECCCH--------------------HHHHHHHHCCCCE--EEEECHHH
T ss_conf 534962899968998--------------------9999984279898--99834566
No 193
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A substrate tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=31.48 E-value=25 Score=15.02 Aligned_cols=155 Identities=18% Similarity=0.264 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHCCEEE--------EECC-----CHHHHHHHHH-HCCEEEECHHHCCCHHHH-------------HHH
Q ss_conf 488899988665287688--------5228-----8999987650-215788225762899999-------------998
Q gi|254780669|r 102 KGREIFRDLKKKYGFPIL--------TDVH-----TEQQCEAIAD-SVDILQIPALLCRQTDLL-------------TAA 154 (301)
Q Consensus 102 ~gL~il~e~k~~~glpv~--------TeV~-----~~~~~e~~~~-~vDilQIgA~~~rqtdLl-------------~a~ 154 (301)
.-+++++++.++..+|+. .||- ..+++..+.. .+|=+=|++...++.+++ +++
T Consensus 314 ~~~~~i~~ia~~~~iPltvGGGIrsi~die~~~~~~~e~A~~ll~~GadKV~inS~Av~~pe~~~e~~~~~~n~~~i~~~ 393 (555)
T 1jvn_A 314 PMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETI 393 (555)
T ss_dssp HHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHH
T ss_pred CHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHHHHCCCCHHHHHH
T ss_conf 08999999986468878984771564673310110279999999779987998837860907668887611681689999
Q ss_pred HHC-C--C---EEEEECCC--------------------------------------CCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf 505-9--7---79983677--------------------------------------78999999999999725878089
Q gi|254780669|r 155 AQT-G--R---VINVKKGQ--------------------------------------FLSPWEMHNILQKLHAHGAKDVL 190 (301)
Q Consensus 155 a~t-~--k---pV~iKkgq--------------------------------------~~s~~e~~~a~eki~~~Gn~~i~ 190 (301)
++. | . -|-+||.. .+++.+|. +++.+.|.-.|+
T Consensus 394 a~~fGsQ~IvvsiD~k~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~ggr~~t~~~~~~~~---~~~~~~GaGEIl 470 (555)
T 1jvn_A 394 SKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELT---RACEALGAGEIL 470 (555)
T ss_dssp HHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHH---HHHHHTTCCEEE
T ss_pred HHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCHHHHH---HHHHHCCCCEEE
T ss_conf 99819832999998762356654444443100123467776531699997188062899999999---999966998999
Q ss_pred EEEC---CCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE--
Q ss_conf 9514---654440100000001068885-1871687117774212234532126388999999999971898899983--
Q gi|254780669|r 191 FCER---GTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET-- 264 (301)
Q Consensus 191 lcER---G~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~-- 264 (301)
++-= |+.-||+ +.-+..+++ ...|||.= || .|.-.++.. +-...|+||+.+=.
T Consensus 471 ltsId~DGt~~G~D-----l~l~~~i~~~~~iPvIas--------GG----~g~~~di~~----~~~~~~~~av~~~s~f 529 (555)
T 1jvn_A 471 LNCIDKDGSNSGYD-----LELIEHVKDAVKIPVIAS--------SG----AGVPEHFEE----AFLKTRADACLGAGMF 529 (555)
T ss_dssp ECCGGGTTTCSCCC-----HHHHHHHHHHCSSCEEEC--------SC----CCSHHHHHH----HHHHSCCSEEEESHHH
T ss_pred EEEECCCCCCCCCC-----HHHHHHHHHHCCCCEEEE--------CC----CCCHHHHHH----HHHHCCCEEEEEEHHH
T ss_conf 96254778888769-----999999997589899997--------89----899999999----9986897499880066
Q ss_pred CCCHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 69833479782018688999999999
Q gi|254780669|r 265 HQDPDNAPSDGPNMINIKDLPKLLSQ 290 (301)
Q Consensus 265 Hp~P~~AlsD~~q~l~l~~l~~ll~~ 290 (301)
|- ..+++.++++.|.+
T Consensus 530 h~----------~~~~i~~~K~~L~~ 545 (555)
T 1jvn_A 530 HR----------GEFTVNDVKEYLLE 545 (555)
T ss_dssp HT----------TSCCHHHHHHHHHH
T ss_pred HC----------CCCCHHHHHHHHHH
T ss_conf 77----------99899999999998
No 194
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=31.24 E-value=25 Score=15.00 Aligned_cols=114 Identities=14% Similarity=0.178 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCHHHHH-HHHHHC-----CEEEECHHHCCCHHHHHHHHHC-CCEEEEE---CCCCCCH
Q ss_conf 4888999886652876885228899998-765021-----5788225762899999998505-9779983---6777899
Q gi|254780669|r 102 KGREIFRDLKKKYGFPILTDVHTEQQCE-AIADSV-----DILQIPALLCRQTDLLTAAAQT-GRVINVK---KGQFLSP 171 (301)
Q Consensus 102 ~gL~il~e~k~~~glpv~TeV~~~~~~e-~~~~~v-----DilQIgA~~~rqtdLl~a~a~t-~kpV~iK---kgq~~s~ 171 (301)
.-.+.=+++++.+|.+-..=|..-..+- .+.... |-+-+|++.|.-+- .++... .+||.+- ....+++
T Consensus 37 ~v~~fE~~~a~~~g~~~av~~~sGT~Al~lal~al~~~~gdeVi~p~~t~~a~~--~ai~~~G~~pv~~Did~~~~~id~ 114 (373)
T 3frk_A 37 EDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATA--LAVSYTGAKPIFVEPDIRTYNIDP 114 (373)
T ss_dssp HHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHH--HHHHHHSCEEEEECEETTTTEECG
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH--HHHHHCCCCEEEECCCCCCCCCCH
T ss_conf 799999999999783969996369999999999849999699996787403013--267514674057526888677399
Q ss_pred HHHHHHHHHHHHCCCCC-EEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHH
Q ss_conf 99999999997258780-8995146544401000000010688-851871687117774
Q gi|254780669|r 172 WEMHNILQKLHAHGAKD-VLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSV 228 (301)
Q Consensus 172 ~e~~~a~eki~~~Gn~~-i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~ 228 (301)
++...++ . .+.. |++.+ .||+ ..|+..+-.+ ++.++|||.|+.||.
T Consensus 115 ~~l~~~i----t-~~tkaIi~vh---~~G~---~~d~~~i~~ia~~~~i~lIeD~A~a~ 162 (373)
T 3frk_A 115 SLIESAI----T-EKTKAIIAVH---LYGQ---PADMDEIKRIAKKYNLKLIEDAAQAH 162 (373)
T ss_dssp GGTGGGC----C-TTEEEEEEEC---CTTC---CCCHHHHHHHHHHHTCEEEEECTTCT
T ss_pred HHHHHHC----C-CCCEEEEEEC---CCCC---CCCHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 9999853----6-8974999868---8877---14899999999985998999981123
No 195
>2hjp_A Phosphonopyruvate hydrolase; phosporus- carbon bond cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=30.96 E-value=26 Score=14.97 Aligned_cols=84 Identities=10% Similarity=0.058 Sum_probs=37.6
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHHH-HCCEEEECHHHCCC------------HHHHHHHHH----CCCEEEEE--CCC
Q ss_conf 998866528768852288999987650-21578822576289------------999999850----59779983--677
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIAD-SVDILQIPALLCRQ------------TDLLTAAAQ----TGRVINVK--KGQ 167 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~~-~vDilQIgA~~~rq------------tdLl~a~a~----t~kpV~iK--kgq 167 (301)
|++.-+.=++-++-.++|+-.+-.+.+ ..+.++++.+-+-. ++++..+.+ ++.||.+- .|+
T Consensus 7 lr~l~~~~~~~~~p~~~D~~SAr~~e~aGf~ai~~sg~~~aas~G~pD~~~~~~~e~~~~~~~I~~~~~~Pv~aD~d~Gy 86 (290)
T 2hjp_A 7 LRAALDSGRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGF 86 (290)
T ss_dssp HHHHHHHCCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTT
T ss_pred HHHHHHCCCCEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
T ss_conf 99997279978855776899999999839999996589999866999855341445999999986115787799876667
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 789999999999997258780899
Q gi|254780669|r 168 FLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 168 ~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
. .+.+....++.+...|.--|.+
T Consensus 87 G-~~~~v~~tv~~~~~aG~agi~I 109 (290)
T 2hjp_A 87 G-NAVNVHYVVPQYEAAGASAIVM 109 (290)
T ss_dssp S-SHHHHHHHHHHHHHHTCSEEEE
T ss_pred C-CHHHHHHHHHHHHHCCCCEEEE
T ss_conf 7-3489999999999807918997
No 196
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=30.59 E-value=26 Score=14.93 Aligned_cols=61 Identities=11% Similarity=0.133 Sum_probs=46.6
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHH-HCCCEEEEECC
Q ss_conf 99988665287688522889999876502157882257628999999985-05977998367
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAA-QTGRVINVKKG 166 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a-~t~kpV~iKkg 166 (301)
-+++.-++.|+++.-+-....+++...+..|++-++--.....+=+++.+ +.+.||.+=.+
T Consensus 23 km~~~a~~~~~~~~I~A~~~~~~~~~~~~~DviLL~PQv~y~~~~i~~~~~~~~ipV~~I~~ 84 (109)
T 2l2q_A 23 RIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIINT 84 (109)
T ss_dssp HHHHHHHHHTCSEEEEEECSTTHHHHTTTCSEEEECSCCSSHHHHHHHHHHHHTCCEEECCH
T ss_pred HHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCEEEECH
T ss_conf 99999998699779999768999866229989999973888899999984157982999785
No 197
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- 2, protein structure initiative; HET: MSE; 1.72A {Bacteroides vulgatus atcc 8482}
Probab=30.47 E-value=18 Score=15.94 Aligned_cols=48 Identities=25% Similarity=0.269 Sum_probs=30.5
Q ss_pred HHHHHHHCCCEEEEEECCCHHHCCCCCCCCC---CHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999971898899983698334797820186---88999999999999999885
Q gi|254780669|r 249 AKAAVAIGIAGIFLETHQDPDNAPSDGPNMI---NIKDLPKLLSQLLAIDKIIK 299 (301)
Q Consensus 249 a~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l---~l~~l~~ll~~l~~i~~~vk 299 (301)
..+|..+|+..+.+-..+.+++.+.+...-+ ++.+|.++++. +...++
T Consensus 195 i~aA~~aG~~~I~v~~g~~~~~~l~~~~ad~vi~sl~dl~~~~~~---l~~~~~ 245 (247)
T 3dv9_A 195 VQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWET---LQSALK 245 (247)
T ss_dssp HHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHH---HHHHHC
T ss_pred HHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCHHHHHHHHHH---HHHHHC
T ss_conf 999999599899988999997889668999999999999999999---999745
No 198
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris}
Probab=30.32 E-value=26 Score=14.90 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=58.4
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 69995486349999999999999996553399706601557688666322245671248889998866528768852288
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHT 124 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~ 124 (301)
..+|+| ++-.|-+...+.|+..++.|.+... +.=|.|.+ +..+.-.++++++.+..++|++-
T Consensus 74 ~~vi~g-v~~~s~~~~i~~a~~a~~~Gad~i~--v~pP~~~~-----------~~~~~~~~~~~~va~~~~~piii---- 135 (300)
T 3eb2_A 74 VPVVAG-VASTSVADAVAQAKLYEKLGADGIL--AILEAYFP-----------LKDAQIESYFRAIADAVEIPVVI---- 135 (300)
T ss_dssp SCBEEE-EEESSHHHHHHHHHHHHHHTCSEEE--EEECCSSC-----------CCHHHHHHHHHHHHHHCSSCEEE----
T ss_pred CCEEEE-CCCCCHHHHHHHHHHHHHCCCCEEE--ECCCCCCC-----------CCHHHHHHHHHHHHHCCCCCEEE----
T ss_conf 858994-5766488999999777644981798--52653357-----------77799999999887558996798----
Q ss_pred HHHHHHHHHHCCEEEECHHH--CCCHHHHHHHHHCCCEEEEECC
Q ss_conf 99998765021578822576--2899999998505977998367
Q gi|254780669|r 125 EQQCEAIADSVDILQIPALL--CRQTDLLTAAAQTGRVINVKKG 166 (301)
Q Consensus 125 ~~~~e~~~~~vDilQIgA~~--~rqtdLl~a~a~t~kpV~iKkg 166 (301)
.++|.+. .-..+++..+++....|-+|-.
T Consensus 136 -------------Yn~P~~tg~~l~~~~l~~L~~~~~vvgiK~s 166 (300)
T 3eb2_A 136 -------------YTNPQFQRSDLTLDVIARLAEHPRIRYIKDA 166 (300)
T ss_dssp -------------EECTTTCSSCCCHHHHHHHHTSTTEEEEEEC
T ss_pred -------------EECCCCCCCCCHHHHHHHHCCCCCEEEEECC
T ss_conf -------------7366334777369999997154788997479
No 199
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=30.18 E-value=26 Score=14.88 Aligned_cols=193 Identities=13% Similarity=0.117 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHH
Q ss_conf 63499999999999999965533997066015576886663222456712488899988665287688522889999876
Q gi|254780669|r 52 CQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAI 131 (301)
Q Consensus 52 CsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~ 131 (301)
|.+-+.+. |+.+.+.+.+ .+|++|=+ .|-|-...+.+.++.+.+......--++.-.+++.+..+
T Consensus 6 CGit~~~d----~~~~~~~gad-~iGfif~~----------~SpR~v~~~~a~~i~~~~~~~~~~V~Vf~~~~~~~i~~~ 70 (203)
T 1v5x_A 6 CGITRLED----ALLAEALGAF-ALGFVLAP----------GSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRL 70 (203)
T ss_dssp CCCCCHHH----HHHHHHHTCS-EEEEECCT----------TCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHH
T ss_pred CCCCCHHH----HHHHHHCCCC-EEEEECCC----------CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
T ss_conf 58994999----9999827999-89998279----------989977999999999861798539999776508999999
Q ss_pred H-H-HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCC
Q ss_conf 5-0-2157882257628999999985059779983677789999999999997258780899514654440100000001
Q gi|254780669|r 132 A-D-SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRS 209 (301)
Q Consensus 132 ~-~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~ 209 (301)
. + -.|++|+-.. -..+.+..+.+.-..+-..+-...... ++. .. ..+.+|.+-+.. |.+.- .|..-
T Consensus 71 ~~~~~~d~vQlHg~--e~~~~~~~l~~~~~iik~~~~~~~~~~------~~~-~~-~~~~~L~D~~~~-g~g~~-~~~~~ 138 (203)
T 1v5x_A 71 MEEARLQVAQLHGE--EPPEWAEAVGRFYPVIKAFPLEGPARP------EWA-DY-PAQALLLDGKRP-GSGEA-YPRAW 138 (203)
T ss_dssp HHHTTCSEEEECSC--CCHHHHHHHTTTSCEEEEEECSSSCCG------GGG-GS-SCSEEEEECSST-TSCCC-CCGGG
T ss_pred HHHCCCCEEEECCC--CCHHHHHHHHHCCCCCEEECCCCHHHH------HHH-HH-HHHHEEECCCCC-CCCCC-CCHHH
T ss_conf 87159865442698--798999998622882147535855568------875-21-156414213345-76766-66787
Q ss_pred CHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 06888518716871177742122345321263889999999999718988999836983347978201868899999999
Q gi|254780669|r 210 IPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLS 289 (301)
Q Consensus 210 i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~ 289 (301)
.........|+++ .||-+ .+-|. .++..+..|+=+- ...-..+-.-+++.++++++
T Consensus 139 ~~~~~~~~~p~~L-----------AGGl~---~~NV~----~~~~~~p~gvDvs------SgvE~~~G~KD~~ki~~fi~ 194 (203)
T 1v5x_A 139 AKPLLATGRRVIL-----------AGGIA---PENLE----EVLALRPYALDLA------SGVEEAPGVKSAEKLRALFA 194 (203)
T ss_dssp GHHHHHTTSCEEE-----------CSSCC---STTHH----HHHHHCCSEEEES------GGGEEETTEECHHHHHHHHH
T ss_pred HHHHHHHHCCEEE-----------ECCCC---HHHHH----HHHHCCCCEEEEC------CCEECCCCCCCHHHHHHHHH
T ss_conf 7645663187899-----------88889---79999----9996699889976------84177899649999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780669|r 290 QLLAID 295 (301)
Q Consensus 290 ~l~~i~ 295 (301)
.++.++
T Consensus 195 ~v~~~~ 200 (203)
T 1v5x_A 195 RLASLR 200 (203)
T ss_dssp HHHHTC
T ss_pred HHHHHH
T ss_conf 998765
No 200
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferase, sugar transport, phosphorylation; NMR {Escherichia coli K12} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=29.99 E-value=17 Score=16.11 Aligned_cols=56 Identities=13% Similarity=0.270 Sum_probs=41.2
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEE
Q ss_conf 998866528768852288999987650215788225762899999998505977998
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINV 163 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~i 163 (301)
+++.-++.|+++.-+-....+++...+..|++-++--.....+-+++... ++||.+
T Consensus 23 m~~~a~~~~~~~~i~A~~~~~~~~~~~~~DviLL~PQv~~~~~~i~~~~~-~~pV~v 78 (106)
T 1e2b_A 23 MRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLP-NKPVEV 78 (106)
T ss_dssp HHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECTTSGGGHHHHHHHSS-SSCCCB
T ss_pred HHHHHHHCCCCEEEEEEEHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCC-CCCEEE
T ss_conf 99999987998899994078887524799799986889988999998808-999898
No 201
>2qiw_A PEP phosphonomutase; NP_600288.1, structural genomics, joint center for structural genomics, JCSG; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=29.90 E-value=27 Score=14.85 Aligned_cols=177 Identities=14% Similarity=0.097 Sum_probs=80.2
Q ss_pred HHHHHHHHHHCCEEEEECCCHHHHHHHHH-HCCEEEECHHHCCCH------------HHHHH---HH-HCCCEEEEE--C
Q ss_conf 89998866528768852288999987650-215788225762899------------99999---85-059779983--6
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVHTEQQCEAIAD-SVDILQIPALLCRQT------------DLLTA---AA-QTGRVINVK--K 165 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~~~~~~e~~~~-~vDilQIgA~~~rqt------------dLl~a---~a-~t~kpV~iK--k 165 (301)
.-|++.++.=..-++--++|.-.+..+.+ .+|.++++....-.. +++.. +. .++.|+++- -
T Consensus 10 ~~f~~~~~~g~~l~~p~a~D~~sArl~e~aGf~ai~~s~~~~a~~lG~pD~~~~t~~e~~~~~~~i~~~~~~p~ivD~d~ 89 (255)
T 2qiw_A 10 TKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVES 89 (255)
T ss_dssp HHHHHHHHTCCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTT
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 99999864799189966868999999998599999977599999738999875676788999998870157756997465
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC-----CCCHHHCCCCCCCHHHH-HHCC-CEEECHHHHHHHCCCCCCCC
Q ss_conf 77789999999999997258780899514654-----44010000000106888-5187-16871177742122345321
Q gi|254780669|r 166 GQFLSPWEMHNILQKLHAHGAKDVLFCERGTS-----FGYNTLVTDMRSIPIMT-SMGV-PVIFDASHSVQQPGIHGNCS 238 (301)
Q Consensus 166 gq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~-----fgy~~lvvD~~~i~~lk-~~~~-PVi~D~SHs~q~p~~~~~~~ 238 (301)
|+..++. ..++.+...|..-+.+-.-... ..+...+--.+..-... .... .+|.-=|-+.. .+.+...
