HHsearch alignment for GI: 254780670 and conserved domain: cd03321
>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid. MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=99.61 E-value=1.5e-12 Score=113.21 Aligned_cols=283 Identities=24% Similarity=0.338 Sum_probs=186.9
Q ss_pred CEEEEEEEEEEE--------ECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 910589986886--------0797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREVI--------DSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~Il--------DSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
T Consensus 1 MkI~~Ie~~~~~iPl~~P~~~s~g~~~~~~~viV~v~td~G~~G~ge~~~------------------~~~~-~~~~~~~ 61 (355)
T cd03321 1 VLITGLRARAVNVPMQYPVHTSVGTVATAPLVLIDLATDEGVTGHSYLFT------------------YTPA-ALKSLKQ 61 (355)
T ss_pred CEEEEEEEEEEECCCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEECC------------------CCCC-HHHHHHH
T ss_conf 98969999999836888868978799999999999998999989994308------------------7732-4999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
T Consensus 62 ~~~~l~~~lig~~~~~~-~~~~~~~~~~~~~~~~g~~~~A~aaid~AlwDl~gK~~~~Pv~~LLGg~~~---~v~~~~s~ 137 (355)
T cd03321 62 LLDDMAALLVGEPLAPA-ELERALAKRFRLLGYTGLVRMAAAGIDMAAWDALAKVHGLPLAKLLGGNPR---PVQAYDSH 137 (355)
T ss_pred HHHHHHHHHCCCCCCHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC---CCEEEECC
T ss_conf 99999999779989849-999999997665033327889999999983569998849939999089987---50256236
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3664556776610256514887748999899999999999875200001---3676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
T Consensus 138 ~--------------------~~~~~~~~---~~a----~~~~-~~Gf~~~KiKvG-----~~~---~~~D~~~v-~~ir 180 (355)
T cd03321 138 G--------------------LDGAKLAT---ERA----VTAA-EEGFHAVKTKIG-----YPT---ADEDLAVV-RSIR 180 (355)
T ss_pred C--------------------CCCHHHHH---HHH----HHHH-HCCCCEEEEECC-----CCC---HHHHHHHH-HHHH
T ss_conf 7--------------------89999999---999----9999-759998999799-----999---89999999-9999
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
T Consensus 181 ~~---~g~~~~l~vDa----------------N~~~~~~~A~~~~~-~l~~~~~~~~EqP~~~~d~~~~~~l~~~~~--~ 238 (355)
T cd03321 181 QA---VGDGVGLMVDY----------------NQSLTVPEAIERGQ-ALDQEGLTWIEEPTLQHDYEGHARIASALR--T 238 (355)
T ss_pred HH---HCCCCEEEECC----------------CCCCCHHHHHHHHH-HHHHCCCCEEECCCCCCCHHHHHHHHHCCC--C
T ss_conf 97---19996597357----------------56768899999999-752305775537899889999999985489--9
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 85043000021488852100386522342545300389999999999987986999507888
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGE 367 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGE 367 (424)
T Consensus 239 pI~~~E~-~~~~~~~~~~i~~~a~d~~~~d~~~~GGit~~~kia~~A~~~gi~v~-~h~~~~ 298 (355)
T cd03321 239 PVQMGEN-WLGPEEMFKALSAGACDLVMPDLMKIGGVTGWLRASALAEQAGIPMS-SHLFQE 298 (355)
T ss_pred CEEECCC-CCCHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEE-CCCHHH
T ss_conf 9993788-89999999999849996103674520779999999999998599671-287899