RPSBLAST alignment of GI: 254780669 and protein with PDBid: 2qkf

>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate synthetase; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 kdops; 1.75A {Neisseria meningitidis serogroup B} PDB: 3fyo_A* 3fyp_A* 1phw_A* 1g7v_A* 1gg0_A 1phq_A* 1d9e_A* 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A* Length = 280
 Score =  145 bits (366), Expect = 9e-36
 Identities = 116/267 (43%), Positives = 164/267 (61%), Gaps = 2/267 (0%)

Query: 35  NQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAG 94
           N +T  N   FVL  G   +ES D           + + L I  ++K+SFDKANRSS+  
Sbjct: 6   NDITLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHS 65

Query: 95  KRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAA 154
            RGVGL++G +IF  +K ++G P++TDVH   QC+ +A+  D++Q+PA L RQTDL+ A 
Sbjct: 66  YRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEVCDVIQLPAFLARQTDLVVAM 125

Query: 155 AQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIP--I 212
           A+TG V+N+KK QFLSP +M NI++K H  G   ++ CERG+SFGY+ LV DM       
Sbjct: 126 AKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMK 185

Query: 213 MTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAP 272
            T   +PVIFD +HS+Q        SGG R   + LA A +A  +AG+FLE+H DP  A 
Sbjct: 186 QTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAK 245

Query: 273 SDGPNMINIKDLPKLLSQLLAIDKIIK 299
            DGP+ + +  L   L ++ A+D +IK
Sbjct: 246 CDGPSALPLHLLEDFLIRIKALDDLIK 272