T Consensus 90 Gy~~~~~---~~v~~~~~aG~agi~iED~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~i~aRtda~~--~g~~~~~ 164 (255)
T 2qiw_A 90 GYGLSPA---DLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVK--LGADVFE 164 (255)
T ss_dssp CTTCCHH---HHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHH--HCTTTSS
T ss_pred CCCCCHH---HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHH--CCCCCCC
T ss_conf 6553579---9999999999888777503376687555278888999999987643576438985543343--1567540
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHC--C---CCCC-----------CCCCHHHHHHH
Q ss_conf 263889999999999718988999836983347--9---7820-----------18688999999
Q gi|254780669|r 239 GGERQYIVPLAKAAVAIGIAGIFLETHQDPDNA--P---SDGP-----------NMINIKDLPKL 287 (301)
Q Consensus 239 gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~A--l---sD~~-----------q~l~l~~l~~l 287 (301)
.|-.+. ..=+++-..+|+|++|+|.=++++.+ + .+.| ..+++++|.+|
T Consensus 165 ~~~~ea-I~Ra~ay~~AGAd~i~ie~~~s~e~~~~i~~~v~~Pv~~~~~~~~~~~~~~~~~l~~l 228 (255)
T 2qiw_A 165 DPMVEA-IKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGL 228 (255)
T ss_dssp SHHHHH-HHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHHT
T ss_pred HHHHHH-HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHC
T ss_conf 119999-9999999982997899837899999999998649986899834788999989999975
No 202
>3js3_A 3-dehydroquinate dehydratase; AROD, covalent reaction intermediate, amino-acid biosynthesis, aromatic amino acid biosynthesis, lyase; HET: DHS; 2.20A {Clostridium difficile 630}
Probab=29.85 E-value=27 Score=14.85 Aligned_cols=226 Identities=15% Similarity=0.201 Sum_probs=131.2
Q ss_pred CCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC-CCHH
Q ss_conf 177068357877279769970699954863499999999999999965533997066015576886663222456-7124
Q gi|254780669|r 24 TNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGV-GLKK 102 (301)
Q Consensus 24 ~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~-Gle~ 102 (301)
+.+.+++ .++.||++.|. |.-|..-++.+.+++-|+.+...+.++. =|.- +.|... ..++
T Consensus 4 ~~~~~~v----~~~~~g~~~p~--Icv~i~~~t~~e~l~~~~~~~~~~aD~v---ElRl----------D~l~~~~~~~~ 64 (258)
T 3js3_A 4 MKRKVQV----KNITIGEGRPK--ICVPIIGKNKKDIIKEAKELKDACLDII---EWRV----------DFFENVENIKE 64 (258)
T ss_dssp CCCCEEE----TTEEETSSSCE--EEEEECCSSHHHHHHHHHHHTTSSCSEE---EEEG----------GGCTTTTCHHH
T ss_pred CCCCEEE----CCEEECCCCCE--EEEEECCCCHHHHHHHHHHHHHCCCCEE---EEEE----------ECCCCCCCHHH
T ss_conf 6672698----17582799987--9999678998999999998734599989---9986----------03667688999
Q ss_pred HHHHHHHHHHHH-CCEEEEECCCHH-----------HHHH---HH--HHCCEEEECHHHCCC--HHHHHHHHHCCCEEEE
Q ss_conf 888999886652-876885228899-----------9987---65--021578822576289--9999998505977998
Q gi|254780669|r 103 GREIFRDLKKKY-GFPILTDVHTEQ-----------QCEA---IA--DSVDILQIPALLCRQ--TDLLTAAAQTGRVINV 163 (301)
Q Consensus 103 gL~il~e~k~~~-glpv~TeV~~~~-----------~~e~---~~--~~vDilQIgA~~~rq--tdLl~a~a~t~kpV~i 163 (301)
-.+++.++++.+ ++|++--+.... .++. +. ..+|.+-|-.++-.+ .+|++.+.+.+..|.+
T Consensus 65 i~~~l~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDiE~~~~~~~~~~l~~~a~~~~~~vI~ 144 (258)
T 3js3_A 65 VKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVII 144 (258)
T ss_dssp HHHHHHHHHHHHTTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTSCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999973589978999656102898889999999999999980894146888755199999999886616976999
Q ss_pred ECCCC---CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHH--HCCCEEECHHHHHHHCCCCCCCC
Q ss_conf 36777---89999999999997258780899514654440100000001068885--18716871177742122345321
Q gi|254780669|r 164 KKGQF---LSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTS--MGVPVIFDASHSVQQPGIHGNCS 238 (301)
Q Consensus 164 Kkgq~---~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~--~~~PVi~D~SHs~q~p~~~~~~~ 238 (301)
=.+-| .+.+++....+.+...|.+=+-+.=--. .+.+...-+.....+++ ...|+|.=+.=.
T Consensus 145 S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~--~~~D~l~ll~~~~~~~~~~~~~p~I~~~MG~----------- 211 (258)
T 3js3_A 145 SNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQ--NEKDVLVLLEATNEMFKIYADRPIITMSMSG----------- 211 (258)
T ss_dssp EEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCS--SHHHHHHHHHHHHHHHHTTCSSCBEEEECTG-----------
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC--CHHHHHHHHHHHHHHHHHCCCCCEEEEECCC-----------
T ss_conf 994489998899999999999974898699998229--8899999999999998626899889996698-----------
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 263889999999999718988999836983347978201868899999999999
Q gi|254780669|r 239 GGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLL 292 (301)
Q Consensus 239 gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~ 292 (301)
.|+..=+ .+-.+|-.-.|.= -++| -+|-|++.+++..+++-+-
T Consensus 212 ~G~~sRi-----~~~~~GS~~tfa~-~~~~-----sAPGQls~~~l~~~l~~l~ 254 (258)
T 3js3_A 212 MGVISRL-----CGEIFGSALTFGA-AKSV-----SAPGQISFKELNSVLNLLH 254 (258)
T ss_dssp GGTHHHH-----CHHHHCBCEEECB-SSSC-----SSTTCCBHHHHHHHHHHHH
T ss_pred CCHHHHH-----HHHHHCCCEEECC-CCCC-----CCCCCCCHHHHHHHHHHHH
T ss_conf 7759999-----8998689537346-8999-----9999877999999999999
No 203
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma- family, lyase; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=29.48 E-value=27 Score=14.81 Aligned_cols=189 Identities=14% Similarity=0.126 Sum_probs=92.5
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHH--HH-HH--H-HCCEEEECHH
Q ss_conf 65533997066015576886663222456712488899988665287688522889999--87-65--0-2157882257
Q gi|254780669|r 70 ICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQC--EA-IA--D-SVDILQIPAL 143 (301)
Q Consensus 70 ~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~--e~-~~--~-~vDilQIgA~ 143 (301)
.|.++.++...-+--++--+||-+.|... ++..+++..- +.+ .+-+-..+|... |. ++ | ..+.+=-+.=
T Consensus 64 ~G~~~~~~~~t~av~~PIy~sstf~f~~~--~~~~~~~~~~--~~~-~~YsR~gNPT~~~lE~~la~LEg~~~a~~fsSG 138 (445)
T 1qgn_A 64 AGERLGRGIVTDAITTPVVNTSAYFFNKT--SELIDFKEKR--RAS-FEYGRYGNPTTVVLEEKISALEGAESTLLMASG 138 (445)
T ss_dssp TTTTTCCSSCCSBSSCCBCCCSBBCBSSH--HHHHHHHTTS--SCC-CCBGGGCCHHHHHHHHHHHHHHTCSEEEEESCH
T ss_pred CCCCCCCCCCCCCEECCCCCCCCEEECCH--HHHHHHHCCC--CCC-CEECCCCCHHHHHHHHHHHHHHCCCEEEEECCH
T ss_conf 89878999999984388016762671898--9999874387--689-345599887899999999998499738994489
Q ss_pred HCCCHHHHHHHHHCCCEEEEECCCCCCHHHH-------------------HHHHHHHHHCCCCCEEEEECCCCCCCHHHC
Q ss_conf 6289999999850597799836777899999-------------------999999972587808995146544401000
Q gi|254780669|r 144 LCRQTDLLTAAAQTGRVINVKKGQFLSPWEM-------------------HNILQKLHAHGAKDVLFCERGTSFGYNTLV 204 (301)
Q Consensus 144 ~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~-------------------~~a~eki~~~Gn~~i~lcERG~~fgy~~lv 204 (301)
.+-.+-.+.++.+.|..|..=+..+..-..+ ....+......|..+++||-=+..... +
T Consensus 139 MAAi~~~l~al~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~~~~~~~~~~~~~~t~lv~~EspsNP~l~--v 216 (445)
T 1qgn_A 139 MCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPTNPFLR--C 216 (445)
T ss_dssp HHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSCTTTCC--C
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCC--C
T ss_conf 99999999963789998998578877613402321124670344137751188998531466479978888897764--5
Q ss_pred CCCCCCHHH-HHHCCCEEECHHHHH---HHCC----------------C----CCCCCCCCHHHHHHHHHHHHHHCCCEE
Q ss_conf 000010688-851871687117774---2122----------------3----453212638899999999997189889
Q gi|254780669|r 205 TDMRSIPIM-TSMGVPVIFDASHSV---QQPG----------------I----HGNCSGGERQYIVPLAKAAVAIGIAGI 260 (301)
Q Consensus 205 vD~~~i~~l-k~~~~PVi~D~SHs~---q~p~----------------~----~~~~~gG~r~~v~~la~aa~a~G~dGl 260 (301)
+|++.+..+ |+.+.++|+|-|-++ |+|- | .++...++++++..+.......|.
T Consensus 217 ~Di~~ia~lA~~~g~~~vVDNT~atP~~~~Pl~~GADIVvhS~TKyi~Ghsdv~gG~v~~~~~~~~~~~~~~~~~G~--- 293 (445)
T 1qgn_A 217 VDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGG--- 293 (445)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCC---
T ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCEECCEEECCHHHHHHHHCCCCCCCC---
T ss_conf 57699999998749979973685462557742316878998502104787641222342144565555312366677---
Q ss_pred EEEECCCHHHCC
Q ss_conf 998369833479
Q gi|254780669|r 261 FLETHQDPDNAP 272 (301)
Q Consensus 261 fiE~Hp~P~~Al 272 (301)
+.+|..|+
T Consensus 294 ----~lsp~~a~ 301 (445)
T 1qgn_A 294 ----ALNPNAAY 301 (445)
T ss_dssp ----CCCHHHHH
T ss_pred ----CCCHHHHH
T ss_conf ----07889999
No 204
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=29.00 E-value=17 Score=16.22 Aligned_cols=112 Identities=18% Similarity=0.219 Sum_probs=63.3
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHH-HHHHHC-----CEEEECHHHCCCHHHHHHHHHCC-CEEEE--EC-CCCCCHHHHH
Q ss_conf 999886652876885228899998-765021-----57882257628999999985059-77998--36-7778999999
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCE-AIADSV-----DILQIPALLCRQTDLLTAAAQTG-RVINV--KK-GQFLSPWEMH 175 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e-~~~~~v-----DilQIgA~~~rqtdLl~a~a~t~-kpV~i--Kk-gq~~s~~e~~ 175 (301)
.=+++++.+|.+-.-=+..-..+- .+.... |-+=+|++.|.-| +.++...| +||.+ .. -..+++++..
T Consensus 44 fE~~~a~~~g~~~av~~~Sgt~Al~~al~al~~~~gdeVi~p~~t~~a~--~~ai~~~g~~pv~~Di~~~~~~~d~~~l~ 121 (393)
T 1mdo_A 44 LEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVST--LNMIVLLGANPVMVDVDRDTLMVTPEHIE 121 (393)
T ss_dssp HHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHH--HHHHHHTTCEEEEECBCTTTCCBCHHHHH
T ss_pred HHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEECCCCEEHHH--HHHHHCCCCEEEEECCCCCCCCCCHHHHH
T ss_conf 9999999988295999678899999999981999989897179631311--32242379789970254322458899999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHHH
Q ss_conf 99999972587808995146544401000000010688-8518716871177742
Q gi|254780669|r 176 NILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSVQ 229 (301)
Q Consensus 176 ~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~q 229 (301)
+......+-|++++ .||+ ..|+..+..+ |+.++|||-|+.||.-
T Consensus 122 ----~~i~~~tkaii~~h---~~G~---~~d~~~i~~i~~~~~i~lIeD~a~a~g 166 (393)
T 1mdo_A 122 ----AAITPQTKAIIPVH---YAGA---PADLDAIYALGERYGIPVIEDAAHATG 166 (393)
T ss_dssp ----HHCCTTEEEECCBC---GGGC---CCCHHHHHHHHHHHTCCBCEECTTCTT
T ss_pred ----HHHCCCCEEEEECC---CCCC---EECHHHHHHHHHHCCCEEEECCHHHHC
T ss_conf ----74077834997137---6783---316899998887429579972803326
No 205
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=28.98 E-value=28 Score=14.75 Aligned_cols=13 Identities=15% Similarity=0.123 Sum_probs=6.0
Q ss_pred EEECCCCCCCHHH
Q ss_conf 9954863499999
Q gi|254780669|r 47 LIAGPCQIESHDH 59 (301)
Q Consensus 47 iIAGPCsiES~e~ 59 (301)
++.|+..+-=-..
T Consensus 20 ~liG~~~~GKTsl 32 (187)
T 1zj6_A 20 IIVGLDNAGKTTI 32 (187)
T ss_dssp EEEESTTSSHHHH
T ss_pred EEECCCCCCHHHH
T ss_conf 9999999887999
No 206
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=28.96 E-value=24 Score=15.21 Aligned_cols=174 Identities=13% Similarity=0.114 Sum_probs=85.3
Q ss_pred HHHHHHHHHHCCEEEEECCCHHHH-HHHH---HHCCEEEECHHHCCCHHHHHHHHHCC-CEEEEE---CCCCCCHHHHHH
Q ss_conf 899988665287688522889999-8765---02157882257628999999985059-779983---677789999999
Q gi|254780669|r 105 EIFRDLKKKYGFPILTDVHTEQQC-EAIA---DSVDILQIPALLCRQTDLLTAAAQTG-RVINVK---KGQFLSPWEMHN 176 (301)
Q Consensus 105 ~il~e~k~~~glpv~TeV~~~~~~-e~~~---~~vDilQIgA~~~rqtdLl~a~a~t~-kpV~iK---kgq~~s~~e~~~ 176 (301)
+.=+++++.+|.+-.-=+..-..+ ..+. ..=|-+=+|++.|--+- .++-..| +||.+- ....+++++..
T Consensus 56 ~fE~~la~~~g~k~av~~sSGT~AL~lal~al~~~deVivp~~t~~at~--~ai~~~G~~pvfvDid~~t~~~d~~~~~- 132 (424)
T 2po3_A 56 EFEERVAGLAGVRHAVATCNATAGLQLLAHAAGLTGEVIMPSMTFAATP--HALRWIGLTPVFADIDPDTGNLDPDQVA- 132 (424)
T ss_dssp HHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHTCCSEEEEESSSCTHHH--HHHHHTTCEEEEECBCTTTSSBCHHHHG-
T ss_pred HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCHHHH--HHHHHCCCEEEEEEEECCCCCCCHHHHH-
T ss_conf 9999999997829599966779999999997699698998797418459--9999779989998741443568899998-
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHHHH------CC-----------------
Q ss_conf 9999972587808995146544401000000010688-85187168711777421------22-----------------
Q gi|254780669|r 177 ILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSVQQ------PG----------------- 232 (301)
Q Consensus 177 a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~q~------p~----------------- 232 (301)
+....--.-|++.+ .||+ ..|+..+..+ |+.+++||.|++||.-- .|
T Consensus 133 ---~~it~~t~aii~vh---~~G~---~~d~~~i~~iak~~~l~vIEDaA~a~Ga~~~g~~~Gs~Gd~~~fSF~~~K~it 203 (424)
T 2po3_A 133 ---AAVTPRTSAVVGVH---LWGR---PCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVN 203 (424)
T ss_dssp ---GGCCTTEEEEEEEC---GGGC---CCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSC
T ss_pred ---HHHCCCCEEEEEEC---CCCC---CCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCEEECCCCCEEEECCCCCCCCC
T ss_conf ---65135752899854---7787---55588999999982985984004431753299884457653322363124466
Q ss_pred -CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf -3453212638899999999997189889998369833479782018688999999999
Q gi|254780669|r 233 -IHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQ 290 (301)
Q Consensus 233 -~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~ 290 (301)
+.||..--+.+-....++.-...|.|.-..-....-.--+||-..++-+.+|+.+=+.
T Consensus 204 ~geGG~i~t~d~~~~~~~r~~r~~G~~~~~~~~~~g~n~rmsel~Aaigl~qL~~l~~~ 262 (424)
T 2po3_A 204 AFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEV 262 (424)
T ss_dssp CSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 37999243279999999999874585645554446742212288999999986222999
No 207
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii OT3}
Probab=28.78 E-value=28 Score=14.73 Aligned_cols=89 Identities=17% Similarity=0.217 Sum_probs=44.7
Q ss_pred CCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-
Q ss_conf 1578822576289999999850597799836777899999999999972587808995146544401000000010688-
Q gi|254780669|r 135 VDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM- 213 (301)
Q Consensus 135 vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l- 213 (301)
+.++--|.|-.+-.+.+...+..-..+-...+...++.+...+.. ....-+-|.+++-.++.|.- .|+..|..+
T Consensus 98 vlv~~~g~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~h~~t~tG~~---~~i~~I~~~~ 172 (386)
T 2dr1_A 98 VLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALR--KNPDVEAVTITYNETSTGVL---NPLPELAKVA 172 (386)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHH--HCTTCCEEEEESEETTTTEE---CCHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH--CCCCCEEEEEECCCCCCCCC---CCHHHHHHHH
T ss_conf 899726713799999999829863464138887667788998862--38990699998666876767---7768899999
Q ss_pred HHHCCCEEECHHHHH
Q ss_conf 851871687117774
Q gi|254780669|r 214 TSMGVPVIFDASHSV 228 (301)
Q Consensus 214 k~~~~PVi~D~SHs~ 228 (301)
++.+.++++|.+||+
T Consensus 173 ~~~g~~~~vDa~qs~ 187 (386)
T 2dr1_A 173 KEHDKLVFVDAVSAM 187 (386)
T ss_dssp HHTTCEEEEECTTTB
T ss_pred HHCCCEEEEECCHHC
T ss_conf 875985999761203
No 208
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=28.53 E-value=28 Score=14.70 Aligned_cols=153 Identities=14% Similarity=0.194 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHCCEEEEECCCHHHHHHHHH--HCCEEEECH----HHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHH
Q ss_conf 8889998866528768852288999987650--215788225----7628999999985059779983677789999999
Q gi|254780669|r 103 GREIFRDLKKKYGFPILTDVHTEQQCEAIAD--SVDILQIPA----LLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHN 176 (301)
Q Consensus 103 gL~il~e~k~~~glpv~TeV~~~~~~e~~~~--~vDilQIgA----~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~ 176 (301)
-.-.|+++|.. +. =++-++-..++ .+|-|-+=- |.-|..|+..-....+.|.|+.-. .++ +|+.
T Consensus 40 hVAtLRnaRg~-~~------Pd~~~aA~~~~~~GAdgITvHlReDrRHI~d~Dv~~l~~~~~~~lNlE~a--~~~-e~i~ 109 (278)
T 3gk0_A 40 HVATLRNARGT-AY------PDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRVKTRMNLECA--VTP-EMLD 109 (278)
T ss_dssp HHHHHHHHHSS-SC------SCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSCEEEEEC--SSH-HHHH
T ss_pred CEEEECCCCCC-CC------CCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCC--CCH-HHHH
T ss_conf 15420105898-99------99999999999829986895268875657589999999873775577888--709-9999
Q ss_pred HHHHHHHCCCCCEEEE---------ECCCCCCCHHHCCCC-CCCHHHHHHCC--CEEECHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 9999972587808995---------146544401000000-01068885187--16871177742122345321263889
Q gi|254780669|r 177 ILQKLHAHGAKDVLFC---------ERGTSFGYNTLVTDM-RSIPIMTSMGV--PVIFDASHSVQQPGIHGNCSGGERQY 244 (301)
Q Consensus 177 a~eki~~~Gn~~i~lc---------ERG~~fgy~~lvvD~-~~i~~lk~~~~--PVi~D~SHs~q~p~~~~~~~gG~r~~ 244 (301)
.+.++.- +++-|. |.|--+..+.- .+ ..+..+|+.+. -+.+||.-.
T Consensus 110 ia~~~kP---~qvtLVPE~r~elTTegGlDv~~~~~--~L~~~i~~Lk~~gIrVSLFIDPd~~----------------- 167 (278)
T 3gk0_A 110 IACEIRP---HDACLVPEKRSELTTEGGLDVVGHFD--AVRAACKQLADAGVRVSLFIDPDEA----------------- 167 (278)
T ss_dssp HHHHHCC---SEEEECCCSGGGBCSSSSBCTTTTHH--HHHHHHHHHHHTTCEEEEEECSCHH-----------------
T ss_pred HHHHCCC---CEEEECCCCCCCCCCCCCEEEHHHHH--HHHHHHHHHHHCCCCEEEEECCCHH-----------------
T ss_conf 9996699---87998888855545557662062599--9999999999749817998369878-----------------
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999718988999836983347978201868899999999999999988
Q gi|254780669|r 245 IVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDKII 298 (301)
Q Consensus 245 v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~v 298 (301)
...+|...|+| .||-|.-|=-...+ -.+.+.-++++....+..
T Consensus 168 ---qi~~A~~~Gad--~IELhTG~YA~a~~------~~~~~~el~~i~~aa~~A 210 (278)
T 3gk0_A 168 ---QIRAAHETGAP--VIELHTGRYADAHD------AAEQQREFERIATGVDAG 210 (278)
T ss_dssp ---HHHHHHHHTCS--EEEECCHHHHTCSS------HHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHCCCC--EEEEECHHHHCCCC------CCCCHHHHHHHHHHHHHH
T ss_conf ---99998505999--79972335533254------320079999999999999
No 209
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=28.18 E-value=29 Score=14.66 Aligned_cols=81 Identities=20% Similarity=0.196 Sum_probs=48.6
Q ss_pred CCEEEEECCCCCC-----------CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 7069995486349-----------99999999999999655339970660155768866632224567124888999886
Q gi|254780669|r 43 QRFVLIAGPCQIE-----------SHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLK 111 (301)
Q Consensus 43 ~~l~iIAGPCsiE-----------S~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k 111 (301)
.|+||.-|+..-| |.+.+.+.++.+.+.|.+...=+-.=++-.|.. +.-.+|..-|+ -...++.+|
T Consensus 40 ~PiFV~Eg~~~kepI~SMPGv~R~Sid~L~~eie~~~~lGI~aV~LFgvi~~~~Kd~-~gs~A~n~~~l--v~raIr~iK 116 (337)
T 1w5q_A 40 LPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSL-DAAEAYNPEGI--AQRATRALR 116 (337)
T ss_dssp EEEEEESSSSCEEECTTSTTCEEEEHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBS-SCGGGGCTTSH--HHHHHHHHH
T ss_pred EEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCHHCCCCCCH--HHHHHHHHH
T ss_conf 205994089983356899984366899999999999987997899804114666788-85010696328--999999999
Q ss_pred HHH-CCEEEEECCCHH
Q ss_conf 652-876885228899
Q gi|254780669|r 112 KKY-GFPILTDVHTEQ 126 (301)
Q Consensus 112 ~~~-glpv~TeV~~~~ 126 (301)
++| ++-|+|||.-..
T Consensus 117 ~~fp~l~vi~DVcLc~ 132 (337)
T 1w5q_A 117 ERFPELGIITDVCLCE 132 (337)
T ss_dssp HHCTTSEEEEEECSTT
T ss_pred HHHCCEEEEEEECCCC
T ss_conf 8606469997520356
No 210
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=27.95 E-value=29 Score=14.64 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=38.5
Q ss_pred HHHHHHHHC---CCEEEEECCC-------CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH------HCCCCCCCHH
Q ss_conf 999998505---9779983677-------78999999999999725878089951465444010------0000001068
Q gi|254780669|r 149 DLLTAAAQT---GRVINVKKGQ-------FLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNT------LVTDMRSIPI 212 (301)
Q Consensus 149 dLl~a~a~t---~kpV~iKkgq-------~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~------lvvD~~~i~~ 212 (301)
++++++-+. +.||.++=+. ..+++|.+..+.++...|.+ .+-+-.|..+...+ ...++ ...
T Consensus 213 Eii~air~~~g~~~~i~~R~~~~~~~~~~g~~~~e~~~~~~~l~~~gvD-~i~vs~G~~~~~~~~~~~~~~~~~~--a~~ 289 (363)
T 3l5l_A 213 ETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLD-LLSVSVGFTIPDTNIPWGPAFMGPI--AER 289 (363)
T ss_dssp HHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCC-EEEEEECCCSSCCCCCCCTTTTHHH--HHH
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-EEEEECCCCCCCCCCCCCCCCHHHH--HHH
T ss_conf 9999999862667740210573235788986488999999999861876-7998547322676666674200579--999
Q ss_pred HHH-HCCCEEE
Q ss_conf 885-1871687
Q gi|254780669|r 213 MTS-MGVPVIF 222 (301)
Q Consensus 213 lk~-~~~PVi~ 222 (301)
+|+ ...|||.
T Consensus 290 ik~~~~~pvi~ 300 (363)
T 3l5l_A 290 VRREAKLPVTS 300 (363)
T ss_dssp HHHHHTCCEEE
T ss_pred HHHHCCCEEEE
T ss_conf 99865930899
No 211
>3ilk_A Uncharacterized tRNA/RRNA methyltransferase HI0380; APC63004, methylase family protein, haemophilus influenzae RD KW20; 2.01A {Haemophilus influenzae}
Probab=27.85 E-value=29 Score=14.62 Aligned_cols=21 Identities=5% Similarity=-0.027 Sum_probs=13.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 349999999999999996553
Q gi|254780669|r 53 QIESHDHAFMIAEKLYAICQS 73 (301)
Q Consensus 53 siES~e~~~~~A~~lk~~~~~ 73 (301)
-++...-+=.+++.++..|.+
T Consensus 14 ~p~~p~NiGai~Rs~~~fG~~ 34 (244)
T 3ilk_A 14 ETSHSGNIGSAARAMKTMGLT 34 (244)
T ss_dssp SCCSHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHHHHHHCCC
T ss_conf 898867699999999980999
No 212
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, amino-acid biosynthesis cobalamin, precorrin, novel fold; 2.10A {Thermotoga maritima}
Probab=27.83 E-value=29 Score=14.62 Aligned_cols=166 Identities=18% Similarity=0.244 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE--CCCHHHHHHHHH-HCC
Q ss_conf 99999999996553399706601557688666322245671248889998866528768852--288999987650-215
Q gi|254780669|r 60 AFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTD--VHTEQQCEAIAD-SVD 136 (301)
Q Consensus 60 ~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~Te--V~~~~~~e~~~~-~vD 136 (301)
..+.|+.+.+.|++ -++=-..|.+ ...+ | .-+++++++.++..+|+.-- |.+.++++.+.. .+|
T Consensus 32 ~~d~~~~~~~~gad----ei~i~did~~-----~~~~--g--~n~~lI~~I~~~~~iPl~vGGGIr~~ed~~~ll~~Gad 98 (266)
T 2w6r_A 32 LRDWVVEVEKRGAG----EILLTSIDRD-----GTKS--G--YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGAD 98 (266)
T ss_dssp HHHHHHHHHHHTCS----EEEEEETTTS-----SCSS--C--CCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCS
T ss_pred HHHHHHHHHHCCCC----EEEEEEEECC-----CCCC--C--CCHHHHHHHHHEECCEEEECCCCCCCCCHHHHHHHHHH
T ss_conf 79999999987999----8999996087-----5578--8--66777643453248549976772120210033322000
Q ss_pred EEEECHHHCCC----HHHHHHHHHCC----CE---EEEEC--C---------C---CCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 78822576289----99999985059----77---99836--7---------7---789999999999997258780899
Q gi|254780669|r 137 ILQIPALLCRQ----TDLLTAAAQTG----RV---INVKK--G---------Q---FLSPWEMHNILQKLHAHGAKDVLF 191 (301)
Q Consensus 137 ilQIgA~~~rq----tdLl~a~a~t~----kp---V~iKk--g---------q---~~s~~e~~~a~eki~~~Gn~~i~l 191 (301)
-+=|+.-.-.+ .++.+++++.+ +. +-+|+ | + ..++.+| ++++...|...+++
T Consensus 99 kVii~s~~~~~~~~~~~i~~~~~~~gg~~q~IvvsiD~k~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~g~geil~ 175 (266)
T 2w6r_A 99 KALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDW---VVEVEKRGAGEILL 175 (266)
T ss_dssp EEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHH---HHHHHHTTCSEEEE
T ss_pred HEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHH---HHHHHCCCCCEEEE
T ss_conf 001133224551122667899998589864999998767527955899767850168720233---54331558585899
Q ss_pred EEC---CCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 514---654440100000001068885-187168711777421223453212638899999999997189889998
Q gi|254780669|r 192 CER---GTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE 263 (301)
Q Consensus 192 cER---G~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE 263 (301)
+.= |+..|++ +..+..+++ ...|+|+ +||-+.+-. +.. +...|++|..+=
T Consensus 176 t~V~~DGt~~G~d-----~~l~~~i~~~~~~piI~---------------sGGi~s~~d-i~~-l~~~g~~gvi~g 229 (266)
T 2w6r_A 176 TSIDRDGTKSGYD-----TEMIRFVRPLTTLPIIA---------------SGGAGKMEH-FLE-AFLAGADAALAA 229 (266)
T ss_dssp EETTTTTTCSCCC-----HHHHHHHGGGCCSCEEE---------------ESCCCSHHH-HHH-HHHHTCSEEEES
T ss_pred EEECCCCCCCCCC-----HHHHHHHHHCCCCCEEE---------------EECCCCHHH-HHH-HHHCCCCEEEEE
T ss_conf 8887879868876-----79999998618977899---------------947999999-999-997899799980
No 213
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=27.78 E-value=29 Score=14.62 Aligned_cols=99 Identities=11% Similarity=-0.009 Sum_probs=50.8
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCH
Q ss_conf 99954863499999999999999965533997066015576886663222456712488899988665287688522889
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTE 125 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~ 125 (301)
.+|+| ++-.|-+.+.+.|+..++.|.+.. .+.=|.|.+ + ..+.-++-.+.++++.+..++|++-
T Consensus 79 ~vi~g-v~~~s~~~~i~~a~~a~~~G~d~~--lv~pP~y~~--~------~~~~~~~i~~~~~~ia~~~~lpiii----- 142 (309)
T 3fkr_A 79 PVIVT-TSHYSTQVCAARSLRAQQLGAAMV--MAMPPYHGA--T------FRVPEAQIFEFYARVSDAIAIPIMV----- 142 (309)
T ss_dssp CEEEE-CCCSSHHHHHHHHHHHHHTTCSEE--EECCSCBTT--T------BCCCHHHHHHHHHHHHHHCSSCEEE-----
T ss_pred EEEEE-CCCCCHHHHHHHHHHHHHCCCCEE--EECCCCCCC--C------CCCCHHHHHHHHHHHHHHCCCCEEE-----
T ss_conf 08996-787868999999999743499878--854874456--7------7889999999999997224887698-----
Q ss_pred HHHHHHHHHCCEEEECHHHCCC--HHHHHHHHHCCCEEEEECCCCCCHH
Q ss_conf 9998765021578822576289--9999998505977998367778999
Q gi|254780669|r 126 QQCEAIADSVDILQIPALLCRQ--TDLLTAAAQTGRVINVKKGQFLSPW 172 (301)
Q Consensus 126 ~~~e~~~~~vDilQIgA~~~rq--tdLl~a~a~t~kpV~iKkgq~~s~~ 172 (301)
.+.|+....- -++++.+++....+-+|+.-.-+.+
T Consensus 143 ------------Yn~P~~~~~~~~~~l~~~l~~~pnv~gik~~~~~~~~ 179 (309)
T 3fkr_A 143 ------------QDAPASGTALSAPFLARMAREIEQVAYFXIETPGAAN 179 (309)
T ss_dssp ------------EECGGGCCCCCHHHHHHHHHHSTTEEEEEECSSSHHH
T ss_pred ------------ECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHH
T ss_conf ------------5167655777889999998506775899825788499
No 214
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=27.69 E-value=29 Score=14.61 Aligned_cols=111 Identities=14% Similarity=0.087 Sum_probs=62.6
Q ss_pred HHCCCEEEEE--CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH--HHCCCCCCCHHHHHH-----CCCEEECHH
Q ss_conf 5059779983--6777899999999999972587808995146544401--000000010688851-----871687117
Q gi|254780669|r 155 AQTGRVINVK--KGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYN--TLVTDMRSIPIMTSM-----GVPVIFDAS 225 (301)
Q Consensus 155 a~t~kpV~iK--kgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~--~lvvD~~~i~~lk~~-----~~PVi~D~S 225 (301)
...+..+.+- .....+++.+...++++.+.|.+.|.+|.- +|.- +.+ ..-+..+++. ..|+=+ =.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~i~l~DT---~G~~~P~~v--~~~i~~~~~~l~~~~~i~l~~-H~ 204 (293)
T 3ewb_X 131 RQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDT---VGYTNPTEF--GQLFQDLRREIKQFDDIIFAS-HC 204 (293)
T ss_dssp HTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECS---SSCCCHHHH--HHHHHHHHHHCTTGGGSEEEE-EC
T ss_pred HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC---CCCCCCHHH--HHHHHHHHHHHCCCCCCEEEE-CC
T ss_conf 507767998113366763456899999999869979983352---233583789--999999999723202705776-16
Q ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 7742122345321263889999999999718988999836983347978201868899999999
Q gi|254780669|r 226 HSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLS 289 (301)
Q Consensus 226 Hs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~ 289 (301)
| -++-+...-+.+|+.+|++-+ ++=-. .+.-++-..+.+.+-..|.
T Consensus 205 H-------------n~~GlA~aN~laA~~~Gv~~i--D~si~---GlG~~aGN~~tE~lv~~L~ 250 (293)
T 3ewb_X 205 H-------------DDLGMATANALAAIENGARRV--EGTIN---GIGERAGNTALEEVAVALH 250 (293)
T ss_dssp B-------------CTTSCHHHHHHHHHHTTCCEE--EEBGG---GCCTTTCBCBHHHHHHHHH
T ss_pred C-------------CCHHHHHHHHHHHHHHCCCEE--EEECC---CCCCCCCCCCHHHHHHHHH
T ss_conf 8-------------844369999999998398889--55124---4465446830999999999
No 215
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=27.58 E-value=29 Score=14.59 Aligned_cols=116 Identities=14% Similarity=0.177 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHCCEEEEECCCHHHHH-HHHHHC-----CEEEECHHHCCCHHHHHHHHHCC-CEEEE---ECCCCCC
Q ss_conf 24888999886652876885228899998-765021-----57882257628999999985059-77998---3677789
Q gi|254780669|r 101 KKGREIFRDLKKKYGFPILTDVHTEQQCE-AIADSV-----DILQIPALLCRQTDLLTAAAQTG-RVINV---KKGQFLS 170 (301)
Q Consensus 101 e~gL~il~e~k~~~glpv~TeV~~~~~~e-~~~~~v-----DilQIgA~~~rqtdLl~a~a~t~-kpV~i---Kkgq~~s 170 (301)
.+-.+.=+++++.+|.+-+.=+..-..+- .+.... |-+-+|++.|--| +.++...| +||.+ .....++
T Consensus 63 ~~v~~fE~~~a~~~g~k~~v~~~SGT~AL~lal~al~i~~gdeVi~p~~t~~at--~~ai~~~G~~pvf~Dv~~~~~~id 140 (399)
T 2oga_A 63 PELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIAS--WLAVSATGATPVPVEPHEDHPTLD 140 (399)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECBCSSSSSBC
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHH--HHHHHHHCCCEEEEECCCCCCCCC
T ss_conf 779999999999978496999658899999999985999949999799340735--779986148718962333113588
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHH
Q ss_conf 9999999999972587808995146544401000000010688-851871687117774
Q gi|254780669|r 171 PWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSV 228 (301)
Q Consensus 171 ~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~ 228 (301)
+++....+ ...-+-|++.+ .||+ ..|+..+..+ |+.++|||-|+.||.
T Consensus 141 ~~~l~~~i----~~~tkaIi~vh---~~G~---~~d~~~i~~i~k~~~i~vIEDaAqa~ 189 (399)
T 2oga_A 141 PLLVEKAI----TPRTRALLPVH---LYGH---PADMDALRELADRHGLHIVEDAAQAH 189 (399)
T ss_dssp HHHHHHHC----CTTEEEECCBC---GGGC---CCCHHHHHHHHHHHTCEECEECTTCT
T ss_pred HHHHHHHH----CCCCEEEEEEC---CCCC---CCCHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 89999872----76650898527---8898---00369999999973986999773121
No 216
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, cytoplasm, schiff base, carbohydrate metabolism; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 1hl2_A 1fdy_A 1fdz_A 1nal_1
Probab=27.35 E-value=30 Score=14.57 Aligned_cols=27 Identities=7% Similarity=0.199 Sum_probs=14.1
Q ss_pred CCCHHHHHHHHHHHHHH--CCEEEEECCC
Q ss_conf 67124888999886652--8768852288
Q gi|254780669|r 98 VGLKKGREIFRDLKKKY--GFPILTDVHT 124 (301)
Q Consensus 98 ~Gle~gL~il~e~k~~~--glpv~TeV~~ 124 (301)
+..+|-.++++.+.+.. .+|++.-+-.
T Consensus 61 Ls~eEr~~li~~~~~~~~~~~~vi~g~~~ 89 (303)
T 2wkj_A 61 QSLSEREQVLEIVAEEAKGKIKLIAHVGC 89 (303)
T ss_dssp SCHHHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 89999999999999971799878997477
No 217
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 2abb_A* 1vys_X* 1vyp_X*
Probab=26.96 E-value=30 Score=14.52 Aligned_cols=94 Identities=11% Similarity=0.102 Sum_probs=44.9
Q ss_pred HHHHHHHH-CCC-EEEEECCC----------CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHH-
Q ss_conf 99999850-597-79983677----------789999999999997258780899514654440100000001068885-
Q gi|254780669|r 149 DLLTAAAQ-TGR-VINVKKGQ----------FLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTS- 215 (301)
Q Consensus 149 dLl~a~a~-t~k-pV~iKkgq----------~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~- 215 (301)
++++++-+ .+. .|.++... ..+.+|++..++.+...|..-+-+. .|...+.......+ ....|+
T Consensus 216 Eii~aIR~~~g~d~i~~~~~~~~~~~~~~~g~~~~~e~~~~~~~l~~~g~d~~~~s-~~~~~~~~~~~~~~--~~~i~~~ 292 (364)
T 1vyr_A 216 EVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMS-ETDLAGGKPYSEAF--RQKVRER 292 (364)
T ss_dssp HHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEE-CCBTTBCCCCCHHH--HHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC-CCCCCCCCCCHHHH--HHHHHHH
T ss_conf 99999998708665577885032324432367507999999999986598499941-47777787630999--9999997
Q ss_pred HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEE
Q ss_conf 18716871177742122345321263889999999999718-9889998
Q gi|254780669|r 216 MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIG-IAGIFLE 263 (301)
Q Consensus 216 ~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G-~dGlfiE 263 (301)
...||+.- |... +..|-.+++-| +|.+.+-
T Consensus 293 ~~~~vi~~----------------g~~t--~~~ae~~l~~G~aDlV~~g 323 (364)
T 1vyr_A 293 FHGVIIGA----------------GAYT--AEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp CCSEEEEE----------------SSCC--HHHHHHHHHTTSCSEEEES
T ss_pred CCCEEEEC----------------CCCC--HHHHHHHHHCCCCCEEHHH
T ss_conf 38619966----------------8999--9999999987997456553
No 218
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=26.79 E-value=30 Score=14.50 Aligned_cols=205 Identities=15% Similarity=0.236 Sum_probs=110.5
Q ss_pred CCHHHHHHHHHHHHHHH-----HH-CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-----CEEEEECC
Q ss_conf 99999999999999965-----53-399706601557688666322245671248889998866528-----76885228
Q gi|254780669|r 55 ESHDHAFMIAEKLYAIC-----QS-LNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYG-----FPILTDVH 123 (301)
Q Consensus 55 ES~e~~~~~A~~lk~~~-----~~-~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~g-----lpv~TeV~ 123 (301)
.+.+..++-|..+.+-+ ++ +.+|+- ++-+-|.+-|+ ..+ ++--+.+++.+++.+. +++--|-.
T Consensus 246 ~~~~~a~~~a~~~i~eg~~~~GAdIIDIGge--STRPga~~Vs~--eeE--~~Rv~Pvi~~i~~~~~~~~~~v~iSIDT~ 319 (545)
T 2bmb_A 246 ADIESQLNDIIKLCKDALYLHESVIIDVGGC--STRPNSIQASE--EEE--IRRSIPLIKAIRESTELPQDKVILSIDTY 319 (545)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCSCEEEEEECS--CCSTTCCCCCH--HHH--HHHHHHHHHHHHHCSSSCGGGEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCEEEECCE--ECCCCCCCCCH--HHH--HHHHHHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 7789999999999970323269948997966--08997982899--999--99899999999975003567844888688
Q ss_pred CHHHHHHHHH-HCCEEE-ECHHHCCCHHHHHHHHHC-CCEEEEE--CCC--CC---------------------------
Q ss_conf 8999987650-215788-225762899999998505-9779983--677--78---------------------------
Q gi|254780669|r 124 TEQQCEAIAD-SVDILQ-IPALLCRQTDLLTAAAQT-GRVINVK--KGQ--FL--------------------------- 169 (301)
Q Consensus 124 ~~~~~e~~~~-~vDilQ-IgA~~~rqtdLl~a~a~t-~kpV~iK--kgq--~~--------------------------- 169 (301)
.++-++.+.+ .+||+- |-++.. .-.++..+++. ..++.+- +|- .|
T Consensus 320 ~~~Va~~Al~~Ga~iINDVsgg~~-d~~~~~v~a~~~~~~~ilmH~~g~p~~m~~~~~y~~~~~~~~~~~~~~~~~~~~~ 398 (545)
T 2bmb_A 320 RSNVAKEAIKVGVDIINDISGGLF-DSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQ 398 (545)
T ss_dssp CHHHHHHHHHTTCCEEEETTTTSS-CTTHHHHHHTCTTSEEEEECCCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGG
T ss_pred CHHHHHHHHHCCCCEEECCCCCCC-CCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHH
T ss_conf 899999999759869971123555-5046666432342025420257985554456766542112100111013320232
Q ss_pred ------------CH-HHHHHHHHHHHHCCCC-CEEEEECCCCCCCHH--HCCCCCCCHHHHHH----------------C
Q ss_conf ------------99-9999999999725878-089951465444010--00000010688851----------------8
Q gi|254780669|r 170 ------------SP-WEMHNILQKLHAHGAK-DVLFCERGTSFGYNT--LVTDMRSIPIMTSM----------------G 217 (301)
Q Consensus 170 ------------s~-~e~~~a~eki~~~Gn~-~i~lcERG~~fgy~~--lvvD~~~i~~lk~~----------------~ 217 (301)
.. .++...++++.+.|.+ +=|+..=|+-||-+. ..-=+++++.++++ +
T Consensus 399 ~~~~~~~~~vv~~v~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~l~~lg~~~~~~~~~~~~~~~~ 478 (545)
T 2bmb_A 399 LDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRN 478 (545)
T ss_dssp STTHHHHCHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHTTEEEEEEETTEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 10122223689999999999999999869985678996898878987999999977699974475311221000124679
Q ss_pred CCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHH--HHHHCCCEEEEEECCCHH
Q ss_conf 7168711777421223453212638899999999--997189889998369833
Q gi|254780669|r 218 VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKA--AVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 218 ~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~a--a~a~G~dGlfiE~Hp~P~ 269 (301)
+||.+-+|.=-..-.-.+......|.+ .++|-+ |+..|++ ++-||.-.+
T Consensus 479 ~PvLvG~SRKsfig~l~~~~~~~~R~~-~T~a~~~~a~~~Ga~--IvRVHDV~e 529 (545)
T 2bmb_A 479 MPVLLGPSRKKFIGHITKDVDAKQRDF-ATGAVVASCIGFGSD--MVRVHDVKN 529 (545)
T ss_dssp CCBEECCTTCHHHHHHHTCCSGGGGHH-HHHHHHHHHHHTTCS--EEEESCHHH
T ss_pred CEEEEEECCCHHHHHHHCCCCHHHHHH-HHHHHHHHHHHCCCC--EEEECCHHH
T ss_conf 628999653189998728998688709-999999999987998--999389899
No 219
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=26.78 E-value=30 Score=14.50 Aligned_cols=87 Identities=20% Similarity=0.153 Sum_probs=48.9
Q ss_pred HCCEEEECHHHCCCHHHHHHHHHCCCEE---EEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCC
Q ss_conf 2157882257628999999985059779---9836777899999999999972587808995146544401000000010
Q gi|254780669|r 134 SVDILQIPALLCRQTDLLTAAAQTGRVI---NVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSI 210 (301)
Q Consensus 134 ~vDilQIgA~~~rqtdLl~a~a~t~kpV---~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i 210 (301)
.+.+...+.+--+- ...+.+.+..+ ...-+...+..+.. +......-+-|.+++=-++.|.- .|+..|
T Consensus 96 ~v~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~~~~~~tG~~---~pi~~I 166 (393)
T 2huf_A 96 VILIGHTGHWGDRS---ADMATRYGADVRVVKSKVGQSLSLDEIR---DALLIHKPSVLFLTQGDSSTGVL---QGLEGV 166 (393)
T ss_dssp EEEEEESSHHHHHH---HHHHHHTTCEEEEEECCTTCCCCHHHHH---HHHHHHCCSEEEEESEETTTTEE---CCCTTH
T ss_pred EEEEEECCHHHHHH---HHHHHHCCCEEEECCCCCCCCCCHHHHH---HHHHCCCCEEEEEECCCCCCCCC---CCHHHH
T ss_conf 68996154588899---9999983990673245578866859999---98505896599998757887424---788999
Q ss_pred HH-HHHHCCCEEECHHHHHH
Q ss_conf 68-88518716871177742
Q gi|254780669|r 211 PI-MTSMGVPVIFDASHSVQ 229 (301)
Q Consensus 211 ~~-lk~~~~PVi~D~SHs~q 229 (301)
-. .++.+.++++|.+||.-
T Consensus 167 ~~~~~~~g~l~~vDa~qa~g 186 (393)
T 2huf_A 167 GALCHQHNCLLIVDTVASLG 186 (393)
T ss_dssp HHHHHHTTCEEEEECTTTBT
T ss_pred HHHHHHCCCEEEEECHHHCC
T ss_conf 99999769859997513217
No 220
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=26.73 E-value=22 Score=15.41 Aligned_cols=67 Identities=12% Similarity=0.182 Sum_probs=37.0
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEE-ECHHHCCCHHHHHHH
Q ss_conf 9706601557688666322245671248889998866528768852288999987650215788-225762899999998
Q gi|254780669|r 76 IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQ-IPALLCRQTDLLTAA 154 (301)
Q Consensus 76 ~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQ-IgA~~~rqtdLl~a~ 154 (301)
++.-|.+.-+.|=+- .-+|.| +.++.|.+.+ ++.|+||+.+.--.+ .+...+++-| ||. +|.+++
T Consensus 6 VAL~Y~~~~~~aP~V---vAkG~g-~~A~~I~~~A-~~~gIPiv~~~~LAr---~L~~~~~~g~~IP~------ely~aV 71 (93)
T 2vt1_B 6 IGIYFNPEIAPAPFI---SLIETN-QCALAVRKYA-NEVGIPTVRDVKLAR---KLYKTHTKYSFVDF------EHLDEV 71 (93)
T ss_dssp EEEECCTTTCSSCEE---EEEEEH-HHHHHHHHHH-HHTTCCEEECHHHHH---HHHHHCCSSEECCT------TTHHHH
T ss_pred EEEEECCCCCCCCEE---EEECCC-HHHHHHHHHH-HHCCCCEEECHHHHH---HHHHCCCCCCCCCH------HHHHHH
T ss_conf 999857899989999---985185-9999999999-985998884999999---99974889881789------999999
Q ss_pred HH
Q ss_conf 50
Q gi|254780669|r 155 AQ 156 (301)
Q Consensus 155 a~ 156 (301)
|+
T Consensus 72 A~ 73 (93)
T 2vt1_B 72 LR 73 (93)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 221
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfuration; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=26.26 E-value=31 Score=14.44 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=66.1
Q ss_pred CCEEEECHHHCCC-HHHHHHHH-HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHH
Q ss_conf 1578822576289-99999985-059779983677789999999999997258780899514654440100000001068
Q gi|254780669|r 135 VDILQIPALLCRQ-TDLLTAAA-QTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPI 212 (301)
Q Consensus 135 vDilQIgA~~~rq-tdLl~a~a-~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~ 212 (301)
=|-+.++...--- +.|++..- +.|.-+ .--....++++..+. ..+..++.||-=+... -.+.|+..+..
T Consensus 171 Gd~VV~~~~lYg~T~~ll~~~~~~~Gi~v--~~vd~~d~e~~~~ai-----~~~TklVf~EspsNP~--l~v~DI~~ia~ 241 (464)
T 1ibj_A 171 GEEIVAGDDVYGGSDRLLSQVVPRSGVVV--KRVNTTKLDEVAAAI-----GPQTKLVWLESPTNPR--QQISDIRKISE 241 (464)
T ss_dssp TCEEEEESSCCHHHHHHHHHTSGGGTCEE--EEECTTSHHHHHHHC-----CSSEEEEEECSSCTTT--CCCCCHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCCC--EECCCCCCHHHHHHH-----CCCCEEEEECCCCCCC--CCHHHHHHHHH
T ss_conf 99899908978479999999997478652--333874203466651-----6672499924899974--41443799999
Q ss_pred H-HHHCCCEEECHHHHH---HHC----------------CCCCCCCCC-----CHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 8-851871687117774---212----------------234532126-----388999999999971898899983698
Q gi|254780669|r 213 M-TSMGVPVIFDASHSV---QQP----------------GIHGNCSGG-----ERQYIVPLAKAAVAIGIAGIFLETHQD 267 (301)
Q Consensus 213 l-k~~~~PVi~D~SHs~---q~p----------------~~~~~~~gG-----~r~~v~~la~aa~a~G~dGlfiE~Hp~ 267 (301)
+ ++.+.|+|+|-|-++ |+| +|.++..|| ..++...+.......|. ++.
T Consensus 242 iA~~~gi~lVVDNT~aTP~~~~PL~~GADIVvhS~TKyisGhsDv~gG~vv~~~~~l~~~l~~~~~~~G~-------~ls 314 (464)
T 1ibj_A 242 MAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGS-------GLA 314 (464)
T ss_dssp HHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTC-------BCC
T ss_pred HHHHCCCEEEEECCCCCCCEECCCCCCCCEEEEECCEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCC-------CCC
T ss_conf 9876398699989854653504555588889973550133774555762124769999999987415788-------558
Q ss_pred HHHC
Q ss_conf 3347
Q gi|254780669|r 268 PDNA 271 (301)
Q Consensus 268 P~~A 271 (301)
|..|
T Consensus 315 p~da 318 (464)
T 1ibj_A 315 PFDC 318 (464)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 7789
No 222
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate- loop, pyridoxal phosphate, selenocysteine synthase (SECS; HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=26.21 E-value=31 Score=14.44 Aligned_cols=105 Identities=10% Similarity=0.159 Sum_probs=56.0
Q ss_pred CHHHHHHHHHCC-CEEEEEC---C--CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCC
Q ss_conf 999999985059-7799836---7--77899999999999972587808995146544401000000010688-851871
Q gi|254780669|r 147 QTDLLTAAAQTG-RVINVKK---G--QFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVP 219 (301)
Q Consensus 147 qtdLl~a~a~t~-kpV~iKk---g--q~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~P 219 (301)
+....+++.-.| +|+.+.. + ..++++++..+++..... +.-++++.=++ |.+.. +-|+..|..+ ++++.+
T Consensus 154 H~s~~k~~~~~g~~~~~v~~~~~~~~~~id~~~l~~~i~~~~~~-~~~~v~~~~~~-~~~g~-~~~~~~i~~~~~~~~~~ 230 (450)
T 3bc8_A 154 QKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPE-HILCLHSTTAC-FAPRV-PDRLEELAVICANYDIP 230 (450)
T ss_dssp CHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGG-GEEEEEEESSC-CTTBC-CCCHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHCCCEEEEEEEECCHHCCCCCHHHHHHHHHHHCCC-CEEEEEEECCC-CCCCE-ECCHHHHHHHHHHHCCE
T ss_conf 18899999983996799973034021483999999999874466-52799983787-78856-43599999999983994
Q ss_pred EEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 6871177742122345321263889999999999718988999836
Q gi|254780669|r 220 VIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETH 265 (301)
Q Consensus 220 Vi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~H 265 (301)
+++|.-|+. |-.-+......+.-..++|.+-.-.|
T Consensus 231 l~vD~A~~~-----------~~~~~~~~~~~~~~~~~~d~~~~s~h 265 (450)
T 3bc8_A 231 HVVNNAYGL-----------QSSKCMHLIQQGARVGRIDAFVQSLD 265 (450)
T ss_dssp EEEECTTTT-----------TCHHHHHHHHHHHHHSCCCEEEEEHH
T ss_pred EEEECCCHH-----------HCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 999664455-----------40023444532345677525995387
No 223
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=25.95 E-value=31 Score=14.40 Aligned_cols=52 Identities=13% Similarity=0.080 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHCCEEEE--ECCCHHHHHHH-HH-HCCEEEECHHHCCCHHHHHHHH
Q ss_conf 88999886652876885--22889999876-50-2157882257628999999985
Q gi|254780669|r 104 REIFRDLKKKYGFPILT--DVHTEQQCEAI-AD-SVDILQIPALLCRQTDLLTAAA 155 (301)
Q Consensus 104 L~il~e~k~~~glpv~T--eV~~~~~~e~~-~~-~vDilQIgA~~~rqtdLl~a~a 155 (301)
....+.+|+.+++||+. -+++++.++.+ .+ .+|++-+|--+..+.||...+.
T Consensus 283 ~~~~~~~~~~~~~pvi~~G~i~~~~~ae~~l~~g~~D~v~~gR~~iadPd~~~k~~ 338 (690)
T 3k30_A 283 EEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIR 338 (690)
T ss_dssp HHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHCHHHHHCHHHHHHHH
T ss_conf 89999986303687797589689999999998799765022569872948999998
No 224
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=25.85 E-value=31 Score=14.39 Aligned_cols=60 Identities=10% Similarity=0.093 Sum_probs=40.4
Q ss_pred HHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHH-HHHHHCCCEEEEECC
Q ss_conf 998866528768852288999987650215788225762899999-998505977998367
Q gi|254780669|r 107 FRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLL-TAAAQTGRVINVKKG 166 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl-~a~a~t~kpV~iKkg 166 (301)
+++.-++.|+++.-+-....+++...+..|++-++--....++=+ +.+++.+.||.+=.+
T Consensus 26 m~~~a~~~~~~~~v~A~~~~~~~~~~~~~DviLL~PQv~~~~~~i~~~~~~~~ipv~~I~~ 86 (108)
T 3nbm_A 26 INEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRG 86 (108)
T ss_dssp HHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEEECCH
T ss_pred HHHHHHHCCCCEEEEEEEHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEECH
T ss_conf 9999997699789999538999988642899998667999999999998773992887287
No 225
>2pod_A Mandelate racemase / muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.34A {Burkholderia pseudomallei K96243}
Probab=25.74 E-value=32 Score=14.38 Aligned_cols=58 Identities=12% Similarity=0.073 Sum_probs=29.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHH-HCCCEEEC
Q ss_conf 59779983677789999999999997258780899514654440100000001068885-18716871
Q gi|254780669|r 157 TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTS-MGVPVIFD 223 (301)
Q Consensus 157 t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~-~~~PVi~D 223 (301)
.+..+++--.+..++++-+..+..+... ++...|-=.. +. |+..+..+++ +..|+..|
T Consensus 213 ~~~~l~~D~n~~~~~~~A~~~~~~l~~~---~l~~~EeP~~--~~----d~~~~~~l~~~~~~pIa~g 271 (410)
T 2pod_A 213 DKMDVMVEFHSLWNLPPALQIAEALREY---ETFWHEDPIR--MD----SLSSLKRYAERSLAPVCAS 271 (410)
T ss_dssp GGCEEEEECTTCCCHHHHHHHHHHHGGG---TCSEEESCSC--SS----SGGGHHHHHHTCSSCEEEC
T ss_pred CCCHHHHHHCCCCCHHHHHHHHHHHCCC---CCCCCCCCCC--CC----CHHHHHHHHHHCCCCCCCC
T ss_conf 6503344312248989999999875112---3322468644--22----1899999997227986466
No 226
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=25.74 E-value=32 Score=14.38 Aligned_cols=123 Identities=9% Similarity=0.006 Sum_probs=49.6
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHH--CCEEEEECC
Q ss_conf 5486349999999999999996553399706601557688666322---24567124888999886652--876885228
Q gi|254780669|r 49 AGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAG---KRGVGLKKGREIFRDLKKKY--GFPILTDVH 123 (301)
Q Consensus 49 AGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~s---frG~Gle~gL~il~e~k~~~--glpv~TeV~ 123 (301)
.|.-...|.|...+.|+.+.+.| .+.+=+|....-........ ......++-++.++.+++.+ ++.+.-|.+
T Consensus 142 ~~~~~~~s~e~~~~~a~~~~~~G---f~~~Kikvg~~~~~~~~~~~~~~~~~~d~~~di~~v~avr~~~G~~~~l~vDaN 218 (410)
T 2qq6_A 142 GGLFEEGSNEEYIAVAREAVERG---FDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMH 218 (410)
T ss_dssp CCTTCSTHHHHHHHHHHHHHHTT---CSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CCCCCCCCHHHHHHHHHHHHHCC---CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf 04444589999999999999779---988997136767753333335677836589999999999997398542642666
Q ss_pred CHHHHHH-------HHHH-CCEEEECHHHCCCHHHHHHHHH-CCCEEEEECCCCCCHHHHHH
Q ss_conf 8999987-------6502-1578822576289999999850-59779983677789999999
Q gi|254780669|r 124 TEQQCEA-------IADS-VDILQIPALLCRQTDLLTAAAQ-TGRVINVKKGQFLSPWEMHN 176 (301)
Q Consensus 124 ~~~~~e~-------~~~~-vDilQIgA~~~rqtdLl~a~a~-t~kpV~iKkgq~~s~~e~~~ 176 (301)
.....+. +.++ +..+.-|- ...+.+-+.++.+ +..||..=- ...+++++..
T Consensus 219 ~~~~~~~Ai~~~~~l~~~~i~~~EeP~-~~~d~~~~~~l~~~~~ipIa~gE-~~~~~~~~~~ 278 (410)
T 2qq6_A 219 GRFDIPSSIRFARAMEPFGLLWLEEPT-PPENLDALAEVRRSTSTPICAGE-NVYTRFDFRE 278 (410)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEECCS-CTTCHHHHHHHHTTCSSCEEECT-TCCSHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCCCEEECCC-CCCCHHHHHHHHHCCCCCEECCC-CCCCHHHHHH
T ss_conf 678989999999985100333575688-85378889999871467554685-4478889777
No 227
>3dlu_A SRP19, signal recognition particle 19 kDa protein; protein-RNA, cytoplasm, ribonucleoprotein, RNA-binding, RNA binding protein; 1.80A {Pyrococcus furiosus} PDB: 3dlv_B
Probab=25.60 E-value=28 Score=14.67 Aligned_cols=50 Identities=18% Similarity=0.108 Sum_probs=26.0
Q ss_pred CCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE---ECCC
Q ss_conf 7168711777421223453212638899999999997189889998---3698
Q gi|254780669|r 218 VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE---THQD 267 (301)
Q Consensus 218 ~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE---~Hp~ 267 (301)
+|.-||.+.|...=---.-..+-..--+..++.|+-.+|.+-+.+| .||.
T Consensus 7 yP~Y~Ds~~tr~eGRRV~k~~aV~~P~~~EI~~a~~~lgl~~~~iE~~K~yPr 59 (106)
T 3dlu_A 7 WPSELDSRLSRKYGRIVPRSIAVESPRVEEIVRAAEELKFKVIRVEEDKLNPR 59 (106)
T ss_dssp CGGGGBTTSCGGGTCCSCTTTSBSSCCHHHHHHHHHHTTCEEEEEEEEEECC-
T ss_pred ECCHHCCCCCHHHCCCCCHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCCC
T ss_conf 56232488874515735888966698999999999984997076055788985
No 228
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=25.42 E-value=32 Score=14.34 Aligned_cols=26 Identities=19% Similarity=0.106 Sum_probs=11.8
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 89999999999997258780899514
Q gi|254780669|r 169 LSPWEMHNILQKLHAHGAKDVLFCER 194 (301)
Q Consensus 169 ~s~~e~~~a~eki~~~Gn~~i~lcER 194 (301)
+++++|+.-+++.++.|...||+=.|
T Consensus 145 ~~~~~~i~~~~~~LeaGA~~ViiEar 170 (251)
T 1qwg_A 145 LTIDDRIKLINFDLDAGADYVIIEGR 170 (251)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEHH
T ss_conf 69999999999999668817886223
No 229
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=25.11 E-value=32 Score=14.30 Aligned_cols=149 Identities=10% Similarity=0.166 Sum_probs=75.6
Q ss_pred HHHHCCEEEE-EC------CCHHHHHHHHHHCCEEEECHHHCCCH-HHHHHHHHCCCEEEEECCC---------CCCHHH
Q ss_conf 6652876885-22------88999987650215788225762899-9999985059779983677---------789999
Q gi|254780669|r 111 KKKYGFPILT-DV------HTEQQCEAIADSVDILQIPALLCRQT-DLLTAAAQTGRVINVKKGQ---------FLSPWE 173 (301)
Q Consensus 111 k~~~glpv~T-eV------~~~~~~e~~~~~vDilQIgA~~~rqt-dLl~a~a~t~kpV~iKkgq---------~~s~~e 173 (301)
-+++|+.++. .. .+-.....++.-+.+=++|.....+. +.+.++.+.|=||+||-.. --+.+|
T Consensus 108 l~~~gI~~iGps~~~I~~~~Dr~~~r~~m~~~gvPv~~s~~v~s~eea~~~A~~IGyPViIrps~~~GG~Gm~iv~~~~e 187 (1073)
T 1a9x_A 108 LEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREE 187 (1073)
T ss_dssp HHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEEEESSHHHHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHH
T ss_pred HHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCHHH
T ss_conf 78779889889999999725999999999977999899722089999999998659988999787789987607779999
Q ss_pred HHHHHHHH-HHCCCCCEEEEECCCC-----------CCCHHHCC--CCCCCHHHH-HHCCCEEECHHHHHHHCCCCCCCC
Q ss_conf 99999999-7258780899514654-----------44010000--000106888-518716871177742122345321
Q gi|254780669|r 174 MHNILQKL-HAHGAKDVLFCERGTS-----------FGYNTLVT--DMRSIPIMT-SMGVPVIFDASHSVQQPGIHGNCS 238 (301)
Q Consensus 174 ~~~a~eki-~~~Gn~~i~lcERG~~-----------fgy~~lvv--D~~~i~~lk-~~~~PVi~D~SHs~q~p~~~~~~~ 238 (301)
+..+++.- ..+|+.+| +.||=.. -+++|.+. -+-++.-+. .++.-+.+=|+..+ +
T Consensus 188 L~~~~~~a~~~s~~~~v-liEk~i~g~keIEvqVlrD~~gn~i~v~~~E~~d~~GihtgdsI~vaPa~tL---------~ 257 (1073)
T 1a9x_A 188 FEEICARGLDLSPTKEL-LIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTL---------T 257 (1073)
T ss_dssp HHHHHHHHHHHCTTSCE-EEEECCTTSEEEEEEEEECTTCCEEEEEEEEESSCTTSCGGGSCEEESCCSC---------C
T ss_pred HHHHHHHHHHHCCCCCE-EEEEECCCCEEEEEEEEECCCCCEEEEEECHHHHHHCCCCCCEEEEECCCCC---------C
T ss_conf 99999999973899867-9998517855899999871799889994101133420224660488127638---------9
Q ss_pred CCC-HHHHHHHHHHHHHHCCC-EEE-EEECCCHH
Q ss_conf 263-88999999999971898-899-98369833
Q gi|254780669|r 239 GGE-RQYIVPLAKAAVAIGIA-GIF-LETHQDPD 269 (301)
Q Consensus 239 gG~-r~~v~~la~aa~a~G~d-Glf-iE~Hp~P~ 269 (301)
.-. ..+-..--+.+-++|+. |.. +|---||+
T Consensus 258 d~~~q~lr~aA~kia~~l~~~~gg~nVqFa~d~~ 291 (1073)
T 1a9x_A 258 DKEYQIMRNASMAVLREIGVETGGSNVQFAVNPK 291 (1073)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf 9999999999999999749433663369987489
No 230
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=25.00 E-value=33 Score=14.29 Aligned_cols=64 Identities=8% Similarity=0.092 Sum_probs=31.1
Q ss_pred ECCCHHHHH----HHHHHCCEEEECHHHCCC--HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 228899998----765021578822576289--9999998505977998367778999999999999725
Q gi|254780669|r 121 DVHTEQQCE----AIADSVDILQIPALLCRQ--TDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 121 eV~~~~~~e----~~~~~vDilQIgA~~~rq--tdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~ 184 (301)
|+.+..++. .+.++++++-||.-+.-+ .++++++.+.+.+|.+-+=.+=-|.-+..+++.+...
T Consensus 11 D~~~~~~al~l~~~l~~~i~~iKig~~l~~~~G~~~i~~l~~~~~~If~D~K~~DIgnTv~~~~~~~~~~ 80 (239)
T 1dbt_A 11 DFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASL 80 (239)
T ss_dssp CCSSHHHHHHHTGGGTTSCCEEEECHHHHHHHTHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEECHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 1699999999999828865099988999963498999999976982999851147478999998744125
No 231
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=24.93 E-value=33 Score=14.28 Aligned_cols=72 Identities=21% Similarity=0.283 Sum_probs=31.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC--CC-----
Q ss_conf 63499999999999999965533997066015576886663222456712488899988665287688522--88-----
Q gi|254780669|r 52 CQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDV--HT----- 124 (301)
Q Consensus 52 CsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV--~~----- 124 (301)
|=+.+.+.++++++.+... -.+||- -+-. |- ..|.+..+++++ ++.+|.-|. ||
T Consensus 11 LD~~~~~~al~i~~~~~~~------i~~iKi------G~~l--~~----~~G~~~i~~l~~-~~~~If~DlK~~DIgnTv 71 (246)
T 2yyu_A 11 LDFPSKQEVERFLRPFAGT------PLFVKV------GMEL--YY----QEGPAIVAFLKE-QGHAVFLDLKLHDIPNTV 71 (246)
T ss_dssp CCCSSHHHHHHHHGGGTTS------CCEEEE------CHHH--HH----HHTHHHHHHHHH-TTCEEEEEEEECSCHHHH
T ss_pred ECCCCHHHHHHHHHHHCCC------CEEEEE------CHHH--HH----HHCHHHHHHHHH-CCCCEEEEEECCCHHHHH
T ss_conf 6589999999999982885------409998------9899--86----409999999997-499889996325628999
Q ss_pred HHHHHHHHH-HCCEEEECH
Q ss_conf 999987650-215788225
Q gi|254780669|r 125 EQQCEAIAD-SVDILQIPA 142 (301)
Q Consensus 125 ~~~~e~~~~-~vDilQIgA 142 (301)
..++..+.+ .+|++=+-+
T Consensus 72 ~~~~~~~~~~~~d~~tvh~ 90 (246)
T 2yyu_A 72 KQAMKGLARVGADLVNVHA 90 (246)
T ss_dssp HHHHHHHHHTTCSEEEEEG
T ss_pred HHHHHHHHHCCCEEEEEEC
T ss_conf 9999999852872999945
No 232
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=24.91 E-value=33 Score=14.28 Aligned_cols=47 Identities=6% Similarity=-0.102 Sum_probs=19.0
Q ss_pred HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 21578822576289999999850597799836777899999999999
Q gi|254780669|r 134 SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQK 180 (301)
Q Consensus 134 ~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~ek 180 (301)
-+|++=+-+=+-...+.+.++-+.|+.|..-++.+..+.|+....+.
T Consensus 58 ~~Dvvii~tp~~~~~~~~~~~l~~G~~VV~~~~~~~~~~e~~~~l~~ 104 (320)
T 1f06_A 58 DVDVLFLCMGSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNE 104 (320)
T ss_dssp TCSEEEECSCTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHH
T ss_conf 79999987897168999999998699999828875658789999999
No 233
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=24.86 E-value=33 Score=14.27 Aligned_cols=23 Identities=22% Similarity=0.567 Sum_probs=15.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCEEE
Q ss_conf 56712488899988665287688
Q gi|254780669|r 97 GVGLKKGREIFRDLKKKYGFPIL 119 (301)
Q Consensus 97 G~Gle~gL~il~e~k~~~glpv~ 119 (301)
|+++++-..+.+++++.|-++|-
T Consensus 63 Gi~~~~h~~iq~~I~~~~Pv~vs 85 (268)
T 2qv6_A 63 GIDLITHKRIQESIRNRYPFTVS 85 (268)
T ss_dssp TCCHHHHHHHHHHHHHHSSSCEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 99979999999998635881379
No 234
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=24.50 E-value=33 Score=14.23 Aligned_cols=134 Identities=15% Similarity=0.162 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHCCEEEEEC----CCHH-HHHHH-HHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHH
Q ss_conf 8899988665287688522----8899-99876-5021578822576289999999850597799836777899999999
Q gi|254780669|r 104 REIFRDLKKKYGFPILTDV----HTEQ-QCEAI-ADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNI 177 (301)
Q Consensus 104 L~il~e~k~~~glpv~TeV----~~~~-~~e~~-~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a 177 (301)
-+.++++++..+-|+-..+ ...+ .++.+ .+.++++...+.+-. ++++.+...+..|...-+ ++.+..
T Consensus 52 ~~~i~~~r~~t~~p~gvn~~~~~~~~~~~~~~~~~~~v~~v~~~~g~p~--~~~~~~~~~g~~v~~~v~---~~~~A~-- 124 (332)
T 2z6i_A 52 KANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNPS--KYMERFHEAGIIVIPVVP---SVALAK-- 124 (332)
T ss_dssp HHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSCGG--GTHHHHHHTTCEEEEEES---SHHHHH--
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCH--HHHHHHHHHCCEEEECCC---CHHHHH--
T ss_conf 9999999984169705512058888799999998669988998288979--999999970988985587---889999--
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 99997258780899514654440100000001068885-18716871177742122345321263889999999999718
Q gi|254780669|r 178 LQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIG 256 (301)
Q Consensus 178 ~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G 256 (301)
+....|.+-+ +++-.-.-|.......+.-+|.+++ ...|||.. |+.. ..+.. .+|+++|
T Consensus 125 --~a~~~g~D~l-v~qG~eaGGH~g~~~~~~L~~~v~~~~~vPviaA-----------GGI~-dg~~~-----aaal~lG 184 (332)
T 2z6i_A 125 --RMEKIGADAV-IAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAA-----------GGIA-DGEGA-----AAGFMLG 184 (332)
T ss_dssp --HHHHTTCSCE-EEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEE-----------SSCC-SHHHH-----HHHHHTT
T ss_pred --HHHHHCCCEE-EEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE-----------CCCC-CHHHH-----HHHHHCC
T ss_conf --9998689989-9867876788755651125567775068435752-----------3354-28899-----9999759
Q ss_pred CCEEEEEE
Q ss_conf 98899983
Q gi|254780669|r 257 IAGIFLET 264 (301)
Q Consensus 257 ~dGlfiE~ 264 (301)
++|+.+-|
T Consensus 185 A~gV~~GT 192 (332)
T 2z6i_A 185 AEAVQVGT 192 (332)
T ss_dssp CSEEEECH
T ss_pred CCEEEECC
T ss_conf 76322376
No 235
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=24.50 E-value=32 Score=14.31 Aligned_cols=84 Identities=23% Similarity=0.165 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHHHHHCCEEEEECCCHHH-HHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEE-EECCCCCCHHHHHH
Q ss_conf 71248889998866528768852288999-98765021578822576289999999850597799-83677789999999
Q gi|254780669|r 99 GLKKGREIFRDLKKKYGFPILTDVHTEQQ-CEAIADSVDILQIPALLCRQTDLLTAAAQTGRVIN-VKKGQFLSPWEMHN 176 (301)
Q Consensus 99 Gle~gL~il~e~k~~~glpv~TeV~~~~~-~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~-iKkgq~~s~~e~~~ 176 (301)
|..+++..++-+ ++|++||+|=|-.|-- ...-+|.--+-+-.| ..|.+.++...|+. +==|...|---
T Consensus 145 gyrKA~R~m~~A-ekf~~Piit~IDTpGA~pg~~aEe~Gqa~aIA------~~l~~~~~l~vP~isvIiGEGgSGGA--- 214 (327)
T 2f9i_A 145 GYRKALRLMKQA-EKFNRPIFTFIDTKGAYPGKAAEERGQSESIA------TNLIEMASLKVPVIAIVIGEGGSGGA--- 214 (327)
T ss_dssp HHHHHHHHHHHH-HHTTCCEEEEEEESCSCCCHHHHHTTHHHHHH------HHHHHHHTCSSCEEEEEEEEEBHHHH---
T ss_pred HHHHHHHHHHHH-HHCCCCEEEEECCCCCCCCCCCCCCCHHHHHH------HHHHHHHCCCCCEEEEEECCCCCCCE---
T ss_conf 999999999999-97499779984279867887744148999999------99999858999979999757555311---
Q ss_pred HHHHHHHCCCCCEEEEECCC
Q ss_conf 99999725878089951465
Q gi|254780669|r 177 ILQKLHAHGAKDVLFCERGT 196 (301)
Q Consensus 177 a~eki~~~Gn~~i~lcERG~ 196 (301)
+.-...+.|+..|-++
T Consensus 215 ----lal~~ad~v~mle~a~ 230 (327)
T 2f9i_A 215 ----LGIGIANKVLMLENST 230 (327)
T ss_dssp ----HTTCCCSEEEEETTCB
T ss_pred ----EEEECCCEEEEECCEE
T ss_conf ----3453378488745718
No 236
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=24.42 E-value=33 Score=14.22 Aligned_cols=41 Identities=20% Similarity=0.401 Sum_probs=26.4
Q ss_pred CCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHH
Q ss_conf 587808995146544401000000010688-8518716871177
Q gi|254780669|r 184 HGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASH 226 (301)
Q Consensus 184 ~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SH 226 (301)
..|..++.+|-=+.... .+.|+..+..+ ++.+.|+++|-|-
T Consensus 138 ~~~tklI~~EspsNP~l--~v~Di~~i~~ia~~~g~~~vvDnT~ 179 (412)
T 2cb1_A 138 SAKTRAVFVETVANPAL--LVPDLEALATLAEEAGVALVVDNTF 179 (412)
T ss_dssp CTTEEEEEEESSCTTTC--CCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred HCCCEEEEEECCCCCCC--CCCCHHHHHHHHHHCCCCEEEECCC
T ss_conf 35963999984899886--5123999999998759978995451
No 237
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=24.19 E-value=34 Score=14.19 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=13.7
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 388999999999971898899983698
Q gi|254780669|r 241 ERQYIVPLAKAAVAIGIAGIFLETHQD 267 (301)
Q Consensus 241 ~r~~v~~la~aa~a~G~dGlfiE~Hp~ 267 (301)
-.+++.-+...+-..|.|-+-+=+--|
T Consensus 282 ~~~~~~Hi~~~~~l~G~dhVgiGsDfd 308 (364)
T 3ly0_A 282 WEPVLRHLDHLIDRLGEDHVGMGSDFD 308 (364)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEECCCBT
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 999999999999970988189843689
No 238
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=23.84 E-value=34 Score=14.15 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=24.6
Q ss_pred HCCCEEEEECCCC----C---CHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 0597799836777----8---999999999999725878089951465
Q gi|254780669|r 156 QTGRVINVKKGQF----L---SPWEMHNILQKLHAHGAKDVLFCERGT 196 (301)
Q Consensus 156 ~t~kpV~iKkgq~----~---s~~e~~~a~eki~~~Gn~~i~lcERG~ 196 (301)
...|||.+-=.|- . .+.....|+.-..+.....|.+|-.|.
T Consensus 127 ~~~kPVVlTGAmrp~~~~~sDg~~NL~~Av~~A~~~~~~gV~v~f~~~ 174 (358)
T 2him_A 127 NLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNR 174 (358)
T ss_dssp TCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHHHSCCSSEEEEETTE
T ss_pred CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 789856996888888776763377899999997325778279973477
No 239
>2vy9_A Anti-sigma-factor antagonist; gene regulation, RSBS, stressosome, STAS domain, bacillus subtilis; 2.3A {Moorella thermoacetica}
Probab=23.74 E-value=2.2 Score=21.98 Aligned_cols=25 Identities=8% Similarity=0.131 Sum_probs=12.6
Q ss_pred HHHHHHHHHCCCEEEEEECCCHHHC
Q ss_conf 9999999718988999836983347
Q gi|254780669|r 247 PLAKAAVAIGIAGIFLETHQDPDNA 271 (301)
Q Consensus 247 ~la~aa~a~G~dGlfiE~Hp~P~~A 271 (301)
.+.+..-..|..=.+..++|...+.
T Consensus 66 ~~~~~~~~~g~~~~l~g~~p~v~~~ 90 (123)
T 2vy9_A 66 EISRLAELLGLPFVLTGIKPAVAIT 90 (123)
T ss_dssp HHHHHHHHTTCCEEEECCCHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCHHHHHH
T ss_conf 9999999769989999389999999
No 240
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, structural genomics, NPPSFA; 1.60A {Pyrococcus horikoshii OT3} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=23.21 E-value=35 Score=14.07 Aligned_cols=90 Identities=21% Similarity=0.282 Sum_probs=57.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE--CCC-----HH
Q ss_conf 49999999999999996553399706601557688666322245671248889998866528768852--288-----99
Q gi|254780669|r 54 IESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTD--VHT-----EQ 126 (301)
Q Consensus 54 iES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~Te--V~~-----~~ 126 (301)
..+.+.++++++.+... -.++|. -+.... ..|++.+++++++++.+++-| .|| ..
T Consensus 8 ~~~~~~al~i~~~~~~~------i~~iKi------g~~l~~------~~G~~~i~~l~~~~~~~i~~D~K~~Dig~t~~~ 69 (208)
T 2czd_A 8 VYEGERAIKIAKSVKDY------ISMIKV------NWPLIL------GSGVDIIRRLKEETGVEIIADLKLADIPNTNRL 69 (208)
T ss_dssp CCSHHHHHHHHHHHGGG------CSEEEE------EHHHHH------HHCTTHHHHHHHHHCCEEEEEEEECSCHHHHHH
T ss_pred CCCHHHHHHHHHHHCCC------CEEEEE------CHHHHH------HCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHH
T ss_conf 99999999999983786------609998------899997------439899999986579829987520135750999
Q ss_pred HHHHHHH-HCCEEEECHHHCCCHHHHHHHHHCCCEEEE
Q ss_conf 9987650-215788225762899999998505977998
Q gi|254780669|r 127 QCEAIAD-SVDILQIPALLCRQTDLLTAAAQTGRVINV 163 (301)
Q Consensus 127 ~~e~~~~-~vDilQIgA~~~rqtdLl~a~a~t~kpV~i 163 (301)
+++.+.+ .+|++-+=+.. -.+.++++.+.++-..+
T Consensus 70 ~~~~~~~~gad~~Tvh~~~--g~~~i~~~~~~~~~~~~ 105 (208)
T 2czd_A 70 IARKVFGAGADYVIVHTFV--GRDSVMAVKELGEIIMV 105 (208)
T ss_dssp HHHHHHHTTCSEEEEESTT--CHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHCCCCEEEEECCC--CHHHHHHHHHHHCCEEE
T ss_conf 9999761699889974027--87899877543011146
No 241
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei}
Probab=23.18 E-value=35 Score=14.07 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=11.3
Q ss_pred HHHHHHHHHHC-CCEEEE
Q ss_conf 99999999718-988999
Q gi|254780669|r 246 VPLAKAAVAIG-IAGIFL 262 (301)
Q Consensus 246 ~~la~aa~a~G-~dGlfi 262 (301)
+..+..+++-| +|-+.+
T Consensus 298 ~e~ae~~l~~G~aDlV~~ 315 (361)
T 3gka_A 298 LDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHCCCCCCHHH
T ss_conf 999999998799756276
No 242
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics, NPPSFA; 2.52A {Thermus thermophilus HB8}
Probab=23.16 E-value=35 Score=14.06 Aligned_cols=181 Identities=17% Similarity=0.184 Sum_probs=77.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE--EC--CCHHHHH-
Q ss_conf 999999999999996553399-70660155768866632224567124888999886652876885--22--8899998-
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLNI-GLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT--DV--HTEQQCE- 129 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~~-~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T--eV--~~~~~~e- 129 (301)
+++.++.++..+...-..... +.+.= .+|- |.|-.. -...+..+=...|+.|.- |. .-+-.+.
T Consensus 41 t~~~v~~i~~a~~~~~~~~~~~~~VvI-G~D~--R~~s~~--------~a~~~~~~l~~~Gi~V~~~~~~g~~pTP~~~~ 109 (524)
T 2z0f_A 41 TEAHVLAIAQAIAELRPSFGATGPLFL-AKDT--HALSEP--------AWATALSVFAAHGIEVRVEADGDYTPTPLVSL 109 (524)
T ss_dssp CHHHHHHHHHHHHHHTTTTTCCSCEEE-EECS--CTTHHH--------HHHHHHHHHHHTTCCEEEESSSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEE-EECC--CCCHHH--------HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHH
T ss_conf 999999999999999996599973999-9799--706899--------99999999997799899938998237668999
Q ss_pred HHHH-------HCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH---HHCCCCCEEEE---E---
Q ss_conf 7650-------215788225762899999998505977998367778999999999999---72587808995---1---
Q gi|254780669|r 130 AIAD-------SVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKL---HAHGAKDVLFC---E--- 193 (301)
Q Consensus 130 ~~~~-------~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki---~~~Gn~~i~lc---E--- 193 (301)
.+.. +..-+.|-| +.|.. .--|--+.-..|..++++.-..+.+++ ...+...+--. +
T Consensus 110 av~~~~~~~~~~~~GImITA--SHNP~-----~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~ 182 (524)
T 2z0f_A 110 AILEHNAHHEAKADGVLLTP--SHNPP-----EDGGFKYNPPTGGPANARITRAIEERANALLQEGLKGVKRLPLREALA 182 (524)
T ss_dssp HHHHHHTTCSSCCEEEEECC----CCT-----TCEEEEEECTTSSCCCHHHHHHHHHHHHHHHHTTTTTCCCCCHHHHHH
T ss_pred HHHHHHCCCCCCCCEEEEEC--CCCCC-----CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99984101246671599954--78985-----448657624898736605789999999987653003466577311255
Q ss_pred CCCCCC----CHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 465444----0100000001068885187168711777421223453212638899999999997189889998369833
Q gi|254780669|r 194 RGTSFG----YNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPD 269 (301)
Q Consensus 194 RG~~fg----y~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P~ 269 (301)
+...+. |-..+...-.....+..++.|++||-|.+ -..+++.+.+ .+|++-..++..++|.
T Consensus 183 ~~~~~d~~~~Y~~~l~~~i~~~~~~~~~~kIvvD~~~G~------------~~~~~~~ll~---~lG~~v~~i~~~~d~~ 247 (524)
T 2z0f_A 183 RAKPFDYAGLYVEKVAEAVDLEAIRASGLRIGVDPLGGA------------SLRVWERLAE---SHGLPLEVVNPTLDPT 247 (524)
T ss_dssp HCEEECHHHHHHHHGGGTSCHHHHHHSCCCEEEECTTST------------THHHHHHHHH---HHTCCEEEC-------
T ss_pred CEEEECHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCC------------CHHHHHHHHH---HHCCCEEEECCCCCCC
T ss_conf 215611288899865401461001356877999679884------------1345677888---7288215756725787
No 243
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=22.88 E-value=36 Score=14.03 Aligned_cols=86 Identities=22% Similarity=0.271 Sum_probs=49.8
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC--------C--------------CCCCCCCCCCCCCCCCC
Q ss_conf 7069995486349999999999999996553399706601--------5--------------57688666322245671
Q gi|254780669|r 43 QRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKS--------S--------------FDKANRSSLAGKRGVGL 100 (301)
Q Consensus 43 ~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~--------s--------------fdKanRtS~~sfrG~Gl 100 (301)
.|+++|+||-+.=--+.+++.|+.+..--....=--+||. + .+....-|...|.
T Consensus 5 ~~vi~I~GpTasGKt~la~~lA~~~~~eIIsaDS~QvYr~l~IgTaKpt~~e~~~i~Hhlid~~~p~~~~sv~~f~---- 80 (323)
T 3crm_A 5 PPAIFLMGPTAAGKTDLAMALADALPCELISVDSALIYRGMDIGTAKPSRELLARYPHRLIDIRDPAESYSAAEFR---- 80 (323)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHSCEEEEEECTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHH----
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEHHHHCCCCCEEECCCCHHHHHCCCEEEECCCCCCCCEEHHHHH----
T ss_conf 9689998977116999999999987997995124877299966888999999918997344433877677099999----
Q ss_pred HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH
Q ss_conf 248889998866528768852288999987650
Q gi|254780669|r 101 KKGREIFRDLKKKYGFPILTDVHTEQQCEAIAD 133 (301)
Q Consensus 101 e~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~ 133 (301)
+.+.+.++++..+-.+||+.= -.--.++.+.+
T Consensus 81 ~~a~~~i~~i~~~gk~PIiVG-GTglYl~aLl~ 112 (323)
T 3crm_A 81 ADALAAMAKATARGRIPLLVG-GTMLYYKALLE 112 (323)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE-SCHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCEEEEC-CCHHHHHHHHC
T ss_conf 999999999983599408975-61399999983
No 244
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.81 E-value=36 Score=14.02 Aligned_cols=62 Identities=23% Similarity=0.380 Sum_probs=29.6
Q ss_pred CCHHHCCCCC-CCHHHHHHCCCEEECHHHHHHHCCCCCC--C-CCCCHHHHHHH----HHHHHHHCCCEEEEEEC
Q ss_conf 4010000000-1068885187168711777421223453--2-12638899999----99999718988999836
Q gi|254780669|r 199 GYNTLVTDMR-SIPIMTSMGVPVIFDASHSVQQPGIHGN--C-SGGERQYIVPL----AKAAVAIGIAGIFLETH 265 (301)
Q Consensus 199 gy~~lvvD~~-~i~~lk~~~~PVi~D~SHs~q~p~~~~~--~-~gG~r~~v~~l----a~aa~a~G~dGlfiE~H 265 (301)
|++..+.|.. .....++.++||++-|++. +.|. . .-...++-..+ ..|..++|=+.+|+|--
T Consensus 26 g~~~~~~~~~ea~~~a~~iG~Pv~vKaa~G-----GGG~Gm~iv~~~~el~~a~~~a~~eA~~~Fgd~~v~iEk~ 95 (108)
T 2cqy_A 26 GFDGVVKDAEEAVRIAREIGYPVMIKASAG-----GGGKGMRIAWDDEETRDGFRLSSQEAASSFGDDRLLIEKF 95 (108)
T ss_dssp CCCSCBSSHHHHHHHHHHHCSSEEEEETTS-----CCTTTCEEESSHHHHHHHHHHHHHHHHHHTSSCCEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEECCCC-----CCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 869888999999999987199749881456-----7544027868999999999998899997079997898870
No 245
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=22.65 E-value=36 Score=14.00 Aligned_cols=47 Identities=13% Similarity=0.060 Sum_probs=25.0
Q ss_pred HHHHHHHHCCCEEEEECCCC---------CCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 99999850597799836777---------899999999999972587808995146
Q gi|254780669|r 149 DLLTAAAQTGRVINVKKGQF---------LSPWEMHNILQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 149 dLl~a~a~t~kpV~iKkgq~---------~s~~e~~~a~eki~~~Gn~~i~lcERG 195 (301)
+.++.+.+.|-||+||=... -+.+|+..+.+...+....+-++.|+=
T Consensus 225 ea~~~A~~IGyPVivKps~ggGGrGm~iv~~~~el~~a~~~a~~~~~~~~vliEk~ 280 (554)
T 1w96_A 225 DGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKL 280 (554)
T ss_dssp HHHHHHHHHCSSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHHSTTCCEEEEEC
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 99999975698789972356887367997274776666788886268986799982
No 246
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=22.57 E-value=36 Score=13.99 Aligned_cols=47 Identities=15% Similarity=0.080 Sum_probs=28.8
Q ss_pred HHHHHHHHCCCEEEEECCCC---------CCHHHHHHHHHHH-----HHCCCCCEEEEECCC
Q ss_conf 99999850597799836777---------8999999999999-----725878089951465
Q gi|254780669|r 149 DLLTAAAQTGRVINVKKGQF---------LSPWEMHNILQKL-----HAHGAKDVLFCERGT 196 (301)
Q Consensus 149 dLl~a~a~t~kpV~iKkgq~---------~s~~e~~~a~eki-----~~~Gn~~i~lcERG~ 196 (301)
++++.+.+.|-||+||--.. -+.+|...+.++. .++|+.+|+ .|+=.
T Consensus 142 ea~~~a~~IGyPviIKas~ggGGrGmriV~~~~el~~a~~~a~~ea~~~f~~~~v~-iE~~i 202 (451)
T 2vpq_A 142 EAKKIAKKIGYPVIIKATAGGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLY-MEKFI 202 (451)
T ss_dssp HHHHHHHHHCSSEEEEETTCCTTCSEEEESSHHHHHHHHHHHHHHHHHHHSCCCEE-EEECC
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEE-EEEEC
T ss_conf 99999987399699998878998862687582456999999999998547998389-99735
No 247
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=22.47 E-value=36 Score=13.98 Aligned_cols=45 Identities=16% Similarity=0.041 Sum_probs=27.9
Q ss_pred EEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEE
Q ss_conf 885228899998765021578822576289999999850597799
Q gi|254780669|r 118 ILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVIN 162 (301)
Q Consensus 118 v~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~ 162 (301)
+..|+.+++.++.+..-+|++.+-...-.+..+++++.++|.++.
T Consensus 53 ~~~d~~d~~~l~~~l~~~DvVi~~~p~~~~~~ia~aa~~~g~~~~ 97 (118)
T 3ic5_A 53 KQVDAKDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp EECCTTCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEE
T ss_conf 112448999999998599899983783045999999999099979
No 248
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=22.32 E-value=37 Score=13.96 Aligned_cols=179 Identities=15% Similarity=0.097 Sum_probs=93.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCEEEEEC--CC-HHH
Q ss_conf 634999999999999999655339970660155768866632224567124888999886652-87688522--88-999
Q gi|254780669|r 52 CQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKY-GFPILTDV--HT-EQQ 127 (301)
Q Consensus 52 CsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~-glpv~TeV--~~-~~~ 127 (301)
|=+.+.++++++++.+...- .++|-.++- | +..|.++++++++.+ +.++.-|. ++ +..
T Consensus 7 lD~~~~~~~l~~~~~~~~~v------~~iKig~~l--------~----~~~G~~~i~~l~~~~~~~~i~~D~k~~di~~t 68 (207)
T 3ajx_A 7 IDLLSTEAALELAGKVAEYV------DIIELGTPL--------I----KAEGLSVITAVKKAHPDKIVFADMKTMDAGEL 68 (207)
T ss_dssp ECCSCHHHHHHHHHHHGGGC------SEEEECHHH--------H----HHHCTHHHHHHHHHSTTSEEEEEEEECSCHHH
T ss_pred ECCCCHHHHHHHHHHHCCCC------CEEEECHHH--------H----HHCCHHHHHHHHHHCCCCEEECCCCCCCCCHH
T ss_conf 17999999999999708867------899955499--------8----85599999999873799464011212159768
Q ss_pred H-HHHHH-HCCEEEECHHHCCCH--HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
Q ss_conf 9-87650-215788225762899--9999985059779983677789999999999997258780899514654440100
Q gi|254780669|r 128 C-EAIAD-SVDILQIPALLCRQT--DLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTL 203 (301)
Q Consensus 128 ~-e~~~~-~vDilQIgA~~~rqt--dLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~l 203 (301)
. +.+.+ .+|++=+-++....+ ..++++.+.+..+.+--....++. ..++.+...|. +.+.+++|.......
T Consensus 69 ~~~~~~~~gad~itvH~~~g~~~l~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~- 143 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKA---TRAQEVRALGA-KFVEMHAGLDEQAKP- 143 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHH---HHHHHHHHTTC-SEEEEECCHHHHTST-
T ss_pred HHHHHHHHCCCEEEEEHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCHH---HHHHHHHHHCC-CEEEEECCCCCCCCC-
T ss_conf 9999998199999985542445699999999972983799935899979---99999997239-799980355545456-
Q ss_pred CCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE----CCCHHHC
Q ss_conf 000001068885-1871687117774212234532126388999999999971898899983----6983347
Q gi|254780669|r 204 VTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET----HQDPDNA 271 (301)
Q Consensus 204 vvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~----Hp~P~~A 271 (301)
..++..+..+++ ...++..|+ |.|.. -...++.+|+|.+.+-. ..||.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~g---------------Gi~~~---~~~~a~~~GaD~iVvGr~I~~a~dP~~~ 198 (207)
T 3ajx_A 144 GFDLNGLLAAGEKARVPFSVAG---------------GVKVA---TIPAVQKAGAEVAVAGGAIYGAADPAAA 198 (207)
T ss_dssp TCCTHHHHHHHHHHTSCEEEES---------------SCCGG---GHHHHHHTTCSEEEESHHHHTSSSHHHH
T ss_pred CCHHHHHHHHHHCCCCCEEECC---------------CCCCC---CHHHHHHCCCCEEEECHHHCCCCCHHHH
T ss_conf 3138899999860377677897---------------98815---8999998597999986466189999999
No 249
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=22.13 E-value=37 Score=13.93 Aligned_cols=53 Identities=13% Similarity=0.044 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHCCEEEE--ECCCHHHHHHH-HH-HCCEEEECHHHCCCHHHHHHHH
Q ss_conf 888999886652876885--22889999876-50-2157882257628999999985
Q gi|254780669|r 103 GREIFRDLKKKYGFPILT--DVHTEQQCEAI-AD-SVDILQIPALLCRQTDLLTAAA 155 (301)
Q Consensus 103 gL~il~e~k~~~glpv~T--eV~~~~~~e~~-~~-~vDilQIgA~~~rqtdLl~a~a 155 (301)
-+.+.+.+|+..++||+. -++++++++.+ .+ .+|++-+|--+..+.||...+.
T Consensus 279 ~~~~~~~i~~~~~~pvi~~g~~~~~~~a~~~l~~g~~D~v~~gR~~iadP~~~~k~~ 335 (729)
T 1o94_A 279 TIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVE 335 (729)
T ss_dssp THHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHH
T ss_conf 524899987642887204688689999999998799870112479772942777865
No 250
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=21.90 E-value=37 Score=13.90 Aligned_cols=122 Identities=16% Similarity=0.123 Sum_probs=62.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHH-HHHHHHC-----CEEEECHHHCCCHHHHHHHHHCC-CEEEEEC-
Q ss_conf 22456712488899988665287688522889999-8765021-----57882257628999999985059-7799836-
Q gi|254780669|r 94 GKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQC-EAIADSV-----DILQIPALLCRQTDLLTAAAQTG-RVINVKK- 165 (301)
Q Consensus 94 sfrG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~-e~~~~~v-----DilQIgA~~~rqtdLl~a~a~t~-kpV~iKk- 165 (301)
.+.+.| ....+.=+++++-+|.+-..=|..-..+ ..+.... |-+=+|++.|--| ..++-..| +||.+-=
T Consensus 36 ~~~~~g-~~~~~fE~~~a~~~g~k~ai~~~sgT~Al~lal~~l~~~~gdeVi~p~~t~~a~--~~~i~~~g~~pv~~Di~ 112 (418)
T 2c81_A 36 YWTGEE-SMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIAT--ATAVLNVNALPVFVDVE 112 (418)
T ss_dssp BCCSSC-CHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECBC
T ss_pred CCCCCC-HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHH--HHHHHHCCCEEEEECCC
T ss_conf 405898-699999999999978595999778799999999984989719999899750999--99999839987773145
Q ss_pred --CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHH
Q ss_conf --777899999999999972587808995146544401000000010688-851871687117774
Q gi|254780669|r 166 --GQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSV 228 (301)
Q Consensus 166 --gq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~ 228 (301)
...+++++ ++..-.++.-+.-=-..+|+. .|+..+..+ ++.++|||.|++||.
T Consensus 113 ~~~~~~~~~~-------~~~~~~~~t~ai~~vh~~G~~---~d~~~I~~ia~~~~i~vIeD~a~a~ 168 (418)
T 2c81_A 113 ADTYCIDPQL-------IKSAITDKTKAIIPVHLFGSM---ANMDEINEIAQEHNLFVIEDCAQSH 168 (418)
T ss_dssp TTTCSBCHHH-------HGGGCCTTEEEECCBCCTTCC---CCHHHHHHHHHHTTCEEEEECTTCT
T ss_pred CCCCCCCHHH-------HHHHHCCCCCEEEEECCCCCC---CCHHHHHHHHHHCCCEEEECCCHHH
T ss_conf 6411134588-------999734676226753047751---5799999999984988997375441
No 251
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus HB8} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=21.83 E-value=37 Score=13.89 Aligned_cols=191 Identities=17% Similarity=0.195 Sum_probs=102.3
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCC-----CCCCCCC-CCCCCHHHHHHHHHHHHHHCCEE
Q ss_conf 999548634999999999999999655339-9706601557688-----6663222-45671248889998866528768
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKAN-----RSSLAGK-RGVGLKKGREIFRDLKKKYGFPI 118 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKan-----RtS~~sf-rG~Gle~gL~il~e~k~~~glpv 118 (301)
.+.|| -=+.+...++.+.+.+ |+++. +|.=| |-+.|- +++..+. .|..+++-++++++++++.+.|+
T Consensus 21 YltaG---~P~~~~~~~~l~~l~~-gaDiiEiGiPf--SDP~aDGpvIq~A~~~AL~~G~~~~~~~~~~~~~r~~~~~p~ 94 (271)
T 1ujp_A 21 YLTAG---FPSREGFLQAVEEVLP-YADLLEIGLPY--SDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPL 94 (271)
T ss_dssp EEETT---SSCHHHHHHHHHHHGG-GCSSEEEECCC--CC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCE
T ss_pred EEECC---CCCHHHHHHHHHHHHC-CCCEEEECCCC--CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCE
T ss_conf 98270---8987899999999766-99989968998--886655699999998888679966889999999862379755
Q ss_pred EE--ECCC------HHHHHHHHH-HCCEEEECHHHCC-CHHHHHHHHHCCC-EEEEECCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 85--2288------999987650-2157882257628-9999999850597-7998367778999999999999725878
Q gi|254780669|r 119 LT--DVHT------EQQCEAIAD-SVDILQIPALLCR-QTDLLTAAAQTGR-VINVKKGQFLSPWEMHNILQKLHAHGAK 187 (301)
Q Consensus 119 ~T--eV~~------~~~~e~~~~-~vDilQIgA~~~r-qtdLl~a~a~t~k-pV~iKkgq~~s~~e~~~a~eki~~~Gn~ 187 (301)
+- =... .+-++.+++ .+|-+=||---.. ..++..++.+.+. +|.+=-+ .++++ -.+++.+....
T Consensus 95 vlM~Y~N~~~~~G~~~F~~~~~~aGvdG~iipDLP~ee~~~~~~~~~~~gl~~I~lvaP--tt~~~---Ri~~i~~~s~g 169 (271)
T 1ujp_A 95 FLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAP--TSTDA---RIATVVRHATG 169 (271)
T ss_dssp EEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECT--TCCHH---HHHHHHTTCCS
T ss_pred EEEEECCHHHHCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECC--CCCHH---HHHHHHHHCCC
T ss_conf 99984442441673788899987398423247785221378999998569867999478--88578---99999973987
Q ss_pred CEEE-EECCCCCCCHHHCCCCC-CCHHHHHH-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 0899-51465444010000000-10688851-871687117774212234532126388999999999971898899983
Q gi|254780669|r 188 DVLF-CERGTSFGYNTLVTDMR-SIPIMTSM-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLET 264 (301)
Q Consensus 188 ~i~l-cERG~~fgy~~lvvD~~-~i~~lk~~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~ 264 (301)
=|.+ .-.|+|-....+-.++. .+..+|+. ..||++---.+ .++-+. ...++||+.+=+
T Consensus 170 FiY~vs~~GvTG~~~~~~~~~~~~i~~ik~~t~~Pv~vGFGI~-------------t~e~~~------~~~~ADGvIVGS 230 (271)
T 1ujp_A 170 FVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVS-------------GKATAA------QAAVADGVVVGS 230 (271)
T ss_dssp CEEEECC------------CCHHHHHHHHTTCCSCEEEESCCC-------------SHHHHH------HHTTSSEEEECH
T ss_pred EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCC-------------CHHHHH------HHCCCCEEEECH
T ss_conf 0788403677776655523589999875105689759980779-------------889998------746899899859
Q ss_pred CC
Q ss_conf 69
Q gi|254780669|r 265 HQ 266 (301)
Q Consensus 265 Hp 266 (301)
+-
T Consensus 231 a~ 232 (271)
T 1ujp_A 231 AL 232 (271)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 252
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA; 2.00A {Aquifex aeolicus VF5}
Probab=21.82 E-value=37 Score=13.89 Aligned_cols=212 Identities=15% Similarity=0.206 Sum_probs=106.1
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCC-----CCCCCCC-CCCCCHHHHHHHHHHHHH-HCCE
Q ss_conf 999548634999999999999999655339-9706601557688-----6663222-456712488899988665-2876
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKAN-----RSSLAGK-RGVGLKKGREIFRDLKKK-YGFP 117 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKan-----RtS~~sf-rG~Gle~gL~il~e~k~~-~glp 117 (301)
.+.+|= -+.+...++++.+.+.|.++. +|.=|- -+.|- +++..+. .|..+++.++++++++++ ..+|
T Consensus 22 y~t~G~---P~~~~~~~~~~~l~~~G~d~iElGiPfS--DP~aDGpvIq~a~~~al~~G~~~~~~~~~~~~~r~~~~~~p 96 (262)
T 2ekc_A 22 YLMVGY---PDYETSLKAFKEVLKNGTDILEIGFPFS--DPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIP 96 (262)
T ss_dssp EEETTS---SCHHHHHHHHHHHHHTTCSEEEEECCCS--CCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred EEECCC---CCHHHHHHHHHHHHHCCCCEEEECCCCC--CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 882837---9868999999999976999999789999--86544899999999999789977776654333102378878
Q ss_pred EEEECC--------CHHHHHHHHH-HCCEEEECHHHCCC-HHHHHHHHHCCC-EEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 885228--------8999987650-21578822576289-999999850597-799836777899999999999972587
Q gi|254780669|r 118 ILTDVH--------TEQQCEAIAD-SVDILQIPALLCRQ-TDLLTAAAQTGR-VINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 118 v~TeV~--------~~~~~e~~~~-~vDilQIgA~~~rq-tdLl~a~a~t~k-pV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
++-=-- ....+..+++ .+|-+=||-.--.. .++..++.+.+. +|.+=-+ -.+.+.+ +.+.+...
T Consensus 97 ivlm~Y~N~i~~~G~~~f~~~~~~~Gv~gviipDlp~ee~~~~~~~~~~~gl~~I~lvsp-~t~~~ri----~~i~~~s~ 171 (262)
T 2ekc_A 97 FLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAP-TSTRKRI----KLICEAAD 171 (262)
T ss_dssp EEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECT-TCCHHHH----HHHHHHCS
T ss_pred EEEEECCCHHHHCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC-CCHHHHH----HHHHHCCC
T ss_conf 899950434400678999999997697578615886676677776752055446763588-8868888----88875156
Q ss_pred CCEEEE-ECCCCCCCHH-HC-CCC-CCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 808995-1465444010-00-000-01068885-1871687117774212234532126388999999999971898899
Q gi|254780669|r 187 KDVLFC-ERGTSFGYNT-LV-TDM-RSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIF 261 (301)
Q Consensus 187 ~~i~lc-ERG~~fgy~~-lv-vD~-~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlf 261 (301)
.=+.+. ..|+| |.++ +- .++ ..+..+|+ +..||++---=+ .++-+ + .+..++||+.
T Consensus 172 gfiY~vs~~GvT-G~~~~~~~~~~~~~i~~ik~~t~~Pv~vGFGI~-------------~~e~v----~-~~~~~ADgvV 232 (262)
T 2ekc_A 172 EMTYFVSVTGTT-GAREKLPYERIKKKVEEYRELCDKPVVVGFGVS-------------KKEHA----R-EIGSFADGVV 232 (262)
T ss_dssp SCEEEESSCC----------CHHHHHHHHHHHHHCCSCEEEESSCC-------------SHHHH----H-HHHTTSSEEE
T ss_pred CEEEEEECCCCC-CCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCC-------------CHHHH----H-HHHHCCCEEE
T ss_conf 426772135636-756656502578999998512688758862659-------------99999----9-9982199999
Q ss_pred EEECCCHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9836983347978201868899999999999
Q gi|254780669|r 262 LETHQDPDNAPSDGPNMINIKDLPKLLSQLL 292 (301)
Q Consensus 262 iE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~ 292 (301)
+=++-= +.+.+ =..+.+.+++++++
T Consensus 233 VGSaiv--k~i~~----~~~~~~~~~i~~lk 257 (262)
T 2ekc_A 233 VGSALV--KLAGQ----KKIEDLGNLVKELK 257 (262)
T ss_dssp ECHHHH--HHHHT----TCHHHHHHHHHHHH
T ss_pred ECHHHH--HHHHH----CCHHHHHHHHHHHH
T ss_conf 878999--99875----67999999999999
No 253
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, joint center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} PDB: 3kgx_A 1h0c_A* 1j04_A*
Probab=21.55 E-value=38 Score=13.86 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=56.0
Q ss_pred HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHH
Q ss_conf 02157882257628999999985059779983677789999999999997258780899514654440100000001068
Q gi|254780669|r 133 DSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPI 212 (301)
Q Consensus 133 ~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~ 212 (301)
+.+.+...+.+-.+-.++....+.....+....+....+.+.. +........-|.+++=-++.|..+ |+..+..
T Consensus 99 ~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~t~tG~~~---pi~~i~~ 172 (393)
T 3kgw_A 99 DSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVE---EGLAQHKPVLLFLVHGESSTGVVQ---PLDGFGE 172 (393)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHH---HHHHHHCCSEEEEESEETTTTEEC---CCTTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHH---HHHHCCCCEEEEEEEEECCCCCCC---CHHHHHH
T ss_conf 8125512663899999999985896311047988877989999---987459970899972203554558---8999999
Q ss_pred H-HHHCCCEEECHHHHH
Q ss_conf 8-851871687117774
Q gi|254780669|r 213 M-TSMGVPVIFDASHSV 228 (301)
Q Consensus 213 l-k~~~~PVi~D~SHs~ 228 (301)
+ ++.+..+++|++||.
T Consensus 173 ~~~~~g~~~~vDa~~s~ 189 (393)
T 3kgw_A 173 LCHRYQCLLLVDSVASL 189 (393)
T ss_dssp HHHHTTCEEEEECTTTT
T ss_pred HHHHCCCCEEEEECCCC
T ss_conf 99873990799701444
No 254
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=21.51 E-value=38 Score=13.85 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=58.2
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 69995486349999999999999996553399706601557688666322245671248889998866528768852288
Q gi|254780669|r 45 FVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVHT 124 (301)
Q Consensus 45 l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~~ 124 (301)
|-+|.||=-----..+++.+..++..+.+ -.+|||+.|. |.+.+ .--..|.. + +-+ .+..
T Consensus 22 L~li~GpMfSGKTteLi~~~~~~~~~~kk---vlvikp~~D~--Ry~~~----i~sh~g~~--------~--~a~-~~~~ 81 (195)
T 1w4r_A 22 IQVILGPMFSGKSTELMRRVRRFQIAQYK---CLVIKYAKDT--RYSSS----FCTHDRNT--------M--EAL-PACL 81 (195)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCC---EEEEEETTCC--CGGGS----CCHHHHHH--------S--EEE-EESS
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCC---EEEEEECCCC--CCCCC----CEEECCCE--------E--EEE-EECC
T ss_conf 99999251768999999999999987990---9999866665--56874----43204861--------6--788-8566
Q ss_pred HHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 99998765021578822576289999999850597799836777899999999999972587808995
Q gi|254780669|r 125 EQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFC 192 (301)
Q Consensus 125 ~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lc 192 (301)
. .+++.... .--.|.|--+||.. +....++.+...| ..|+++
T Consensus 82 ~----------------------~~~~~~~~-~~d~I~IDEaQFf~--di~~~v~~l~~~~-~~Viv~ 123 (195)
T 1w4r_A 82 L----------------------RDVAQEAL-GVAVIGIDEGQFFP--DIVEFCEAMANAG-KTVIVA 123 (195)
T ss_dssp G----------------------GGGHHHHH-TCSEEEESSGGGCT--THHHHHHHHHHTT-CEEEEE
T ss_pred H----------------------HHHHHHHC-CCCEEEEEHHHHHH--HHHHHHHHHHHCC-CEEEEE
T ss_conf 9----------------------99986415-68799996245658--7999999998269-718999
No 255
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3lb0_A* 3l2i_A* 3nnt_A* 3m7w_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=21.42 E-value=38 Score=13.84 Aligned_cols=225 Identities=14% Similarity=0.110 Sum_probs=136.9
Q ss_pred CCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC-CCHHH
Q ss_conf 77068357877279769970699954863499999999999999965533997066015576886663222456-71248
Q gi|254780669|r 25 NAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGV-GLKKG 103 (301)
Q Consensus 25 ~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~-Gle~g 103 (301)
.+.++|+ ++.+|.+.|- |.-|-+-.+.+.+++-|+.+++.+.++. =|+- +.|.+. -.++-
T Consensus 25 m~~v~v~----~~~~g~g~Pk--IcVpi~~~t~~e~l~~a~~~~~~~aDlv---E~Rl----------D~l~~~~~~~~~ 85 (276)
T 3o1n_A 25 MKTVTVR----DLVVGEGAPK--IIVSLMGKTITDVKSEALAYREADFDIL---EWRV----------DHFANVTTAESV 85 (276)
T ss_dssp CCCEEET----TEEETSSSCE--EEEEECCSSHHHHHHHHHHHTTSCCSEE---EEEG----------GGCTTTTCHHHH
T ss_pred CCEEEEC----CEEECCCCCE--EEEEECCCCHHHHHHHHHHHHCCCCCEE---EEEE----------CCCCCCCCHHHH
T ss_conf 7169985----7897599968--9999688999999999998601799989---9976----------235777988999
Q ss_pred HHHHHHHHHHH-CCEEEEECCCH-----------HHHHHH---H--HHCCEEEECHHHCCC--HHHHHHHHHCCCEEEEE
Q ss_conf 88999886652-87688522889-----------999876---5--021578822576289--99999985059779983
Q gi|254780669|r 104 REIFRDLKKKY-GFPILTDVHTE-----------QQCEAI---A--DSVDILQIPALLCRQ--TDLLTAAAQTGRVINVK 164 (301)
Q Consensus 104 L~il~e~k~~~-glpv~TeV~~~-----------~~~e~~---~--~~vDilQIgA~~~rq--tdLl~a~a~t~kpV~iK 164 (301)
++.+..+++.+ ++|++--+... +.++.+ . ..+|.+-|=.+.-+. .+++..+.+.+..|.+=
T Consensus 86 ~~~~~~lr~~~~~~PiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~IDIEl~~~~~~~~~l~~~a~~~~~~vI~S 165 (276)
T 3o1n_A 86 LEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMS 165 (276)
T ss_dssp HHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 99999999735899789997975669998899999999999999808997796431261889999999875259679998
Q ss_pred CCCC---CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHH--CCCEEECHHHHHHHCCCCCCCCC
Q ss_conf 6777---899999999999972587808995146544401000000010688851--87168711777421223453212
Q gi|254780669|r 165 KGQF---LSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSM--GVPVIFDASHSVQQPGIHGNCSG 239 (301)
Q Consensus 165 kgq~---~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~--~~PVi~D~SHs~q~p~~~~~~~g 239 (301)
.+-| .+.+++....+++.+.|.+=+-++=.-.+ +.+...-+.....+++. ..|+|.=+-= ..
T Consensus 166 ~HdF~~tP~~~el~~~~~~m~~~gaDivKiA~~~~~--~~D~l~ll~~~~~~~~~~~~~PlI~~~MG-----------~~ 232 (276)
T 3o1n_A 166 NHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQT--KADVLTLLTATVEMQERYADRPIITMSMS-----------KT 232 (276)
T ss_dssp EEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSS--HHHHHHHHHHHHHHHHHTCCSCCEEEECS-----------GG
T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC--HHHHHHHHHHHHHHHHHCCCCCEEEEECC-----------CC
T ss_conf 614889989999999999998628998999980699--88999999999999961789988999789-----------88
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 63889999999999718988999836983347978201868899999999999
Q gi|254780669|r 240 GERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIKDLPKLLSQLL 292 (301)
Q Consensus 240 G~r~~v~~la~aa~a~G~dGlfiE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~ 292 (301)
|+-.=+ ++-.+|-.--|.=. +. .-+|-|++.+++..+++-|-
T Consensus 233 G~~SRi-----~~~~~GS~~Tfa~l-~~-----~sAPGQi~v~~l~~il~~L~ 274 (276)
T 3o1n_A 233 GVISRL-----AGEVFGSAATFGAV-KK-----ASAPGAISVADLRTVLTILH 274 (276)
T ss_dssp GTHHHH-----CHHHHTCCEEECBS-SC-----CSSTTCCBHHHHHHHHHHHH
T ss_pred CHHHHH-----HHHHHCCCEEECCC-CC-----CCCCCCCCHHHHHHHHHHHC
T ss_conf 779999-----79986982583578-99-----98999867999999999855
No 256
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=21.40 E-value=38 Score=13.84 Aligned_cols=118 Identities=8% Similarity=0.030 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCHHHHHH-HHH-----HCCEEEECHHHCCCHHHHHHHHHCC-CEEEEE--CCCCCCHH
Q ss_conf 48889998866528768852288999987-650-----2157882257628999999985059-779983--67778999
Q gi|254780669|r 102 KGREIFRDLKKKYGFPILTDVHTEQQCEA-IAD-----SVDILQIPALLCRQTDLLTAAAQTG-RVINVK--KGQFLSPW 172 (301)
Q Consensus 102 ~gL~il~e~k~~~glpv~TeV~~~~~~e~-~~~-----~vDilQIgA~~~rqtdLl~a~a~t~-kpV~iK--kgq~~s~~ 172 (301)
...+.=+++++.+|.+-.-=|..-..+-. +.. -=|-+-+|++.|--+- .++...| +||.+- ...+....
T Consensus 33 ~v~~fE~~~~~~~~~~~av~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~~~~--~~~~~~g~~~v~~d~~~~~~~~~~ 110 (394)
T 1o69_A 33 FVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASV--APICYLKAKPVFIDCDETYNIDVD 110 (394)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGT--HHHHHTTCEEEEECBCTTSSBCHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEC--HHHHHCCEEEEEECCCCCCCCCHH
T ss_conf 999999999999784949997887999999999869888699993898601021--236526618987336665232357
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHH
Q ss_conf 99999999972587808995146544401000000010688-851871687117774
Q gi|254780669|r 173 EMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSV 228 (301)
Q Consensus 173 e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~ 228 (301)
+.....+ ....+...++..-. ||+. .|+..+..+ ++.++|||-|++||.
T Consensus 111 ~~~~~~~--~~~~~~~~ii~~~~--~G~~---~d~~~i~~~~~~~~i~lIED~A~a~ 160 (394)
T 1o69_A 111 LLKLAIK--ECEKKPKALILTHL--YGNA---AKMDEIVEICKENDIVLIEDAAEAL 160 (394)
T ss_dssp HHHHHHH--HCSSCCCEEEEECG--GGCC---CCHHHHHHHHHHTTCEEEEECTTCT
T ss_pred HHHHHHH--CCCCCCEEEEEECC--CCCC---HHHHHHHHHHHHCCCEEEECCHHHH
T ss_conf 7999985--03568569998247--8885---1689999999975986884130432
No 257
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural genomics, NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=21.38 E-value=38 Score=13.83 Aligned_cols=94 Identities=18% Similarity=0.218 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHCCEEEEECCCHHHHH---HHHHHCCEEEECHHH-CCCHHHHHHHHHC--CCEEEEECCCCCCHHHH
Q ss_conf 24888999886652876885228899998---765021578822576-2899999998505--97799836777899999
Q gi|254780669|r 101 KKGREIFRDLKKKYGFPILTDVHTEQQCE---AIADSVDILQIPALL-CRQTDLLTAAAQT--GRVINVKKGQFLSPWEM 174 (301)
Q Consensus 101 e~gL~il~e~k~~~glpv~TeV~~~~~~e---~~~~~vDilQIgA~~-~rqtdLl~a~a~t--~kpV~iKkgq~~s~~e~ 174 (301)
++=.+++.++-++|.+--+-|=.+.++.+ .+.+-.++.=||-.+ +.|.+.|+..-+. --.|+||=.|..|+.|.
T Consensus 270 ~e~i~~y~~li~~yPI~sIEDp~~e~D~~gw~~lt~~l~~~ivGDDl~~Tn~~rl~~gi~~~~~nailiK~NQiGTvtet 349 (427)
T 2pa6_A 270 EELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLLKVNQIGTLSEA 349 (427)
T ss_dssp HHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHH
T ss_pred HHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEEECHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCHHHH
T ss_conf 99999999999869988996898756599999999863938977054057689999876516775305325442009999
Q ss_pred HHHHHHHHHCCCCCEEEEECC
Q ss_conf 999999972587808995146
Q gi|254780669|r 175 HNILQKLHAHGAKDVLFCERG 195 (301)
Q Consensus 175 ~~a~eki~~~Gn~~i~lcERG 195 (301)
+.+++...+.|- .+++.+|=
T Consensus 350 ~ea~~la~~~g~-~~ivShRS 369 (427)
T 2pa6_A 350 VDAAQLAFRNGY-GVVVSHRS 369 (427)
T ss_dssp HHHHHHHHTTTC-EEEEECCS
T ss_pred HHHHHHHHHCCC-EEEEECCC
T ss_conf 999999998799-89995788
No 258
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytoplasmid or periplasmic), drug target functions, structural genomics; 1.40A {Yersinia pestis} PDB: 1igw_A
Probab=21.24 E-value=38 Score=13.81 Aligned_cols=23 Identities=17% Similarity=0.144 Sum_probs=10.5
Q ss_pred EECCCHHHHHHHHHH-CCEEEECH
Q ss_conf 522889999876502-15788225
Q gi|254780669|r 120 TDVHTEQQCEAIADS-VDILQIPA 142 (301)
Q Consensus 120 TeV~~~~~~e~~~~~-vDilQIgA 142 (301)
--++++-|+-.+.++ .+.+.+.-
T Consensus 70 ~Ga~d~~~A~~~~kaGf~aiYlSG 93 (435)
T 3lg3_A 70 LGALTGGQALQQAKAGVEAIYMSG 93 (435)
T ss_dssp EBCCSHHHHHHHHHHTCCSEEECH
T ss_pred CCCCCHHHHHHHHHHCCCEEEECC
T ss_conf 675688999999983997798533
No 259
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=21.11 E-value=20 Score=15.62 Aligned_cols=42 Identities=12% Similarity=0.126 Sum_probs=16.9
Q ss_pred CCEEECCCCCEEEE-ECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 72797699706999-5486349999999999999996553399706601
Q gi|254780669|r 35 NQVTFSNEQRFVLI-AGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKS 82 (301)
Q Consensus 35 ~~i~ig~~~~l~iI-AGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~ 82 (301)
|-.-|.+++. +|| +|. ....-.+-+.+.+....-.+.+++=.
T Consensus 44 N~YlI~~d~~-vLIDtG~-----~~~~~~~l~~~~~~~~~~~I~~IilT 86 (262)
T 3hnn_A 44 NSYVIEGDKT-AIIDPPV-----ESFMKIYLEALQQTVNLKKLDYVILG 86 (262)
T ss_dssp EEEEEESSSE-EEECCCC-----HHHHHHHHHHHHHHSCGGGEEEEECS
T ss_pred EEEEEECCCE-EEEECCC-----HHHHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf 9999932999-9991897-----55799999999963784258899959
No 260
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=21.11 E-value=39 Score=13.80 Aligned_cols=184 Identities=15% Similarity=0.099 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC-----CHHHHH
Q ss_conf 99999999999999655339-970660155768866632224567124888999886652876885228-----899998
Q gi|254780669|r 56 SHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILTDVH-----TEQQCE 129 (301)
Q Consensus 56 S~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~TeV~-----~~~~~e 129 (301)
|.|+..++++.|.++|.+.. +| |.. ....+..+..+.--++-++.++.... ..+.+.-+-. +..++.
T Consensus 22 ~~e~k~~i~~~L~~~Gvd~IEvG--f~~----~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 3dxi_A 22 NSKIVDAYILAMNELPIDYLEVG--YRN----KPSKEYMGKFGYTPVSVLKHLRNIST-KKIAIMLNEKNTTPEDLNHLL 94 (320)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEE--ECC----SCCSSCCCHHHHCCHHHHHHHHHHCC-SEEEEEEEGGGCCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEC--CCC----CCHHHHHHHHCCCCHHHHHHHHHHHH-HHHHHHHHHHCCCHHHHHHEE
T ss_conf 99999999999997597989974--888----97546678761792899999986421-167887520001004355503
Q ss_pred -HHHHHCCEEEECHHHCCCH----HHHHHHHHCCCEEEEECCCC--CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
Q ss_conf -7650215788225762899----99999850597799836777--8999999999999725878089951465444010
Q gi|254780669|r 130 -AIADSVDILQIPALLCRQT----DLLTAAAQTGRVINVKKGQF--LSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNT 202 (301)
Q Consensus 130 -~~~~~vDilQIgA~~~rqt----dLl~a~a~t~kpV~iKkgq~--~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~ 202 (301)
.....+|.+++-. ...+- ++++.+.+.|..|.+-=-+. .+.++....+.+....|.+.|.+|.- +|+-+
T Consensus 95 ~~~~~~~~~ir~~~-~~~~i~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~d~i~l~DT---~G~~~ 170 (320)
T 3dxi_A 95 LPIIGLVDMIRIAI-DPQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMNGFLSKLKAIDKIADLFCMVDS---FGGIT 170 (320)
T ss_dssp GGGTTTCSEEEEEE-CGGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGSTTSGGGGGGGTTTCSEEEEECT---TSCCC
T ss_pred CCCCCCEEEEEECC-CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCC---CCCCC
T ss_conf 05336753465313-056799999999999974987988532021100278999999999717999984685---45517
Q ss_pred HCCCC-CCCHHHHHH-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 00000-010688851-871687117774212234532126388999999999971898899983698
Q gi|254780669|r 203 LVTDM-RSIPIMTSM-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQD 267 (301)
Q Consensus 203 lvvD~-~~i~~lk~~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~ 267 (301)
- -++ +-+..+|+. ..|+=+- +| -++-+...-+.+|+.+|++- +++=-.
T Consensus 171 P-~~v~~li~~~~~~~~i~i~~H-~H-------------n~~Gla~aN~laAl~~G~~~--iD~si~ 220 (320)
T 3dxi_A 171 P-KEVKNLLKEVRKYTHVPVGFH-GH-------------DNLQLGLINSITAIDDGIDF--IDATIT 220 (320)
T ss_dssp H-HHHHHHHHHHHHHCCSCEEEE-CB-------------CTTSCHHHHHHHHHHTTCSE--EEEBGG
T ss_pred H-HHHHHHHHHHHCCCCEEEEEE-EC-------------CCCCHHHHHHHHHHHHCCCE--EEECCC
T ss_conf 1-659999999874877059999-64-------------85256999999999849988--995776
No 261
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A*
Probab=20.65 E-value=40 Score=13.74 Aligned_cols=159 Identities=9% Similarity=0.082 Sum_probs=85.7
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE
Q ss_conf 99706999548634999999999999999655339970660155768866632224567124888999886652876885
Q gi|254780669|r 41 NEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKKYGFPILT 120 (301)
Q Consensus 41 ~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~~glpv~T 120 (301)
...+.+++.||..+=--..+-++|..+..... ..-.+- +.+.||--+ .+-|+...+..|+|+..
T Consensus 103 ~~~~vI~lvGptGvGKTTtiaKLAa~~~~~~~--~~v~li----------t~Dt~R~~A----~eQLk~~a~~l~vp~~~ 166 (296)
T 2px0_A 103 IHSKYIVLFGSTGAGKTTTLAKLAAISMLEKH--KKIAFI----------TTDTYRIAA----VEQLKTYAELLQAPLEV 166 (296)
T ss_dssp CCSSEEEEEESTTSSHHHHHHHHHHHHHHTTC--CCEEEE----------ECCCSSTTH----HHHHHHHHTTTTCCCCB
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCC--CCEEEE----------ECCCCCHHH----HHHHHHHHHHCCCCCCE
T ss_conf 78888999899998889999999999999579--906999----------807997689----99999999741798504
Q ss_pred ECCCHHHHHHHH---HHCC--EEEECHHHCCCHHHHHHHHHCCC---E--EEEECCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf 228899998765---0215--78822576289999999850597---7--998367778999999999999725878089
Q gi|254780669|r 121 DVHTEQQCEAIA---DSVD--ILQIPALLCRQTDLLTAAAQTGR---V--INVKKGQFLSPWEMHNILQKLHAHGAKDVL 190 (301)
Q Consensus 121 eV~~~~~~e~~~---~~vD--ilQIgA~~~rqtdLl~a~a~t~k---p--V~iKkgq~~s~~e~~~a~eki~~~Gn~~i~ 190 (301)
+.++.....+. +..| ++-.+.|+-++.+++.++.+.-. | +.+==.-....+++..+++.....+-..++
T Consensus 167 -~~~~~~l~~a~~~~~~~d~vlIDTaGr~~~~~~~~~eL~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~li 245 (296)
T 2px0_A 167 -CYTKEEFQQAKELFSEYDHVFVDTAGRNFKDPQYIDELKETIPFESSIQSFLVLSATAKYEDMKHIVKRFSSVPVNQYI 245 (296)
T ss_dssp -CSSHHHHHHHHHHGGGSSEEEEECCCCCTTSHHHHHHHHHHSCCCTTEEEEEEEETTBCHHHHHHHTTTTSSSCCCEEE
T ss_pred -EECHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEE
T ss_conf -5556669999987224888999688843122217999999751316861699975787613599999996169998899
Q ss_pred EEECCCCCCCHHHCCCCCCCHHHHHHCCCEEE
Q ss_conf 95146544401000000010688851871687
Q gi|254780669|r 191 FCERGTSFGYNTLVTDMRSIPIMTSMGVPVIF 222 (301)
Q Consensus 191 lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~ 222 (301)
+|-=--+-.++.+ +.++.++++||.+
T Consensus 246 lTKLDet~~~G~~------l~~~~~~~lpi~~ 271 (296)
T 2px0_A 246 FTKIDETTSLGSV------FNILAESKIGVGF 271 (296)
T ss_dssp EECTTTCSCCHHH------HHHHHTCSCCCSE
T ss_pred EEEECCCCCHHHH------HHHHHHHCCCEEE
T ss_conf 9811499957799------9999998949799
No 262
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A*
Probab=20.61 E-value=40 Score=13.73 Aligned_cols=17 Identities=12% Similarity=0.421 Sum_probs=7.8
Q ss_pred HHHHHHHHCCEEEEECC
Q ss_conf 99886652876885228
Q gi|254780669|r 107 FRDLKKKYGFPILTDVH 123 (301)
Q Consensus 107 l~e~k~~~glpv~TeV~ 123 (301)
++...+.++.+++-=+.
T Consensus 127 ~k~~Q~~~~~~v~i~ia 143 (432)
T 2ip1_A 127 TKWLQEVFDVPLVIELT 143 (432)
T ss_dssp HHHHHHHHTCCEEEEEC
T ss_pred HHHHHHCCCCCEEEEEC
T ss_conf 99999767985058972
No 263
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II}
Probab=20.51 E-value=40 Score=13.72 Aligned_cols=17 Identities=12% Similarity=0.473 Sum_probs=6.8
Q ss_pred HHHHHHCCEEEEECCCH
Q ss_conf 88665287688522889
Q gi|254780669|r 109 DLKKKYGFPILTDVHTE 125 (301)
Q Consensus 109 e~k~~~glpv~TeV~~~ 125 (301)
...+.++.|++--+.+.
T Consensus 101 ~~q~~~~~~v~i~iaD~ 117 (393)
T 3hv0_A 101 YLQDTFKVPLVIQLTDD 117 (393)
T ss_dssp HHHHHHCCCEEEEECHH
T ss_pred HHHHCCCCCEEEEEECH
T ss_conf 99876698779998456
No 264
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=20.43 E-value=40 Score=13.71 Aligned_cols=217 Identities=14% Similarity=0.143 Sum_probs=114.1
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCC-----CCCCCC-CCCCCCHHHHHHHHHHHHHH-CCE
Q ss_conf 999548634999999999999999655339-9706601557688-----666322-24567124888999886652-876
Q gi|254780669|r 46 VLIAGPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKAN-----RSSLAG-KRGVGLKKGREIFRDLKKKY-GFP 117 (301)
Q Consensus 46 ~iIAGPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKan-----RtS~~s-frG~Gle~gL~il~e~k~~~-glp 117 (301)
.+.||= -+.+...++++.+.+.|.++. +|.=|. -+.|- +++..+ -.|.-+++.+++++++++++ ..|
T Consensus 22 y~taG~---P~~~~~~~~l~~l~~~GaD~iEiGiPfS--DP~aDGpvIq~a~~~al~~g~~~~~~~~~~~~~r~~~~~~p 96 (268)
T 1qop_A 22 FVTLGD---PGIEQSLKIIDTLIDAGADALELGVPFS--DPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIP 96 (268)
T ss_dssp EEETTS---SCHHHHHHHHHHHHHTTCSSEEEECCCS--CCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSC
T ss_pred EEECCC---CCHHHHHHHHHHHHHCCCCEEEECCCCC--CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 881707---9879999999999977999999789888--86544799999999999789867998767887653178877
Q ss_pred EEEE--------CCCHHHHHHHHHH-CCEEEECHHH-CCCHHHHHHHHHCCC-EEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 8852--------2889999876502-1578822576-289999999850597-799836777899999999999972587
Q gi|254780669|r 118 ILTD--------VHTEQQCEAIADS-VDILQIPALL-CRQTDLLTAAAQTGR-VINVKKGQFLSPWEMHNILQKLHAHGA 186 (301)
Q Consensus 118 v~Te--------V~~~~~~e~~~~~-vDilQIgA~~-~rqtdLl~a~a~t~k-pV~iKkgq~~s~~e~~~a~eki~~~Gn 186 (301)
++-= --....++.+.+. +|-+=||--- -...++..++.+.+. +|.+=-+ .++++.+ +.+.+...
T Consensus 97 lvlm~Y~N~i~~~G~~~f~~~~~~~Gv~GliipDlp~ee~~~~~~~~~~~~l~~I~lvaP--tt~~~ri---~~i~~~s~ 171 (268)
T 1qop_A 97 IGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPP--NADDDLL---RQVASYGR 171 (268)
T ss_dssp EEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECT--TCCHHHH---HHHHHHCC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEC--CCCHHHH---HHHHHCCC
T ss_conf 899985251123787899999997498666515888566699999997359826999826--8977889---99872598
Q ss_pred CCEEEE-ECCCCCCCHHHC-CCC-CCCHHHHHH-CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 808995-146544401000-000-010688851-8716871177742122345321263889999999999718988999
Q gi|254780669|r 187 KDVLFC-ERGTSFGYNTLV-TDM-RSIPIMTSM-GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFL 262 (301)
Q Consensus 187 ~~i~lc-ERG~~fgy~~lv-vD~-~~i~~lk~~-~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfi 262 (301)
.=|.+. -.|+| |-.+.. .++ ..+..+|+. ..||++---=+ .+|- ++.++..|+||+.+
T Consensus 172 gFiY~vs~~GvT-G~~~~~~~~~~~~i~~ik~~t~~Pv~vGFGI~-------------~~e~----v~~~~~~~ADGvVV 233 (268)
T 1qop_A 172 GYTYLLSRSGVT-GAENRGALPLHHLIEKLKEYHAAPALQGFGIS-------------SPEQ----VSAAVRAGAAGAIS 233 (268)
T ss_dssp SCEEEESSSSCC-CSSSCC--CCHHHHHHHHHTTCCCEEEESSCC-------------SHHH----HHHHHHTTCSEEEE
T ss_pred CEEEEEECCCCC-CCCCCCCHHHHHHHHHHHHCCCCCCEEEECCC-------------CHHH----HHHHHHCCCCEEEE
T ss_conf 647871034678-76543105689999999754688835761569-------------9999----99998638998998
Q ss_pred EECCCH--HHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 836983--347978201868899999999999
Q gi|254780669|r 263 ETHQDP--DNAPSDGPNMINIKDLPKLLSQLL 292 (301)
Q Consensus 263 E~Hp~P--~~AlsD~~q~l~l~~l~~ll~~l~ 292 (301)
=++--- ++...+..+ .++.+.+++++++
T Consensus 234 GSaiv~~i~~~~~~~~~--~~~~i~~~~~~lk 263 (268)
T 1qop_A 234 GSAIVKIIEKNLASPKQ--MLAELRSFVSAMK 263 (268)
T ss_dssp CHHHHHHHHHTTTCHHH--HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCHHH--HHHHHHHHHHHHH
T ss_conf 88999999862416899--9999999999999
No 265
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=20.40 E-value=40 Score=13.70 Aligned_cols=18 Identities=17% Similarity=0.086 Sum_probs=12.1
Q ss_pred HHHHHHHHCCCEEEEEEC
Q ss_conf 999999718988999836
Q gi|254780669|r 248 LAKAAVAIGIAGIFLETH 265 (301)
Q Consensus 248 la~aa~a~G~dGlfiE~H 265 (301)
+..+.+..|++|+.+|.-
T Consensus 237 ~l~~~~~~~~~giVl~g~ 254 (337)
T 4pga_A 237 AYKALAQNGAKALIHAGT 254 (337)
T ss_dssp HHHHHHHTTCSEEEEEEB
T ss_pred HHHHHHHCCCCEEEEECC
T ss_conf 999998779989999543
No 266
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=20.34 E-value=40 Score=13.69 Aligned_cols=148 Identities=14% Similarity=0.157 Sum_probs=74.8
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHCCE-
Q ss_conf 7069995486349999999999999996553399706601557688666322245671248889998866----52876-
Q gi|254780669|r 43 QRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKK----KYGFP- 117 (301)
Q Consensus 43 ~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~----~~glp- 117 (301)
++++++.||..+- ++- ++ +. .+.. . +.|+ .+-.++++++++ -+|.+
T Consensus 18 ~~~l~~PGP~~~~-~~V-~~------am----~~~~-------------~-~hr~---~ef~~i~~~~r~~L~~ll~~~~ 68 (396)
T 2ch1_A 18 EKIMMGPGPSNCS-KRV-LT------AM----TNTV-------------L-SNFH---AELFRTMDEVKDGLRYIFQTEN 68 (396)
T ss_dssp CCBCCSSSSCCCC-HHH-HH------HT----TSCC-------------C-CTTC---HHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCEECCCCCCC-HHH-HH------HH----CCCC-------------C-CCCC---HHHHHHHHHHHHHHHHHHCCCC
T ss_conf 6721008998898-999-99------73----7777-------------8-8788---9999999999999999958999
Q ss_pred ---EEEECCCHHHHHHHH-------HHCCEEEECHHHCCCHHHHHHHHHCCCEEEEEC---CCCCCHHHHHHHHHHHHHC
Q ss_conf ---885228899998765-------021578822576289999999850597799836---7778999999999999725
Q gi|254780669|r 118 ---ILTDVHTEQQCEAIA-------DSVDILQIPALLCRQTDLLTAAAQTGRVINVKK---GQFLSPWEMHNILQKLHAH 184 (301)
Q Consensus 118 ---v~TeV~~~~~~e~~~-------~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKk---gq~~s~~e~~~a~eki~~~ 184 (301)
++.-=..+.+.|.+. +.+.++.-|.|..+-.+.. .+.+..+.+-. +....+.+ ..+.....
T Consensus 69 ~~~i~~~gsgT~a~ea~~~nl~~~~~~~l~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 142 (396)
T 2ch1_A 69 RATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMS---ERYGADVRTIEGPPDRPFSLET---LARAIELH 142 (396)
T ss_dssp SCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHH---HHTTCEEEEEECCTTSCCCHHH---HHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH---HHHHHCCCCCCCCCCCCCCHHH---HHHHHHCC
T ss_conf 71999878189999999985066788587741576420126788---8765124333455678889899---99775126
Q ss_pred CCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHH
Q ss_conf 87808995146544401000000010688-851871687117774
Q gi|254780669|r 185 GAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSV 228 (301)
Q Consensus 185 Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~ 228 (301)
...-+.+++=-++.|.. .|...+..+ |+.+.++++|++++.
T Consensus 143 ~~~~v~~~~~~t~tg~~---~~i~~i~~~~k~~ga~~vvDavs~~ 184 (396)
T 2ch1_A 143 QPKCLFLTHGDSSSGLL---QPLEGVGQICHQHDCLLIVDAVASL 184 (396)
T ss_dssp CCSEEEEESEETTTTEE---CCCTTHHHHHHHTTCEEEEECTTTB
T ss_pred CCEEEEEEEEEECCCCC---CCHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 86299999776057545---7489999999862981899711244
Done!